AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0947080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0947080 MtrunA17_Chr5g0410681 96.703 91 3 0 67 157 117 207 6.12e-58 182
Msa0947080 MtrunA17_Chr3g0136661 53.750 80 36 1 78 157 116 194 2.79e-21 87.4
Msa0947080 MtrunA17_Chr6g0452121 87.500 40 5 0 69 108 4 43 8.79e-19 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0947080 AT1G32220.1 67.273 110 27 1 57 157 92 201 6.74e-47 154
Msa0947080 AT5G10730.1 49.367 79 39 1 78 156 117 194 2.26e-19 82.8
Msa0947080 AT5G15910.2 50.649 77 37 1 80 156 63 138 5.69e-18 78.2
Msa0947080 AT5G15910.1 50.649 77 37 1 80 156 104 179 6.94e-18 78.6

Find 93 sgRNAs with CRISPR-Local

Find 743 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGAGATCAATATGAATT+TGG 0.138307 6_3:-29574340 None:intergenic
TTTAAAATGGAAGTGTTAAT+TGG 0.162170 6_3:-29574749 None:intergenic
GGAAGTGTTAATTGGATTTC+AGG 0.162392 6_3:-29574741 None:intergenic
CTGATTTGGTCTTCACTATT+AGG 0.172065 6_3:+29575710 Msa0947080:three_prime_UTR
GTGACTCGATTGTGTGTTTA+AGG 0.185242 6_3:+29575672 Msa0947080:three_prime_UTR
CTCTAATTCTACTGCTAAAT+TGG 0.191909 6_3:-29575332 None:intergenic
GGGACTGTTATATGTGTTTC+AGG 0.193088 6_3:+29563849 Msa0947080:CDS
TTCTGAAAGAATAGGGAATT+TGG 0.232650 6_3:-29574442 None:intergenic
GAAAATACCTCGATTTAAAA+TGG 0.241903 6_3:-29574762 None:intergenic
TTTGTTTATTGCAGCAATTT+TGG 0.247478 6_3:+29572758 Msa0947080:intron
CTTTCTACTTGCTGTGATCA+TGG 0.290418 6_3:+29563630 Msa0947080:exon
GTCTCAACCCTCGGAGGTTT+TGG 0.299923 6_3:+29573759 Msa0947080:CDS
TTTGAGACGGAGGGATGATT+TGG 0.338071 6_3:+29575414 Msa0947080:three_prime_UTR
AAACCTTGGCCATGATGTTT+TGG 0.353953 6_3:+29575163 Msa0947080:three_prime_UTR
GGAATAAACTCTTCCAAAAC+TGG 0.355348 6_3:-29572825 None:intergenic
AACTGGGACGAAGTACTTCC+TGG 0.372764 6_3:+29573723 Msa0947080:CDS
TTCGTTGAAACGAAAAGGTC+TGG 0.378571 6_3:+29575196 Msa0947080:three_prime_UTR
CTTAGAACCTCTCTCCTTTG+TGG 0.386335 6_3:+29574671 Msa0947080:three_prime_UTR
AATTCAGATTGGTACTCATT+TGG 0.387213 6_3:+29563413 Msa0947080:five_prime_UTR
ACTGAGATCAATATGAATTT+GGG 0.389375 6_3:-29574339 None:intergenic
CACTCAGATTCTGAAAGAAT+AGG 0.389610 6_3:-29574450 None:intergenic
ATTGTTTGCAGCTGCTGCAC+TGG 0.391528 6_3:-29575301 None:intergenic
TATGCTTAGTGGCTGGTCTT+TGG 0.392106 6_3:+29575050 Msa0947080:three_prime_UTR
TTTCTACTTGCTGTGATCAT+GGG 0.393138 6_3:+29563631 Msa0947080:exon
CCTCCTACCTTTCTACTAGA+AGG 0.393830 6_3:+29573107 Msa0947080:CDS
GTGAATTTGCAGAGTATTGA+AGG 0.399588 6_3:+29563810 Msa0947080:CDS
GTAAATGCTGCAAACGAATA+TGG 0.416823 6_3:+29573831 Msa0947080:CDS
CTTTCATTGGGGTACTTCAC+AGG 0.419164 6_3:+29574390 Msa0947080:CDS
ACTCAGATTCTGAAAGAATA+GGG 0.420667 6_3:-29574449 None:intergenic
TTGAGCTAAGCAAAATAAAC+AGG 0.423378 6_3:+29562840 Msa0947080:five_prime_UTR
AGGTTTCTTTCGTATTGTGC+AGG 0.427728 6_3:+29575119 Msa0947080:three_prime_UTR
TGCTGAGATATGCACTGATT+TGG 0.434101 6_3:+29575696 Msa0947080:three_prime_UTR
CACAAGAAGGTTTGAAAGGA+TGG 0.446981 6_3:-29574648 None:intergenic
TCTTTCAGAATCTGAGTGAA+TGG 0.452610 6_3:+29574455 Msa0947080:exon
GACAGGAATAGAAGGCTGTA+AGG 0.455272 6_3:-29563602 None:intergenic
CGATGGACTAAGCCAGCAAA+TGG 0.463487 6_3:+29575360 Msa0947080:three_prime_UTR
TAACCACATTTCTTCTTCAA+AGG 0.467136 6_3:-29572846 None:intergenic
GAAGTGTTAATTGGATTTCA+GGG 0.471856 6_3:-29574740 None:intergenic
CATATTTCTGCTCCACTCCA+AGG 0.478058 6_3:-29574706 None:intergenic
CTTCTAACCTTCTAGTAGAA+AGG 0.486036 6_3:-29573114 None:intergenic
TCTTATGGAGAAATTCAGAT+TGG 0.499128 6_3:+29563402 Msa0947080:five_prime_UTR
AAGGTAAAGACAGGAATAGA+AGG 0.505628 6_3:-29563610 None:intergenic
GAGACAACTGCAGTAGCTCC+AGG 0.506633 6_3:-29573741 None:intergenic
ATGGCTTCGTTGAAACGAAA+AGG 0.508337 6_3:+29575191 Msa0947080:three_prime_UTR
TGCAGATGAAGTATGCTTAG+TGG 0.508903 6_3:+29575039 Msa0947080:three_prime_UTR
GCAAGTAGAAAGGTAAAGAC+AGG 0.516027 6_3:-29563619 None:intergenic
TTCTACTTGCTGTGATCATG+GGG 0.517355 6_3:+29563632 Msa0947080:exon
ACTAATAAGCATGAAGCAAG+AGG 0.519062 6_3:+29575545 Msa0947080:three_prime_UTR
ATTGAAGGTCTGACAAAGGT+TGG 0.527454 6_3:+29563825 Msa0947080:CDS
GCATGAAGCAAGAGGGTGAT+GGG 0.528389 6_3:+29575553 Msa0947080:three_prime_UTR
AATTCTACTGCTAAATTGGT+CGG 0.542804 6_3:-29575328 None:intergenic
GAACAAATGAGTAAGATTAA+CGG 0.549035 6_3:+29573789 Msa0947080:CDS
TGTAAGGCAGAGGCATAAGT+TGG 0.550513 6_3:-29563586 None:intergenic
TAAGCACAAGAAGGTTTGAA+AGG 0.552078 6_3:-29574652 None:intergenic
TATGCAGGATTTGAAAACCT+TGG 0.552274 6_3:+29575149 Msa0947080:three_prime_UTR
GGTTTCTTTCGTATTGTGCA+GGG 0.552344 6_3:+29575120 Msa0947080:three_prime_UTR
TCGTTGAAACGAAAAGGTCT+GGG 0.554472 6_3:+29575197 Msa0947080:three_prime_UTR
CATGATCACAGCAAGTAGAA+AGG 0.554816 6_3:-29563629 None:intergenic
GAGAGGTTCTAAGCACAAGA+AGG 0.561068 6_3:-29574661 None:intergenic
AATAGAAGGCTGTAAGGCAG+AGG 0.568145 6_3:-29563596 None:intergenic
GCACAATACGAAAGAAACCT+TGG 0.571154 6_3:-29575116 None:intergenic
TGTGGTGACATTGCAAACCT+TGG 0.571436 6_3:+29574689 Msa0947080:three_prime_UTR
ACTGCAGTTGTCTCAACCCT+CGG 0.574479 6_3:+29573750 Msa0947080:CDS
CGTGTGAAGTGCTATCTGAT+TGG 0.576364 6_3:+29575259 Msa0947080:three_prime_UTR
AGCATGAAGCAAGAGGGTGA+TGG 0.592902 6_3:+29575552 Msa0947080:three_prime_UTR
GAAGGTCTGACAAAGGTTGG+AGG 0.595901 6_3:+29563828 Msa0947080:CDS
ATTCCTTTGAAGAAGAAATG+TGG 0.598289 6_3:+29572843 Msa0947080:CDS
GATGAAGTATGCTTAGTGGC+TGG 0.599339 6_3:+29575043 Msa0947080:three_prime_UTR
CCATATGCACCAAAACATCA+TGG 0.601139 6_3:-29575172 None:intergenic
TGTGCAGGGACTGAATATGC+AGG 0.602414 6_3:+29575134 Msa0947080:three_prime_UTR
AAGGTCTGACAAAGGTTGGA+GGG 0.606437 6_3:+29563829 Msa0947080:CDS
GCACCAAAACATCATGGCCA+AGG 0.608013 6_3:-29575166 None:intergenic
AGCAAAATAAACAGGAGCAG+AGG 0.611854 6_3:+29562848 Msa0947080:five_prime_UTR
CTCGCTACCAAAACCTCCGA+GGG 0.612537 6_3:-29573766 None:intergenic
TAACCTTCTAGTAGAAAGGT+AGG 0.613210 6_3:-29573110 None:intergenic
TAACGGCGAGGCTAATGTTG+TGG 0.613394 6_3:+29573806 Msa0947080:CDS
ATATGCTGAATTTCATCATG+AGG 0.622047 6_3:+29575077 Msa0947080:three_prime_UTR
CCTTCTAGTAGAAAGGTAGG+AGG 0.623552 6_3:-29573107 None:intergenic
TAAATATGTATACCTCTACA+TGG 0.627927 6_3:-29562881 None:intergenic
TACTCAAGGAGAGTTCATCA+AGG 0.638404 6_3:+29575458 Msa0947080:three_prime_UTR
CTAATAAGCATGAAGCAAGA+GGG 0.643567 6_3:+29575546 Msa0947080:three_prime_UTR
CCTCGCTACCAAAACCTCCG+AGG 0.646053 6_3:-29573767 None:intergenic
ACTGCTGCATCTTATGCTAG+AGG 0.647560 6_3:+29563437 Msa0947080:five_prime_UTR
TAGCGTGTAAGAAATACTCA+AGG 0.649858 6_3:+29575444 Msa0947080:three_prime_UTR
GGCAGAACACAACCATGTAG+AGG 0.661081 6_3:+29562869 Msa0947080:five_prime_UTR
GAGTATTGAAGGTCTGACAA+AGG 0.665643 6_3:+29563821 Msa0947080:CDS
AATGTCACCACAAAGGAGAG+AGG 0.667419 6_3:-29574678 None:intergenic
TGACATTGCAAACCTTGGAG+TGG 0.676813 6_3:+29574694 Msa0947080:three_prime_UTR
GTAGAATTAGAGTTCGACGA+TGG 0.679540 6_3:+29575343 Msa0947080:three_prime_UTR
GGTTTGCAATGTCACCACAA+AGG 0.687980 6_3:-29574685 None:intergenic
GCAGTTGTCTCAACCCTCGG+AGG 0.692364 6_3:+29573753 Msa0947080:CDS
AATGAGTAAGATTAACGGCG+AGG 0.694649 6_3:+29573794 Msa0947080:CDS
GCTAAAATACAATGTCGACA+TGG 0.704540 6_3:+29575386 Msa0947080:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGTGAATATATAATAATA+AGG - chr6_3:29565562-29565581 None:intergenic 10.0%
