AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0947100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0947100 MtrunA17_Chr5g0410681 97.778 90 2 0 56 145 118 207 6.65e-58 182
Msa0947100 MtrunA17_Chr3g0136661 53.750 80 36 1 66 145 116 194 3.37e-21 87.0
Msa0947100 MtrunA17_Chr6g0452121 87.500 40 5 0 57 96 4 43 6.87e-19 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0947100 AT1G32220.1 61.240 129 46 2 19 145 75 201 3.79e-47 154
Msa0947100 AT5G10730.1 49.367 79 39 1 66 144 117 194 2.44e-19 82.4
Msa0947100 AT5G15910.2 50.649 77 37 1 68 144 63 138 7.04e-18 77.4
Msa0947100 AT5G15910.1 50.649 77 37 1 68 144 104 179 8.95e-18 77.8

Find 89 sgRNAs with CRISPR-Local

Find 743 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGAGATCAATATGAATT+TGG 0.138307 6_3:-29605439 None:intergenic
TTTAAAATGGAAGTGTTAAT+TGG 0.162170 6_3:-29605848 None:intergenic
GGAAGTGTTAATTGGATTTC+AGG 0.162392 6_3:-29605840 None:intergenic
CTGATTTGGTCTTCACTATT+AGG 0.172065 6_3:+29606809 Msa0947100:three_prime_UTR
GTGACTCGATTGTGTGTTTA+AGG 0.185242 6_3:+29606771 Msa0947100:three_prime_UTR
CTCTAATTCTACTGCTAAAT+TGG 0.191909 6_3:-29606431 None:intergenic
GGGACTGTTATATGTGTTTC+AGG 0.193088 6_3:+29594948 Msa0947100:CDS
TTCTGAAAGAATAGGGAATT+TGG 0.232650 6_3:-29605541 None:intergenic
GAAAATACCTCGATTTAAAA+TGG 0.241903 6_3:-29605861 None:intergenic
TTTGTTTATTGCAGCAATTT+TGG 0.247478 6_3:+29603857 Msa0947100:intron
CTTTCTACTTGCTGTGATCA+TGG 0.290418 6_3:+29594729 Msa0947100:exon
GTCTCAACCCTCGGAGGTTT+TGG 0.299923 6_3:+29604858 Msa0947100:CDS
TTTGAGACGGAGGGATGATT+TGG 0.338071 6_3:+29606513 Msa0947100:three_prime_UTR
AAACCTTGGCCATGATGTTT+TGG 0.353953 6_3:+29606262 Msa0947100:three_prime_UTR
GGAATAAACTCTTCCAAAAC+TGG 0.355348 6_3:-29603924 None:intergenic
AACTGGGACGAAGTACTTCC+TGG 0.372764 6_3:+29604822 Msa0947100:CDS
TTCGTTGAAACGAAAAGGTC+TGG 0.378571 6_3:+29606295 Msa0947100:three_prime_UTR
CTTAGAACCTCTCTCCTTTG+TGG 0.386335 6_3:+29605770 Msa0947100:three_prime_UTR
AATTCAGATTGGTACTCATT+TGG 0.387213 6_3:+29594512 Msa0947100:five_prime_UTR
ACTGAGATCAATATGAATTT+GGG 0.389375 6_3:-29605438 None:intergenic
CACTCAGATTCTGAAAGAAT+AGG 0.389610 6_3:-29605549 None:intergenic
ATTGTTTGCAGCTGCTGCAC+TGG 0.391528 6_3:-29606400 None:intergenic
TATGCTTAGTGGCTGGTCTT+TGG 0.392106 6_3:+29606149 Msa0947100:three_prime_UTR
TTTCTACTTGCTGTGATCAT+GGG 0.393138 6_3:+29594730 Msa0947100:exon
GTGAATTTGCAGAGTATTGA+AGG 0.399588 6_3:+29594909 Msa0947100:CDS
GTAAATGCTGCAAACGAATA+TGG 0.416823 6_3:+29604930 Msa0947100:CDS
CTTTCATTGGGGTACTTCAC+AGG 0.419164 6_3:+29605489 Msa0947100:CDS
ACTCAGATTCTGAAAGAATA+GGG 0.420667 6_3:-29605548 None:intergenic
TTGAGCTAAGCAAAATAAAC+AGG 0.423378 6_3:+29593939 Msa0947100:five_prime_UTR
AGGTTTCTTTCGTATTGTGC+AGG 0.427728 6_3:+29606218 Msa0947100:three_prime_UTR
TGCTGAGATATGCACTGATT+TGG 0.434101 6_3:+29606795 Msa0947100:three_prime_UTR
CACAAGAAGGTTTGAAAGGA+TGG 0.446981 6_3:-29605747 None:intergenic
TCTTTCAGAATCTGAGTGAA+TGG 0.452610 6_3:+29605554 Msa0947100:exon
GACAGGAATAGAAGGCTGTA+AGG 0.455272 6_3:-29594701 None:intergenic
CGATGGACTAAGCCAGCAAA+TGG 0.463487 6_3:+29606459 Msa0947100:three_prime_UTR
TAACCACATTTCTTCTTCAA+AGG 0.467136 6_3:-29603945 None:intergenic
GAAGTGTTAATTGGATTTCA+GGG 0.471856 6_3:-29605839 None:intergenic
CATATTTCTGCTCCACTCCA+AGG 0.478058 6_3:-29605805 None:intergenic
TCTTATGGAGAAATTCAGAT+TGG 0.499128 6_3:+29594501 Msa0947100:five_prime_UTR
AAGGTAAAGACAGGAATAGA+AGG 0.505628 6_3:-29594709 None:intergenic
GAGACAACTGCAGTAGCTCC+AGG 0.506633 6_3:-29604840 None:intergenic
ATGGCTTCGTTGAAACGAAA+AGG 0.508337 6_3:+29606290 Msa0947100:three_prime_UTR
TGCAGATGAAGTATGCTTAG+TGG 0.508903 6_3:+29606138 Msa0947100:three_prime_UTR
GCAAGTAGAAAGGTAAAGAC+AGG 0.516027 6_3:-29594718 None:intergenic
TTCTACTTGCTGTGATCATG+GGG 0.517355 6_3:+29594731 Msa0947100:exon
ACTAATAAGCATGAAGCAAG+AGG 0.519062 6_3:+29606644 Msa0947100:three_prime_UTR
ATTGAAGGTCTGACAAAGGT+TGG 0.527454 6_3:+29594924 Msa0947100:CDS
GCATGAAGCAAGAGGGTGAT+GGG 0.528389 6_3:+29606652 Msa0947100:three_prime_UTR
AATTCTACTGCTAAATTGGT+CGG 0.542804 6_3:-29606427 None:intergenic
GAACAAATGAGTAAGATTAA+CGG 0.549035 6_3:+29604888 Msa0947100:CDS
TGTAAGGCAGAGGCATAAGT+TGG 0.550513 6_3:-29594685 None:intergenic
TAAGCACAAGAAGGTTTGAA+AGG 0.552078 6_3:-29605751 None:intergenic
TATGCAGGATTTGAAAACCT+TGG 0.552274 6_3:+29606248 Msa0947100:three_prime_UTR
GGTTTCTTTCGTATTGTGCA+GGG 0.552344 6_3:+29606219 Msa0947100:three_prime_UTR
TCGTTGAAACGAAAAGGTCT+GGG 0.554472 6_3:+29606296 Msa0947100:three_prime_UTR
CATGATCACAGCAAGTAGAA+AGG 0.554816 6_3:-29594728 None:intergenic
GAGAGGTTCTAAGCACAAGA+AGG 0.561068 6_3:-29605760 None:intergenic
AATAGAAGGCTGTAAGGCAG+AGG 0.568145 6_3:-29594695 None:intergenic
GCACAATACGAAAGAAACCT+TGG 0.571154 6_3:-29606215 None:intergenic
TGTGGTGACATTGCAAACCT+TGG 0.571436 6_3:+29605788 Msa0947100:three_prime_UTR
ACTGCAGTTGTCTCAACCCT+CGG 0.574479 6_3:+29604849 Msa0947100:CDS
CGTGTGAAGTGCTATCTGAT+TGG 0.576364 6_3:+29606358 Msa0947100:three_prime_UTR
AGCATGAAGCAAGAGGGTGA+TGG 0.592902 6_3:+29606651 Msa0947100:three_prime_UTR
GAAGGTCTGACAAAGGTTGG+AGG 0.595901 6_3:+29594927 Msa0947100:CDS
ATTCCTTTGAAGAAGAAATG+TGG 0.598289 6_3:+29603942 Msa0947100:CDS
GATGAAGTATGCTTAGTGGC+TGG 0.599339 6_3:+29606142 Msa0947100:three_prime_UTR
CCATATGCACCAAAACATCA+TGG 0.601139 6_3:-29606271 None:intergenic
TGTGCAGGGACTGAATATGC+AGG 0.602414 6_3:+29606233 Msa0947100:three_prime_UTR
AAGGTCTGACAAAGGTTGGA+GGG 0.606437 6_3:+29594928 Msa0947100:CDS
GCACCAAAACATCATGGCCA+AGG 0.608013 6_3:-29606265 None:intergenic
AGCAAAATAAACAGGAGCAG+AGG 0.611854 6_3:+29593947 Msa0947100:five_prime_UTR
CTCGCTACCAAAACCTCCGA+GGG 0.612537 6_3:-29604865 None:intergenic
TAACGGCGAGGCTAATGTTG+TGG 0.613394 6_3:+29604905 Msa0947100:CDS
ATATGCTGAATTTCATCATG+AGG 0.622047 6_3:+29606176 Msa0947100:three_prime_UTR
TAAATATGTATACCTCTACA+TGG 0.627927 6_3:-29593980 None:intergenic
TACTCAAGGAGAGTTCATCA+AGG 0.638404 6_3:+29606557 Msa0947100:three_prime_UTR
CTAATAAGCATGAAGCAAGA+GGG 0.643567 6_3:+29606645 Msa0947100:three_prime_UTR
CCTCGCTACCAAAACCTCCG+AGG 0.646053 6_3:-29604866 None:intergenic
ACTGCTGCATCTTATGCTAG+AGG 0.647560 6_3:+29594536 Msa0947100:five_prime_UTR
TAGCGTGTAAGAAATACTCA+AGG 0.649858 6_3:+29606543 Msa0947100:three_prime_UTR
GGCAGAACACAACCATGTAG+AGG 0.661081 6_3:+29593968 Msa0947100:five_prime_UTR
GAGTATTGAAGGTCTGACAA+AGG 0.665643 6_3:+29594920 Msa0947100:CDS
AATGTCACCACAAAGGAGAG+AGG 0.667419 6_3:-29605777 None:intergenic
TGACATTGCAAACCTTGGAG+TGG 0.676813 6_3:+29605793 Msa0947100:three_prime_UTR
GTAGAATTAGAGTTCGACGA+TGG 0.679540 6_3:+29606442 Msa0947100:three_prime_UTR
GGTTTGCAATGTCACCACAA+AGG 0.687980 6_3:-29605784 None:intergenic
GCAGTTGTCTCAACCCTCGG+AGG 0.692364 6_3:+29604852 Msa0947100:CDS
AATGAGTAAGATTAACGGCG+AGG 0.694649 6_3:+29604893 Msa0947100:CDS
GCTAAAATACAATGTCGACA+TGG 0.704540 6_3:+29606485 Msa0947100:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGTGAATATATAATAATA+AGG - chr6_3:29596661-29596680 None:intergenic 10.0%
!!! TAATATTTTGATATTGTATA+AGG + chr6_3:29599135-29599154 Msa0947100:intron 10.0%
!!! ATTAAACATAAATATTTTCA+AGG - chr6_3:29599632-29599651 None:intergenic 10.0%
!! TGTGAATATATATAATAATA+AGG + chr6_3:29600710-29600729 Msa0947100:intron 10.0%
!! TTAACATAGATATAAATATT+AGG - chr6_3:29603173-29603192 None:intergenic 10.0%
!! ATTGTGAATATATAATAATA+AGG - chr6_3:29596661-29596680 None:intergenic 10.0%
!! GAAAGAAAAAAAAAATCAAA+TGG + chr6_3:29594427-29594446 Msa0947100:intron 15.0%
!!! GATTTGAATTTAATTTGATT+TGG + chr6_3:29595063-29595082 Msa0947100:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG - chr6_3:29601640-29601659 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG - chr6_3:29601639-29601658 None:intergenic 15.0%
!! TTAATATTATAAACAATGAG+CGG + chr6_3:29595826-29595845 Msa0947100:intron 15.0%
!! ATTAGGAGTAATATTTATAT+TGG - chr6_3:29596381-29596400 None:intergenic 15.0%
!! TTCACATAGATATAAATATT+AGG - chr6_3:29596398-29596417 None:intergenic 15.0%
!! ATATTGAGTTAATATTTGAT+TGG - chr6_3:29600589-29600608 None:intergenic 15.0%
!! AATATTAACTCAATATCTAT+TGG + chr6_3:29596784-29596803 Msa0947100:intron 15.0%
!!! AACTTAATATTTTGAATTGA+AGG - chr6_3:29598216-29598235 None:intergenic 15.0%
!! TATTGTATAAGGAATTAATT+TGG + chr6_3:29599146-29599165 Msa0947100:intron 15.0%
!! TAATTTATTTAATTGGAGAA+AGG + chr6_3:29599652-29599671 Msa0947100:intron 15.0%
!!! TAATTAAATCTGCTTTATTT+AGG - chr6_3:29599799-29599818 None:intergenic 15.0%
!! ATATTGAGTTAATATTTGAT+TGG + chr6_3:29600589-29600608 Msa0947100:intron 15.0%
