AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0947040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0947040 MtrunA17_Chr5g0410681 95.604 91 4 0 64 154 117 207 3.34e-49 160
Msa0947040 MtrunA17_Chr3g0136661 52.500 80 37 1 75 154 116 194 8.85e-21 85.9
Msa0947040 MtrunA17_Chr6g0452121 85.000 40 6 0 66 105 4 43 3.86e-18 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0947040 AT1G32220.1 67.273 110 27 1 54 154 92 201 7.17e-47 154
Msa0947040 AT5G10730.1 48.101 79 40 1 75 153 117 194 5.91e-19 81.6
Msa0947040 AT5G15910.2 50.649 77 37 1 77 153 63 138 1.03e-17 77.4
Msa0947040 AT5G15910.1 50.649 77 37 1 77 153 104 179 1.11e-17 77.8

Find 89 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGAGATCAATATGAATT+TGG 0.138307 6_3:-29531219 None:intergenic
TTTAAAATGGAAGTGTTAAT+TGG 0.162170 6_3:-29531629 None:intergenic
GTGAATCGATTGTGTGTTTA+AGG 0.162846 6_3:+29532552 Msa0947040:three_prime_UTR
TTCTGAAACAATAGGGAATT+TGG 0.170765 6_3:-29531321 None:intergenic
CTGATTTGGTCTTCACTATT+AGG 0.172065 6_3:+29532590 Msa0947040:three_prime_UTR
CTCTAATTCTACTGCTAAAT+TGG 0.191909 6_3:-29532212 None:intergenic
GGGACTGTTATATGTGTTTC+AGG 0.193088 6_3:+29528974 Msa0947040:CDS
GAAAATACCTCGATTTAAAA+TGG 0.241903 6_3:-29531642 None:intergenic
TTTGTTTATTGCAGCAATTT+TGG 0.247478 6_3:+29529637 Msa0947040:intron
CTTTCTACTTGCTGTGATCA+TGG 0.290418 6_3:+29528755 Msa0947040:exon
GTCTCAACCCTCGGAGGTTT+TGG 0.299923 6_3:+29530638 Msa0947040:CDS
TTTGAGACGGAGGGATGATT+TGG 0.338071 6_3:+29532294 Msa0947040:three_prime_UTR
AAACCTTGGCCATGATGTTT+TGG 0.353953 6_3:+29532043 Msa0947040:three_prime_UTR
GGAATAAACTCTTCCAAAAC+TGG 0.355348 6_3:-29529704 None:intergenic
AACTGGGACGAAGTACTTCC+TGG 0.372764 6_3:+29530602 Msa0947040:CDS
TTCGTTGAAACGAAAAGGTC+TGG 0.378571 6_3:+29532076 Msa0947040:three_prime_UTR
AATTCAGATTGGTACTCATT+TGG 0.387213 6_3:+29528538 Msa0947040:five_prime_UTR
CACTCAGATTCTGAAACAAT+AGG 0.387450 6_3:-29531329 None:intergenic
ACTGAGATCAATATGAATTT+GGG 0.389375 6_3:-29531218 None:intergenic
ATTGTTTGCAGCTGCTGCAC+TGG 0.391528 6_3:-29532181 None:intergenic
TATGCTTAGTGGCTGGTCTT+TGG 0.392106 6_3:+29531930 Msa0947040:three_prime_UTR
TTTCTACTTGCTGTGATCAT+GGG 0.393138 6_3:+29528756 Msa0947040:exon
CCTCCTACCTTTCTACTAGA+AGG 0.393830 6_3:+29529986 Msa0947040:CDS
CTTAGAACCTATCTCCTTTG+TGG 0.404902 6_3:+29531551 Msa0947040:three_prime_UTR
GTAAATGCTGCAAACGAATA+TGG 0.416823 6_3:+29530710 Msa0947040:CDS
CTTTCATTGGGGTACTTCAC+AGG 0.419164 6_3:+29531269 Msa0947040:CDS
TTGAGCTAAGCAAAATAAAC+AGG 0.423378 6_3:+29527969 Msa0947040:five_prime_UTR
AGGTTTCTTTCGTATTGTGC+AGG 0.427728 6_3:+29531999 Msa0947040:three_prime_UTR
TGTTGAGATATGCACTGATT+TGG 0.431092 6_3:+29532576 Msa0947040:three_prime_UTR
CACAAGAAGGTTTGAAAGGA+TGG 0.446981 6_3:-29531528 None:intergenic
TGTTTCAGAATCTGAGTGAA+TGG 0.454782 6_3:+29531334 Msa0947040:exon
GACAGGAATAGAAGGCTGTA+AGG 0.455272 6_3:-29528727 None:intergenic
CGATGGACTAAGCCAGCAAA+TGG 0.463487 6_3:+29532240 Msa0947040:three_prime_UTR
TAACCACATTTCTTCTTCAA+AGG 0.467136 6_3:-29529725 None:intergenic
ACTCAGATTCTGAAACAATA+GGG 0.475824 6_3:-29531328 None:intergenic
CTTCTAACCTTCTAGTAGAA+AGG 0.486036 6_3:-29529993 None:intergenic
TCTTATGGAGAAATTCAGAT+TGG 0.499128 6_3:+29528527 Msa0947040:five_prime_UTR
ATTGAAAGTCTGACAAAGGT+TGG 0.504916 6_3:+29528950 Msa0947040:CDS
AAGGTAAAGACAGGAATAGA+AGG 0.505628 6_3:-29528735 None:intergenic
GAGACAACTGCAGTAGCTCC+AGG 0.506633 6_3:-29530620 None:intergenic
ATGGCTTCGTTGAAACGAAA+AGG 0.508337 6_3:+29532071 Msa0947040:three_prime_UTR
TGCAGATGAAGTATGCTTAG+TGG 0.508903 6_3:+29531919 Msa0947040:three_prime_UTR
GCAAGTAGAAAGGTAAAGAC+AGG 0.516027 6_3:-29528744 None:intergenic
TTCTACTTGCTGTGATCATG+GGG 0.517355 6_3:+29528757 Msa0947040:exon
ACTAATAAGCATGAAGCAAG+AGG 0.519062 6_3:+29532425 Msa0947040:three_prime_UTR
GCATGAAGCAAGAGGGTGAT+GGG 0.528389 6_3:+29532433 Msa0947040:three_prime_UTR