!!! TAATATTTTGATATTGTATA+AGG + chr6_3:29568036-29568055 Msa0947080:intron 10.0%
!!! ATTAAACATAAATATTTTCA+AGG - chr6_3:29568533-29568552 None:intergenic 10.0%
!! TGTGAATATATATAATAATA+AGG + chr6_3:29569611-29569630 Msa0947080:intron 10.0%
!! TTAACATAGATATAAATATT+AGG - chr6_3:29572074-29572093 None:intergenic 10.0%
!! ATTGTGAATATATAATAATA+AGG - chr6_3:29565562-29565581 None:intergenic 10.0%
!! GAAAGAAAAAAAAAATCAAA+TGG + chr6_3:29563328-29563347 Msa0947080:intron 15.0%
!!! GATTTGAATTTAATTTGATT+TGG + chr6_3:29563964-29563983 Msa0947080:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG - chr6_3:29570541-29570560 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG - chr6_3:29570540-29570559 None:intergenic 15.0%
!! TTAATATTATAAACAATGAG+CGG + chr6_3:29564727-29564746 Msa0947080:intron 15.0%
!! ATTAGGAGTAATATTTATAT+TGG - chr6_3:29565282-29565301 None:intergenic 15.0%
!! TTCACATAGATATAAATATT+AGG - chr6_3:29565299-29565318 None:intergenic 15.0%
!! ATATTGAGTTAATATTTGAT+TGG - chr6_3:29569490-29569509 None:intergenic 15.0%
!! AATATTAACTCAATATCTAT+TGG + chr6_3:29565685-29565704 Msa0947080:intron 15.0%
!!! AACTTAATATTTTGAATTGA+AGG - chr6_3:29567117-29567136 None:intergenic 15.0%
!! TATTGTATAAGGAATTAATT+TGG + chr6_3:29568047-29568066 Msa0947080:intron 15.0%
!! TAATTTATTTAATTGGAGAA+AGG + chr6_3:29568553-29568572 Msa0947080:intron 15.0%
!!! TAATTAAATCTGCTTTATTT+AGG - chr6_3:29568700-29568719 None:intergenic 15.0%
!! ATATTGAGTTAATATTTGAT+TGG + chr6_3:29569490-29569509 Msa0947080:intron 15.0%
!! TATACATAGGTATAAATATT+AGG + chr6_3:29569873-29569892 Msa0947080:intron 15.0%
!! ATACATAGGTATAAATATTA+GGG + chr6_3:29569874-29569893 Msa0947080:intron 15.0%
!! TTAATATTATAAACAATGAG+CGG - chr6_3:29564727-29564746 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG + chr6_3:29570540-29570559 Msa0947080:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG + chr6_3:29570541-29570560 Msa0947080:intron 15.0%
!! TATAAGTATGACTTATATAA+GGG - chr6_3:29570541-29570560 None:intergenic 15.0%
!! ATATAAGTATGACTTATATA+AGG - chr6_3:29570540-29570559 None:intergenic 15.0%
!! TTAATATTATAAACAATGAG+CGG + chr6_3:29564727-29564746 Msa0947080:intron 15.0%
!! ATTAGGAGTAATATTTATAT+TGG - chr6_3:29565282-29565301 None:intergenic 15.0%
!! TATATAGTGAATTAATTGAT+AGG + chr6_3:29573200-29573219 Msa0947080:intron 15.0%
!!! TTTAACTCAAATTTTCTTAA+TGG - chr6_3:29573602-29573621 None:intergenic 15.0%
!! AGGATAATCATAAAAATTAA+TGG + chr6_3:29575730-29575749 Msa0947080:three_prime_UTR 15.0%
!!! AACTTCATTTTATAAACACA+TGG + chr6_3:29563003-29563022 Msa0947080:intron 20.0%
!!! CATAACATATTTTCTTCATA+AGG - chr6_3:29563201-29563220 None:intergenic 20.0%
!! CTTATGAAGAAAATATGTTA+TGG + chr6_3:29563199-29563218 Msa0947080:intron 20.0%
!!! TACATGTGTTTTATATGATA+AGG + chr6_3:29563296-29563315 Msa0947080:intron 20.0%
!! AATAGCAATTTATAAATCTG+AGG - chr6_3:29563485-29563504 None:intergenic 20.0%
!!! AATTGTTGTTGAATTTCATT+AGG + chr6_3:29563932-29563951 Msa0947080:intron 20.0%
!!! ATTGTTGTTGAATTTCATTA+GGG + chr6_3:29563933-29563952 Msa0947080:intron 20.0%
!! TTTGAACATCAACAAAATTA+AGG - chr6_3:29564172-29564191 None:intergenic 20.0%
!! ATAAGTATGACTTATATAAG+GGG - chr6_3:29570542-29570561 None:intergenic 20.0%
!! ATAAACATTGATCTATACAA+GGG - chr6_3:29570281-29570300 None:intergenic 20.0%
!! TATAAACATTGATCTATACA+AGG - chr6_3:29570280-29570299 None:intergenic 20.0%
!! ATTCGTTATTCAGTATATTT+CGG - chr6_3:29570247-29570266 None:intergenic 20.0%
!! ACTAAGTCAATATAAGATAT+TGG - chr6_3:29570220-29570239 None:intergenic 20.0%
!!! TATCTTATATTGACTTAGTT+CGG + chr6_3:29564953-29564972 Msa0947080:intron 20.0%
!! AATAGTTTCCTTATGTTTAA+CGG + chr6_3:29565439-29565458 Msa0947080:intron 20.0%
!! AAAGTATACATTTGAATCAT+TGG + chr6_3:29565840-29565859 Msa0947080:intron 20.0%
!! GATGTCAAATATAAATGATT+TGG - chr6_3:29565982-29566001 None:intergenic 20.0%
!!! TATGAAATTTGTAAAAGTAC+AGG - chr6_3:29569143-29569162 None:intergenic 20.0%
!!! TGTACTTTTACAAATTTCAT+AGG + chr6_3:29566031-29566050 Msa0947080:intron 20.0%
!!! AATCAATTTTGGTACATATT+AGG + chr6_3:29566233-29566252 Msa0947080:intron 20.0%
!!! CATGTATAGATAAATTGTTT+TGG + chr6_3:29566279-29566298 Msa0947080:intron 20.0%
!! TACAAAATTCATGTATGAAT+TGG - chr6_3:29566450-29566469 None:intergenic 20.0%
!! ATGTATTTGACATATATGTA+GGG - chr6_3:29566511-29566530 None:intergenic 20.0%
!! TATGTATTTGACATATATGT+AGG - chr6_3:29566512-29566531 None:intergenic 20.0%
!! ATATGTCAAATACATATACA+AGG + chr6_3:29566516-29566535 Msa0947080:intron 20.0%
!! TATTGTATAATGCAAATTCT+AGG - chr6_3:29566579-29566598 None:intergenic 20.0%
!! ATTATACAATAATGACAAGT+GGG + chr6_3:29566588-29566607 Msa0947080:intron 20.0%
!! ATTTAACCAATATCCATATA+TGG + chr6_3:29566782-29566801 Msa0947080:intron 20.0%
!!! ATTAGTTTAGATTCTCTTAT+TGG + chr6_3:29566953-29566972 Msa0947080:intron 20.0%
!! TAATAAAAGTGACATGATTA+TGG - chr6_3:29567006-29567025 None:intergenic 20.0%
!! ATAAATTTAGAAGCAATGTT+TGG + chr6_3:29567306-29567325 Msa0947080:intron 20.0%
!! TAAATTTAGAAGCAATGTTT+GGG + chr6_3:29567307-29567326 Msa0947080:intron 20.0%
!!! ATTTGTTTTGAGTAAAATAG+TGG + chr6_3:29567530-29567549 Msa0947080:intron 20.0%
!!! TTTGTTTTGAGTAAAATAGT+GGG + chr6_3:29567531-29567550 Msa0947080:intron 20.0%
!! TATACTGTTAAAAGTTCTTA+TGG + chr6_3:29567654-29567673 Msa0947080:intron 20.0%
!! CAAATGAGTAGAATTAAAAT+TGG + chr6_3:29567829-29567848 Msa0947080:intron 20.0%
!!! TCAGATATGATTTTTGAATT+TGG + chr6_3:29568617-29568636 Msa0947080:intron 20.0%
!! GATGTCAAATATATATGATT+TGG + chr6_3:29569193-29569212 Msa0947080:intron 20.0%
!! AAAGTATACATTTGGATTAT+TGG - chr6_3:29569331-29569350 None:intergenic 20.0%
!!! TCAATATTGATTGGATATTA+GGG - chr6_3:29569549-29569568 None:intergenic 20.0%
!!! ATCAATATTGATTGGATATT+AGG - chr6_3:29569550-29569569 None:intergenic 20.0%
!! TACATAGGTATAAATATTAG+GGG + chr6_3:29569875-29569894 Msa0947080:intron 20.0%
!!! TATCTTATATTGACTTAGTT+CGG - chr6_3:29564953-29564972 None:intergenic 20.0%
!! ACTAAGTCAATATAAGATAT+TGG + chr6_3:29570220-29570239 Msa0947080:intron 20.0%
!! ATTCGTTATTCAGTATATTT+CGG + chr6_3:29570247-29570266 Msa0947080:intron 20.0%
!! TATAAACATTGATCTATACA+AGG + chr6_3:29570280-29570299 Msa0947080:intron 20.0%
!! ATAAACATTGATCTATACAA+GGG + chr6_3:29570281-29570300 Msa0947080:intron 20.0%
!! ATAAGTATGACTTATATAAG+GGG + chr6_3:29570542-29570561 Msa0947080:intron 20.0%
!! ATAAGTATGACTTATATAAG+GGG - chr6_3:29570542-29570561 None:intergenic 20.0%
!! ATAAACATTGATCTATACAA+GGG - chr6_3:29570281-29570300 None:intergenic 20.0%
!! TATAAACATTGATCTATACA+AGG - chr6_3:29570280-29570299 None:intergenic 20.0%
!! ATTCGTTATTCAGTATATTT+CGG - chr6_3:29570247-29570266 None:intergenic 20.0%
!!! TATCTTATATTGACTTAGTT+CGG + chr6_3:29564953-29564972 Msa0947080:intron 20.0%
!! AATATAACTGTAAAATTGCA+TGG - chr6_3:29571759-29571778 None:intergenic 20.0%
!! AATAGTTTCCTTATGTTTAA+CGG + chr6_3:29565439-29565458 Msa0947080:intron 20.0%
!! AATGCAAAACATTAATATCT+AGG - chr6_3:29572486-29572505 None:intergenic 20.0%
!! AATGCATTTATATTGATATG+TGG + chr6_3:29572577-29572596 Msa0947080:intron 20.0%
!!! AAAGGTATCATAAAATCATT+GGG - chr6_3:29572659-29572678 None:intergenic 20.0%
!!! AAAAGGTATCATAAAATCAT+TGG - chr6_3:29572660-29572679 None:intergenic 20.0%