!! TATACATAGGTATAAATATT+AGG + chr6_3:29600972-29600991 Msa0947100:intron 15.0%
!! ATACATAGGTATAAATATTA+GGG + chr6_3:29600973-29600992 Msa0947100:intron 15.0%
!! TTAATATTATAAACAATGAG+CGG - chr6_3:29595826-29595845 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG + chr6_3:29601639-29601658 Msa0947100:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG + chr6_3:29601640-29601659 Msa0947100:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG - chr6_3:29601640-29601659 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG - chr6_3:29601639-29601658 None:intergenic 15.0%
!! TTAATATTATAAACAATGAG+CGG + chr6_3:29595826-29595845 Msa0947100:intron 15.0%
!! ATTAGGAGTAATATTTATAT+TGG - chr6_3:29596381-29596400 None:intergenic 15.0%
!! TATATAGTGAATTAATTGAT+AGG + chr6_3:29604299-29604318 Msa0947100:intron 15.0%
!!! TTTAACTCAAATTTTCTTAA+TGG - chr6_3:29604701-29604720 None:intergenic 15.0%
!! AGGATAATCATAAAAATTAA+TGG + chr6_3:29606829-29606848 Msa0947100:three_prime_UTR 15.0%
!!! AACTTCATTTTATAAACACA+TGG + chr6_3:29594102-29594121 Msa0947100:intron 20.0%
!!! CATAACATATTTTCTTCATA+AGG - chr6_3:29594300-29594319 None:intergenic 20.0%
!! CTTATGAAGAAAATATGTTA+TGG + chr6_3:29594298-29594317 Msa0947100:intron 20.0%
!!! TACATGTGTTTTATATGATA+AGG + chr6_3:29594395-29594414 Msa0947100:intron 20.0%
!! AATAGCAATTTATAAATCTG+AGG - chr6_3:29594584-29594603 None:intergenic 20.0%
!!! AATTGTTGTTGAATTTCATT+AGG + chr6_3:29595031-29595050 Msa0947100:intron 20.0%
!!! ATTGTTGTTGAATTTCATTA+GGG + chr6_3:29595032-29595051 Msa0947100:intron 20.0%
!! TTTGAACATCAACAAAATTA+AGG - chr6_3:29595271-29595290 None:intergenic 20.0%
!! ATAAGTATGACTTATATAAG+GGG - chr6_3:29601641-29601660 None:intergenic 20.0%
!! ATAAACATTGATCTATACAA+GGG - chr6_3:29601380-29601399 None:intergenic 20.0%
!! TATAAACATTGATCTATACA+AGG - chr6_3:29601379-29601398 None:intergenic 20.0%
!! ATTCGTTATTCAGTATATTT+CGG - chr6_3:29601346-29601365 None:intergenic 20.0%
!! ACTAAGTCAATATAAGATAT+TGG - chr6_3:29601319-29601338 None:intergenic 20.0%
!!! TATCTTATATTGACTTAGTT+CGG + chr6_3:29596052-29596071 Msa0947100:intron 20.0%
!! AATAGTTTCCTTATGTTTAA+CGG + chr6_3:29596538-29596557 Msa0947100:intron 20.0%
!! AAAGTATACATTTGAATCAT+TGG + chr6_3:29596939-29596958 Msa0947100:intron 20.0%
!! GATGTCAAATATAAATGATT+TGG - chr6_3:29597081-29597100 None:intergenic 20.0%
!!! TATGAAATTTGTAAAAGTAC+AGG - chr6_3:29600242-29600261 None:intergenic 20.0%
!!! TGTACTTTTACAAATTTCAT+AGG + chr6_3:29597130-29597149 Msa0947100:intron 20.0%
!!! AATCAATTTTGGTACATATT+AGG + chr6_3:29597332-29597351 Msa0947100:intron 20.0%
!!! CATGTATAGATAAATTGTTT+TGG + chr6_3:29597378-29597397 Msa0947100:intron 20.0%
!! TACAAAATTCATGTATGAAT+TGG - chr6_3:29597549-29597568 None:intergenic 20.0%
!! ATGTATTTGACATATATGTA+GGG - chr6_3:29597610-29597629 None:intergenic 20.0%
!! TATGTATTTGACATATATGT+AGG - chr6_3:29597611-29597630 None:intergenic 20.0%
!! ATATGTCAAATACATATACA+AGG + chr6_3:29597615-29597634 Msa0947100:intron 20.0%
!! TATTGTATAATGCAAATTCT+AGG - chr6_3:29597678-29597697 None:intergenic 20.0%
!! ATTATACAATAATGACAAGT+GGG + chr6_3:29597687-29597706 Msa0947100:intron 20.0%
!! ATTTAACCAATATCCATATA+TGG + chr6_3:29597881-29597900 Msa0947100:intron 20.0%
!!! ATTAGTTTAGATTCTCTTAT+TGG + chr6_3:29598052-29598071 Msa0947100:intron 20.0%
!! TAATAAAAGTGACATGATTA+TGG - chr6_3:29598105-29598124 None:intergenic 20.0%
!! ATAAATTTAGAAGCAATGTT+TGG + chr6_3:29598405-29598424 Msa0947100:intron 20.0%
!! TAAATTTAGAAGCAATGTTT+GGG + chr6_3:29598406-29598425 Msa0947100:intron 20.0%
!!! ATTTGTTTTGAGTAAAATAG+TGG + chr6_3:29598629-29598648 Msa0947100:intron 20.0%
!!! TTTGTTTTGAGTAAAATAGT+GGG + chr6_3:29598630-29598649 Msa0947100:intron 20.0%
!! TATACTGTTAAAAGTTCTTA+TGG + chr6_3:29598753-29598772 Msa0947100:intron 20.0%
!! CAAATGAGTAGAATTAAAAT+TGG + chr6_3:29598928-29598947 Msa0947100:intron 20.0%
!!! TCAGATATGATTTTTGAATT+TGG + chr6_3:29599716-29599735 Msa0947100:intron 20.0%
!! GATGTCAAATATATATGATT+TGG + chr6_3:29600292-29600311 Msa0947100:intron 20.0%
!! AAAGTATACATTTGGATTAT+TGG - chr6_3:29600430-29600449 None:intergenic 20.0%
!!! TCAATATTGATTGGATATTA+GGG - chr6_3:29600648-29600667 None:intergenic 20.0%
!!! ATCAATATTGATTGGATATT+AGG - chr6_3:29600649-29600668 None:intergenic 20.0%
!! TACATAGGTATAAATATTAG+GGG + chr6_3:29600974-29600993 Msa0947100:intron 20.0%
!!! TATCTTATATTGACTTAGTT+CGG - chr6_3:29596052-29596071 None:intergenic 20.0%
!! ACTAAGTCAATATAAGATAT+TGG + chr6_3:29601319-29601338 Msa0947100:intron 20.0%
!! ATTCGTTATTCAGTATATTT+CGG + chr6_3:29601346-29601365 Msa0947100:intron 20.0%
!! TATAAACATTGATCTATACA+AGG + chr6_3:29601379-29601398 Msa0947100:intron 20.0%
!! ATAAACATTGATCTATACAA+GGG + chr6_3:29601380-29601399 Msa0947100:intron 20.0%
!! ATAAGTATGACTTATATAAG+GGG + chr6_3:29601641-29601660 Msa0947100:intron 20.0%
!! ATAAGTATGACTTATATAAG+GGG - chr6_3:29601641-29601660 None:intergenic 20.0%
!! ATAAACATTGATCTATACAA+GGG - chr6_3:29601380-29601399 None:intergenic 20.0%
!! TATAAACATTGATCTATACA+AGG - chr6_3:29601379-29601398 None:intergenic 20.0%
!! ATTCGTTATTCAGTATATTT+CGG - chr6_3:29601346-29601365 None:intergenic 20.0%
!!! TATCTTATATTGACTTAGTT+CGG + chr6_3:29596052-29596071 Msa0947100:intron 20.0%
!! AATATAACTGTAAAATTGCA+TGG - chr6_3:29602858-29602877 None:intergenic 20.0%
!! AATAGTTTCCTTATGTTTAA+CGG + chr6_3:29596538-29596557 Msa0947100:intron 20.0%
!! AATGCAAAACATTAATATCT+AGG - chr6_3:29603585-29603604 None:intergenic 20.0%
!! AATGCATTTATATTGATATG+TGG + chr6_3:29603676-29603695 Msa0947100:intron 20.0%
!!! AAAGGTATCATAAAATCATT+GGG - chr6_3:29603758-29603777 None:intergenic 20.0%
!!! AAAAGGTATCATAAAATCAT+TGG - chr6_3:29603759-29603778 None:intergenic 20.0%
!! TTGAATAAAGTTATCAACTT+TGG + chr6_3:29603797-29603816 Msa0947100:intron 20.0%
!! AACACAACAATAAAATTTCA+AGG - chr6_3:29604038-29604057 None:intergenic 20.0%
!!! TTGTTGTGTTTATGATTTTA+TGG + chr6_3:29604048-29604067 Msa0947100:intron 20.0%
!!! TTATGATTTTATGGTAAGAT+CGG + chr6_3:29604057-29604076 Msa0947100:intron 20.0%
!! GAGAATATAGAAGAAAATTA+AGG + chr6_3:29604128-29604147 Msa0947100:intron 20.0%
!! TACAATTTAGTTAGTTAGTT+AGG - chr6_3:29604402-29604421 None:intergenic 20.0%
!!! AGATGTTTTTTATGTAAACT+GGG + chr6_3:29604806-29604825 Msa0947100:CDS 20.0%
!! ACAAAAATGTAAAGAAACAT+TGG - chr6_3:29605242-29605261 None:intergenic 20.0%
!!! ATGTTTCTTTACATTTTTGT+TGG + chr6_3:29605242-29605261 Msa0947100:intron 20.0%
!! TGTATATATACAAACAAAGA+TGG + chr6_3:29605271-29605290 Msa0947100:intron 20.0%
!! TATATGATGTATATTATGTC+TGG + chr6_3:29605311-29605330 Msa0947100:intron 20.0%
!! ATATGATGTATATTATGTCT+GGG + chr6_3:29605312-29605331 Msa0947100:intron 20.0%
!!! CAGTGATTATTTTTTTACAT+AGG - chr6_3:29605581-29605600 None:intergenic 20.0%
!! TGTTGTACTAACAAAAAAAA+AGG + chr6_3:29605622-29605641 Msa0947100:three_prime_UTR 20.0%
!!! TTTAAAATGGAAGTGTTAAT+TGG - chr6_3:29605851-29605870 None:intergenic 20.0%
!! ATTTAGTTGTTACATAGAAT+AGG - chr6_3:29606068-29606087 None:intergenic 20.0%
! TAAATATGTATACCTCTACA+TGG - chr6_3:29593983-29594002 None:intergenic 25.0%
! ATTCTTGGATTCAAGAAATT+TGG - chr6_3:29594243-29594262 None:intergenic 25.0%
!!! TGTAATTCTTTGAAATACCA+AGG - chr6_3:29594273-29594292 None:intergenic 25.0%
!!! TTATGGAGATTATTTTGTCT+TGG + chr6_3:29594315-29594334 Msa0947100:intron 25.0%
! TGATTTATGATCAGGATATT+TGG + chr6_3:29594622-29594641 Msa0947100:intron 25.0%
! ATATGTGTGCTACAAAAAAA+TGG - chr6_3:29594838-29594857 None:intergenic 25.0%
! ACAAGTGAAACACAAAATTA+GGG - chr6_3:29595102-29595121 None:intergenic 25.0%
! AAAATCATGAAGAATCATGA+AGG + chr6_3:29595139-29595158 Msa0947100:intron 25.0%
! TTTAAAAACTAAACTTTCCG+AGG + chr6_3:29595220-29595239 Msa0947100:intron 25.0%
! AAGTTCTATAAATAGAACTC+TGG - chr6_3:29601764-29601783 None:intergenic 25.0%
! AAATTACTAAACTCGTTGTT+GGG - chr6_3:29601696-29601715 None:intergenic 25.0%
! AAAATTACTAAACTCGTTGT+TGG - chr6_3:29601695-29601714 None:intergenic 25.0%
! CAATAAATATATCGAGACAA+AGG - chr6_3:29595944-29595963 None:intergenic 25.0%
! AATATGACTGTAAAATTGCA+TGG - chr6_3:29601287-29601306 None:intergenic 25.0%
! TAAACAGGAGATATATCTTT+AGG - chr6_3:29601253-29601272 None:intergenic 25.0%
! TTCTCAATAAAGTTTGACTA+CGG + chr6_3:29596505-29596524 Msa0947100:intron 25.0%
! ATAGTTTCCTTATGTTTAAC+GGG + chr6_3:29596539-29596558 Msa0947100:intron 25.0%
! ATACTTAATGTTCCATCAAA+CGG + chr6_3:29596578-29596597 Msa0947100:intron 25.0%
! ATTTATTCCAAATTACGATC+TGG + chr6_3:29597170-29597189 Msa0947100:intron 25.0%
!!! AATGATGTTGACTTTCATAT+AGG - chr6_3:29597208-29597227 None:intergenic 25.0%