GAACAAATGAGTGAGATTAA+CGG 0.534767 6_3:+29530668 Msa0947040:CDS
AATGTCACCACAAAGGAGAT+AGG 0.541295 6_3:-29531558 None:intergenic
AATTCTACTGCTAAATTGGT+CGG 0.542804 6_3:-29532208 None:intergenic
TGTAAGGCAGAGGCATAAGT+TGG 0.550513 6_3:-29528711 None:intergenic
TAAGCACAAGAAGGTTTGAA+AGG 0.552078 6_3:-29531532 None:intergenic
TATGCAGGATTTGAAAACCT+TGG 0.552274 6_3:+29532029 Msa0947040:three_prime_UTR
GGTTTCTTTCGTATTGTGCA+GGG 0.552344 6_3:+29532000 Msa0947040:three_prime_UTR
GATAGGTTCTAAGCACAAGA+AGG 0.552733 6_3:-29531541 None:intergenic
TCGTTGAAACGAAAAGGTCT+GGG 0.554472 6_3:+29532077 Msa0947040:three_prime_UTR
CATGATCACAGCAAGTAGAA+AGG 0.554816 6_3:-29528754 None:intergenic
AATAGAAGGCTGTAAGGCAG+AGG 0.568145 6_3:-29528721 None:intergenic
GCACAATACGAAAGAAACCT+TGG 0.571154 6_3:-29531996 None:intergenic
TGTGGTGACATTGCAAACCT+TGG 0.571436 6_3:+29531569 Msa0947040:three_prime_UTR
ACTGCAGTTGTCTCAACCCT+CGG 0.574479 6_3:+29530629 Msa0947040:CDS
CGTGTGAAGTGCTATCTGAT+TGG 0.576364 6_3:+29532139 Msa0947040:three_prime_UTR
AGCATGAAGCAAGAGGGTGA+TGG 0.592902 6_3:+29532432 Msa0947040:three_prime_UTR
GAAAGTCTGACAAAGGTTGG+AGG 0.593605 6_3:+29528953 Msa0947040:CDS
ATTCCTTTGAAGAAGAAATG+TGG 0.598289 6_3:+29529722 Msa0947040:CDS
GATGAAGTATGCTTAGTGGC+TGG 0.599339 6_3:+29531923 Msa0947040:three_prime_UTR
CCATATGCACCAAAACATCA+TGG 0.601139 6_3:-29532052 None:intergenic
TGTGCAGGGACTGAATATGC+AGG 0.602414 6_3:+29532014 Msa0947040:three_prime_UTR
AAAGTCTGACAAAGGTTGGA+GGG 0.606437 6_3:+29528954 Msa0947040:CDS
GCACCAAAACATCATGGCCA+AGG 0.608013 6_3:-29532046 None:intergenic
AGCAAAATAAACAGGAGCAG+AGG 0.611854 6_3:+29527977 Msa0947040:five_prime_UTR
CTCGCTACCAAAACCTCCGA+GGG 0.612537 6_3:-29530645 None:intergenic
TAACCTTCTAGTAGAAAGGT+AGG 0.613210 6_3:-29529989 None:intergenic
TAACGGCGAGGCTAATGTTG+TGG 0.613394 6_3:+29530685 Msa0947040:CDS
CCTTCTAGTAGAAAGGTAGG+AGG 0.623552 6_3:-29529986 None:intergenic
TAAATATGTATACCTCTACA+TGG 0.627927 6_3:-29528010 None:intergenic
TACTCAAGGAGAGTTCATCA+AGG 0.638404 6_3:+29532338 Msa0947040:three_prime_UTR
CTAATAAGCATGAAGCAAGA+GGG 0.643567 6_3:+29532426 Msa0947040:three_prime_UTR
GAGTATTGAAAGTCTGACAA+AGG 0.643899 6_3:+29528946 Msa0947040:CDS
CCTCGCTACCAAAACCTCCG+AGG 0.646053 6_3:-29530646 None:intergenic
ATATGCAGAATTTCATCATG+AGG 0.647471 6_3:+29531957 Msa0947040:three_prime_UTR
ACTGCTGCATCTTATGCAAG+AGG 0.648151 6_3:+29528562 Msa0947040:five_prime_UTR
TAGCGTGTAAGAAATACTCA+AGG 0.649858 6_3:+29532324 Msa0947040:three_prime_UTR
GGCAGAACACAACCATGTAG+AGG 0.661081 6_3:+29527998 Msa0947040:five_prime_UTR
TGACATTGCAAACCTTGGAG+TGG 0.676813 6_3:+29531574 Msa0947040:three_prime_UTR
GTAGAATTAGAGTTCGACGA+TGG 0.679540 6_3:+29532223 Msa0947040:three_prime_UTR
GGTTTGCAATGTCACCACAA+AGG 0.687980 6_3:-29531565 None:intergenic
GCAGTTGTCTCAACCCTCGG+AGG 0.692364 6_3:+29530632 Msa0947040:CDS
AATGAGTGAGATTAACGGCG+AGG 0.703765 6_3:+29530673 Msa0947040:CDS
GCTAAAATACAATGTCGACA+TGG 0.704540 6_3:+29532266 Msa0947040:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATGATTTAAATTTATTTA+TGG + chr6_3:29531129-29531148 Msa0947040:intron 10.0%
!! TGAAAGAAAAAAAAATCAAA+TGG + chr6_3:29528453-29528472 Msa0947040:intron 15.0%
!!! GATTTGAATTTAATTTGATT+TGG + chr6_3:29529089-29529108 Msa0947040:intron 15.0%
!!! TTGTTGTGTTTATAATTTTA+TGG + chr6_3:29529828-29529847 Msa0947040:intron 15.0%
!!! TTATAATTTTATGGTAAGAT+TGG + chr6_3:29529837-29529856 Msa0947040:intron 15.0%
!! TATATAGTGAATTAATTGAT+AGG + chr6_3:29530079-29530098 Msa0947040:intron 15.0%
!!! TTTAACTCAAATTTTCTTAA+TGG - chr6_3:29530481-29530500 None:intergenic 15.0%
!! AGGATAATCATAAAAATTAA+TGG + chr6_3:29532610-29532629 Msa0947040:three_prime_UTR 15.0%
!!! AACTTCATTTTATAAACACA+TGG + chr6_3:29528132-29528151 Msa0947040:intron 20.0%
!!! CATAACATATTTTCTTGATA+AGG - chr6_3:29528330-29528349 None:intergenic 20.0%