!! TTGAATAAAGTTATCAACTT+TGG + chr6_3:29572698-29572717 Msa0947080:intron 20.0%
!! AACACAACAATAAAATTTCA+AGG - chr6_3:29572939-29572958 None:intergenic 20.0%
!!! TTGTTGTGTTTATGATTTTA+TGG + chr6_3:29572949-29572968 Msa0947080:intron 20.0%
!!! TTATGATTTTATGGTAAGAT+CGG + chr6_3:29572958-29572977 Msa0947080:intron 20.0%
!! GAGAATATAGAAGAAAATTA+AGG + chr6_3:29573029-29573048 Msa0947080:intron 20.0%
!! TACAATTTAGTTAGTTAGTT+AGG - chr6_3:29573303-29573322 None:intergenic 20.0%
!!! AGATGTTTTTTATGTAAACT+GGG + chr6_3:29573707-29573726 Msa0947080:CDS 20.0%
!! ACAAAAATGTAAAGAAACAT+TGG - chr6_3:29574143-29574162 None:intergenic 20.0%
!!! ATGTTTCTTTACATTTTTGT+TGG + chr6_3:29574143-29574162 Msa0947080:intron 20.0%
!! TGTATATATACAAACAAAGA+TGG + chr6_3:29574172-29574191 Msa0947080:intron 20.0%
!! TATATGATGTATATTATGTC+TGG + chr6_3:29574212-29574231 Msa0947080:intron 20.0%
!! ATATGATGTATATTATGTCT+GGG + chr6_3:29574213-29574232 Msa0947080:intron 20.0%
!!! CAGTGATTATTTTTTTACAT+AGG - chr6_3:29574482-29574501 None:intergenic 20.0%
!! TGTTGTACTAACAAAAAAAA+AGG + chr6_3:29574523-29574542 Msa0947080:three_prime_UTR 20.0%
!!! TTTAAAATGGAAGTGTTAAT+TGG - chr6_3:29574752-29574771 None:intergenic 20.0%
!! ATTTAGTTGTTACATAGAAT+AGG - chr6_3:29574969-29574988 None:intergenic 20.0%
! TAAATATGTATACCTCTACA+TGG - chr6_3:29562884-29562903 None:intergenic 25.0%
! ATTCTTGGATTCAAGAAATT+TGG - chr6_3:29563144-29563163 None:intergenic 25.0%
!!! TGTAATTCTTTGAAATACCA+AGG - chr6_3:29563174-29563193 None:intergenic 25.0%
!!! TTATGGAGATTATTTTGTCT+TGG + chr6_3:29563216-29563235 Msa0947080:intron 25.0%
! TGATTTATGATCAGGATATT+TGG + chr6_3:29563523-29563542 Msa0947080:intron 25.0%
! ATATGTGTGCTACAAAAAAA+TGG - chr6_3:29563739-29563758 None:intergenic 25.0%
! ACAAGTGAAACACAAAATTA+GGG - chr6_3:29564003-29564022 None:intergenic 25.0%
! AAAATCATGAAGAATCATGA+AGG + chr6_3:29564040-29564059 Msa0947080:intron 25.0%
! TTTAAAAACTAAACTTTCCG+AGG + chr6_3:29564121-29564140 Msa0947080:intron 25.0%
! AAGTTCTATAAATAGAACTC+TGG - chr6_3:29570665-29570684 None:intergenic 25.0%
! AAATTACTAAACTCGTTGTT+GGG - chr6_3:29570597-29570616 None:intergenic 25.0%
! AAAATTACTAAACTCGTTGT+TGG - chr6_3:29570596-29570615 None:intergenic 25.0%
! CAATAAATATATCGAGACAA+AGG - chr6_3:29564845-29564864 None:intergenic 25.0%
! AATATGACTGTAAAATTGCA+TGG - chr6_3:29570188-29570207 None:intergenic 25.0%
! TAAACAGGAGATATATCTTT+AGG - chr6_3:29570154-29570173 None:intergenic 25.0%
! TTCTCAATAAAGTTTGACTA+CGG + chr6_3:29565406-29565425 Msa0947080:intron 25.0%
! ATAGTTTCCTTATGTTTAAC+GGG + chr6_3:29565440-29565459 Msa0947080:intron 25.0%
! ATACTTAATGTTCCATCAAA+CGG + chr6_3:29565479-29565498 Msa0947080:intron 25.0%
! ATTTATTCCAAATTACGATC+TGG + chr6_3:29566071-29566090 Msa0947080:intron 25.0%
!!! AATGATGTTGACTTTCATAT+AGG - chr6_3:29566109-29566128 None:intergenic 25.0%
! AATATCCTTGGATATCTTAA+AGG - chr6_3:29566184-29566203 None:intergenic 25.0%
!! TCGAACACTATAATCAATTT+TGG + chr6_3:29566222-29566241 Msa0947080:intron 25.0%
! CATTATACAATAATGACAAG+TGG + chr6_3:29566587-29566606 Msa0947080:intron 25.0%
! ATCATTATGCATGTTATGAT+TGG + chr6_3:29567033-29567052 Msa0947080:intron 25.0%
! TATATATGATATATAAGCCG+TGG + chr6_3:29567064-29567083 Msa0947080:intron 25.0%
!!! ATTTCGATATTAGTCTTGAA+GGG - chr6_3:29567163-29567182 None:intergenic 25.0%
! CTATATGATAGATTAGAGTA+AGG + chr6_3:29567335-29567354 Msa0947080:intron 25.0%
! AAAGTTGTATGAGATACAAT+TGG + chr6_3:29567380-29567399 Msa0947080:intron 25.0%
! TACTCAAAACTCAGTTATTT+AGG - chr6_3:29567418-29567437 None:intergenic 25.0%
! ATTACCTTCAACATTTGAAT+CGG - chr6_3:29567512-29567531 None:intergenic 25.0%
!! ATATCGATTATACATATCGA+CGG + chr6_3:29567928-29567947 Msa0947080:intron 25.0%
! TAACAATTGTTTGTTCAGTA+TGG - chr6_3:29568322-29568341 None:intergenic 25.0%
! TGATGTTTGATTGTTGTATT+AGG + chr6_3:29568349-29568368 Msa0947080:intron 25.0%
!! ATACAAGCGTTGTATTATTA+TGG + chr6_3:29568382-29568401 Msa0947080:intron 25.0%
! TGTTTCCAAAACAAATTACA+GGG - chr6_3:29568668-29568687 None:intergenic 25.0%
! TTGTTTCCAAAACAAATTAC+AGG - chr6_3:29568669-29568688 None:intergenic 25.0%
!! CATGTGTAGATAAATTGTTT+TGG - chr6_3:29568896-29568915 None:intergenic 25.0%
! ATTTGTACCAAAATTGATTG+TGG + chr6_3:29568943-29568962 Msa0947080:intron 25.0%
!! TAAGGATTGTTTCTTGAAAA+CGG + chr6_3:29569016-29569035 Msa0947080:intron 25.0%
!!! AATGATGCTGACTTTAATAT+CGG + chr6_3:29569066-29569085 Msa0947080:intron 25.0%
! ATTTATTCCAAATTGCGATT+TGG - chr6_3:29569104-29569123 None:intergenic 25.0%
! TAGAAACAACAACTATTTGA+AGG - chr6_3:29569168-29569187 None:intergenic 25.0%
! TGATACTATTCTAGTAGATA+AGG - chr6_3:29569432-29569451 None:intergenic 25.0%
! CAAACTCAATCAATATTGAT+TGG - chr6_3:29569558-29569577 None:intergenic 25.0%
!! CAATCAATATTGATTGAGTT+TGG + chr6_3:29569556-29569575 Msa0947080:intron 25.0%
! AGAATAGATAGTTCATGTAA+TGG + chr6_3:29569679-29569698 Msa0947080:intron 25.0%
! TTCATATTAAAGCTTGACTA+TGG - chr6_3:29569767-29569786 None:intergenic 25.0%
!! AGTCAAGCTTTAATATGAAT+TGG + chr6_3:29569768-29569787 Msa0947080:intron 25.0%
!! GTCAAGCTTTAATATGAATT+GGG + chr6_3:29569769-29569788 Msa0947080:intron 25.0%
! GAGATATTAAGTCTATACAT+AGG + chr6_3:29569860-29569879 Msa0947080:intron 25.0%
! ATTAGGGGTAATATTTATAC+TGG + chr6_3:29569890-29569909 Msa0947080:intron 25.0%
! TAAACAGGAGATATATCTTT+AGG + chr6_3:29570154-29570173 Msa0947080:intron 25.0%
! AATATGACTGTAAAATTGCA+TGG + chr6_3:29570188-29570207 Msa0947080:intron 25.0%
! AAAATTACTAAACTCGTTGT+TGG + chr6_3:29570596-29570615 Msa0947080:intron 25.0%
! AAATTACTAAACTCGTTGTT+GGG + chr6_3:29570597-29570616 Msa0947080:intron 25.0%
! AAGTTCTATAAATAGAACTC+TGG + chr6_3:29570665-29570684 Msa0947080:intron 25.0%
!! AATTTTCGATTTTCATTCCT+TGG - chr6_3:29570924-29570943 None:intergenic 25.0%
!!! GAATTTTGATTTTCTTTCCT+TGG + chr6_3:29571051-29571070 Msa0947080:intron 25.0%
! AAGTTCTATAAATAGAACTC+TGG - chr6_3:29570665-29570684 None:intergenic 25.0%
! AAATTACTAAACTCGTTGTT+GGG - chr6_3:29570597-29570616 None:intergenic 25.0%
! AAAATTACTAAACTCGTTGT+TGG - chr6_3:29570596-29570615 None:intergenic 25.0%
! CAATAAATATATCGAGACAA+AGG - chr6_3:29564845-29564864 None:intergenic 25.0%
! TACAGTTATATTTCATCAAG+AGG + chr6_3:29571767-29571786 Msa0947080:intron 25.0%
! TAAACAGGAGATATATCTTT+AGG - chr6_3:29570154-29570173 None:intergenic 25.0%
! TTCTCAATAAAGTTTGACTA+CGG + chr6_3:29565406-29565425 Msa0947080:intron 25.0%
! ATAGTTTCCTTATGTTTAAC+GGG + chr6_3:29565440-29565459 Msa0947080:intron 25.0%
! CTATTAGTTAAACACATGTT+TGG - chr6_3:29572446-29572465 None:intergenic 25.0%
!! ATGTTTTGCATTTTTGTGAT+TGG + chr6_3:29572494-29572513 Msa0947080:intron 25.0%
!! TACCTTTTGAATTTTTGATG+TGG + chr6_3:29572672-29572691 Msa0947080:intron 25.0%
!! ACCTTTTGAATTTTTGATGT+GGG + chr6_3:29572673-29572692 Msa0947080:intron 25.0%
!!! TTTGGAGTTTTTGATTCAAT+GGG + chr6_3:29572716-29572735 Msa0947080:intron 25.0%
!! TTTGTTTATTGCAGCAATTT+TGG + chr6_3:29572758-29572777 Msa0947080:intron 25.0%
!! TAAAAATTTTGTGCCAGTTT+TGG + chr6_3:29572812-29572831 Msa0947080:CDS 25.0%
! AAATTTCGTGTGATGTATAA+TGG + chr6_3:29573067-29573086 Msa0947080:intron 25.0%
!! TGACTGAGATTTTGTTAAAA+TGG + chr6_3:29573495-29573514 Msa0947080:intron 25.0%
!! CTCAAATTTTCTTAATGGTT+TGG - chr6_3:29573597-29573616 None:intergenic 25.0%