! AATATCCTTGGATATCTTAA+AGG - chr6_3:29597283-29597302 None:intergenic 25.0%
!! TCGAACACTATAATCAATTT+TGG + chr6_3:29597321-29597340 Msa0947100:intron 25.0%
! CATTATACAATAATGACAAG+TGG + chr6_3:29597686-29597705 Msa0947100:intron 25.0%
! ATCATTATGCATGTTATGAT+TGG + chr6_3:29598132-29598151 Msa0947100:intron 25.0%
! TATATATGATATATAAGCCG+TGG + chr6_3:29598163-29598182 Msa0947100:intron 25.0%
!!! ATTTCGATATTAGTCTTGAA+GGG - chr6_3:29598262-29598281 None:intergenic 25.0%
! CTATATGATAGATTAGAGTA+AGG + chr6_3:29598434-29598453 Msa0947100:intron 25.0%
! AAAGTTGTATGAGATACAAT+TGG + chr6_3:29598479-29598498 Msa0947100:intron 25.0%
! TACTCAAAACTCAGTTATTT+AGG - chr6_3:29598517-29598536 None:intergenic 25.0%
! ATTACCTTCAACATTTGAAT+CGG - chr6_3:29598611-29598630 None:intergenic 25.0%
!! ATATCGATTATACATATCGA+CGG + chr6_3:29599027-29599046 Msa0947100:intron 25.0%
! TAACAATTGTTTGTTCAGTA+TGG - chr6_3:29599421-29599440 None:intergenic 25.0%
! TGATGTTTGATTGTTGTATT+AGG + chr6_3:29599448-29599467 Msa0947100:intron 25.0%
!! ATACAAGCGTTGTATTATTA+TGG + chr6_3:29599481-29599500 Msa0947100:intron 25.0%
! TGTTTCCAAAACAAATTACA+GGG - chr6_3:29599767-29599786 None:intergenic 25.0%
! TTGTTTCCAAAACAAATTAC+AGG - chr6_3:29599768-29599787 None:intergenic 25.0%
!! CATGTGTAGATAAATTGTTT+TGG - chr6_3:29599995-29600014 None:intergenic 25.0%
! ATTTGTACCAAAATTGATTG+TGG + chr6_3:29600042-29600061 Msa0947100:intron 25.0%
!! TAAGGATTGTTTCTTGAAAA+CGG + chr6_3:29600115-29600134 Msa0947100:intron 25.0%
!!! AATGATGCTGACTTTAATAT+CGG + chr6_3:29600165-29600184 Msa0947100:intron 25.0%
! ATTTATTCCAAATTGCGATT+TGG - chr6_3:29600203-29600222 None:intergenic 25.0%
! TAGAAACAACAACTATTTGA+AGG - chr6_3:29600267-29600286 None:intergenic 25.0%
! TGATACTATTCTAGTAGATA+AGG - chr6_3:29600531-29600550 None:intergenic 25.0%
! CAAACTCAATCAATATTGAT+TGG - chr6_3:29600657-29600676 None:intergenic 25.0%
!! CAATCAATATTGATTGAGTT+TGG + chr6_3:29600655-29600674 Msa0947100:intron 25.0%
! AGAATAGATAGTTCATGTAA+TGG + chr6_3:29600778-29600797 Msa0947100:intron 25.0%
! TTCATATTAAAGCTTGACTA+TGG - chr6_3:29600866-29600885 None:intergenic 25.0%
!! AGTCAAGCTTTAATATGAAT+TGG + chr6_3:29600867-29600886 Msa0947100:intron 25.0%
!! GTCAAGCTTTAATATGAATT+GGG + chr6_3:29600868-29600887 Msa0947100:intron 25.0%
! GAGATATTAAGTCTATACAT+AGG + chr6_3:29600959-29600978 Msa0947100:intron 25.0%
! ATTAGGGGTAATATTTATAC+TGG + chr6_3:29600989-29601008 Msa0947100:intron 25.0%
! TAAACAGGAGATATATCTTT+AGG + chr6_3:29601253-29601272 Msa0947100:intron 25.0%
! AATATGACTGTAAAATTGCA+TGG + chr6_3:29601287-29601306 Msa0947100:intron 25.0%
! AAAATTACTAAACTCGTTGT+TGG + chr6_3:29601695-29601714 Msa0947100:intron 25.0%
! AAATTACTAAACTCGTTGTT+GGG + chr6_3:29601696-29601715 Msa0947100:intron 25.0%
! AAGTTCTATAAATAGAACTC+TGG + chr6_3:29601764-29601783 Msa0947100:intron 25.0%
!! AATTTTCGATTTTCATTCCT+TGG - chr6_3:29602023-29602042 None:intergenic 25.0%
!!! GAATTTTGATTTTCTTTCCT+TGG + chr6_3:29602150-29602169 Msa0947100:intron 25.0%
! AAGTTCTATAAATAGAACTC+TGG - chr6_3:29601764-29601783 None:intergenic 25.0%
! AAATTACTAAACTCGTTGTT+GGG - chr6_3:29601696-29601715 None:intergenic 25.0%
! AAAATTACTAAACTCGTTGT+TGG - chr6_3:29601695-29601714 None:intergenic 25.0%
! CAATAAATATATCGAGACAA+AGG - chr6_3:29595944-29595963 None:intergenic 25.0%
! TACAGTTATATTTCATCAAG+AGG + chr6_3:29602866-29602885 Msa0947100:intron 25.0%
! TAAACAGGAGATATATCTTT+AGG - chr6_3:29601253-29601272 None:intergenic 25.0%
! TTCTCAATAAAGTTTGACTA+CGG + chr6_3:29596505-29596524 Msa0947100:intron 25.0%
! ATAGTTTCCTTATGTTTAAC+GGG + chr6_3:29596539-29596558 Msa0947100:intron 25.0%
! CTATTAGTTAAACACATGTT+TGG - chr6_3:29603545-29603564 None:intergenic 25.0%
!! ATGTTTTGCATTTTTGTGAT+TGG + chr6_3:29603593-29603612 Msa0947100:intron 25.0%
!! TACCTTTTGAATTTTTGATG+TGG + chr6_3:29603771-29603790 Msa0947100:intron 25.0%
!! ACCTTTTGAATTTTTGATGT+GGG + chr6_3:29603772-29603791 Msa0947100:intron 25.0%
!!! TTTGGAGTTTTTGATTCAAT+GGG + chr6_3:29603815-29603834 Msa0947100:intron 25.0%
!! TTTGTTTATTGCAGCAATTT+TGG + chr6_3:29603857-29603876 Msa0947100:intron 25.0%
!! TAAAAATTTTGTGCCAGTTT+TGG + chr6_3:29603911-29603930 Msa0947100:CDS 25.0%
! AAATTTCGTGTGATGTATAA+TGG + chr6_3:29604166-29604185 Msa0947100:intron 25.0%
!! TGACTGAGATTTTGTTAAAA+TGG + chr6_3:29604594-29604613 Msa0947100:intron 25.0%
!! CTCAAATTTTCTTAATGGTT+TGG - chr6_3:29604696-29604715 None:intergenic 25.0%
!!! GAGATGTTTTTTATGTAAAC+TGG + chr6_3:29604805-29604824 Msa0947100:CDS 25.0%
! GAACAAATGAGTAAGATTAA+CGG + chr6_3:29604888-29604907 Msa0947100:CDS 25.0%
! TGCTTATATATGACAGTTAA+TGG - chr6_3:29605059-29605078 None:intergenic 25.0%
! AAGTTGAATGTTTACAGATA+TGG + chr6_3:29605136-29605155 Msa0947100:intron 25.0%
! AAATGTAAAGAAACATTGGA+AGG - chr6_3:29605238-29605257 None:intergenic 25.0%
! ACTGAGATCAATATGAATTT+GGG - chr6_3:29605441-29605460 None:intergenic 25.0%
! AACTGAGATCAATATGAATT+TGG - chr6_3:29605442-29605461 None:intergenic 25.0%
! GAAAATACCTCGATTTAAAA+TGG - chr6_3:29605864-29605883 None:intergenic 25.0%
! AAAAACAGAACACAAGAAAA+AGG - chr6_3:29605930-29605949 None:intergenic 25.0%
!! ATTTTTCATGTCCATATTAC+AGG + chr6_3:29606024-29606043 Msa0947100:intron 25.0%
!! TTTTTCATGTCCATATTACA+GGG + chr6_3:29606025-29606044 Msa0947100:intron 25.0%
!!! GCTTTTTTGAATTTTTACTC+TGG + chr6_3:29606617-29606636 Msa0947100:three_prime_UTR 25.0%
! GTTTTTCTCTACTATGTTGT+AGG + chr6_3:29593904-29593923 Msa0947100:five_prime_UTR 30.0%
TTGAGCTAAGCAAAATAAAC+AGG + chr6_3:29593939-29593958 Msa0947100:five_prime_UTR 30.0%
ACATACTCATCAAATAGTGA+AGG - chr6_3:29594079-29594098 None:intergenic 30.0%
TTTACTAAAGCCGAAATTGT+TGG + chr6_3:29594130-29594149 Msa0947100:intron 30.0%
!! TCAAGAAATTTGGTTTGGTT+TGG - chr6_3:29594233-29594252 None:intergenic 30.0%
TGGATTCAAGAAATTTGGTT+TGG - chr6_3:29594238-29594257 None:intergenic 30.0%
!! TCTTTGAAATACCAAGGAAA+TGG - chr6_3:29594267-29594286 None:intergenic 30.0%
! TGTTACTGATTGCAAATTGA+GGG + chr6_3:29594344-29594363 Msa0947100:intron 30.0%
CATGTACATTTAGAAATCTG+AGG - chr6_3:29594460-29594479 None:intergenic 30.0%
! CATGTGTTTTACAATTTTGC+AGG + chr6_3:29594476-29594495 Msa0947100:intron 30.0%
! ACAATTTTGCAGGTTTCTTA+TGG + chr6_3:29594486-29594505 Msa0947100:intron 30.0%
TCTTATGGAGAAATTCAGAT+TGG + chr6_3:29594501-29594520 Msa0947100:five_prime_UTR 30.0%
AATTCAGATTGGTACTCATT+TGG + chr6_3:29594512-29594531 Msa0947100:five_prime_UTR 30.0%
CCTGATCATAAATCAATAGA+GGG - chr6_3:29594617-29594636 None:intergenic 30.0%
TCCTGATCATAAATCAATAG+AGG - chr6_3:29594618-29594637 None:intergenic 30.0%
!! ACCTAACTGTTGTTTCTTTA+TGG + chr6_3:29594646-29594665 Msa0947100:intron 30.0%
ACCATAAAGAAACAACAGTT+AGG - chr6_3:29594650-29594669 None:intergenic 30.0%
!! CTGTTGTTTCTTTATGGTTT+AGG + chr6_3:29594652-29594671 Msa0947100:intron 30.0%
CACACATATGCATAAAGTAA+TGG + chr6_3:29594849-29594868 Msa0947100:intron 30.0%
!! TGTTTCAGGTTCCATATTTA+TGG + chr6_3:29594962-29594981 Msa0947100:intron 30.0%
GCGATACAAAACCATAAATA+TGG - chr6_3:29594976-29594995 None:intergenic 30.0%
CACAAGTGAAACACAAAATT+AGG - chr6_3:29595103-29595122 None:intergenic 30.0%
! CTAATTTTGTGTTTCACTTG+TGG + chr6_3:29595101-29595120 Msa0947100:intron 30.0%
! AGTTTTTGCCAAAATTACAG+TGG + chr6_3:29595290-29595309 Msa0947100:intron 30.0%
! GAATTTCGATTTTCTTTCCT+TGG + chr6_3:29595375-29595394 Msa0947100:intron 30.0%
ACATGAGTATTATCATGGAA+AGG - chr6_3:29601460-29601479 None:intergenic 30.0%
TGTACACATGAGTATTATCA+TGG - chr6_3:29601455-29601474 None:intergenic 30.0%
CGATATATTTATTGATCCCA+AGG + chr6_3:29595950-29595969 Msa0947100:intron 30.0%
TTCAGTATATTTCGGAATCA+AGG - chr6_3:29601354-29601373 None:intergenic 30.0%
!! TATATTGACTTAGTTCGGTA+TGG + chr6_3:29596057-29596076 Msa0947100:intron 30.0%
TACAGTCATATTTCATCAAG+AGG + chr6_3:29596091-29596110 Msa0947100:intron 30.0%
AGATATATCTCCTGTTTATG+AGG + chr6_3:29596119-29596138 Msa0947100:intron 30.0%
TAAAAGGATAACCATAACGT+TGG - chr6_3:29601164-29601183 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG - chr6_3:29601148-29601167 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG + chr6_3:29596221-29596240 Msa0947100:intron 30.0%
CTTACTATGTAGTATTCTCA+CGG + chr6_3:29596346-29596365 Msa0947100:intron 30.0%
AAGCATAGAGACTATTATGT+GGG - chr6_3:29596471-29596490 None:intergenic 30.0%
AAAGCATAGAGACTATTATG+TGG - chr6_3:29596472-29596491 None:intergenic 30.0%
GTCAAACTTTATTGAGAAGT+GGG - chr6_3:29596503-29596522 None:intergenic 30.0%
AGTCAAACTTTATTGAGAAG+TGG - chr6_3:29596504-29596523 None:intergenic 30.0%