!! CTTATCAAGAAAATATGTTA+TGG + chr6_3:29528328-29528347 Msa0947040:intron 20.0%
!!! AATTGTTGTTGAATTTCATT+AGG + chr6_3:29529057-29529076 Msa0947040:intron 20.0%
!!! ATTGTTGTTGAATTTCATTA+GGG + chr6_3:29529058-29529077 Msa0947040:intron 20.0%
!! AATGCAAAACATTAATATCT+AGG - chr6_3:29529362-29529381 None:intergenic 20.0%
!! AATGCATTTATATTGATATG+TGG + chr6_3:29529456-29529475 Msa0947040:intron 20.0%
!!! AAAGGTATCATAAAATCATT+GGG - chr6_3:29529538-29529557 None:intergenic 20.0%
!!! AAAAGGTATCATAAAATCAT+TGG - chr6_3:29529539-29529558 None:intergenic 20.0%
!! TTGAATAAAGTTATCAACTT+TGG + chr6_3:29529577-29529596 Msa0947040:intron 20.0%
!! AACACAACAATAAAATTTCA+AGG - chr6_3:29529818-29529837 None:intergenic 20.0%
!! GAGAATATAGAAGTAAATTA+AGG + chr6_3:29529908-29529927 Msa0947040:intron 20.0%
!! TACAATTTAGTTAGTTAGTT+AGG - chr6_3:29530182-29530201 None:intergenic 20.0%
!!! AGATGTTTTTTATGTAAACT+GGG + chr6_3:29530586-29530605 Msa0947040:CDS 20.0%
!! ACAAAAATGTAAAGAAACAT+TGG - chr6_3:29531022-29531041 None:intergenic 20.0%
!!! ATGTTTCTTTACATTTTTGT+TGG + chr6_3:29531022-29531041 Msa0947040:intron 20.0%
!! TGTATATATACAAACAAAGA+TGG + chr6_3:29531051-29531070 Msa0947040:intron 20.0%
!! TATATGATGTATATTATGTC+TGG + chr6_3:29531091-29531110 Msa0947040:intron 20.0%
!! ATATGATGTATATTATGTCT+GGG + chr6_3:29531092-29531111 Msa0947040:intron 20.0%
!!! CAGTGATTATTTTTTTACAT+AGG - chr6_3:29531361-29531380 None:intergenic 20.0%
!! GTTGTACTAACAAAAAAAAA+AGG + chr6_3:29531403-29531422 Msa0947040:three_prime_UTR 20.0%
!!! TTTAAAATGGAAGTGTTAAT+TGG - chr6_3:29531632-29531651 None:intergenic 20.0%
!! ATTTAGTTGTTACATAGAAT+AGG - chr6_3:29531849-29531868 None:intergenic 20.0%
! TAAATATGTATACCTCTACA+TGG - chr6_3:29528013-29528032 None:intergenic 25.0%
! ATTCTTGGATTCAAGAAATT+TGG - chr6_3:29528273-29528292 None:intergenic 25.0%
!!! TGTAATTCTTTGAAATACCA+AGG - chr6_3:29528303-29528322 None:intergenic 25.0%
!!! TTATGGAGATTATTTTGTCT+TGG + chr6_3:29528345-29528364 Msa0947040:intron 25.0%
! AATAGCAGTTTATAAATCTG+AGG - chr6_3:29528610-29528629 None:intergenic 25.0%
! TGATTTATGATCAGGATATT+TGG + chr6_3:29528648-29528667 Msa0947040:intron 25.0%
! ATATGTGTGCTACAAAAAAA+TGG - chr6_3:29528864-29528883 None:intergenic 25.0%
! ACAAGTGAAACACAAAATTA+GGG - chr6_3:29529128-29529147 None:intergenic 25.0%
! AAAATCATGAAGAATCATGA+AGG + chr6_3:29529165-29529184 Msa0947040:intron 25.0%
! TTTAAAAACTAAACTTTCCG+AGG + chr6_3:29529246-29529265 Msa0947040:intron 25.0%
! TTTGAACCTCAACAAAATTA+AGG - chr6_3:29529297-29529316 None:intergenic 25.0%
!! ATGTTTTGCATTTTTGTGAT+TGG + chr6_3:29529370-29529389 Msa0947040:intron 25.0%
!! TACCTTTTGAATTTTTGATG+TGG + chr6_3:29529551-29529570 Msa0947040:intron 25.0%
!! ACCTTTTGAATTTTTGATGT+GGG + chr6_3:29529552-29529571 Msa0947040:intron 25.0%
!!! TTTGGAGTTTTTGATTCAAT+GGG + chr6_3:29529595-29529614 Msa0947040:intron 25.0%
!! TTTGTTTATTGCAGCAATTT+TGG + chr6_3:29529637-29529656 Msa0947040:intron 25.0%
!!! AGATTGGTTGATTTGAAAAT+AGG + chr6_3:29529853-29529872 Msa0947040:intron 25.0%
! AAATTTCGTGTGATGTATAA+TGG + chr6_3:29529946-29529965 Msa0947040:intron 25.0%
!! TGACTGAGATTTTGTTAAAA+AGG + chr6_3:29530374-29530393 Msa0947040:intron 25.0%
!! CTCAAATTTTCTTAATGGTT+TGG - chr6_3:29530476-29530495 None:intergenic 25.0%
!!! GAGATGTTTTTTATGTAAAC+TGG + chr6_3:29530585-29530604 Msa0947040:CDS 25.0%
! TGCTTATATATGACAGTTAA+TGG - chr6_3:29530839-29530858 None:intergenic 25.0%
! ATTAACTGTCATATATAAGC+AGG + chr6_3:29530838-29530857 Msa0947040:intron 25.0%
! AAGTTGAATGTTTACAGATA+TGG + chr6_3:29530916-29530935 Msa0947040:intron 25.0%
! AAATGTAAAGAAACATTGGA+AGG - chr6_3:29531018-29531037 None:intergenic 25.0%
! ACTGAGATCAATATGAATTT+GGG - chr6_3:29531221-29531240 None:intergenic 25.0%
! AACTGAGATCAATATGAATT+TGG - chr6_3:29531222-29531241 None:intergenic 25.0%
!!! GAAGTGTTAATTGGATTTTA+GGG - chr6_3:29531623-29531642 None:intergenic 25.0%