!!! GAGATGTTTTTTATGTAAAC+TGG + chr6_3:29573706-29573725 Msa0947080:CDS 25.0%
! GAACAAATGAGTAAGATTAA+CGG + chr6_3:29573789-29573808 Msa0947080:CDS 25.0%
! TGCTTATATATGACAGTTAA+TGG - chr6_3:29573960-29573979 None:intergenic 25.0%
! AAGTTGAATGTTTACAGATA+TGG + chr6_3:29574037-29574056 Msa0947080:intron 25.0%
! AAATGTAAAGAAACATTGGA+AGG - chr6_3:29574139-29574158 None:intergenic 25.0%
! ACTGAGATCAATATGAATTT+GGG - chr6_3:29574342-29574361 None:intergenic 25.0%
! AACTGAGATCAATATGAATT+TGG - chr6_3:29574343-29574362 None:intergenic 25.0%
! GAAAATACCTCGATTTAAAA+TGG - chr6_3:29574765-29574784 None:intergenic 25.0%
! AAAAACAGAACACAAGAAAA+AGG - chr6_3:29574831-29574850 None:intergenic 25.0%
!! ATTTTTCATGTCCATATTAC+AGG + chr6_3:29574925-29574944 Msa0947080:intron 25.0%
!! TTTTTCATGTCCATATTACA+GGG + chr6_3:29574926-29574945 Msa0947080:intron 25.0%
!!! GCTTTTTTGAATTTTTACTC+TGG + chr6_3:29575518-29575537 Msa0947080:three_prime_UTR 25.0%
! GTTTTTCTCTACTATGTTGT+AGG + chr6_3:29562805-29562824 Msa0947080:five_prime_UTR 30.0%
TTGAGCTAAGCAAAATAAAC+AGG + chr6_3:29562840-29562859 Msa0947080:five_prime_UTR 30.0%
ACATACTCATCAAATAGTGA+AGG - chr6_3:29562980-29562999 None:intergenic 30.0%
TTTACTAAAGCCGAAATTGT+TGG + chr6_3:29563031-29563050 Msa0947080:intron 30.0%
!! TCAAGAAATTTGGTTTGGTT+TGG - chr6_3:29563134-29563153 None:intergenic 30.0%
TGGATTCAAGAAATTTGGTT+TGG - chr6_3:29563139-29563158 None:intergenic 30.0%
!! TCTTTGAAATACCAAGGAAA+TGG - chr6_3:29563168-29563187 None:intergenic 30.0%
! TGTTACTGATTGCAAATTGA+GGG + chr6_3:29563245-29563264 Msa0947080:intron 30.0%
CATGTACATTTAGAAATCTG+AGG - chr6_3:29563361-29563380 None:intergenic 30.0%
! CATGTGTTTTACAATTTTGC+AGG + chr6_3:29563377-29563396 Msa0947080:intron 30.0%
! ACAATTTTGCAGGTTTCTTA+TGG + chr6_3:29563387-29563406 Msa0947080:intron 30.0%
TCTTATGGAGAAATTCAGAT+TGG + chr6_3:29563402-29563421 Msa0947080:five_prime_UTR 30.0%
AATTCAGATTGGTACTCATT+TGG + chr6_3:29563413-29563432 Msa0947080:five_prime_UTR 30.0%
CCTGATCATAAATCAATAGA+GGG - chr6_3:29563518-29563537 None:intergenic 30.0%
TCCTGATCATAAATCAATAG+AGG - chr6_3:29563519-29563538 None:intergenic 30.0%
!! ACCTAACTGTTGTTTCTTTA+TGG + chr6_3:29563547-29563566 Msa0947080:intron 30.0%
ACCATAAAGAAACAACAGTT+AGG - chr6_3:29563551-29563570 None:intergenic 30.0%
!! CTGTTGTTTCTTTATGGTTT+AGG + chr6_3:29563553-29563572 Msa0947080:intron 30.0%
CACACATATGCATAAAGTAA+TGG + chr6_3:29563750-29563769 Msa0947080:intron 30.0%
!! TGTTTCAGGTTCCATATTTA+TGG + chr6_3:29563863-29563882 Msa0947080:intron 30.0%
GCGATACAAAACCATAAATA+TGG - chr6_3:29563877-29563896 None:intergenic 30.0%
CACAAGTGAAACACAAAATT+AGG - chr6_3:29564004-29564023 None:intergenic 30.0%
! CTAATTTTGTGTTTCACTTG+TGG + chr6_3:29564002-29564021 Msa0947080:intron 30.0%
! AGTTTTTGCCAAAATTACAG+TGG + chr6_3:29564191-29564210 Msa0947080:intron 30.0%
! GAATTTCGATTTTCTTTCCT+TGG + chr6_3:29564276-29564295 Msa0947080:intron 30.0%
ACATGAGTATTATCATGGAA+AGG - chr6_3:29570361-29570380 None:intergenic 30.0%
TGTACACATGAGTATTATCA+TGG - chr6_3:29570356-29570375 None:intergenic 30.0%
CGATATATTTATTGATCCCA+AGG + chr6_3:29564851-29564870 Msa0947080:intron 30.0%
TTCAGTATATTTCGGAATCA+AGG - chr6_3:29570255-29570274 None:intergenic 30.0%
!! TATATTGACTTAGTTCGGTA+TGG + chr6_3:29564958-29564977 Msa0947080:intron 30.0%
TACAGTCATATTTCATCAAG+AGG + chr6_3:29564992-29565011 Msa0947080:intron 30.0%
AGATATATCTCCTGTTTATG+AGG + chr6_3:29565020-29565039 Msa0947080:intron 30.0%
TAAAAGGATAACCATAACGT+TGG - chr6_3:29570065-29570084 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG - chr6_3:29570049-29570068 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG + chr6_3:29565122-29565141 Msa0947080:intron 30.0%
CTTACTATGTAGTATTCTCA+CGG + chr6_3:29565247-29565266 Msa0947080:intron 30.0%
AAGCATAGAGACTATTATGT+GGG - chr6_3:29565372-29565391 None:intergenic 30.0%
AAAGCATAGAGACTATTATG+TGG - chr6_3:29565373-29565392 None:intergenic 30.0%
GTCAAACTTTATTGAGAAGT+GGG - chr6_3:29565404-29565423 None:intergenic 30.0%
AGTCAAACTTTATTGAGAAG+TGG - chr6_3:29565405-29565424 None:intergenic 30.0%
TAGTTTCCTTATGTTTAACG+GGG + chr6_3:29565441-29565460 Msa0947080:intron 30.0%
! ATAGCCAATCTATGTTGATT+GGG - chr6_3:29565620-29565639 None:intergenic 30.0%
AATAGCCAATCTATGTTGAT+TGG - chr6_3:29565621-29565640 None:intergenic 30.0%
! ATCAACATAGATTGGCTATT+AGG + chr6_3:29565621-29565640 Msa0947080:intron 30.0%
! TCAACATAGATTGGCTATTA+GGG + chr6_3:29565622-29565641 Msa0947080:intron 30.0%
AGTATATCCAGATCGTAATT+TGG - chr6_3:29566081-29566100 None:intergenic 30.0%
! TATGGATTGTTTCTTGAACA+TGG - chr6_3:29566159-29566178 None:intergenic 30.0%
TTGGATATCTTAAAGGACTA+TGG - chr6_3:29566177-29566196 None:intergenic 30.0%
!! ATAGTCCTTTAAGATATCCA+AGG + chr6_3:29566176-29566195 Msa0947080:intron 30.0%
ATATCCAAGGATATTCTTGA+AGG + chr6_3:29566189-29566208 Msa0947080:intron 30.0%
AATACCTTCAAGAATATCCT+TGG - chr6_3:29566196-29566215 None:intergenic 30.0%
TTATCTATACATGTGAGACA+TGG - chr6_3:29566272-29566291 None:intergenic 30.0%
AAAGAAATCTTGTGCACATA+AGG - chr6_3:29566362-29566381 None:intergenic 30.0%
! ATAATGCAAATTCTAGGAGA+TGG - chr6_3:29566573-29566592 None:intergenic 30.0%
AAGATGTGATTGATTGTAGA+AGG - chr6_3:29566682-29566701 None:intergenic 30.0%
CACAAACCATATATGGATAT+TGG - chr6_3:29566791-29566810 None:intergenic 30.0%
!! CATTTCGATATTAGTCTTGA+AGG - chr6_3:29567164-29567183 None:intergenic 30.0%
AGACTAATATCGAAATGTGT+AGG + chr6_3:29567167-29567186 Msa0947080:intron 30.0%
CTTTCTATACTAGTAAGTTG+CGG + chr6_3:29567210-29567229 Msa0947080:intron 30.0%
AGAATAACACTTGGGTAAAT+TGG - chr6_3:29567245-29567264 None:intergenic 30.0%
!! TTACCCAAGTGTTATTCTTT+TGG + chr6_3:29567247-29567266 Msa0947080:intron 30.0%
!! TACCCAAGTGTTATTCTTTT+GGG + chr6_3:29567248-29567267 Msa0947080:intron 30.0%
AACCCAAAAGAATAACACTT+GGG - chr6_3:29567253-29567272 None:intergenic 30.0%
AAACCCAAAAGAATAACACT+TGG - chr6_3:29567254-29567273 None:intergenic 30.0%
TTGTATGAGATACAATTGGA+AGG + chr6_3:29567384-29567403 Msa0947080:intron 30.0%
CAAAACTCAGTTATTTAGGT+AGG - chr6_3:29567414-29567433 None:intergenic 30.0%
ACTTAAAGCAAGGTGAAATA+TGG + chr6_3:29567450-29567469 Msa0947080:intron 30.0%
!! TCATTGGAAGATTTTCTAGT+GGG - chr6_3:29567483-29567502 None:intergenic 30.0%
TTTGAATCGGAAAATCTCAT+TGG - chr6_3:29567499-29567518 None:intergenic 30.0%
! TTTTCCGATTCAAATGTTGA+AGG + chr6_3:29567505-29567524 Msa0947080:intron 30.0%
TCAGAAAAGAGTTTCTGAAT+TGG + chr6_3:29567689-29567708 Msa0947080:intron 30.0%
TATAGACATAGAAAGTTGCT+AGG - chr6_3:29567776-29567795 None:intergenic 30.0%
! TATCGATTATACATATCGAC+GGG + chr6_3:29567929-29567948 Msa0947080:intron 30.0%
GATGATATCATTCGTTCAAT+AGG + chr6_3:29568208-29568227 Msa0947080:intron 30.0%
AATACAACGCTTGTATAGTT+AGG - chr6_3:29568378-29568397 None:intergenic 30.0%
!!! TTTAGCCCTGTAATTTGTTT+TGG + chr6_3:29568660-29568679 Msa0947080:intron 30.0%
ATAAAAATCTTGTGCACACA+AGG + chr6_3:29568813-29568832 Msa0947080:intron 30.0%
AACACTTTCAAGAATATCCA+TGG + chr6_3:29568979-29568998 Msa0947080:intron 30.0%
AATATCCATGGATGTCTTAA+AGG + chr6_3:29568991-29569010 Msa0947080:intron 30.0%
!! GTTTCTTGAAAACGGATTAA+AGG + chr6_3:29569024-29569043 Msa0947080:intron 30.0%
AGTATATCCAAATCGCAATT+TGG + chr6_3:29569094-29569113 Msa0947080:intron 30.0%