TAGTTTCCTTATGTTTAACG+GGG + chr6_3:29596540-29596559 Msa0947100:intron 30.0%
! ATAGCCAATCTATGTTGATT+GGG - chr6_3:29596719-29596738 None:intergenic 30.0%
AATAGCCAATCTATGTTGAT+TGG - chr6_3:29596720-29596739 None:intergenic 30.0%
! ATCAACATAGATTGGCTATT+AGG + chr6_3:29596720-29596739 Msa0947100:intron 30.0%
! TCAACATAGATTGGCTATTA+GGG + chr6_3:29596721-29596740 Msa0947100:intron 30.0%
AGTATATCCAGATCGTAATT+TGG - chr6_3:29597180-29597199 None:intergenic 30.0%
! TATGGATTGTTTCTTGAACA+TGG - chr6_3:29597258-29597277 None:intergenic 30.0%
TTGGATATCTTAAAGGACTA+TGG - chr6_3:29597276-29597295 None:intergenic 30.0%
!! ATAGTCCTTTAAGATATCCA+AGG + chr6_3:29597275-29597294 Msa0947100:intron 30.0%
ATATCCAAGGATATTCTTGA+AGG + chr6_3:29597288-29597307 Msa0947100:intron 30.0%
AATACCTTCAAGAATATCCT+TGG - chr6_3:29597295-29597314 None:intergenic 30.0%
TTATCTATACATGTGAGACA+TGG - chr6_3:29597371-29597390 None:intergenic 30.0%
AAAGAAATCTTGTGCACATA+AGG - chr6_3:29597461-29597480 None:intergenic 30.0%
! ATAATGCAAATTCTAGGAGA+TGG - chr6_3:29597672-29597691 None:intergenic 30.0%
AAGATGTGATTGATTGTAGA+AGG - chr6_3:29597781-29597800 None:intergenic 30.0%
CACAAACCATATATGGATAT+TGG - chr6_3:29597890-29597909 None:intergenic 30.0%
!! CATTTCGATATTAGTCTTGA+AGG - chr6_3:29598263-29598282 None:intergenic 30.0%
AGACTAATATCGAAATGTGT+AGG + chr6_3:29598266-29598285 Msa0947100:intron 30.0%
CTTTCTATACTAGTAAGTTG+CGG + chr6_3:29598309-29598328 Msa0947100:intron 30.0%
AGAATAACACTTGGGTAAAT+TGG - chr6_3:29598344-29598363 None:intergenic 30.0%
!! TTACCCAAGTGTTATTCTTT+TGG + chr6_3:29598346-29598365 Msa0947100:intron 30.0%
!! TACCCAAGTGTTATTCTTTT+GGG + chr6_3:29598347-29598366 Msa0947100:intron 30.0%
AACCCAAAAGAATAACACTT+GGG - chr6_3:29598352-29598371 None:intergenic 30.0%
AAACCCAAAAGAATAACACT+TGG - chr6_3:29598353-29598372 None:intergenic 30.0%
TTGTATGAGATACAATTGGA+AGG + chr6_3:29598483-29598502 Msa0947100:intron 30.0%
CAAAACTCAGTTATTTAGGT+AGG - chr6_3:29598513-29598532 None:intergenic 30.0%
ACTTAAAGCAAGGTGAAATA+TGG + chr6_3:29598549-29598568 Msa0947100:intron 30.0%
!! TCATTGGAAGATTTTCTAGT+GGG - chr6_3:29598582-29598601 None:intergenic 30.0%
TTTGAATCGGAAAATCTCAT+TGG - chr6_3:29598598-29598617 None:intergenic 30.0%
! TTTTCCGATTCAAATGTTGA+AGG + chr6_3:29598604-29598623 Msa0947100:intron 30.0%
TCAGAAAAGAGTTTCTGAAT+TGG + chr6_3:29598788-29598807 Msa0947100:intron 30.0%
TATAGACATAGAAAGTTGCT+AGG - chr6_3:29598875-29598894 None:intergenic 30.0%
! TATCGATTATACATATCGAC+GGG + chr6_3:29599028-29599047 Msa0947100:intron 30.0%
GATGATATCATTCGTTCAAT+AGG + chr6_3:29599307-29599326 Msa0947100:intron 30.0%
AATACAACGCTTGTATAGTT+AGG - chr6_3:29599477-29599496 None:intergenic 30.0%
!!! TTTAGCCCTGTAATTTGTTT+TGG + chr6_3:29599759-29599778 Msa0947100:intron 30.0%
ATAAAAATCTTGTGCACACA+AGG + chr6_3:29599912-29599931 Msa0947100:intron 30.0%
AACACTTTCAAGAATATCCA+TGG + chr6_3:29600078-29600097 Msa0947100:intron 30.0%
AATATCCATGGATGTCTTAA+AGG + chr6_3:29600090-29600109 Msa0947100:intron 30.0%
!! GTTTCTTGAAAACGGATTAA+AGG + chr6_3:29600123-29600142 Msa0947100:intron 30.0%
AGTATATCCAAATCGCAATT+TGG + chr6_3:29600193-29600212 Msa0947100:intron 30.0%
! TTTGGAATAAATGCTATGCT+TGG + chr6_3:29600211-29600230 Msa0947100:intron 30.0%
! GAAGTGTCAAAGTATACATT+TGG - chr6_3:29596931-29596950 None:intergenic 30.0%
! ACACTTCAATTTCTTTTCGA+TGG + chr6_3:29600451-29600470 Msa0947100:intron 30.0%
TAAGGAACTATTTCCTATGT+TGG - chr6_3:29600513-29600532 None:intergenic 30.0%
CATACTATGTAGTATTCTCA+CGG - chr6_3:29601024-29601043 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG - chr6_3:29596221-29596240 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG + chr6_3:29601148-29601167 Msa0947100:intron 30.0%
TAAAAGGATAACCATAACGT+TGG + chr6_3:29601164-29601183 Msa0947100:intron 30.0%
AGATATATCTCCTGTTTATG+AGG - chr6_3:29596119-29596138 None:intergenic 30.0%
TACAGTCATATTTCATCAAG+AGG - chr6_3:29596091-29596110 None:intergenic 30.0%
TTCAGTATATTTCGGAATCA+AGG + chr6_3:29601354-29601373 Msa0947100:intron 30.0%
CAATAAAGATATCGAGACAA+AGG + chr6_3:29601426-29601445 Msa0947100:intron 30.0%
TGTACACATGAGTATTATCA+TGG + chr6_3:29601455-29601474 Msa0947100:intron 30.0%
ACATGAGTATTATCATGGAA+AGG + chr6_3:29601460-29601479 Msa0947100:intron 30.0%
CGAAAAATCGAATAGAAGAA+TGG - chr6_3:29602062-29602081 None:intergenic 30.0%
ACATGAGTATTATCATGGAA+AGG - chr6_3:29601460-29601479 None:intergenic 30.0%
TGTACACATGAGTATTATCA+TGG - chr6_3:29601455-29601474 None:intergenic 30.0%
CGATATATTTATTGATCCCA+AGG + chr6_3:29595950-29595969 Msa0947100:intron 30.0%
AGATATATCTCCTGTTTATG+AGG + chr6_3:29596119-29596138 Msa0947100:intron 30.0%
TAAAAGGATAACCATAACGT+TGG - chr6_3:29601164-29601183 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG - chr6_3:29601148-29601167 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG + chr6_3:29596221-29596240 Msa0947100:intron 30.0%
CTTACTATGTAGTATTCTCA+CGG + chr6_3:29596346-29596365 Msa0947100:intron 30.0%
AAGCATAGAGACTATTATGT+GGG - chr6_3:29596471-29596490 None:intergenic 30.0%
AAAGCATAGAGACTATTATG+TGG - chr6_3:29596472-29596491 None:intergenic 30.0%
GTCAAACTTTATTGAGAAGT+GGG - chr6_3:29596503-29596522 None:intergenic 30.0%
AGTCAAACTTTATTGAGAAG+TGG - chr6_3:29596504-29596523 None:intergenic 30.0%
TAGTTTCCTTATGTTTAACG+GGG + chr6_3:29596540-29596559 Msa0947100:intron 30.0%
! AGAATAGTTAGTCTGTTTGA+TGG - chr6_3:29603368-29603387 None:intergenic 30.0%
TCAAACAGACTAACTATTCT+AGG + chr6_3:29603368-29603387 Msa0947100:intron 30.0%
CAAACAGACTAACTATTCTA+GGG + chr6_3:29603369-29603388 Msa0947100:intron 30.0%
! ATAGCCAATCTATGTTGATT+GGG - chr6_3:29596719-29596738 None:intergenic 30.0%
AATAGCCAATCTATGTTGAT+TGG - chr6_3:29596720-29596739 None:intergenic 30.0%
! ATCAACATAGATTGGCTATT+AGG + chr6_3:29596720-29596739 Msa0947100:intron 30.0%
! TCAACATAGATTGGCTATTA+GGG + chr6_3:29596721-29596740 Msa0947100:intron 30.0%
CATGTGTTTAACTAATAGTG+TGG + chr6_3:29603547-29603566 Msa0947100:intron 30.0%
TTAATTATGTTGTCTTCCTC+AGG - chr6_3:29603657-29603676 None:intergenic 30.0%
! TAAAGTATCTTCTCCAAGAA+AGG - chr6_3:29603702-29603721 None:intergenic 30.0%
TTTCTTGGAGAAGATACTTT+AGG + chr6_3:29603701-29603720 Msa0947100:intron 30.0%
TTCTTGGAGAAGATACTTTA+GGG + chr6_3:29603702-29603721 Msa0947100:intron 30.0%
ACCCACATCAAAAATTCAAA+AGG - chr6_3:29603776-29603795 None:intergenic 30.0%
!!! CTTTGGAGTTTTTGATTCAA+TGG + chr6_3:29603814-29603833 Msa0947100:intron 30.0%
!! TTGGAGTTTTTGATTCAATG+GGG + chr6_3:29603816-29603835 Msa0947100:intron 30.0%
! ATTCCTTTGAAGAAGAAATG+TGG + chr6_3:29603942-29603961 Msa0947100:CDS 30.0%
TAACCACATTTCTTCTTCAA+AGG - chr6_3:29603948-29603967 None:intergenic 30.0%
AGAAATGTGGTTAATGTATG+AGG + chr6_3:29603955-29603974 Msa0947100:intron 30.0%
CATATAACATGAATTGCAAG+AGG - chr6_3:29603985-29604004 None:intergenic 30.0%
!! AGATCGGTTGATTTGAAAAT+AGG + chr6_3:29604073-29604092 Msa0947100:intron 30.0%
TGATATGTAGATTGTAGTCT+TGG + chr6_3:29604440-29604459 Msa0947100:intron 30.0%
GATATGTAGATTGTAGTCTT+GGG + chr6_3:29604441-29604460 Msa0947100:intron 30.0%
TAGAAGTCATAAGCTTAAAC+AGG + chr6_3:29604497-29604516 Msa0947100:intron 30.0%
ACACAAAAACAAAAGAAGTG+TGG - chr6_3:29604571-29604590 None:intergenic 30.0%
! GAGATTTTGTTAAAATGGTC+AGG + chr6_3:29604599-29604618 Msa0947100:intron 30.0%
!! GAATTTGAGTATCGTTTTTC+TGG + chr6_3:29604751-29604770 Msa0947100:intron 30.0%
AATGTTTACAGATATGGAGA+TGG + chr6_3:29605142-29605161 Msa0947100:intron 30.0%
! TTCTTTACATTTTTGTTGGC+TGG + chr6_3:29605246-29605265 Msa0947100:intron 30.0%
!! ACCATCGTTTTTACTTTCAT+TGG + chr6_3:29605476-29605495 Msa0947100:CDS 30.0%
!! CCATCGTTTTTACTTTCATT+GGG + chr6_3:29605477-29605496 Msa0947100:CDS 30.0%
!! CATCGTTTTTACTTTCATTG+GGG + chr6_3:29605478-29605497 Msa0947100:CDS 30.0%
AAAAAGAAAAGCAGAATCTG+AGG + chr6_3:29605512-29605531 Msa0947100:CDS 30.0%
! TTCTGAAAGAATAGGGAATT+TGG - chr6_3:29605544-29605563 None:intergenic 30.0%
! ACTCAGATTCTGAAAGAATA+GGG - chr6_3:29605551-29605570 None:intergenic 30.0%
! GTTGTCAAGTATTCTCTTTT+AGG + chr6_3:29605722-29605741 Msa0947100:three_prime_UTR 30.0%
! GAAGTGTTAATTGGATTTCA+GGG - chr6_3:29605842-29605861 None:intergenic 30.0%
! AACACTTCCATTTTAAATCG+AGG + chr6_3:29605854-29605873 Msa0947100:three_prime_UTR 30.0%
CTGCAACAGTTTATAAAGTA+TGG + chr6_3:29606089-29606108 Msa0947100:intron 30.0%
GTATGGTTAATTTATCACTC+TGG + chr6_3:29606106-29606125 Msa0947100:intron 30.0%
ATATGCTGAATTTCATCATG+AGG + chr6_3:29606176-29606195 Msa0947100:three_prime_UTR 30.0%
AATTCTACTGCTAAATTGGT+CGG - chr6_3:29606430-29606449 None:intergenic 30.0%
CTCTAATTCTACTGCTAAAT+TGG - chr6_3:29606434-29606453 None:intergenic 30.0%