! GAAAATACCTCGATTTAAAA+TGG - chr6_3:29531645-29531664 None:intergenic 25.0%
! AAAAACAGAACACAAGAAAA+AGG - chr6_3:29531711-29531730 None:intergenic 25.0%
!! ATTTTTCATGTCCATATTAC+AGG + chr6_3:29531805-29531824 Msa0947040:intron 25.0%
!! TTTTTCATGTCCATATTACA+GGG + chr6_3:29531806-29531825 Msa0947040:intron 25.0%
!!! GCTTTTTTGAATTTTTACTC+TGG + chr6_3:29532398-29532417 Msa0947040:three_prime_UTR 25.0%
! GTTTTTCTCTACTATGTTGT+AGG + chr6_3:29527934-29527953 Msa0947040:five_prime_UTR 30.0%
TTGAGCTAAGCAAAATAAAC+AGG + chr6_3:29527969-29527988 Msa0947040:five_prime_UTR 30.0%
ACATACTCATCAAATAGTGA+AGG - chr6_3:29528109-29528128 None:intergenic 30.0%
TTTACTAAAGCCGAAATTGT+TGG + chr6_3:29528160-29528179 Msa0947040:intron 30.0%
!! TCAAGAAATTTGGTTTGGTT+TGG - chr6_3:29528263-29528282 None:intergenic 30.0%
TGGATTCAAGAAATTTGGTT+TGG - chr6_3:29528268-29528287 None:intergenic 30.0%
!! TCTTTGAAATACCAAGGAAA+TGG - chr6_3:29528297-29528316 None:intergenic 30.0%
! TGTTACTGATTGCAAATTGA+GGG + chr6_3:29528374-29528393 Msa0947040:intron 30.0%
! TGCATGTGTTTTATATGATG+AGG + chr6_3:29528422-29528441 Msa0947040:intron 30.0%
CATGTACATTTAGAAATCTG+AGG - chr6_3:29528486-29528505 None:intergenic 30.0%
! CATGTGTTTTACAATTTTGC+AGG + chr6_3:29528502-29528521 Msa0947040:intron 30.0%
! ACAATTTTGCAGGTTTCTTA+TGG + chr6_3:29528512-29528531 Msa0947040:intron 30.0%
TCTTATGGAGAAATTCAGAT+TGG + chr6_3:29528527-29528546 Msa0947040:five_prime_UTR 30.0%
AATTCAGATTGGTACTCATT+TGG + chr6_3:29528538-29528557 Msa0947040:five_prime_UTR 30.0%
!! CTCTCTATTGATTTATGATC+AGG + chr6_3:29528640-29528659 Msa0947040:intron 30.0%
!! ACCTAACTGTTGTTTCTTTA+TGG + chr6_3:29528672-29528691 Msa0947040:intron 30.0%
ACCATAAAGAAACAACAGTT+AGG - chr6_3:29528676-29528695 None:intergenic 30.0%
!! CTGTTGTTTCTTTATGGTTT+AGG + chr6_3:29528678-29528697 Msa0947040:intron 30.0%
CACACATATGCATAAAGTAA+TGG + chr6_3:29528875-29528894 Msa0947040:intron 30.0%
!! TGTTTCAGGTTCCATATTTA+TGG + chr6_3:29528988-29529007 Msa0947040:intron 30.0%
GCGATACAAAACCATAAATA+TGG - chr6_3:29529002-29529021 None:intergenic 30.0%
CACAAGTGAAACACAAAATT+AGG - chr6_3:29529129-29529148 None:intergenic 30.0%
! CTAATTTTGTGTTTCACTTG+TGG + chr6_3:29529127-29529146 Msa0947040:intron 30.0%
! TGTCACTACGATTCTAAAAA+AGG - chr6_3:29529274-29529293 None:intergenic 30.0%
! CCACACTATTACTGTAATTT+TGG - chr6_3:29529327-29529346 None:intergenic 30.0%
CCAAAATTACAGTAATAGTG+TGG + chr6_3:29529324-29529343 Msa0947040:intron 30.0%
! TAAAGTATCTTCTCCAAGAA+AGG - chr6_3:29529482-29529501 None:intergenic 30.0%
TTTCTTGGAGAAGATACTTT+AGG + chr6_3:29529481-29529500 Msa0947040:intron 30.0%
TTCTTGGAGAAGATACTTTA+GGG + chr6_3:29529482-29529501 Msa0947040:intron 30.0%
ACCCACATCAAAAATTCAAA+AGG - chr6_3:29529556-29529575 None:intergenic 30.0%
!!! CTTTGGAGTTTTTGATTCAA+TGG + chr6_3:29529594-29529613 Msa0947040:intron 30.0%
!! TTGGAGTTTTTGATTCAATG+GGG + chr6_3:29529596-29529615 Msa0947040:intron 30.0%
! TAAAAATTGTGTGCCAGTTT+TGG + chr6_3:29529691-29529710 Msa0947040:CDS 30.0%
! ATTCCTTTGAAGAAGAAATG+TGG + chr6_3:29529722-29529741 Msa0947040:CDS 30.0%
TAACCACATTTCTTCTTCAA+AGG - chr6_3:29529728-29529747 None:intergenic 30.0%
AGAAATGTGGTTAATGTATG+AGG + chr6_3:29529735-29529754 Msa0947040:intron 30.0%
CATATAACATGAATTGCAAG+AGG - chr6_3:29529765-29529784 None:intergenic 30.0%
TGATATGTAGATTGTAGTCT+TGG + chr6_3:29530220-29530239 Msa0947040:intron 30.0%
GATATGTAGATTGTAGTCTT+GGG + chr6_3:29530221-29530240 Msa0947040:intron 30.0%
TAGAAGTCATAAGCTTAAAC+AGG + chr6_3:29530277-29530296 Msa0947040:intron 30.0%
ACACAAAAACAAAAGAAGTG+TGG - chr6_3:29530351-29530370 None:intergenic 30.0%
! GAGATTTTGTTAAAAAGGTC+AGG + chr6_3:29530379-29530398 Msa0947040:intron 30.0%
!! GAATTTGAGTATCGTTTTTC+TGG + chr6_3:29530531-29530550 Msa0947040:intron 30.0%
GAACAAATGAGTGAGATTAA+CGG + chr6_3:29530668-29530687 Msa0947040:CDS 30.0%