! TTTGGAATAAATGCTATGCT+TGG + chr6_3:29569112-29569131 Msa0947080:intron 30.0%
! GAAGTGTCAAAGTATACATT+TGG - chr6_3:29565832-29565851 None:intergenic 30.0%
! ACACTTCAATTTCTTTTCGA+TGG + chr6_3:29569352-29569371 Msa0947080:intron 30.0%
TAAGGAACTATTTCCTATGT+TGG - chr6_3:29569414-29569433 None:intergenic 30.0%
CATACTATGTAGTATTCTCA+CGG - chr6_3:29569925-29569944 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG - chr6_3:29565122-29565141 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG + chr6_3:29570049-29570068 Msa0947080:intron 30.0%
TAAAAGGATAACCATAACGT+TGG + chr6_3:29570065-29570084 Msa0947080:intron 30.0%
AGATATATCTCCTGTTTATG+AGG - chr6_3:29565020-29565039 None:intergenic 30.0%
TACAGTCATATTTCATCAAG+AGG - chr6_3:29564992-29565011 None:intergenic 30.0%
TTCAGTATATTTCGGAATCA+AGG + chr6_3:29570255-29570274 Msa0947080:intron 30.0%
CAATAAAGATATCGAGACAA+AGG + chr6_3:29570327-29570346 Msa0947080:intron 30.0%
TGTACACATGAGTATTATCA+TGG + chr6_3:29570356-29570375 Msa0947080:intron 30.0%
ACATGAGTATTATCATGGAA+AGG + chr6_3:29570361-29570380 Msa0947080:intron 30.0%
CGAAAAATCGAATAGAAGAA+TGG - chr6_3:29570963-29570982 None:intergenic 30.0%
ACATGAGTATTATCATGGAA+AGG - chr6_3:29570361-29570380 None:intergenic 30.0%
TGTACACATGAGTATTATCA+TGG - chr6_3:29570356-29570375 None:intergenic 30.0%
CGATATATTTATTGATCCCA+AGG + chr6_3:29564851-29564870 Msa0947080:intron 30.0%
AGATATATCTCCTGTTTATG+AGG + chr6_3:29565020-29565039 Msa0947080:intron 30.0%
TAAAAGGATAACCATAACGT+TGG - chr6_3:29570065-29570084 None:intergenic 30.0%
ATTCTAACGTTGTCTGTAAA+AGG - chr6_3:29570049-29570068 None:intergenic 30.0%
! TTTTACAGACAACGTTAGAA+TGG + chr6_3:29565122-29565141 Msa0947080:intron 30.0%
CTTACTATGTAGTATTCTCA+CGG + chr6_3:29565247-29565266 Msa0947080:intron 30.0%
AAGCATAGAGACTATTATGT+GGG - chr6_3:29565372-29565391 None:intergenic 30.0%
AAAGCATAGAGACTATTATG+TGG - chr6_3:29565373-29565392 None:intergenic 30.0%
GTCAAACTTTATTGAGAAGT+GGG - chr6_3:29565404-29565423 None:intergenic 30.0%
AGTCAAACTTTATTGAGAAG+TGG - chr6_3:29565405-29565424 None:intergenic 30.0%
TAGTTTCCTTATGTTTAACG+GGG + chr6_3:29565441-29565460 Msa0947080:intron 30.0%
! AGAATAGTTAGTCTGTTTGA+TGG - chr6_3:29572269-29572288 None:intergenic 30.0%
TCAAACAGACTAACTATTCT+AGG + chr6_3:29572269-29572288 Msa0947080:intron 30.0%
CAAACAGACTAACTATTCTA+GGG + chr6_3:29572270-29572289 Msa0947080:intron 30.0%
! ATAGCCAATCTATGTTGATT+GGG - chr6_3:29565620-29565639 None:intergenic 30.0%
AATAGCCAATCTATGTTGAT+TGG - chr6_3:29565621-29565640 None:intergenic 30.0%
! ATCAACATAGATTGGCTATT+AGG + chr6_3:29565621-29565640 Msa0947080:intron 30.0%
! TCAACATAGATTGGCTATTA+GGG + chr6_3:29565622-29565641 Msa0947080:intron 30.0%
CATGTGTTTAACTAATAGTG+TGG + chr6_3:29572448-29572467 Msa0947080:intron 30.0%
TTAATTATGTTGTCTTCCTC+AGG - chr6_3:29572558-29572577 None:intergenic 30.0%
! TAAAGTATCTTCTCCAAGAA+AGG - chr6_3:29572603-29572622 None:intergenic 30.0%
TTTCTTGGAGAAGATACTTT+AGG + chr6_3:29572602-29572621 Msa0947080:intron 30.0%
TTCTTGGAGAAGATACTTTA+GGG + chr6_3:29572603-29572622 Msa0947080:intron 30.0%
ACCCACATCAAAAATTCAAA+AGG - chr6_3:29572677-29572696 None:intergenic 30.0%
!!! CTTTGGAGTTTTTGATTCAA+TGG + chr6_3:29572715-29572734 Msa0947080:intron 30.0%
!! TTGGAGTTTTTGATTCAATG+GGG + chr6_3:29572717-29572736 Msa0947080:intron 30.0%
! ATTCCTTTGAAGAAGAAATG+TGG + chr6_3:29572843-29572862 Msa0947080:CDS 30.0%
TAACCACATTTCTTCTTCAA+AGG - chr6_3:29572849-29572868 None:intergenic 30.0%
AGAAATGTGGTTAATGTATG+AGG + chr6_3:29572856-29572875 Msa0947080:intron 30.0%
CATATAACATGAATTGCAAG+AGG - chr6_3:29572886-29572905 None:intergenic 30.0%
!! AGATCGGTTGATTTGAAAAT+AGG + chr6_3:29572974-29572993 Msa0947080:intron 30.0%
TGATATGTAGATTGTAGTCT+TGG + chr6_3:29573341-29573360 Msa0947080:intron 30.0%
GATATGTAGATTGTAGTCTT+GGG + chr6_3:29573342-29573361 Msa0947080:intron 30.0%
TAGAAGTCATAAGCTTAAAC+AGG + chr6_3:29573398-29573417 Msa0947080:intron 30.0%
ACACAAAAACAAAAGAAGTG+TGG - chr6_3:29573472-29573491 None:intergenic 30.0%
! GAGATTTTGTTAAAATGGTC+AGG + chr6_3:29573500-29573519 Msa0947080:intron 30.0%
!! GAATTTGAGTATCGTTTTTC+TGG + chr6_3:29573652-29573671 Msa0947080:intron 30.0%
AATGTTTACAGATATGGAGA+TGG + chr6_3:29574043-29574062 Msa0947080:intron 30.0%
! TTCTTTACATTTTTGTTGGC+TGG + chr6_3:29574147-29574166 Msa0947080:intron 30.0%
!! ACCATCGTTTTTACTTTCAT+TGG + chr6_3:29574377-29574396 Msa0947080:CDS 30.0%
!! CCATCGTTTTTACTTTCATT+GGG + chr6_3:29574378-29574397 Msa0947080:CDS 30.0%
!! CATCGTTTTTACTTTCATTG+GGG + chr6_3:29574379-29574398 Msa0947080:CDS 30.0%
AAAAAGAAAAGCAGAATCTG+AGG + chr6_3:29574413-29574432 Msa0947080:CDS 30.0%
! TTCTGAAAGAATAGGGAATT+TGG - chr6_3:29574445-29574464 None:intergenic 30.0%
! ACTCAGATTCTGAAAGAATA+GGG - chr6_3:29574452-29574471 None:intergenic 30.0%
! GTTGTCAAGTATTCTCTTTT+AGG + chr6_3:29574623-29574642 Msa0947080:three_prime_UTR 30.0%
! GAAGTGTTAATTGGATTTCA+GGG - chr6_3:29574743-29574762 None:intergenic 30.0%
! AACACTTCCATTTTAAATCG+AGG + chr6_3:29574755-29574774 Msa0947080:three_prime_UTR 30.0%
CTGCAACAGTTTATAAAGTA+TGG + chr6_3:29574990-29575009 Msa0947080:intron 30.0%
GTATGGTTAATTTATCACTC+TGG + chr6_3:29575007-29575026 Msa0947080:intron 30.0%
ATATGCTGAATTTCATCATG+AGG + chr6_3:29575077-29575096 Msa0947080:three_prime_UTR 30.0%
AATTCTACTGCTAAATTGGT+CGG - chr6_3:29575331-29575350 None:intergenic 30.0%
CTCTAATTCTACTGCTAAAT+TGG - chr6_3:29575335-29575354 None:intergenic 30.0%
GCAGTTATCACCAACAATTT+CGG - chr6_3:29563044-29563063 None:intergenic 35.0%
ATCCAAGAATTCCATTTCCT+TGG + chr6_3:29563154-29563173 Msa0947080:intron 35.0%
TACCAAGGAAATGGAATTCT+TGG - chr6_3:29563159-29563178 None:intergenic 35.0%
!! GAGATTATTTTGTCTTGGCT+TGG + chr6_3:29563221-29563240 Msa0947080:intron 35.0%
! CTGTTACTGATTGCAAATTG+AGG + chr6_3:29563244-29563263 Msa0947080:intron 35.0%
!! CCCTCTATTGATTTATGATC+AGG + chr6_3:29563515-29563534 Msa0947080:intron 35.0%
AAGGTAAAGACAGGAATAGA+AGG - chr6_3:29563613-29563632 None:intergenic 35.0%
!! TTTCTACTTGCTGTGATCAT+GGG + chr6_3:29563631-29563650 Msa0947080:exon 35.0%
!! GTGAATTTGCAGAGTATTGA+AGG + chr6_3:29563810-29563829 Msa0947080:CDS 35.0%
! CAATTTCTGTCATTTGTGTG+TGG - chr6_3:29563917-29563936 None:intergenic 35.0%
TCGAAAGATATCATACACAG+CGG + chr6_3:29564227-29564246 Msa0947080:intron 35.0%
GTCAAATTCGTAATGATCCA+AGG - chr6_3:29564296-29564315 None:intergenic 35.0%
ACATGAATCAGTGATACGAT+TGG + chr6_3:29564314-29564333 Msa0947080:intron 35.0%
ATTCAGAACAGAAACTATCG+AGG - chr6_3:29564342-29564361 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG + chr6_3:29564538-29564557 Msa0947080:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG + chr6_3:29564539-29564558 Msa0947080:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG - chr6_3:29570396-29570415 None:intergenic 35.0%
TATATCTCCTGTTTATGAGG+AGG + chr6_3:29565023-29565042 Msa0947080:intron 35.0%
ATATCTCCTGTTTATGAGGA+GGG + chr6_3:29565024-29565043 Msa0947080:intron 35.0%
TACTTGATGAATCATGCTGA+GGG - chr6_3:29570096-29570115 None:intergenic 35.0%
! TAACCATAACGTTGGTTGAT+GGG - chr6_3:29570073-29570092 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG - chr6_3:29570072-29570091 None:intergenic 35.0%