GCAGTTATCACCAACAATTT+CGG - chr6_3:29594143-29594162 None:intergenic 35.0%
ATCCAAGAATTCCATTTCCT+TGG + chr6_3:29594253-29594272 Msa0947100:intron 35.0%
TACCAAGGAAATGGAATTCT+TGG - chr6_3:29594258-29594277 None:intergenic 35.0%
!! GAGATTATTTTGTCTTGGCT+TGG + chr6_3:29594320-29594339 Msa0947100:intron 35.0%
! CTGTTACTGATTGCAAATTG+AGG + chr6_3:29594343-29594362 Msa0947100:intron 35.0%
!! CCCTCTATTGATTTATGATC+AGG + chr6_3:29594614-29594633 Msa0947100:intron 35.0%
AAGGTAAAGACAGGAATAGA+AGG - chr6_3:29594712-29594731 None:intergenic 35.0%
!! TTTCTACTTGCTGTGATCAT+GGG + chr6_3:29594730-29594749 Msa0947100:exon 35.0%
!! GTGAATTTGCAGAGTATTGA+AGG + chr6_3:29594909-29594928 Msa0947100:CDS 35.0%
! CAATTTCTGTCATTTGTGTG+TGG - chr6_3:29595016-29595035 None:intergenic 35.0%
TCGAAAGATATCATACACAG+CGG + chr6_3:29595326-29595345 Msa0947100:intron 35.0%
GTCAAATTCGTAATGATCCA+AGG - chr6_3:29595395-29595414 None:intergenic 35.0%
ACATGAATCAGTGATACGAT+TGG + chr6_3:29595413-29595432 Msa0947100:intron 35.0%
ATTCAGAACAGAAACTATCG+AGG - chr6_3:29595441-29595460 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG + chr6_3:29595637-29595656 Msa0947100:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG + chr6_3:29595638-29595657 Msa0947100:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG - chr6_3:29601495-29601514 None:intergenic 35.0%
TATATCTCCTGTTTATGAGG+AGG + chr6_3:29596122-29596141 Msa0947100:intron 35.0%
ATATCTCCTGTTTATGAGGA+GGG + chr6_3:29596123-29596142 Msa0947100:intron 35.0%
TACTTGATGAATCATGCTGA+GGG - chr6_3:29601195-29601214 None:intergenic 35.0%
! TAACCATAACGTTGGTTGAT+GGG - chr6_3:29601172-29601191 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG - chr6_3:29601171-29601190 None:intergenic 35.0%
AGAATAGTTAGTCCGTTTGA+TGG - chr6_3:29596593-29596612 None:intergenic 35.0%
!! TCAAACGGACTAACTATTCT+AGG + chr6_3:29596593-29596612 Msa0947100:intron 35.0%
!! CAAACGGACTAACTATTCTA+GGG + chr6_3:29596594-29596613 Msa0947100:intron 35.0%
! CAATCTATGTTGATTGGGTT+TGG - chr6_3:29596714-29596733 None:intergenic 35.0%
CAAACCCAATCAACATAGAT+TGG + chr6_3:29596712-29596731 Msa0947100:intron 35.0%
AGATACTCTACTAGCAGATA+AGG + chr6_3:29596838-29596857 Msa0947100:intron 35.0%
TAAGGAACTCTTTCCTATGT+TGG + chr6_3:29596856-29596875 Msa0947100:intron 35.0%
TTTCGATAGAAGATCGAAAG+TGG - chr6_3:29596904-29596923 None:intergenic 35.0%
! AATCTCGTCTGAGGTAAAAT+TGG - chr6_3:29597000-29597019 None:intergenic 35.0%
TTTACCTCAGACGAGATTAA+TGG + chr6_3:29597002-29597021 Msa0947100:intron 35.0%
AATATGTGTTTCTTGCGTTG+TGG - chr6_3:29597031-29597050 None:intergenic 35.0%
! TATTAGTTTGGTGGAGTATG+TGG - chr6_3:29599954-29599973 None:intergenic 35.0%
!! GAGCATTGATATTAGTTTGG+TGG - chr6_3:29599945-29599964 None:intergenic 35.0%
!! TGGGAGCATTGATATTAGTT+TGG - chr6_3:29599942-29599961 None:intergenic 35.0%
! TATACCTTTCTAGCATCCTT+TGG + chr6_3:29597574-29597593 Msa0947100:intron 35.0%
TAATCCAAAGGATGCTAGAA+AGG - chr6_3:29597581-29597600 None:intergenic 35.0%
TTTCTTGTAGAAAGCTGACA+TGG - chr6_3:29597824-29597843 None:intergenic 35.0%
TCTCATGAGTCATACTCATT+TGG + chr6_3:29597855-29597874 Msa0947100:intron 35.0%
CCATGTACACAAACCATATA+TGG - chr6_3:29597897-29597916 None:intergenic 35.0%
! CCATATATGGTTTGTGTACA+TGG + chr6_3:29597894-29597913 Msa0947100:intron 35.0%
GGATTCTTTATAAGATCCCA+TGG + chr6_3:29597915-29597934 Msa0947100:intron 35.0%
TTAGCCATTTCTCAAAGTTC+AGG + chr6_3:29597941-29597960 Msa0947100:intron 35.0%
!!! CTTGAAGGGTGTTAAACTTT+TGG - chr6_3:29598248-29598267 None:intergenic 35.0%
! CTCATTGGAAGATTTTCTAG+TGG - chr6_3:29598583-29598602 None:intergenic 35.0%
! CGTATCATGTTTTATGTGCA+TGG + chr6_3:29598954-29598973 Msa0947100:intron 35.0%
TGTCAATACTTCACCAGAAA+CGG - chr6_3:29599008-29599027 None:intergenic 35.0%
GTTTGTTTAGCATGAACAAC+CGG - chr6_3:29599606-29599625 None:intergenic 35.0%
!! TGGGAGCATTGATATTAGTT+TGG + chr6_3:29599942-29599961 Msa0947100:intron 35.0%
!! GAGCATTGATATTAGTTTGG+TGG + chr6_3:29599945-29599964 Msa0947100:intron 35.0%
! TATTAGTTTGGTGGAGTATG+TGG + chr6_3:29599954-29599973 Msa0947100:intron 35.0%
TTATCTACACATGTGAGACA+TGG + chr6_3:29600002-29600021 Msa0947100:intron 35.0%
! TCGAACACCACAATCAATTT+TGG - chr6_3:29600052-29600071 None:intergenic 35.0%
!! TTAGTCCTTTAAGACATCCA+TGG - chr6_3:29600098-29600117 None:intergenic 35.0%
ATGGATGTCTTAAAGGACTA+AGG + chr6_3:29600097-29600116 Msa0947100:intron 35.0%
AAACCAATTTCACCTCAGAT+GGG - chr6_3:29600377-29600396 None:intergenic 35.0%
TAAACCAATTTCACCTCAGA+TGG - chr6_3:29600378-29600397 None:intergenic 35.0%
GAACTATTTCCTATGTTGGT+AGG - chr6_3:29600509-29600528 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG + chr6_3:29601171-29601190 Msa0947100:intron 35.0%
! TAACCATAACGTTGGTTGAT+GGG + chr6_3:29601172-29601191 Msa0947100:intron 35.0%
TACTTGATGAATCATGCTGA+GGG + chr6_3:29601195-29601214 Msa0947100:intron 35.0%
ATATCTCCTGTTTATGAGGA+GGG - chr6_3:29596123-29596142 None:intergenic 35.0%
TATATCTCCTGTTTATGAGG+AGG - chr6_3:29596122-29596141 None:intergenic 35.0%
!! TATATTGACTTAGTTCGGCA+TGG - chr6_3:29602832-29602851 None:intergenic 35.0%
GGTGACAATATCTATGTCTT+GGG + chr6_3:29601401-29601420 Msa0947100:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG + chr6_3:29601495-29601514 Msa0947100:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG - chr6_3:29595638-29595657 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG - chr6_3:29595637-29595656 None:intergenic 35.0%
CTGAATTTCGTAATGATCCA+AGG + chr6_3:29602003-29602022 Msa0947100:intron 35.0%
! ATCTTTCGATTTTCCTTCAG+TGG - chr6_3:29595315-29595334 None:intergenic 35.0%
TCGAAAGATATCATACACAG+CGG + chr6_3:29595326-29595345 Msa0947100:intron 35.0%
GTCAAATTCGTAATGATCCA+AGG - chr6_3:29595395-29595414 None:intergenic 35.0%
ATTCAGAACAGAAACTATCG+AGG - chr6_3:29595441-29595460 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG + chr6_3:29595637-29595656 Msa0947100:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG + chr6_3:29595638-29595657 Msa0947100:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG - chr6_3:29601495-29601514 None:intergenic 35.0%
TTCAGTATATTTCGGAATCG+AGG - chr6_3:29602791-29602810 None:intergenic 35.0%
!! TATATTGACTTAGTTCGGCA+TGG + chr6_3:29602832-29602851 Msa0947100:intron 35.0%
TATATCTCCTGTTTATGAGG+AGG + chr6_3:29596122-29596141 Msa0947100:intron 35.0%
ATATCTCCTGTTTATGAGGA+GGG + chr6_3:29596123-29596142 Msa0947100:intron 35.0%
TACTTGATGAATCATGCTGA+GGG - chr6_3:29601195-29601214 None:intergenic 35.0%
! TAACCATAACGTTGGTTGAT+GGG - chr6_3:29601172-29601191 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG - chr6_3:29601171-29601190 None:intergenic 35.0%
! CAATCTATGTTGATTGGGTT+TGG - chr6_3:29596714-29596733 None:intergenic 35.0%
CAAACCCAATCAACATAGAT+TGG + chr6_3:29596712-29596731 Msa0947100:intron 35.0%
!! TGGTATATCTGTTTTTCCTG+AGG + chr6_3:29603638-29603657 Msa0947100:intron 35.0%
TATTGATATGTGGCCTTTCT+TGG + chr6_3:29603686-29603705 Msa0947100:intron 35.0%
!!! TGCAGCAATTTTGGTTTTGA+AGG + chr6_3:29603866-29603885 Msa0947100:intron 35.0%
!!! AGCAATTTTGGTTTTGAAGG+AGG + chr6_3:29603869-29603888 Msa0947100:intron 35.0%
!!! TTTGGTTTTGAAGGAGGAAT+TGG + chr6_3:29603875-29603894 Msa0947100:CDS 35.0%
GGAATAAACTCTTCCAAAAC+TGG - chr6_3:29603927-29603946 None:intergenic 35.0%
TAACCTTCTAGTAGAAAGGT+AGG - chr6_3:29604212-29604231 None:intergenic 35.0%
CTTCTAACCTTCTAGTAGAA+AGG - chr6_3:29604216-29604235 None:intergenic 35.0%
GTTCTACTTACTCAGATTCA+TGG + chr6_3:29604624-29604643 Msa0947100:intron 35.0%
AGAGGGAGACAAAAAATCTA+TGG + chr6_3:29604669-29604688 Msa0947100:intron 35.0%
GAGGGAGACAAAAAATCTAT+GGG + chr6_3:29604670-29604689 Msa0947100:intron 35.0%
AAAAACATCTCCTGCACATT+AGG - chr6_3:29604796-29604815 None:intergenic 35.0%
GTAAATGCTGCAAACGAATA+TGG + chr6_3:29604930-29604949 Msa0947100:CDS 35.0%
CAAAATAACGCTCAATGAGA+TGG - chr6_3:29604960-29604979 None:intergenic 35.0%
!! GTTGTTATGTGCTGTTTACA+AGG + chr6_3:29605016-29605035 Msa0947100:intron 35.0%
CTAACTGCTAAGGCTATATT+TGG - chr6_3:29605213-29605232 None:intergenic 35.0%
CAAAGATGGTTTGATGCTTA+TGG + chr6_3:29605285-29605304 Msa0947100:intron 35.0%
CCCAATGAAAGTAAAAACGA+TGG - chr6_3:29605480-29605499 None:intergenic 35.0%
! CACTCAGATTCTGAAAGAAT+AGG - chr6_3:29605552-29605571 None:intergenic 35.0%
TCTTTCAGAATCTGAGTGAA+TGG + chr6_3:29605554-29605573 Msa0947100:exon 35.0%
TAAGCACAAGAAGGTTTGAA+AGG - chr6_3:29605754-29605773 None:intergenic 35.0%
!! GGAAGTGTTAATTGGATTTC+AGG - chr6_3:29605843-29605862 None:intergenic 35.0%