AATGTTTACAGATATGGAGA+TGG + chr6_3:29530922-29530941 Msa0947040:intron 30.0%
! TTCTTTACATTTTTGTTGGC+TGG + chr6_3:29531026-29531045 Msa0947040:intron 30.0%
!! ACCATCGTTTTTACTTTCAT+TGG + chr6_3:29531256-29531275 Msa0947040:CDS 30.0%
!! CCATCGTTTTTACTTTCATT+GGG + chr6_3:29531257-29531276 Msa0947040:CDS 30.0%
!! CATCGTTTTTACTTTCATTG+GGG + chr6_3:29531258-29531277 Msa0947040:CDS 30.0%
AAAAAGAAAAGCAGAATCTG+AGG + chr6_3:29531292-29531311 Msa0947040:CDS 30.0%
!! TTCTGAAACAATAGGGAATT+TGG - chr6_3:29531324-29531343 None:intergenic 30.0%
!! ACTCAGATTCTGAAACAATA+GGG - chr6_3:29531331-29531350 None:intergenic 30.0%
! GTTGTCAAGTATTCTCTTTT+AGG + chr6_3:29531503-29531522 Msa0947040:three_prime_UTR 30.0%
!!! GGAAGTGTTAATTGGATTTT+AGG - chr6_3:29531624-29531643 None:intergenic 30.0%
! AACACTTCCATTTTAAATCG+AGG + chr6_3:29531635-29531654 Msa0947040:three_prime_UTR 30.0%
CTGCAACAGTTTATAAAGTA+TGG + chr6_3:29531870-29531889 Msa0947040:intron 30.0%
ATATGCAGAATTTCATCATG+AGG + chr6_3:29531957-29531976 Msa0947040:three_prime_UTR 30.0%
AATTCTACTGCTAAATTGGT+CGG - chr6_3:29532211-29532230 None:intergenic 30.0%
CTCTAATTCTACTGCTAAAT+TGG - chr6_3:29532215-29532234 None:intergenic 30.0%
CCAGTTATCACCAACAATTT+CGG - chr6_3:29528173-29528192 None:intergenic 35.0%
ATCCAAGAATTCCATTTCCT+TGG + chr6_3:29528283-29528302 Msa0947040:intron 35.0%
TACCAAGGAAATGGAATTCT+TGG - chr6_3:29528288-29528307 None:intergenic 35.0%
!! GAGATTATTTTGTCTTGGCT+TGG + chr6_3:29528350-29528369 Msa0947040:intron 35.0%
! CTGTTACTGATTGCAAATTG+AGG + chr6_3:29528373-29528392 Msa0947040:intron 35.0%
AAGGTAAAGACAGGAATAGA+AGG - chr6_3:29528738-29528757 None:intergenic 35.0%
!! TTTCTACTTGCTGTGATCAT+GGG + chr6_3:29528756-29528775 Msa0947040:exon 35.0%
GCAAATTCACTCTTTCTACA+CGG - chr6_3:29528925-29528944 None:intergenic 35.0%
!! GAGTATTGAAAGTCTGACAA+AGG + chr6_3:29528946-29528965 Msa0947040:CDS 35.0%
ATTGAAAGTCTGACAAAGGT+TGG + chr6_3:29528950-29528969 Msa0947040:CDS 35.0%
! CAATTTCTGTCATTTGTGTG+TGG - chr6_3:29529042-29529061 None:intergenic 35.0%
! GTGACACCTTAATTTTGTTG+AGG + chr6_3:29529288-29529307 Msa0947040:intron 35.0%
ATTATGTTGTTGTCTTCCTC+AGG - chr6_3:29529434-29529453 None:intergenic 35.0%
TATTGATATGTGGCCTTTCT+TGG + chr6_3:29529466-29529485 Msa0947040:intron 35.0%
!!! TGCAGCAATTTTGGTTTTGA+AGG + chr6_3:29529646-29529665 Msa0947040:intron 35.0%
!!! AGCAATTTTGGTTTTGAAGG+AGG + chr6_3:29529649-29529668 Msa0947040:intron 35.0%
!!! TTTGGTTTTGAAGGAGGAAT+TGG + chr6_3:29529655-29529674 Msa0947040:CDS 35.0%
GGAATAAACTCTTCCAAAAC+TGG - chr6_3:29529707-29529726 None:intergenic 35.0%
TAACCTTCTAGTAGAAAGGT+AGG - chr6_3:29529992-29530011 None:intergenic 35.0%
CTTCTAACCTTCTAGTAGAA+AGG - chr6_3:29529996-29530015 None:intergenic 35.0%
GTTCTACTTACTCAGATTCA+TGG + chr6_3:29530404-29530423 Msa0947040:intron 35.0%
AGAGGGAGACAAAAAATCTA+TGG + chr6_3:29530449-29530468 Msa0947040:intron 35.0%
GAGGGAGACAAAAAATCTAT+GGG + chr6_3:29530450-29530469 Msa0947040:intron 35.0%
AAAAACATCTCCTGCACATT+AGG - chr6_3:29530576-29530595 None:intergenic 35.0%
GTAAATGCTGCAAACGAATA+TGG + chr6_3:29530710-29530729 Msa0947040:CDS 35.0%
CAAAATAACGCTCAATGAGA+TGG - chr6_3:29530740-29530759 None:intergenic 35.0%
!! GTTGTTATGTGCTGTTTACA+AGG + chr6_3:29530796-29530815 Msa0947040:intron 35.0%
CTAACTGCTAAGGCTATATT+TGG - chr6_3:29530993-29531012 None:intergenic 35.0%
CAAAGATGGTTTGATGCTTA+TGG + chr6_3:29531065-29531084 Msa0947040:intron 35.0%
CCCAATGAAAGTAAAAACGA+TGG - chr6_3:29531260-29531279 None:intergenic 35.0%
!! CACTCAGATTCTGAAACAAT+AGG - chr6_3:29531332-29531351 None:intergenic 35.0%
TGTTTCAGAATCTGAGTGAA+TGG + chr6_3:29531334-29531353 Msa0947040:exon 35.0%
TAAGCACAAGAAGGTTTGAA+AGG - chr6_3:29531535-29531554 None:intergenic 35.0%
TATGCAGGATTTGAAAACCT+TGG + chr6_3:29532029-29532048 Msa0947040:three_prime_UTR 35.0%
!!! TATTTTAGCTCTCCATTTGC+TGG - chr6_3:29532255-29532274 None:intergenic 35.0%