AGAATAGTTAGTCCGTTTGA+TGG - chr6_3:29565494-29565513 None:intergenic 35.0%
!! TCAAACGGACTAACTATTCT+AGG + chr6_3:29565494-29565513 Msa0947080:intron 35.0%
!! CAAACGGACTAACTATTCTA+GGG + chr6_3:29565495-29565514 Msa0947080:intron 35.0%
! CAATCTATGTTGATTGGGTT+TGG - chr6_3:29565615-29565634 None:intergenic 35.0%
CAAACCCAATCAACATAGAT+TGG + chr6_3:29565613-29565632 Msa0947080:intron 35.0%
AGATACTCTACTAGCAGATA+AGG + chr6_3:29565739-29565758 Msa0947080:intron 35.0%
TAAGGAACTCTTTCCTATGT+TGG + chr6_3:29565757-29565776 Msa0947080:intron 35.0%
TTTCGATAGAAGATCGAAAG+TGG - chr6_3:29565805-29565824 None:intergenic 35.0%
! AATCTCGTCTGAGGTAAAAT+TGG - chr6_3:29565901-29565920 None:intergenic 35.0%
TTTACCTCAGACGAGATTAA+TGG + chr6_3:29565903-29565922 Msa0947080:intron 35.0%
AATATGTGTTTCTTGCGTTG+TGG - chr6_3:29565932-29565951 None:intergenic 35.0%
! TATTAGTTTGGTGGAGTATG+TGG - chr6_3:29568855-29568874 None:intergenic 35.0%
!! GAGCATTGATATTAGTTTGG+TGG - chr6_3:29568846-29568865 None:intergenic 35.0%
!! TGGGAGCATTGATATTAGTT+TGG - chr6_3:29568843-29568862 None:intergenic 35.0%
! TATACCTTTCTAGCATCCTT+TGG + chr6_3:29566475-29566494 Msa0947080:intron 35.0%
TAATCCAAAGGATGCTAGAA+AGG - chr6_3:29566482-29566501 None:intergenic 35.0%
TTTCTTGTAGAAAGCTGACA+TGG - chr6_3:29566725-29566744 None:intergenic 35.0%
TCTCATGAGTCATACTCATT+TGG + chr6_3:29566756-29566775 Msa0947080:intron 35.0%
CCATGTACACAAACCATATA+TGG - chr6_3:29566798-29566817 None:intergenic 35.0%
! CCATATATGGTTTGTGTACA+TGG + chr6_3:29566795-29566814 Msa0947080:intron 35.0%
GGATTCTTTATAAGATCCCA+TGG + chr6_3:29566816-29566835 Msa0947080:intron 35.0%
TTAGCCATTTCTCAAAGTTC+AGG + chr6_3:29566842-29566861 Msa0947080:intron 35.0%
!!! CTTGAAGGGTGTTAAACTTT+TGG - chr6_3:29567149-29567168 None:intergenic 35.0%
! CTCATTGGAAGATTTTCTAG+TGG - chr6_3:29567484-29567503 None:intergenic 35.0%
! CGTATCATGTTTTATGTGCA+TGG + chr6_3:29567855-29567874 Msa0947080:intron 35.0%
TGTCAATACTTCACCAGAAA+CGG - chr6_3:29567909-29567928 None:intergenic 35.0%
GTTTGTTTAGCATGAACAAC+CGG - chr6_3:29568507-29568526 None:intergenic 35.0%
!! TGGGAGCATTGATATTAGTT+TGG + chr6_3:29568843-29568862 Msa0947080:intron 35.0%
!! GAGCATTGATATTAGTTTGG+TGG + chr6_3:29568846-29568865 Msa0947080:intron 35.0%
! TATTAGTTTGGTGGAGTATG+TGG + chr6_3:29568855-29568874 Msa0947080:intron 35.0%
TTATCTACACATGTGAGACA+TGG + chr6_3:29568903-29568922 Msa0947080:intron 35.0%
! TCGAACACCACAATCAATTT+TGG - chr6_3:29568953-29568972 None:intergenic 35.0%
!! TTAGTCCTTTAAGACATCCA+TGG - chr6_3:29568999-29569018 None:intergenic 35.0%
ATGGATGTCTTAAAGGACTA+AGG + chr6_3:29568998-29569017 Msa0947080:intron 35.0%
AAACCAATTTCACCTCAGAT+GGG - chr6_3:29569278-29569297 None:intergenic 35.0%
TAAACCAATTTCACCTCAGA+TGG - chr6_3:29569279-29569298 None:intergenic 35.0%
GAACTATTTCCTATGTTGGT+AGG - chr6_3:29569410-29569429 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG + chr6_3:29570072-29570091 Msa0947080:intron 35.0%
! TAACCATAACGTTGGTTGAT+GGG + chr6_3:29570073-29570092 Msa0947080:intron 35.0%
TACTTGATGAATCATGCTGA+GGG + chr6_3:29570096-29570115 Msa0947080:intron 35.0%
ATATCTCCTGTTTATGAGGA+GGG - chr6_3:29565024-29565043 None:intergenic 35.0%
TATATCTCCTGTTTATGAGG+AGG - chr6_3:29565023-29565042 None:intergenic 35.0%
!! TATATTGACTTAGTTCGGCA+TGG - chr6_3:29571733-29571752 None:intergenic 35.0%
GGTGACAATATCTATGTCTT+GGG + chr6_3:29570302-29570321 Msa0947080:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG + chr6_3:29570396-29570415 Msa0947080:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG - chr6_3:29564539-29564558 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG - chr6_3:29564538-29564557 None:intergenic 35.0%
CTGAATTTCGTAATGATCCA+AGG + chr6_3:29570904-29570923 Msa0947080:intron 35.0%
! ATCTTTCGATTTTCCTTCAG+TGG - chr6_3:29564216-29564235 None:intergenic 35.0%
TCGAAAGATATCATACACAG+CGG + chr6_3:29564227-29564246 Msa0947080:intron 35.0%
GTCAAATTCGTAATGATCCA+AGG - chr6_3:29564296-29564315 None:intergenic 35.0%
ATTCAGAACAGAAACTATCG+AGG - chr6_3:29564342-29564361 None:intergenic 35.0%
TGCAAGTCATAAGTCACTAT+TGG + chr6_3:29564538-29564557 Msa0947080:intron 35.0%
GCAAGTCATAAGTCACTATT+GGG + chr6_3:29564539-29564558 Msa0947080:intron 35.0%
! ACTTGACATTCTTGTCACTT+GGG - chr6_3:29570396-29570415 None:intergenic 35.0%
TTCAGTATATTTCGGAATCG+AGG - chr6_3:29571692-29571711 None:intergenic 35.0%
!! TATATTGACTTAGTTCGGCA+TGG + chr6_3:29571733-29571752 Msa0947080:intron 35.0%
TATATCTCCTGTTTATGAGG+AGG + chr6_3:29565023-29565042 Msa0947080:intron 35.0%
ATATCTCCTGTTTATGAGGA+GGG + chr6_3:29565024-29565043 Msa0947080:intron 35.0%
TACTTGATGAATCATGCTGA+GGG - chr6_3:29570096-29570115 None:intergenic 35.0%
! TAACCATAACGTTGGTTGAT+GGG - chr6_3:29570073-29570092 None:intergenic 35.0%
! ATAACCATAACGTTGGTTGA+TGG - chr6_3:29570072-29570091 None:intergenic 35.0%
! CAATCTATGTTGATTGGGTT+TGG - chr6_3:29565615-29565634 None:intergenic 35.0%
CAAACCCAATCAACATAGAT+TGG + chr6_3:29565613-29565632 Msa0947080:intron 35.0%
!! TGGTATATCTGTTTTTCCTG+AGG + chr6_3:29572539-29572558 Msa0947080:intron 35.0%
TATTGATATGTGGCCTTTCT+TGG + chr6_3:29572587-29572606 Msa0947080:intron 35.0%
!!! TGCAGCAATTTTGGTTTTGA+AGG + chr6_3:29572767-29572786 Msa0947080:intron 35.0%
!!! AGCAATTTTGGTTTTGAAGG+AGG + chr6_3:29572770-29572789 Msa0947080:intron 35.0%
!!! TTTGGTTTTGAAGGAGGAAT+TGG + chr6_3:29572776-29572795 Msa0947080:CDS 35.0%
GGAATAAACTCTTCCAAAAC+TGG - chr6_3:29572828-29572847 None:intergenic 35.0%
TAACCTTCTAGTAGAAAGGT+AGG - chr6_3:29573113-29573132 None:intergenic 35.0%
CTTCTAACCTTCTAGTAGAA+AGG - chr6_3:29573117-29573136 None:intergenic 35.0%
GTTCTACTTACTCAGATTCA+TGG + chr6_3:29573525-29573544 Msa0947080:intron 35.0%
AGAGGGAGACAAAAAATCTA+TGG + chr6_3:29573570-29573589 Msa0947080:intron 35.0%
GAGGGAGACAAAAAATCTAT+GGG + chr6_3:29573571-29573590 Msa0947080:intron 35.0%
AAAAACATCTCCTGCACATT+AGG - chr6_3:29573697-29573716 None:intergenic 35.0%
GTAAATGCTGCAAACGAATA+TGG + chr6_3:29573831-29573850 Msa0947080:CDS 35.0%
CAAAATAACGCTCAATGAGA+TGG - chr6_3:29573861-29573880 None:intergenic 35.0%
!! GTTGTTATGTGCTGTTTACA+AGG + chr6_3:29573917-29573936 Msa0947080:intron 35.0%
CTAACTGCTAAGGCTATATT+TGG - chr6_3:29574114-29574133 None:intergenic 35.0%
CAAAGATGGTTTGATGCTTA+TGG + chr6_3:29574186-29574205 Msa0947080:intron 35.0%
CCCAATGAAAGTAAAAACGA+TGG - chr6_3:29574381-29574400 None:intergenic 35.0%
! CACTCAGATTCTGAAAGAAT+AGG - chr6_3:29574453-29574472 None:intergenic 35.0%
TCTTTCAGAATCTGAGTGAA+TGG + chr6_3:29574455-29574474 Msa0947080:exon 35.0%
TAAGCACAAGAAGGTTTGAA+AGG - chr6_3:29574655-29574674 None:intergenic 35.0%
!! GGAAGTGTTAATTGGATTTC+AGG - chr6_3:29574744-29574763 None:intergenic 35.0%
TATGCAGGATTTGAAAACCT+TGG + chr6_3:29575149-29575168 Msa0947080:three_prime_UTR 35.0%
!!! TATTTTAGCTCTCCATTTGC+TGG - chr6_3:29575375-29575394 None:intergenic 35.0%
GCTAAAATACAATGTCGACA+TGG + chr6_3:29575386-29575405 Msa0947080:three_prime_UTR 35.0%
TAGCGTGTAAGAAATACTCA+AGG + chr6_3:29575444-29575463 Msa0947080:three_prime_UTR 35.0%
!!! TTTTAGAGTTCCAGAAGCAA+TGG + chr6_3:29575496-29575515 Msa0947080:three_prime_UTR 35.0%
TTCAAAAAAGCCATTGCTTC+TGG - chr6_3:29575509-29575528 None:intergenic 35.0%
ACTAATAAGCATGAAGCAAG+AGG + chr6_3:29575545-29575564 Msa0947080:three_prime_UTR 35.0%