TATGCAGGATTTGAAAACCT+TGG + chr6_3:29606248-29606267 Msa0947100:three_prime_UTR 35.0%
!!! TATTTTAGCTCTCCATTTGC+TGG - chr6_3:29606474-29606493 None:intergenic 35.0%
GCTAAAATACAATGTCGACA+TGG + chr6_3:29606485-29606504 Msa0947100:three_prime_UTR 35.0%
TAGCGTGTAAGAAATACTCA+AGG + chr6_3:29606543-29606562 Msa0947100:three_prime_UTR 35.0%
!!! TTTTAGAGTTCCAGAAGCAA+TGG + chr6_3:29606595-29606614 Msa0947100:three_prime_UTR 35.0%
TTCAAAAAAGCCATTGCTTC+TGG - chr6_3:29606608-29606627 None:intergenic 35.0%
ACTAATAAGCATGAAGCAAG+AGG + chr6_3:29606644-29606663 Msa0947100:three_prime_UTR 35.0%
CTAATAAGCATGAAGCAAGA+GGG + chr6_3:29606645-29606664 Msa0947100:three_prime_UTR 35.0%
!! CTGATTTGGTCTTCACTATT+AGG + chr6_3:29606809-29606828 Msa0947100:three_prime_UTR 35.0%
AGCAAAATAAACAGGAGCAG+AGG + chr6_3:29593947-29593966 Msa0947100:five_prime_UTR 40.0%
ATGACAATGCTGCACGAATT+TGG - chr6_3:29594183-29594202 None:intergenic 40.0%
GCAAGTAGAAAGGTAAAGAC+AGG - chr6_3:29594721-29594740 None:intergenic 40.0%
CATGATCACAGCAAGTAGAA+AGG - chr6_3:29594731-29594750 None:intergenic 40.0%
!! CTTTCTACTTGCTGTGATCA+TGG + chr6_3:29594729-29594748 Msa0947100:exon 40.0%
!! TTCTACTTGCTGTGATCATG+GGG + chr6_3:29594731-29594750 Msa0947100:exon 40.0%
!! GAGTATTGAAGGTCTGACAA+AGG + chr6_3:29594920-29594939 Msa0947100:CDS 40.0%
ATTGAAGGTCTGACAAAGGT+TGG + chr6_3:29594924-29594943 Msa0947100:CDS 40.0%
GGGACTGTTATATGTGTTTC+AGG + chr6_3:29594948-29594967 Msa0947100:CDS 40.0%
TGTGTGTGGTGTATTAACGA+TGG - chr6_3:29595002-29595021 None:intergenic 40.0%
GCTGTCTGAATTGATGTCTT+TGG + chr6_3:29595164-29595183 Msa0947100:intron 40.0%
GTCTGAATTGATGTCTTTGG+TGG + chr6_3:29595167-29595186 Msa0947100:intron 40.0%
! CGATTCTAAAAAAGCAGCCT+CGG - chr6_3:29595240-29595259 None:intergenic 40.0%
!! CTTCAGTGCCACTGTAATTT+TGG - chr6_3:29595301-29595320 None:intergenic 40.0%
! CAAAATTACAGTGGCACTGA+AGG + chr6_3:29595299-29595318 Msa0947100:intron 40.0%
TCTCTGCACTTCCAATTCAT+TGG - chr6_3:29601829-29601848 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG + chr6_3:29595545-29595564 Msa0947100:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG + chr6_3:29595546-29595565 Msa0947100:intron 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG - chr6_3:29601779-29601798 None:intergenic 40.0%
TTCTTTGTGTGTGACCCTAT+AGG + chr6_3:29595767-29595786 Msa0947100:intron 40.0%
CAACGTGACTAGAACCTATA+GGG - chr6_3:29601586-29601605 None:intergenic 40.0%
CACTTGACATTCTTGTCACT+TGG - chr6_3:29601494-29601513 None:intergenic 40.0%
GGTGACAATATCTATGCCTT+GGG - chr6_3:29595969-29595988 None:intergenic 40.0%
ATTTGTCCCTCCTCATAAAC+AGG - chr6_3:29601238-29601257 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG - chr6_3:29601194-29601213 None:intergenic 40.0%
ACTATGTAGTATTCTCACGG+CGG + chr6_3:29596349-29596368 Msa0947100:intron 40.0%
TGATCACATCTCACAGATCA+TGG - chr6_3:29596440-29596459 None:intergenic 40.0%
!!! GATTGGCTTTTAGTGCTAGT+GGG - chr6_3:29600606-29600625 None:intergenic 40.0%
!!! TGATTGGCTTTTAGTGCTAG+TGG - chr6_3:29600605-29600624 None:intergenic 40.0%
TGTTAGCATCAAGCACACTA+TGG + chr6_3:29596812-29596831 Msa0947100:intron 40.0%
GAACTCTTTCCTATGTTGGT+AGG + chr6_3:29596860-29596879 Msa0947100:intron 40.0%
GAAGTAAGACCTACCAACAT+AGG - chr6_3:29596872-29596891 None:intergenic 40.0%
GATTCCATTAATCTCGTCTG+AGG - chr6_3:29597009-29597028 None:intergenic 40.0%
GTGCACATAAGGAGATTAGT+GGG - chr6_3:29597450-29597469 None:intergenic 40.0%
TGTGCACATAAGGAGATTAG+TGG - chr6_3:29597451-29597470 None:intergenic 40.0%
GTAGGGTTTCGTTAATCCAA+AGG - chr6_3:29597593-29597612 None:intergenic 40.0%
TTGTAGAAAGCTGACATGGA+TGG - chr6_3:29597820-29597839 None:intergenic 40.0%
! ATGGCCTGAACTTTGAGAAA+TGG - chr6_3:29597948-29597967 None:intergenic 40.0%
ACTTCCTAGAAGGTCGTAAA+TGG - chr6_3:29597967-29597986 None:intergenic 40.0%
! ACGACCTTCTAGGAAGTAAT+AGG + chr6_3:29597970-29597989 Msa0947100:intron 40.0%
! CGACCTTCTAGGAAGTAATA+GGG + chr6_3:29597971-29597990 Msa0947100:intron 40.0%
CTTGAGAGATTCATAGCGTT+AGG + chr6_3:29598075-29598094 Msa0947100:intron 40.0%
AGAGATTCATAGCGTTAGGA+TGG + chr6_3:29598079-29598098 Msa0947100:intron 40.0%
ATGATATATAAGCCGTGGTG+AGG + chr6_3:29598168-29598187 Msa0947100:intron 40.0%
TATACTAGTAAGTTGCGGTG+CGG + chr6_3:29598314-29598333 Msa0947100:intron 40.0%
! TTCACCTTGCTTTAAGTCAG+CGG - chr6_3:29598546-29598565 None:intergenic 40.0%
! ACAACGCTTATCAGAAGCAT+TGG + chr6_3:29598903-29598922 Msa0947100:intron 40.0%
!! CAACGCTTATCAGAAGCATT+GGG + chr6_3:29598904-29598923 Msa0947100:intron 40.0%
GATGTTTCAGAAACCGTTTC+TGG + chr6_3:29598992-29599011 Msa0947100:intron 40.0%
CTTTGATGCTTCACCAGAAT+CGG - chr6_3:29599388-29599407 None:intergenic 40.0%
GTTTGTTCAGTATGGACAAC+CGG - chr6_3:29599413-29599432 None:intergenic 40.0%
TGAGCTTCAATATCCGAATC+TGG + chr6_3:29599565-29599584 Msa0947100:intron 40.0%
CTATGATGCTTCACCAGATT+CGG - chr6_3:29599581-29599600 None:intergenic 40.0%
TTTCGATGGAAGATCGAAAG+TGG + chr6_3:29600465-29600484 Msa0947100:intron 40.0%
GAAGTGTAACCTACCAACAT+AGG + chr6_3:29600497-29600516 Msa0947100:intron 40.0%
ACTAGAATAGTATCATGCCC+AGG + chr6_3:29600536-29600555 Msa0947100:intron 40.0%
CTAGAATAGTATCATGCCCA+GGG + chr6_3:29600537-29600556 Msa0947100:intron 40.0%
!!! TGATTGGCTTTTAGTGCTAG+TGG + chr6_3:29600605-29600624 Msa0947100:intron 40.0%
!!! GATTGGCTTTTAGTGCTAGT+GGG + chr6_3:29600606-29600625 Msa0947100:intron 40.0%
TATCAATGACCCATGAGATG+CGG - chr6_3:29600937-29600956 None:intergenic 40.0%
CTATGTAGTATTCTCACGGT+GGG - chr6_3:29601020-29601039 None:intergenic 40.0%
ACTATGTAGTATTCTCACGG+TGG - chr6_3:29596349-29596368 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG + chr6_3:29601194-29601213 Msa0947100:intron 40.0%
ATTTGTCCCTCCTCATAAAC+AGG + chr6_3:29601238-29601257 Msa0947100:intron 40.0%
GGGTGACAATATCTATGTCT+TGG + chr6_3:29601400-29601419 Msa0947100:intron 40.0%
CACTTGACATTCTTGTCACT+TGG + chr6_3:29601494-29601513 Msa0947100:intron 40.0%
CAACGTGACTAGAACCTATA+GGG + chr6_3:29601586-29601605 Msa0947100:intron 40.0%
TTCTTTGTGTGTGACCCTAT+AGG - chr6_3:29595767-29595786 None:intergenic 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG + chr6_3:29601779-29601798 Msa0947100:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG - chr6_3:29595546-29595565 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG - chr6_3:29595545-29595564 None:intergenic 40.0%
TCTCTGCACTTCCAATTCAT+TGG + chr6_3:29601829-29601848 Msa0947100:intron 40.0%
TCGATTGTTACCTTGAACTG+TGG - chr6_3:29601968-29601987 None:intergenic 40.0%
TCTCTGCACTTCCAATTCAT+TGG - chr6_3:29601829-29601848 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG + chr6_3:29595545-29595564 Msa0947100:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG + chr6_3:29595546-29595565 Msa0947100:intron 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG - chr6_3:29601779-29601798 None:intergenic 40.0%
TTCTTTGTGTGTGACCCTAT+AGG + chr6_3:29595767-29595786 Msa0947100:intron 40.0%
CAACGTGACTAGAACCTATA+GGG - chr6_3:29601586-29601605 None:intergenic 40.0%
CACTTGACATTCTTGTCACT+TGG - chr6_3:29601494-29601513 None:intergenic 40.0%
GGTGACAATATCTATGCCTT+GGG - chr6_3:29595969-29595988 None:intergenic 40.0%
ATTTGTCCCTCCTCATAAAC+AGG - chr6_3:29601238-29601257 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG - chr6_3:29601194-29601213 None:intergenic 40.0%
AAGCACTTGAGTTCACATCT+AGG + chr6_3:29603024-29603043 Msa0947100:intron 40.0%
AGCACTTGAGTTCACATCTA+GGG + chr6_3:29603025-29603044 Msa0947100:intron 40.0%
TTCACATCTAGGGATCATAG+TGG + chr6_3:29603035-29603054 Msa0947100:intron 40.0%
ACTATGTAGTATTCTCACGG+CGG + chr6_3:29596349-29596368 Msa0947100:intron 40.0%
TGATCACATCTCACAGATCA+TGG - chr6_3:29596440-29596459 None:intergenic 40.0%
ATACCAGAATCACCACTCAT+CGG - chr6_3:29603624-29603643 None:intergenic 40.0%
!! TTTTGATTCAATGGGGCTGA+TGG + chr6_3:29603823-29603842 Msa0947100:intron 40.0%
TTTGATTCAATGGGGCTGAT+GGG + chr6_3:29603824-29603843 Msa0947100:intron 40.0%
! ATGTAGATTGTAGTCTTGGG+AGG + chr6_3:29604444-29604463 Msa0947100:intron 40.0%
CTCAGATTCATGGATAGTGT+TGG + chr6_3:29604634-29604653 Msa0947100:intron 40.0%
!! GGATAGTGTTGGTACTACAT+AGG + chr6_3:29604645-29604664 Msa0947100:intron 40.0%
AATGAGTAAGATTAACGGCG+AGG + chr6_3:29604893-29604912 Msa0947100:CDS 40.0%
AGCACATAACAACGCTCTAA+AGG - chr6_3:29605009-29605028 None:intergenic 40.0%
TGAATTTGGGAATTCCTGCA+AGG - chr6_3:29605428-29605447 None:intergenic 40.0%
CACAAGAAGGTTTGAAAGGA+TGG - chr6_3:29605750-29605769 None:intergenic 40.0%
TTCATGTCCATATTACAGGG+CGG + chr6_3:29606028-29606047 Msa0947100:intron 40.0%
ATTTGAACCGCCCTGTAATA+TGG - chr6_3:29606038-29606057 None:intergenic 40.0%