GCTAAAATACAATGTCGACA+TGG + chr6_3:29532266-29532285 Msa0947040:three_prime_UTR 35.0%
TAGCGTGTAAGAAATACTCA+AGG + chr6_3:29532324-29532343 Msa0947040:three_prime_UTR 35.0%
!!! TTTTAGAGTTCCAGAAGCAA+TGG + chr6_3:29532376-29532395 Msa0947040:three_prime_UTR 35.0%
TTCAAAAAAGCCATTGCTTC+TGG - chr6_3:29532389-29532408 None:intergenic 35.0%
ACTAATAAGCATGAAGCAAG+AGG + chr6_3:29532425-29532444 Msa0947040:three_prime_UTR 35.0%
CTAATAAGCATGAAGCAAGA+GGG + chr6_3:29532426-29532445 Msa0947040:three_prime_UTR 35.0%
GTGAATCGATTGTGTGTTTA+AGG + chr6_3:29532552-29532571 Msa0947040:three_prime_UTR 35.0%
!! TGTTGAGATATGCACTGATT+TGG + chr6_3:29532576-29532595 Msa0947040:three_prime_UTR 35.0%
!! CTGATTTGGTCTTCACTATT+AGG + chr6_3:29532590-29532609 Msa0947040:three_prime_UTR 35.0%
AGCAAAATAAACAGGAGCAG+AGG + chr6_3:29527977-29527996 Msa0947040:five_prime_UTR 40.0%
!! CCGAAATTGTTGGTGATAAC+TGG + chr6_3:29528170-29528189 Msa0947040:intron 40.0%
ATGACAATGCTGCACGAATT+TGG - chr6_3:29528213-29528232 None:intergenic 40.0%
GCAAGTAGAAAGGTAAAGAC+AGG - chr6_3:29528747-29528766 None:intergenic 40.0%
CATGATCACAGCAAGTAGAA+AGG - chr6_3:29528757-29528776 None:intergenic 40.0%
!! CTTTCTACTTGCTGTGATCA+TGG + chr6_3:29528755-29528774 Msa0947040:exon 40.0%
!! TTCTACTTGCTGTGATCATG+GGG + chr6_3:29528757-29528776 Msa0947040:exon 40.0%
AAAGTCTGACAAAGGTTGGA+GGG + chr6_3:29528954-29528973 Msa0947040:CDS 40.0%
GGGACTGTTATATGTGTTTC+AGG + chr6_3:29528974-29528993 Msa0947040:CDS 40.0%
TGTGTGTGGTGTATTAACGA+TGG - chr6_3:29529028-29529047 None:intergenic 40.0%
GCTGTCTGAATTGATGTCTT+TGG + chr6_3:29529190-29529209 Msa0947040:intron 40.0%
GTCTGAATTGATGTCTTTGG+TGG + chr6_3:29529193-29529212 Msa0947040:intron 40.0%
! CGATTCTAAAAAAGGAGCCT+CGG - chr6_3:29529266-29529285 None:intergenic 40.0%
ATACCAGAATCACCACTCAT+CGG - chr6_3:29529401-29529420 None:intergenic 40.0%
!! TGGTATATCTGCTTTTCCTG+AGG + chr6_3:29529415-29529434 Msa0947040:intron 40.0%
!! TTTTGATTCAATGGGGCTGA+TGG + chr6_3:29529603-29529622 Msa0947040:intron 40.0%
TTTGATTCAATGGGGCTGAT+GGG + chr6_3:29529604-29529623 Msa0947040:intron 40.0%
! ATGTAGATTGTAGTCTTGGG+AGG + chr6_3:29530224-29530243 Msa0947040:intron 40.0%
CTCAGATTCATGGATAGTGT+TGG + chr6_3:29530414-29530433 Msa0947040:intron 40.0%
!! GGATAGTGTTGGTACTACAT+AGG + chr6_3:29530425-29530444 Msa0947040:intron 40.0%
TAGTGTTATGCCTAATGTGC+AGG + chr6_3:29530563-29530582 Msa0947040:intron 40.0%
AGCACATAACAACGCTCTAA+AGG - chr6_3:29530789-29530808 None:intergenic 40.0%
TGAATTTGGGAATTCCTGCA+AGG - chr6_3:29531208-29531227 None:intergenic 40.0%
CACAAGAAGGTTTGAAAGGA+TGG - chr6_3:29531531-29531550 None:intergenic 40.0%
!! GATAGGTTCTAAGCACAAGA+AGG - chr6_3:29531544-29531563 None:intergenic 40.0%
CTTAGAACCTATCTCCTTTG+TGG + chr6_3:29531551-29531570 Msa0947040:three_prime_UTR 40.0%
AATGTCACCACAAAGGAGAT+AGG - chr6_3:29531561-29531580 None:intergenic 40.0%
!! CATATTTTTGCTCCACTCCA+AGG - chr6_3:29531589-29531608 None:intergenic 40.0%
TTCATGTCCATATTACAGGG+CGG + chr6_3:29531809-29531828 Msa0947040:intron 40.0%
ATTTGAACCGCCCTGTAATA+TGG - chr6_3:29531819-29531838 None:intergenic 40.0%
TGCAGATGAAGTATGCTTAG+TGG + chr6_3:29531919-29531938 Msa0947040:three_prime_UTR 40.0%
!!! GCGCTGTTTTTTTCTTTCCA+AGG + chr6_3:29531979-29531998 Msa0947040:three_prime_UTR 40.0%
GCACAATACGAAAGAAACCT+TGG - chr6_3:29531999-29532018 None:intergenic 40.0%
AGGTTTCTTTCGTATTGTGC+AGG + chr6_3:29531999-29532018 Msa0947040:three_prime_UTR 40.0%
GGTTTCTTTCGTATTGTGCA+GGG + chr6_3:29532000-29532019 Msa0947040:three_prime_UTR 40.0%
! AAACCTTGGCCATGATGTTT+TGG + chr6_3:29532043-29532062 Msa0947040:three_prime_UTR 40.0%
CCATATGCACCAAAACATCA+TGG - chr6_3:29532055-29532074 None:intergenic 40.0%
!!! CCATGATGTTTTGGTGCATA+TGG + chr6_3:29532052-29532071 Msa0947040:three_prime_UTR 40.0%
ATGGCTTCGTTGAAACGAAA+AGG + chr6_3:29532071-29532090 Msa0947040:three_prime_UTR 40.0%