CTAATAAGCATGAAGCAAGA+GGG + chr6_3:29575546-29575565 Msa0947080:three_prime_UTR 35.0%
!! CTGATTTGGTCTTCACTATT+AGG + chr6_3:29575710-29575729 Msa0947080:three_prime_UTR 35.0%
AGCAAAATAAACAGGAGCAG+AGG + chr6_3:29562848-29562867 Msa0947080:five_prime_UTR 40.0%
ATGACAATGCTGCACGAATT+TGG - chr6_3:29563084-29563103 None:intergenic 40.0%
GCAAGTAGAAAGGTAAAGAC+AGG - chr6_3:29563622-29563641 None:intergenic 40.0%
CATGATCACAGCAAGTAGAA+AGG - chr6_3:29563632-29563651 None:intergenic 40.0%
!! CTTTCTACTTGCTGTGATCA+TGG + chr6_3:29563630-29563649 Msa0947080:exon 40.0%
!! TTCTACTTGCTGTGATCATG+GGG + chr6_3:29563632-29563651 Msa0947080:exon 40.0%
!! GAGTATTGAAGGTCTGACAA+AGG + chr6_3:29563821-29563840 Msa0947080:CDS 40.0%
ATTGAAGGTCTGACAAAGGT+TGG + chr6_3:29563825-29563844 Msa0947080:CDS 40.0%
GGGACTGTTATATGTGTTTC+AGG + chr6_3:29563849-29563868 Msa0947080:CDS 40.0%
TGTGTGTGGTGTATTAACGA+TGG - chr6_3:29563903-29563922 None:intergenic 40.0%
GCTGTCTGAATTGATGTCTT+TGG + chr6_3:29564065-29564084 Msa0947080:intron 40.0%
GTCTGAATTGATGTCTTTGG+TGG + chr6_3:29564068-29564087 Msa0947080:intron 40.0%
! CGATTCTAAAAAAGCAGCCT+CGG - chr6_3:29564141-29564160 None:intergenic 40.0%
!! CTTCAGTGCCACTGTAATTT+TGG - chr6_3:29564202-29564221 None:intergenic 40.0%
! CAAAATTACAGTGGCACTGA+AGG + chr6_3:29564200-29564219 Msa0947080:intron 40.0%
TCTCTGCACTTCCAATTCAT+TGG - chr6_3:29570730-29570749 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG + chr6_3:29564446-29564465 Msa0947080:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG + chr6_3:29564447-29564466 Msa0947080:intron 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG - chr6_3:29570680-29570699 None:intergenic 40.0%
TTCTTTGTGTGTGACCCTAT+AGG + chr6_3:29564668-29564687 Msa0947080:intron 40.0%
CAACGTGACTAGAACCTATA+GGG - chr6_3:29570487-29570506 None:intergenic 40.0%
CACTTGACATTCTTGTCACT+TGG - chr6_3:29570395-29570414 None:intergenic 40.0%
GGTGACAATATCTATGCCTT+GGG - chr6_3:29564870-29564889 None:intergenic 40.0%
ATTTGTCCCTCCTCATAAAC+AGG - chr6_3:29570139-29570158 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG - chr6_3:29570095-29570114 None:intergenic 40.0%
ACTATGTAGTATTCTCACGG+CGG + chr6_3:29565250-29565269 Msa0947080:intron 40.0%
TGATCACATCTCACAGATCA+TGG - chr6_3:29565341-29565360 None:intergenic 40.0%
!!! GATTGGCTTTTAGTGCTAGT+GGG - chr6_3:29569507-29569526 None:intergenic 40.0%
!!! TGATTGGCTTTTAGTGCTAG+TGG - chr6_3:29569506-29569525 None:intergenic 40.0%
TGTTAGCATCAAGCACACTA+TGG + chr6_3:29565713-29565732 Msa0947080:intron 40.0%
GAACTCTTTCCTATGTTGGT+AGG + chr6_3:29565761-29565780 Msa0947080:intron 40.0%
GAAGTAAGACCTACCAACAT+AGG - chr6_3:29565773-29565792 None:intergenic 40.0%
GATTCCATTAATCTCGTCTG+AGG - chr6_3:29565910-29565929 None:intergenic 40.0%
GTGCACATAAGGAGATTAGT+GGG - chr6_3:29566351-29566370 None:intergenic 40.0%
TGTGCACATAAGGAGATTAG+TGG - chr6_3:29566352-29566371 None:intergenic 40.0%
GTAGGGTTTCGTTAATCCAA+AGG - chr6_3:29566494-29566513 None:intergenic 40.0%
TTGTAGAAAGCTGACATGGA+TGG - chr6_3:29566721-29566740 None:intergenic 40.0%
! ATGGCCTGAACTTTGAGAAA+TGG - chr6_3:29566849-29566868 None:intergenic 40.0%
ACTTCCTAGAAGGTCGTAAA+TGG - chr6_3:29566868-29566887 None:intergenic 40.0%
! ACGACCTTCTAGGAAGTAAT+AGG + chr6_3:29566871-29566890 Msa0947080:intron 40.0%
! CGACCTTCTAGGAAGTAATA+GGG + chr6_3:29566872-29566891 Msa0947080:intron 40.0%
CTTGAGAGATTCATAGCGTT+AGG + chr6_3:29566976-29566995 Msa0947080:intron 40.0%
AGAGATTCATAGCGTTAGGA+TGG + chr6_3:29566980-29566999 Msa0947080:intron 40.0%
ATGATATATAAGCCGTGGTG+AGG + chr6_3:29567069-29567088 Msa0947080:intron 40.0%
TATACTAGTAAGTTGCGGTG+CGG + chr6_3:29567215-29567234 Msa0947080:intron 40.0%
! TTCACCTTGCTTTAAGTCAG+CGG - chr6_3:29567447-29567466 None:intergenic 40.0%
! ACAACGCTTATCAGAAGCAT+TGG + chr6_3:29567804-29567823 Msa0947080:intron 40.0%
!! CAACGCTTATCAGAAGCATT+GGG + chr6_3:29567805-29567824 Msa0947080:intron 40.0%
GATGTTTCAGAAACCGTTTC+TGG + chr6_3:29567893-29567912 Msa0947080:intron 40.0%
CTTTGATGCTTCACCAGAAT+CGG - chr6_3:29568289-29568308 None:intergenic 40.0%
GTTTGTTCAGTATGGACAAC+CGG - chr6_3:29568314-29568333 None:intergenic 40.0%
TGAGCTTCAATATCCGAATC+TGG + chr6_3:29568466-29568485 Msa0947080:intron 40.0%
CTATGATGCTTCACCAGATT+CGG - chr6_3:29568482-29568501 None:intergenic 40.0%
TTTCGATGGAAGATCGAAAG+TGG + chr6_3:29569366-29569385 Msa0947080:intron 40.0%
GAAGTGTAACCTACCAACAT+AGG + chr6_3:29569398-29569417 Msa0947080:intron 40.0%
ACTAGAATAGTATCATGCCC+AGG + chr6_3:29569437-29569456 Msa0947080:intron 40.0%
CTAGAATAGTATCATGCCCA+GGG + chr6_3:29569438-29569457 Msa0947080:intron 40.0%
!!! TGATTGGCTTTTAGTGCTAG+TGG + chr6_3:29569506-29569525 Msa0947080:intron 40.0%
!!! GATTGGCTTTTAGTGCTAGT+GGG + chr6_3:29569507-29569526 Msa0947080:intron 40.0%
TATCAATGACCCATGAGATG+CGG - chr6_3:29569838-29569857 None:intergenic 40.0%
CTATGTAGTATTCTCACGGT+GGG - chr6_3:29569921-29569940 None:intergenic 40.0%
ACTATGTAGTATTCTCACGG+TGG - chr6_3:29565250-29565269 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG + chr6_3:29570095-29570114 Msa0947080:intron 40.0%
ATTTGTCCCTCCTCATAAAC+AGG + chr6_3:29570139-29570158 Msa0947080:intron 40.0%
GGGTGACAATATCTATGTCT+TGG + chr6_3:29570301-29570320 Msa0947080:intron 40.0%
CACTTGACATTCTTGTCACT+TGG + chr6_3:29570395-29570414 Msa0947080:intron 40.0%
CAACGTGACTAGAACCTATA+GGG + chr6_3:29570487-29570506 Msa0947080:intron 40.0%
TTCTTTGTGTGTGACCCTAT+AGG - chr6_3:29564668-29564687 None:intergenic 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG + chr6_3:29570680-29570699 Msa0947080:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG - chr6_3:29564447-29564466 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG - chr6_3:29564446-29564465 None:intergenic 40.0%
TCTCTGCACTTCCAATTCAT+TGG + chr6_3:29570730-29570749 Msa0947080:intron 40.0%
TCGATTGTTACCTTGAACTG+TGG - chr6_3:29570869-29570888 None:intergenic 40.0%
TCTCTGCACTTCCAATTCAT+TGG - chr6_3:29570730-29570749 None:intergenic 40.0%
! ATTGGAAGTGCAGAGAAGAA+AGG + chr6_3:29564446-29564465 Msa0947080:intron 40.0%
! TTGGAAGTGCAGAGAAGAAA+GGG + chr6_3:29564447-29564466 Msa0947080:intron 40.0%
!! AACTCTGGTGCTGAAGTTTT+TGG - chr6_3:29570680-29570699 None:intergenic 40.0%
TTCTTTGTGTGTGACCCTAT+AGG + chr6_3:29564668-29564687 Msa0947080:intron 40.0%
CAACGTGACTAGAACCTATA+GGG - chr6_3:29570487-29570506 None:intergenic 40.0%
CACTTGACATTCTTGTCACT+TGG - chr6_3:29570395-29570414 None:intergenic 40.0%
GGTGACAATATCTATGCCTT+GGG - chr6_3:29564870-29564889 None:intergenic 40.0%
ATTTGTCCCTCCTCATAAAC+AGG - chr6_3:29570139-29570158 None:intergenic 40.0%
GTACTTGATGAATCATGCTG+AGG - chr6_3:29570095-29570114 None:intergenic 40.0%
AAGCACTTGAGTTCACATCT+AGG + chr6_3:29571925-29571944 Msa0947080:intron 40.0%
AGCACTTGAGTTCACATCTA+GGG + chr6_3:29571926-29571945 Msa0947080:intron 40.0%
TTCACATCTAGGGATCATAG+TGG + chr6_3:29571936-29571955 Msa0947080:intron 40.0%
ACTATGTAGTATTCTCACGG+CGG + chr6_3:29565250-29565269 Msa0947080:intron 40.0%
TGATCACATCTCACAGATCA+TGG - chr6_3:29565341-29565360 None:intergenic 40.0%
ATACCAGAATCACCACTCAT+CGG - chr6_3:29572525-29572544 None:intergenic 40.0%
!! TTTTGATTCAATGGGGCTGA+TGG + chr6_3:29572724-29572743 Msa0947080:intron 40.0%
TTTGATTCAATGGGGCTGAT+GGG + chr6_3:29572725-29572744 Msa0947080:intron 40.0%