TGCAGATGAAGTATGCTTAG+TGG + chr6_3:29606138-29606157 Msa0947100:three_prime_UTR 40.0%
!!! GCGCTGTTTTTTTCTTTCCA+AGG + chr6_3:29606198-29606217 Msa0947100:three_prime_UTR 40.0%
GCACAATACGAAAGAAACCT+TGG - chr6_3:29606218-29606237 None:intergenic 40.0%
AGGTTTCTTTCGTATTGTGC+AGG + chr6_3:29606218-29606237 Msa0947100:three_prime_UTR 40.0%
GGTTTCTTTCGTATTGTGCA+GGG + chr6_3:29606219-29606238 Msa0947100:three_prime_UTR 40.0%
! AAACCTTGGCCATGATGTTT+TGG + chr6_3:29606262-29606281 Msa0947100:three_prime_UTR 40.0%
CCATATGCACCAAAACATCA+TGG - chr6_3:29606274-29606293 None:intergenic 40.0%
!!! CCATGATGTTTTGGTGCATA+TGG + chr6_3:29606271-29606290 Msa0947100:three_prime_UTR 40.0%
ATGGCTTCGTTGAAACGAAA+AGG + chr6_3:29606290-29606309 Msa0947100:three_prime_UTR 40.0%
TTCGTTGAAACGAAAAGGTC+TGG + chr6_3:29606295-29606314 Msa0947100:three_prime_UTR 40.0%
TCGTTGAAACGAAAAGGTCT+GGG + chr6_3:29606296-29606315 Msa0947100:three_prime_UTR 40.0%
GTAGAATTAGAGTTCGACGA+TGG + chr6_3:29606442-29606461 Msa0947100:three_prime_UTR 40.0%
TACTCAAGGAGAGTTCATCA+AGG + chr6_3:29606557-29606576 Msa0947100:three_prime_UTR 40.0%
! CTCTAAAAAACAGCAGGTCT+TGG - chr6_3:29606583-29606602 None:intergenic 40.0%
! CTGGAACTCTAAAAAACAGC+AGG - chr6_3:29606589-29606608 None:intergenic 40.0%
GTGACTCGATTGTGTGTTTA+AGG + chr6_3:29606771-29606790 Msa0947100:three_prime_UTR 40.0%
!! TGCTGAGATATGCACTGATT+TGG + chr6_3:29606795-29606814 Msa0947100:three_prime_UTR 40.0%
TGCAAATTGAGGGCTCTACA+TGG + chr6_3:29594354-29594373 Msa0947100:intron 45.0%
ACTGCTGCATCTTATGCTAG+AGG + chr6_3:29594536-29594555 Msa0947100:five_prime_UTR 45.0%
! TGTAAGGCAGAGGCATAAGT+TGG - chr6_3:29594688-29594707 None:intergenic 45.0%
AATAGAAGGCTGTAAGGCAG+AGG - chr6_3:29594698-29594717 None:intergenic 45.0%
GACAGGAATAGAAGGCTGTA+AGG - chr6_3:29594704-29594723 None:intergenic 45.0%
AAGGTCTGACAAAGGTTGGA+GGG + chr6_3:29594928-29594947 Msa0947100:CDS 45.0%
TGTTCGTGTGGACTTACTAG+AGG - chr6_3:29595493-29595512 None:intergenic 45.0%
AACAGTGCTCCTCCAAAACT+CGG + chr6_3:29595509-29595528 Msa0947100:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG + chr6_3:29595547-29595566 Msa0947100:intron 45.0%
CCAACGTGACTAGAACCTAT+AGG - chr6_3:29601585-29601604 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG + chr6_3:29595782-29595801 Msa0947100:intron 45.0%
GGGTGACAATATCTATGCCT+TGG - chr6_3:29595970-29595989 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG + chr6_3:29596192-29596211 Msa0947100:intron 45.0%
AAGCACTTGAGTCCACATCT+AGG + chr6_3:29596249-29596268 Msa0947100:intron 45.0%
AGCACTTGAGTCCACATCTA+GGG + chr6_3:29596250-29596269 Msa0947100:intron 45.0%
TCCACATCTAGGGATCATAG+TGG + chr6_3:29596260-29596279 Msa0947100:intron 45.0%
ACCACTATGATCCCTAGATG+TGG - chr6_3:29601106-29601125 None:intergenic 45.0%
CTAGGGATCATAGTGGTTTC+AGG + chr6_3:29596267-29596286 Msa0947100:intron 45.0%
CTATGTAGTATTCTCACGGC+GGG + chr6_3:29596350-29596369 Msa0947100:intron 45.0%
GTGAGACCCCGTTAAACATA+AGG - chr6_3:29596549-29596568 None:intergenic 45.0%
TAGTGCTAGTGGGAGATTGT+TGG - chr6_3:29600616-29600635 None:intergenic 45.0%
GAGAAATGGCTAAACGCCAT+GGG - chr6_3:29597934-29597953 None:intergenic 45.0%
TGAGAAATGGCTAAACGCCA+TGG - chr6_3:29597935-29597954 None:intergenic 45.0%
GAGCCCTATTACTTCCTAGA+AGG - chr6_3:29597977-29597996 None:intergenic 45.0%
GTAATAGGGCTCATGACGTT+AGG + chr6_3:29597985-29598004 Msa0947100:intron 45.0%
TCATGACGTTAGGATAGTCC+TGG + chr6_3:29597995-29598014 Msa0947100:intron 45.0%
AGTTTGATCTCACCTCACCA+CGG - chr6_3:29598183-29598202 None:intergenic 45.0%
! AGTATAGAAAGTGCACCTCG+CGG - chr6_3:29598300-29598319 None:intergenic 45.0%
! TCACCTTGCTTTAAGTCAGC+GGG - chr6_3:29598545-29598564 None:intergenic 45.0%
CATATCGACGGGAACATGAT+TGG + chr6_3:29599039-29599058 Msa0947100:intron 45.0%
!! TGAGCTTCGAATACCGATTC+TGG + chr6_3:29599372-29599391 Msa0947100:intron 45.0%
! CTGGTGAAGCATCAAAGATC+CGG + chr6_3:29599391-29599410 Msa0947100:intron 45.0%
! CTGGTGAAGCATCATAGATC+CGG + chr6_3:29599584-29599603 Msa0947100:intron 45.0%
TGTGCACACAAGGAGAATAG+TGG + chr6_3:29599922-29599941 Msa0947100:intron 45.0%
GTGCACACAAGGAGAATAGT+GGG + chr6_3:29599923-29599942 Msa0947100:intron 45.0%
GATTCCATTGATCCCATCTG+AGG + chr6_3:29600362-29600381 Msa0947100:intron 45.0%
TTCACCTCAGATGGGATCAA+TGG - chr6_3:29600369-29600388 None:intergenic 45.0%
! GATCCCATCTGAGGTGAAAT+TGG + chr6_3:29600371-29600390 Msa0947100:intron 45.0%
TAGTGCTAGTGGGAGATTGT+TGG + chr6_3:29600616-29600635 Msa0947100:intron 45.0%
CTAGGGATCATAGTGGTTTC+AGG - chr6_3:29596267-29596286 None:intergenic 45.0%
ACCACTATGATCCCTAGATG+TGG + chr6_3:29601106-29601125 Msa0947100:intron 45.0%
TCCACATCTAGGGATCATAG+TGG - chr6_3:29596260-29596279 None:intergenic 45.0%
AGCACTTGAGTCCACATCTA+GGG - chr6_3:29596250-29596269 None:intergenic 45.0%
AAGCACTTGAGTCCACATCT+AGG - chr6_3:29596249-29596268 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG - chr6_3:29596192-29596211 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG - chr6_3:29595782-29595801 None:intergenic 45.0%
CCAACGTGACTAGAACCTAT+AGG + chr6_3:29601585-29601604 Msa0947100:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG - chr6_3:29595547-29595566 None:intergenic 45.0%
!! CTTGGTGCTAGCCAATGAAT+TGG - chr6_3:29601843-29601862 None:intergenic 45.0%
!! CATTGGCTAGCACCAAGTTT+TGG + chr6_3:29601846-29601865 Msa0947100:intron 45.0%
AACAGTGCTCCTCCAAAACT+TGG - chr6_3:29595509-29595528 None:intergenic 45.0%
! TTTGTTGCTTGCTGCTTGCT+TGG + chr6_3:29601901-29601920 Msa0947100:intron 45.0%
CAGTTTCCAGTTCCAGCTTT+CGG + chr6_3:29601939-29601958 Msa0947100:intron 45.0%
CTTTCGGATTCCACAGTTCA+AGG + chr6_3:29601955-29601974 Msa0947100:intron 45.0%
GAAGAATGGAGTAGAAGCAG+CGG - chr6_3:29602048-29602067 None:intergenic 45.0%
TTTCGCTCTGATACCACTGA+AGG + chr6_3:29602077-29602096 Msa0947100:intron 45.0%
TGTTCGTGTGGACTTACTAG+AGG - chr6_3:29595493-29595512 None:intergenic 45.0%
AACAGTGCTCCTCCAAAACT+CGG + chr6_3:29595509-29595528 Msa0947100:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG + chr6_3:29595547-29595566 Msa0947100:intron 45.0%
CCAACGTGACTAGAACCTAT+AGG - chr6_3:29601585-29601604 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG + chr6_3:29595782-29595801 Msa0947100:intron 45.0%
GGGTGACAATATCTATGCCT+TGG - chr6_3:29595970-29595989 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG + chr6_3:29596192-29596211 Msa0947100:intron 45.0%
CTAGGGATCATAGTGGTTTC+AGG + chr6_3:29596267-29596286 Msa0947100:intron 45.0%
CTATGTAGTATTCTCACGGC+GGG + chr6_3:29596350-29596369 Msa0947100:intron 45.0%
GTGAGACCCCGTTAAACATA+AGG - chr6_3:29596549-29596568 None:intergenic 45.0%
CTATTAGGGCTTACTCCAAC+AGG + chr6_3:29596735-29596754 Msa0947100:intron 45.0%
CCTTCTAGTAGAAAGGTAGG+AGG - chr6_3:29604209-29604228 None:intergenic 45.0%
CCTCCTACCTTTCTACTAGA+AGG + chr6_3:29604206-29604225 Msa0947100:intron 45.0%
!! ATGCAAGGCAGAAGTATCCA+AGG + chr6_3:29604471-29604490 Msa0947100:intron 45.0%
!! TGCAAGGCAGAAGTATCCAA+GGG + chr6_3:29604472-29604491 Msa0947100:intron 45.0%
GCTTATGACTTCTATGCCCT+TGG - chr6_3:29604491-29604510 None:intergenic 45.0%
AAGTGTGGAAGAGATGAGAC+GGG - chr6_3:29604556-29604575 None:intergenic 45.0%
GAAGTGTGGAAGAGATGAGA+CGG - chr6_3:29604557-29604576 None:intergenic 45.0%
TGTTGGTACTACATAGGCAG+AGG + chr6_3:29604651-29604670 Msa0947100:intron 45.0%
GTTGGTACTACATAGGCAGA+GGG + chr6_3:29604652-29604671 Msa0947100:intron 45.0%
CAGTGTTATGCCTAATGTGC+AGG + chr6_3:29604783-29604802 Msa0947100:intron 45.0%
!! TTGGAAGGTGCTAACTGCTA+AGG - chr6_3:29605223-29605242 None:intergenic 45.0%
TGAGTCGTGAATAGCACATC+TGG - chr6_3:29605389-29605408 None:intergenic 45.0%
! CAGCTGTTCTTTTACCTTGC+AGG + chr6_3:29605411-29605430 Msa0947100:intron 45.0%
! CTTTCATTGGGGTACTTCAC+AGG + chr6_3:29605489-29605508 Msa0947100:CDS 45.0%
!! GAGAGGTTCTAAGCACAAGA+AGG - chr6_3:29605763-29605782 None:intergenic 45.0%
CTTAGAACCTCTCTCCTTTG+TGG + chr6_3:29605770-29605789 Msa0947100:three_prime_UTR 45.0%
AATGTCACCACAAAGGAGAG+AGG - chr6_3:29605780-29605799 None:intergenic 45.0%
GGTTTGCAATGTCACCACAA+AGG - chr6_3:29605787-29605806 None:intergenic 45.0%
TGTGGTGACATTGCAAACCT+TGG + chr6_3:29605788-29605807 Msa0947100:three_prime_UTR 45.0%
TGACATTGCAAACCTTGGAG+TGG + chr6_3:29605793-29605812 Msa0947100:three_prime_UTR 45.0%
! CATATTTCTGCTCCACTCCA+AGG - chr6_3:29605808-29605827 None:intergenic 45.0%
GATGAAGTATGCTTAGTGGC+TGG + chr6_3:29606142-29606161 Msa0947100:three_prime_UTR 45.0%
!! TATGCTTAGTGGCTGGTCTT+TGG + chr6_3:29606149-29606168 Msa0947100:three_prime_UTR 45.0%