TTCGTTGAAACGAAAAGGTC+TGG + chr6_3:29532076-29532095 Msa0947040:three_prime_UTR 40.0%
TCGTTGAAACGAAAAGGTCT+GGG + chr6_3:29532077-29532096 Msa0947040:three_prime_UTR 40.0%
GTAGAATTAGAGTTCGACGA+TGG + chr6_3:29532223-29532242 Msa0947040:three_prime_UTR 40.0%
TACTCAAGGAGAGTTCATCA+AGG + chr6_3:29532338-29532357 Msa0947040:three_prime_UTR 40.0%
! CTCTAAAAAACAGCAGGTCT+TGG - chr6_3:29532364-29532383 None:intergenic 40.0%
! CTGGAACTCTAAAAAACAGC+AGG - chr6_3:29532370-29532389 None:intergenic 40.0%
TGCAAATTGAGGGCTCTACA+TGG + chr6_3:29528384-29528403 Msa0947040:intron 45.0%
ACTGCTGCATCTTATGCAAG+AGG + chr6_3:29528562-29528581 Msa0947040:five_prime_UTR 45.0%
! TGTAAGGCAGAGGCATAAGT+TGG - chr6_3:29528714-29528733 None:intergenic 45.0%
AATAGAAGGCTGTAAGGCAG+AGG - chr6_3:29528724-29528743 None:intergenic 45.0%
GACAGGAATAGAAGGCTGTA+AGG - chr6_3:29528730-29528749 None:intergenic 45.0%
GAAAGTCTGACAAAGGTTGG+AGG + chr6_3:29528953-29528972 Msa0947040:CDS 45.0%
CCTTCTAGTAGAAAGGTAGG+AGG - chr6_3:29529989-29530008 None:intergenic 45.0%
CCTCCTACCTTTCTACTAGA+AGG + chr6_3:29529986-29530005 Msa0947040:CDS 45.0%
!! ATGCAAGGCAGAAGTATCCA+AGG + chr6_3:29530251-29530270 Msa0947040:intron 45.0%
!! TGCAAGGCAGAAGTATCCAA+GGG + chr6_3:29530252-29530271 Msa0947040:intron 45.0%
GCTTATGACTTCTATGCCCT+TGG - chr6_3:29530271-29530290 None:intergenic 45.0%
AAGTGTGGAAGAGATGAGAC+GGG - chr6_3:29530336-29530355 None:intergenic 45.0%
GAAGTGTGGAAGAGATGAGA+CGG - chr6_3:29530337-29530356 None:intergenic 45.0%
TGTTGGTACTACATAGGCAG+AGG + chr6_3:29530431-29530450 Msa0947040:intron 45.0%
GTTGGTACTACATAGGCAGA+GGG + chr6_3:29530432-29530451 Msa0947040:intron 45.0%
AATGAGTGAGATTAACGGCG+AGG + chr6_3:29530673-29530692 Msa0947040:CDS 45.0%
!! TTGGAAGGTGCTAACTGCTA+AGG - chr6_3:29531003-29531022 None:intergenic 45.0%
TGAGTCGTGAATAGCACATC+TGG - chr6_3:29531169-29531188 None:intergenic 45.0%
! CAGCTGTTCTTTTACCTTGC+AGG + chr6_3:29531191-29531210 Msa0947040:intron 45.0%
! CTTTCATTGGGGTACTTCAC+AGG + chr6_3:29531269-29531288 Msa0947040:CDS 45.0%
GGTTTGCAATGTCACCACAA+AGG - chr6_3:29531568-29531587 None:intergenic 45.0%
TGTGGTGACATTGCAAACCT+TGG + chr6_3:29531569-29531588 Msa0947040:three_prime_UTR 45.0%
TGACATTGCAAACCTTGGAG+TGG + chr6_3:29531574-29531593 Msa0947040:three_prime_UTR 45.0%
GATGAAGTATGCTTAGTGGC+TGG + chr6_3:29531923-29531942 Msa0947040:three_prime_UTR 45.0%
!! TATGCTTAGTGGCTGGTCTT+TGG + chr6_3:29531930-29531949 Msa0947040:three_prime_UTR 45.0%
! CGTGTGAAGTGCTATCTGAT+TGG + chr6_3:29532139-29532158 Msa0947040:three_prime_UTR 45.0%
TCATCCCTCCGTCTCAAAAA+CGG - chr6_3:29532292-29532311 None:intergenic 45.0%
! TTTGAGACGGAGGGATGATT+TGG + chr6_3:29532294-29532313 Msa0947040:three_prime_UTR 45.0%
GGCAGAACACAACCATGTAG+AGG + chr6_3:29527998-29528017 Msa0947040:five_prime_UTR 50.0%
!! GCAAGAGGTACTAGCAGCAA+TGG + chr6_3:29528577-29528596 Msa0947040:intron 50.0%
TGATTGGACTGTCCGATGAG+TGG + chr6_3:29529386-29529405 Msa0947040:intron 50.0%
TGTCCGATGAGTGGTGATTC+TGG + chr6_3:29529395-29529414 Msa0947040:intron 50.0%
GTCTTGGGAGGCAATATGCA+AGG + chr6_3:29530236-29530255 Msa0947040:intron 50.0%
AGTGTGGAAGAGATGAGACG+GGG - chr6_3:29530335-29530354 None:intergenic 50.0%
! AACTGGGACGAAGTACTTCC+TGG + chr6_3:29530602-29530621 Msa0947040:CDS 50.0%
ACTGCAGTTGTCTCAACCCT+CGG + chr6_3:29530629-29530648 Msa0947040:CDS 50.0%
TAACGGCGAGGCTAATGTTG+TGG + chr6_3:29530685-29530704 Msa0947040:CDS 50.0%
TGTGCAGGGACTGAATATGC+AGG + chr6_3:29532014-29532033 Msa0947040:three_prime_UTR 50.0%
GCACCAAAACATCATGGCCA+AGG - chr6_3:29532049-29532068 None:intergenic 50.0%
ATTGTTTGCAGCTGCTGCAC+TGG - chr6_3:29532184-29532203 None:intergenic 50.0%
!! CGATGGACTAAGCCAGCAAA+TGG + chr6_3:29532240-29532259 Msa0947040:three_prime_UTR 50.0%
!!! CGACATGGCCGTTTTTGAGA+CGG + chr6_3:29532281-29532300 Msa0947040:three_prime_UTR 50.0%
!!! ATGGCCGTTTTTGAGACGGA+GGG + chr6_3:29532285-29532304 Msa0947040:three_prime_UTR 50.0%