! CGTGTGAAGTGCTATCTGAT+TGG + chr6_3:29606358-29606377 Msa0947100:three_prime_UTR 45.0%
TCATCCCTCCGTCTCAAAAA+CGG - chr6_3:29606511-29606530 None:intergenic 45.0%
! TTTGAGACGGAGGGATGATT+TGG + chr6_3:29606513-29606532 Msa0947100:three_prime_UTR 45.0%
!!! TTAATATTCTATTTTATTAA+CGG - chr6_3:29599181-29599200 None:intergenic 5.0%
!! GTTTAATTAATTTATTTAAT+TGG + chr6_3:29599645-29599664 Msa0947100:intron 5.0%
GGCAGAACACAACCATGTAG+AGG + chr6_3:29593968-29593987 Msa0947100:five_prime_UTR 50.0%
!! GCTAGAGGTACTAGCAGCAA+TGG + chr6_3:29594551-29594570 Msa0947100:intron 50.0%
GAAGGTCTGACAAAGGTTGG+AGG + chr6_3:29594927-29594946 Msa0947100:CDS 50.0%
!! CATTGGCTAGCACCGAGTTT+TGG - chr6_3:29595524-29595543 None:intergenic 50.0%
!! CTCGGTGCTAGCCAATGAAT+TGG + chr6_3:29595527-29595546 Msa0947100:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG + chr6_3:29596139-29596158 Msa0947100:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG - chr6_3:29601215-29601234 None:intergenic 50.0%
AGGGACATGAGTGTCCTAGA+TGG - chr6_3:29601214-29601233 None:intergenic 50.0%
CAGGCCATTTACGACCTTCT+AGG + chr6_3:29597960-29597979 Msa0947100:intron 50.0%
TGACGTTAGGATAGTCCTGG+AGG + chr6_3:29597998-29598017 Msa0947100:intron 50.0%
ATAGTCCTGGAGGTCAAGCT+TGG + chr6_3:29598008-29598027 Msa0947100:intron 50.0%
AGGTCAAGCTTGGAGAAGCA+AGG + chr6_3:29598018-29598037 Msa0947100:intron 50.0%
GGAGAAGCAAGGTCGTTTCT+AGG + chr6_3:29598029-29598048 Msa0947100:intron 50.0%
! ACCTTGCTTTAAGTCAGCGG+GGG - chr6_3:29598543-29598562 None:intergenic 50.0%
! CACCTTGCTTTAAGTCAGCG+GGG - chr6_3:29598544-29598563 None:intergenic 50.0%
ACCATGTGTCTCTTGCGTTG+CGG + chr6_3:29600340-29600359 Msa0947100:intron 50.0%
GTTAGCATCAAGCACACCCT+GGG - chr6_3:29600556-29600575 None:intergenic 50.0%
TGTTAGCATCAAGCACACCC+TGG - chr6_3:29600557-29600576 None:intergenic 50.0%
AGACTGATGACCGCATCTCA+TGG + chr6_3:29600924-29600943 Msa0947100:intron 50.0%
GACTGATGACCGCATCTCAT+GGG + chr6_3:29600925-29600944 Msa0947100:intron 50.0%
AGGGACATGAGTGTCCTAGA+TGG + chr6_3:29601214-29601233 Msa0947100:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG + chr6_3:29601215-29601234 Msa0947100:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG - chr6_3:29596139-29596158 None:intergenic 50.0%
!! TGGCTAGCACCAAGTTTTGG+AGG + chr6_3:29601849-29601868 Msa0947100:intron 50.0%
!! TGTTCGTGTGGACTTGCTAG+AGG + chr6_3:29601877-29601896 Msa0947100:intron 50.0%
CGAAAGCTGGAACTGGAAAC+TGG - chr6_3:29601941-29601960 None:intergenic 50.0%
TGGAATCCGAAAGCTGGAAC+TGG - chr6_3:29601948-29601967 None:intergenic 50.0%
GAACTGTGGAATCCGAAAGC+TGG - chr6_3:29601954-29601973 None:intergenic 50.0%
!! CATTGGCTAGCACCGAGTTT+TGG - chr6_3:29595524-29595543 None:intergenic 50.0%
!! CTCGGTGCTAGCCAATGAAT+TGG + chr6_3:29595527-29595546 Msa0947100:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG + chr6_3:29596139-29596158 Msa0947100:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG - chr6_3:29601215-29601234 None:intergenic 50.0%
AGGGACATGAGTGTCCTAGA+TGG - chr6_3:29601214-29601233 None:intergenic 50.0%
GTTTGGATTCACGTGCCTGT+TGG - chr6_3:29603528-29603547 None:intergenic 50.0%
TGATTGGACTGTCCGATGAG+TGG + chr6_3:29603609-29603628 Msa0947100:intron 50.0%
TGTCCGATGAGTGGTGATTC+TGG + chr6_3:29603618-29603637 Msa0947100:intron 50.0%
GTCTTGGGAGGCAATATGCA+AGG + chr6_3:29604456-29604475 Msa0947100:intron 50.0%
AGTGTGGAAGAGATGAGACG+GGG - chr6_3:29604555-29604574 None:intergenic 50.0%
! AACTGGGACGAAGTACTTCC+TGG + chr6_3:29604822-29604841 Msa0947100:CDS 50.0%
ACTGCAGTTGTCTCAACCCT+CGG + chr6_3:29604849-29604868 Msa0947100:CDS 50.0%
TAACGGCGAGGCTAATGTTG+TGG + chr6_3:29604905-29604924 Msa0947100:CDS 50.0%
TGTGCAGGGACTGAATATGC+AGG + chr6_3:29606233-29606252 Msa0947100:three_prime_UTR 50.0%
GCACCAAAACATCATGGCCA+AGG - chr6_3:29606268-29606287 None:intergenic 50.0%
ATTGTTTGCAGCTGCTGCAC+TGG - chr6_3:29606403-29606422 None:intergenic 50.0%
!! CGATGGACTAAGCCAGCAAA+TGG + chr6_3:29606459-29606478 Msa0947100:three_prime_UTR 50.0%
!!! CGACATGGCCGTTTTTGAGA+CGG + chr6_3:29606500-29606519 Msa0947100:three_prime_UTR 50.0%
!!! ATGGCCGTTTTTGAGACGGA+GGG + chr6_3:29606504-29606523 Msa0947100:three_prime_UTR 50.0%
AGCATGAAGCAAGAGGGTGA+TGG + chr6_3:29606651-29606670 Msa0947100:three_prime_UTR 50.0%
GCATGAAGCAAGAGGGTGAT+GGG + chr6_3:29606652-29606671 Msa0947100:three_prime_UTR 50.0%
!! TTGGAGGAGCACTGTTCGTG+TGG - chr6_3:29601865-29601884 None:intergenic 55.0%
!! TGGCTAGCACCGAGTTTTGG+AGG - chr6_3:29595521-29595540 None:intergenic 55.0%
CTTCTCCAAGCTTGACCTCC+AGG - chr6_3:29598016-29598035 None:intergenic 55.0%
! ATAGAAAGTGCACCTCGCGG+AGG - chr6_3:29598297-29598316 None:intergenic 55.0%
TCCGCAACGCAAGAGACACA+TGG - chr6_3:29600344-29600363 None:intergenic 55.0%
!! TTGGAGGAGCACTGTTCGTG+TGG + chr6_3:29601865-29601884 Msa0947100:intron 55.0%
!! TTGGAGGAGCACTGTTCGTG+TGG - chr6_3:29601865-29601884 None:intergenic 55.0%
!! TGGCTAGCACCGAGTTTTGG+AGG - chr6_3:29595521-29595540 None:intergenic 55.0%
! AGAGATGAGACGGGGGTATG+TGG - chr6_3:29604547-29604566 None:intergenic 55.0%
GTGTGGAAGAGATGAGACGG+GGG - chr6_3:29604554-29604573 None:intergenic 55.0%
GAGACAACTGCAGTAGCTCC+AGG - chr6_3:29604843-29604862 None:intergenic 55.0%
! GTCTCAACCCTCGGAGGTTT+TGG + chr6_3:29604858-29604877 Msa0947100:CDS 55.0%
CTCGCTACCAAAACCTCCGA+GGG - chr6_3:29604868-29604887 None:intergenic 55.0%
!!! CATGGCCGTTTTTGAGACGG+AGG + chr6_3:29606503-29606522 Msa0947100:three_prime_UTR 55.0%
!! GCCCCCGCTGACTTAAAGCA+AGG + chr6_3:29598539-29598558 Msa0947100:intron 60.0%
GCAGTTGTCTCAACCCTCGG+AGG + chr6_3:29604852-29604871 Msa0947100:CDS 60.0%
CCTCGCTACCAAAACCTCCG+AGG - chr6_3:29604869-29604888 None:intergenic 60.0%
!!! CCTCGGAGGTTTTGGTAGCG+AGG + chr6_3:29604866-29604885 Msa0947100:CDS 60.0%
GTGTAGGTTTCGCCTCCGCG+AGG + chr6_3:29598282-29598301 Msa0947100:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 29593900 29606852 29593900 ID=Msa0947100;Name=Msa0947100
chr6_3 mRNA 29593900 29606852 29593900 ID=Msa0947100-mRNA-1;Parent=Msa0947100;Name=Msa0947100-mRNA-1;_AED=0.17;_eAED=0.17;_QI=224|0.71|0.87|1|0.42|0.62|8|1021|151
chr6_3 exon 29593900 29593989 29593900 ID=Msa0947100-mRNA-1:exon:7821;Parent=Msa0947100-mRNA-1
chr6_3 exon 29594498 29594557 29594498 ID=Msa0947100-mRNA-1:exon:7822;Parent=Msa0947100-mRNA-1
chr6_3 exon 29594674 29594752 29594674 ID=Msa0947100-mRNA-1:exon:7823;Parent=Msa0947100-mRNA-1
chr6_3 exon 29594899 29594969 29594899 ID=Msa0947100-mRNA-1:exon:7824;Parent=Msa0947100-mRNA-1
chr6_3 exon 29603871 29603963 29603871 ID=Msa0947100-mRNA-1:exon:7825;Parent=Msa0947100-mRNA-1
chr6_3 exon 29604805 29604951 29604805 ID=Msa0947100-mRNA-1:exon:7826;Parent=Msa0947100-mRNA-1
chr6_3 exon 29605433 29605875 29605433 ID=Msa0947100-mRNA-1:exon:7827;Parent=Msa0947100-mRNA-1
chr6_3 exon 29606135 29606852 29606135 ID=Msa0947100-mRNA-1:exon:7828;Parent=Msa0947100-mRNA-1
chr6_3 five_prime_UTR 29593900 29593989 29593900 ID=Msa0947100-mRNA-1:five_prime_utr;Parent=Msa0947100-mRNA-1
chr6_3 five_prime_UTR 29594498 29594557 29594498 ID=Msa0947100-mRNA-1:five_prime_utr;Parent=Msa0947100-mRNA-1
chr6_3 five_prime_UTR 29594674 29594747 29594674 ID=Msa0947100-mRNA-1:five_prime_utr;Parent=Msa0947100-mRNA-1
chr6_3 CDS 29594748 29594752 29594748 ID=Msa0947100-mRNA-1:cds;Parent=Msa0947100-mRNA-1
chr6_3 CDS 29594899 29594969 29594899 ID=Msa0947100-mRNA-1:cds;Parent=Msa0947100-mRNA-1
chr6_3 CDS 29603871 29603963 29603871 ID=Msa0947100-mRNA-1:cds;Parent=Msa0947100-mRNA-1
chr6_3 CDS 29604805 29604951 29604805 ID=Msa0947100-mRNA-1:cds;Parent=Msa0947100-mRNA-1
chr6_3 CDS 29605433 29605572 29605433 ID=Msa0947100-mRNA-1:cds;Parent=Msa0947100-mRNA-1
chr6_3 three_prime_UTR 29605573 29605875 29605573 ID=Msa0947100-mRNA-1:three_prime_utr;Parent=Msa0947100-mRNA-1
chr6_3 three_prime_UTR 29606135 29606852 29606135 ID=Msa0947100-mRNA-1:three_prime_utr;Parent=Msa0947100-mRNA-1
Gene Sequence

>Msa0947100

ATGGGTGTAGAAAGAGTGAATTTGCAGAGTATTGAAGGTCTGACAAAGGTTGGAGGGACTGTTATATGTGTTTCAGCAATTTTGGTTTTGAAGGAGGAATTGGAAAAATGCAGAAGTAAAAATTTTGTGCCAGTTTTGGAAGAGTTTATTCCTTTGAAGAAGAAATGTGGAGATGTTTTTTATGTAAACTGGGACGAAGTACTTCCTGGAGCTACTGCAGTTGTCTCAACCCTCGGAGGTTTTGGTAGCGAGGAACAAATGAGTAAGATTAACGGCGAGGCTAATGTTGTGGCTGTAAATGCTGCAAACGAATATGGAATTCCCAAATTCATATTGATCTCAGTTCATGACTATAACTTACCATCGTTTTTACTTTCATTGGGGTACTTCACAGGAAAAAGAAAAGCAGAATCTGAGGTTCTATCCAAATTCCCTATTCTTTCAGAATCTGAGTGA
Protein sequence

>Msa0947100

MGVERVNLQSIEGLTKVGGTVICVSAILVLKEELEKCRSKNFVPVLEEFIPLKKKCGDVFYVNWDEVLPGATAVVSTLGGFGSEEQMSKINGEANVVAVNAANEYGIPKFILISVHDYNLPSFLLSLGYFTGKRKAESEVLSKFPILSESE*