AGCATGAAGCAAGAGGGTGA+TGG + chr6_3:29532432-29532451 Msa0947040:three_prime_UTR 50.0%
GCATGAAGCAAGAGGGTGAT+GGG + chr6_3:29532433-29532452 Msa0947040:three_prime_UTR 50.0%
! AGAGATGAGACGGGGGTATG+TGG - chr6_3:29530327-29530346 None:intergenic 55.0%
GTGTGGAAGAGATGAGACGG+GGG - chr6_3:29530334-29530353 None:intergenic 55.0%
GAGACAACTGCAGTAGCTCC+AGG - chr6_3:29530623-29530642 None:intergenic 55.0%
! GTCTCAACCCTCGGAGGTTT+TGG + chr6_3:29530638-29530657 Msa0947040:CDS 55.0%
CTCGCTACCAAAACCTCCGA+GGG - chr6_3:29530648-29530667 None:intergenic 55.0%
!!! CATGGCCGTTTTTGAGACGG+AGG + chr6_3:29532284-29532303 Msa0947040:three_prime_UTR 55.0%
GCAGTTGTCTCAACCCTCGG+AGG + chr6_3:29530632-29530651 Msa0947040:CDS 60.0%
CCTCGCTACCAAAACCTCCG+AGG - chr6_3:29530649-29530668 None:intergenic 60.0%
!!! CCTCGGAGGTTTTGGTAGCG+AGG + chr6_3:29530646-29530665 Msa0947040:CDS 60.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 29527930 29532633 29527930 ID=Msa0947040;Name=Msa0947040
chr6_3 mRNA 29527930 29532633 29527930 ID=Msa0947040-mRNA-1;Parent=Msa0947040;Name=Msa0947040-mRNA-1;_AED=0.21;_eAED=0.23;_QI=224|0.5|0.66|1|0.87|0.77|9|1022|160
chr6_3 exon 29527930 29528019 29527930 ID=Msa0947040-mRNA-1:exon:7800;Parent=Msa0947040-mRNA-1
chr6_3 exon 29528524 29528583 29528524 ID=Msa0947040-mRNA-1:exon:7801;Parent=Msa0947040-mRNA-1
chr6_3 exon 29528700 29528778 29528700 ID=Msa0947040-mRNA-1:exon:7802;Parent=Msa0947040-mRNA-1
chr6_3 exon 29528934 29528995 29528934 ID=Msa0947040-mRNA-1:exon:7803;Parent=Msa0947040-mRNA-1
chr6_3 exon 29529651 29529743 29529651 ID=Msa0947040-mRNA-1:exon:7804;Parent=Msa0947040-mRNA-1
chr6_3 exon 29529972 29530007 29529972 ID=Msa0947040-mRNA-1:exon:7805;Parent=Msa0947040-mRNA-1
chr6_3 exon 29530585 29530731 29530585 ID=Msa0947040-mRNA-1:exon:7806;Parent=Msa0947040-mRNA-1
chr6_3 exon 29531213 29531656 29531213 ID=Msa0947040-mRNA-1:exon:7807;Parent=Msa0947040-mRNA-1
chr6_3 exon 29531916 29532633 29531916 ID=Msa0947040-mRNA-1:exon:7808;Parent=Msa0947040-mRNA-1
chr6_3 five_prime_UTR 29527930 29528019 29527930 ID=Msa0947040-mRNA-1:five_prime_utr;Parent=Msa0947040-mRNA-1
chr6_3 five_prime_UTR 29528524 29528583 29528524 ID=Msa0947040-mRNA-1:five_prime_utr;Parent=Msa0947040-mRNA-1
chr6_3 five_prime_UTR 29528700 29528773 29528700 ID=Msa0947040-mRNA-1:five_prime_utr;Parent=Msa0947040-mRNA-1
chr6_3 CDS 29528774 29528778 29528774 ID=Msa0947040-mRNA-1:cds;Parent=Msa0947040-mRNA-1
chr6_3 CDS 29528934 29528995 29528934 ID=Msa0947040-mRNA-1:cds;Parent=Msa0947040-mRNA-1
chr6_3 CDS 29529651 29529743 29529651 ID=Msa0947040-mRNA-1:cds;Parent=Msa0947040-mRNA-1
chr6_3 CDS 29529972 29530007 29529972 ID=Msa0947040-mRNA-1:cds;Parent=Msa0947040-mRNA-1
chr6_3 CDS 29530585 29530731 29530585 ID=Msa0947040-mRNA-1:cds;Parent=Msa0947040-mRNA-1
chr6_3 CDS 29531213 29531352 29531213 ID=Msa0947040-mRNA-1:cds;Parent=Msa0947040-mRNA-1
chr6_3 three_prime_UTR 29531353 29531656 29531353 ID=Msa0947040-mRNA-1:three_prime_utr;Parent=Msa0947040-mRNA-1
chr6_3 three_prime_UTR 29531916 29532633 29531916 ID=Msa0947040-mRNA-1:three_prime_utr;Parent=Msa0947040-mRNA-1
Gene Sequence

>Msa0947040

ATGGGAGTGAATTTGCAGAGTATTGAAAGTCTGACAAAGGTTGGAGGGACTGTTATATGTGTTTCAGCAATTTTGGTTTTGAAGGAGGAATTGGAAAAATGCAGAAGTAAAAATTGTGTGCCAGTTTTGGAAGAGTTTATTCCTTTGAAGAAGAAATGTGTTTCGTCGTCGTCTCCTCCTACCTTTCTACTAGAAGGAGATGTTTTTTATGTAAACTGGGACGAAGTACTTCCTGGAGCTACTGCAGTTGTCTCAACCCTCGGAGGTTTTGGTAGCGAGGAACAAATGAGTGAGATTAACGGCGAGGCTAATGTTGTGGCTGTAAATGCTGCAAACGAATATGGAATTCCCAAATTCATATTGATCTCAGTTCATGACTATAACTTACCATCGTTTTTACTTTCATTGGGGTACTTCACAGGAAAAAGAAAAGCAGAATCTGAGGTTCTATCCAAATTCCCTATTGTTTCAGAATCTGAGTGA
Protein sequence

>Msa0947040

MGVNLQSIESLTKVGGTVICVSAILVLKEELEKCRSKNCVPVLEEFIPLKKKCVSSSSPPTFLLEGDVFYVNWDEVLPGATAVVSTLGGFGSEEQMSEINGEANVVAVNAANEYGIPKFILISVHDYNLPSFLLSLGYFTGKRKAESEVLSKFPIVSESE*