! ATGTAGATTGTAGTCTTGGG+AGG + chr6_3:29573345-29573364 Msa0947080:intron 40.0%
CTCAGATTCATGGATAGTGT+TGG + chr6_3:29573535-29573554 Msa0947080:intron 40.0%
!! GGATAGTGTTGGTACTACAT+AGG + chr6_3:29573546-29573565 Msa0947080:intron 40.0%
AATGAGTAAGATTAACGGCG+AGG + chr6_3:29573794-29573813 Msa0947080:CDS 40.0%
AGCACATAACAACGCTCTAA+AGG - chr6_3:29573910-29573929 None:intergenic 40.0%
TGAATTTGGGAATTCCTGCA+AGG - chr6_3:29574329-29574348 None:intergenic 40.0%
CACAAGAAGGTTTGAAAGGA+TGG - chr6_3:29574651-29574670 None:intergenic 40.0%
TTCATGTCCATATTACAGGG+CGG + chr6_3:29574929-29574948 Msa0947080:intron 40.0%
ATTTGAACCGCCCTGTAATA+TGG - chr6_3:29574939-29574958 None:intergenic 40.0%
TGCAGATGAAGTATGCTTAG+TGG + chr6_3:29575039-29575058 Msa0947080:three_prime_UTR 40.0%
!!! GCGCTGTTTTTTTCTTTCCA+AGG + chr6_3:29575099-29575118 Msa0947080:three_prime_UTR 40.0%
GCACAATACGAAAGAAACCT+TGG - chr6_3:29575119-29575138 None:intergenic 40.0%
AGGTTTCTTTCGTATTGTGC+AGG + chr6_3:29575119-29575138 Msa0947080:three_prime_UTR 40.0%
GGTTTCTTTCGTATTGTGCA+GGG + chr6_3:29575120-29575139 Msa0947080:three_prime_UTR 40.0%
! AAACCTTGGCCATGATGTTT+TGG + chr6_3:29575163-29575182 Msa0947080:three_prime_UTR 40.0%
CCATATGCACCAAAACATCA+TGG - chr6_3:29575175-29575194 None:intergenic 40.0%
!!! CCATGATGTTTTGGTGCATA+TGG + chr6_3:29575172-29575191 Msa0947080:three_prime_UTR 40.0%
ATGGCTTCGTTGAAACGAAA+AGG + chr6_3:29575191-29575210 Msa0947080:three_prime_UTR 40.0%
TTCGTTGAAACGAAAAGGTC+TGG + chr6_3:29575196-29575215 Msa0947080:three_prime_UTR 40.0%
TCGTTGAAACGAAAAGGTCT+GGG + chr6_3:29575197-29575216 Msa0947080:three_prime_UTR 40.0%
GTAGAATTAGAGTTCGACGA+TGG + chr6_3:29575343-29575362 Msa0947080:three_prime_UTR 40.0%
TACTCAAGGAGAGTTCATCA+AGG + chr6_3:29575458-29575477 Msa0947080:three_prime_UTR 40.0%
! CTCTAAAAAACAGCAGGTCT+TGG - chr6_3:29575484-29575503 None:intergenic 40.0%
! CTGGAACTCTAAAAAACAGC+AGG - chr6_3:29575490-29575509 None:intergenic 40.0%
GTGACTCGATTGTGTGTTTA+AGG + chr6_3:29575672-29575691 Msa0947080:three_prime_UTR 40.0%
!! TGCTGAGATATGCACTGATT+TGG + chr6_3:29575696-29575715 Msa0947080:three_prime_UTR 40.0%
TGCAAATTGAGGGCTCTACA+TGG + chr6_3:29563255-29563274 Msa0947080:intron 45.0%
ACTGCTGCATCTTATGCTAG+AGG + chr6_3:29563437-29563456 Msa0947080:five_prime_UTR 45.0%
! TGTAAGGCAGAGGCATAAGT+TGG - chr6_3:29563589-29563608 None:intergenic 45.0%
AATAGAAGGCTGTAAGGCAG+AGG - chr6_3:29563599-29563618 None:intergenic 45.0%
GACAGGAATAGAAGGCTGTA+AGG - chr6_3:29563605-29563624 None:intergenic 45.0%
AAGGTCTGACAAAGGTTGGA+GGG + chr6_3:29563829-29563848 Msa0947080:CDS 45.0%
TGTTCGTGTGGACTTACTAG+AGG - chr6_3:29564394-29564413 None:intergenic 45.0%
AACAGTGCTCCTCCAAAACT+CGG + chr6_3:29564410-29564429 Msa0947080:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG + chr6_3:29564448-29564467 Msa0947080:intron 45.0%
CCAACGTGACTAGAACCTAT+AGG - chr6_3:29570486-29570505 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG + chr6_3:29564683-29564702 Msa0947080:intron 45.0%
GGGTGACAATATCTATGCCT+TGG - chr6_3:29564871-29564890 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG + chr6_3:29565093-29565112 Msa0947080:intron 45.0%
AAGCACTTGAGTCCACATCT+AGG + chr6_3:29565150-29565169 Msa0947080:intron 45.0%
AGCACTTGAGTCCACATCTA+GGG + chr6_3:29565151-29565170 Msa0947080:intron 45.0%
TCCACATCTAGGGATCATAG+TGG + chr6_3:29565161-29565180 Msa0947080:intron 45.0%
ACCACTATGATCCCTAGATG+TGG - chr6_3:29570007-29570026 None:intergenic 45.0%
CTAGGGATCATAGTGGTTTC+AGG + chr6_3:29565168-29565187 Msa0947080:intron 45.0%
CTATGTAGTATTCTCACGGC+GGG + chr6_3:29565251-29565270 Msa0947080:intron 45.0%
GTGAGACCCCGTTAAACATA+AGG - chr6_3:29565450-29565469 None:intergenic 45.0%
TAGTGCTAGTGGGAGATTGT+TGG - chr6_3:29569517-29569536 None:intergenic 45.0%
GAGAAATGGCTAAACGCCAT+GGG - chr6_3:29566835-29566854 None:intergenic 45.0%
TGAGAAATGGCTAAACGCCA+TGG - chr6_3:29566836-29566855 None:intergenic 45.0%
GAGCCCTATTACTTCCTAGA+AGG - chr6_3:29566878-29566897 None:intergenic 45.0%
GTAATAGGGCTCATGACGTT+AGG + chr6_3:29566886-29566905 Msa0947080:intron 45.0%
TCATGACGTTAGGATAGTCC+TGG + chr6_3:29566896-29566915 Msa0947080:intron 45.0%
AGTTTGATCTCACCTCACCA+CGG - chr6_3:29567084-29567103 None:intergenic 45.0%
! AGTATAGAAAGTGCACCTCG+CGG - chr6_3:29567201-29567220 None:intergenic 45.0%
! TCACCTTGCTTTAAGTCAGC+GGG - chr6_3:29567446-29567465 None:intergenic 45.0%
CATATCGACGGGAACATGAT+TGG + chr6_3:29567940-29567959 Msa0947080:intron 45.0%
!! TGAGCTTCGAATACCGATTC+TGG + chr6_3:29568273-29568292 Msa0947080:intron 45.0%
! CTGGTGAAGCATCAAAGATC+CGG + chr6_3:29568292-29568311 Msa0947080:intron 45.0%
! CTGGTGAAGCATCATAGATC+CGG + chr6_3:29568485-29568504 Msa0947080:intron 45.0%
TGTGCACACAAGGAGAATAG+TGG + chr6_3:29568823-29568842 Msa0947080:intron 45.0%
GTGCACACAAGGAGAATAGT+GGG + chr6_3:29568824-29568843 Msa0947080:intron 45.0%
GATTCCATTGATCCCATCTG+AGG + chr6_3:29569263-29569282 Msa0947080:intron 45.0%
TTCACCTCAGATGGGATCAA+TGG - chr6_3:29569270-29569289 None:intergenic 45.0%
! GATCCCATCTGAGGTGAAAT+TGG + chr6_3:29569272-29569291 Msa0947080:intron 45.0%
TAGTGCTAGTGGGAGATTGT+TGG + chr6_3:29569517-29569536 Msa0947080:intron 45.0%
CTAGGGATCATAGTGGTTTC+AGG - chr6_3:29565168-29565187 None:intergenic 45.0%
ACCACTATGATCCCTAGATG+TGG + chr6_3:29570007-29570026 Msa0947080:intron 45.0%
TCCACATCTAGGGATCATAG+TGG - chr6_3:29565161-29565180 None:intergenic 45.0%
AGCACTTGAGTCCACATCTA+GGG - chr6_3:29565151-29565170 None:intergenic 45.0%
AAGCACTTGAGTCCACATCT+AGG - chr6_3:29565150-29565169 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG - chr6_3:29565093-29565112 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG - chr6_3:29564683-29564702 None:intergenic 45.0%
CCAACGTGACTAGAACCTAT+AGG + chr6_3:29570486-29570505 Msa0947080:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG - chr6_3:29564448-29564467 None:intergenic 45.0%
!! CTTGGTGCTAGCCAATGAAT+TGG - chr6_3:29570744-29570763 None:intergenic 45.0%
!! CATTGGCTAGCACCAAGTTT+TGG + chr6_3:29570747-29570766 Msa0947080:intron 45.0%
AACAGTGCTCCTCCAAAACT+TGG - chr6_3:29564410-29564429 None:intergenic 45.0%
! TTTGTTGCTTGCTGCTTGCT+TGG + chr6_3:29570802-29570821 Msa0947080:intron 45.0%
CAGTTTCCAGTTCCAGCTTT+CGG + chr6_3:29570840-29570859 Msa0947080:intron 45.0%
CTTTCGGATTCCACAGTTCA+AGG + chr6_3:29570856-29570875 Msa0947080:intron 45.0%
GAAGAATGGAGTAGAAGCAG+CGG - chr6_3:29570949-29570968 None:intergenic 45.0%
TTTCGCTCTGATACCACTGA+AGG + chr6_3:29570978-29570997 Msa0947080:intron 45.0%
TGTTCGTGTGGACTTACTAG+AGG - chr6_3:29564394-29564413 None:intergenic 45.0%
AACAGTGCTCCTCCAAAACT+CGG + chr6_3:29564410-29564429 Msa0947080:intron 45.0%
! TGGAAGTGCAGAGAAGAAAG+GGG + chr6_3:29564448-29564467 Msa0947080:intron 45.0%
CCAACGTGACTAGAACCTAT+AGG - chr6_3:29570486-29570505 None:intergenic 45.0%
! CCTATAGGTTCTAGTCACGT+TGG + chr6_3:29564683-29564702 Msa0947080:intron 45.0%
GGGTGACAATATCTATGCCT+TGG - chr6_3:29564871-29564890 None:intergenic 45.0%
GTACCCATCAACCAACGTTA+TGG + chr6_3:29565093-29565112 Msa0947080:intron 45.0%
CTAGGGATCATAGTGGTTTC+AGG + chr6_3:29565168-29565187 Msa0947080:intron 45.0%
CTATGTAGTATTCTCACGGC+GGG + chr6_3:29565251-29565270 Msa0947080:intron 45.0%
GTGAGACCCCGTTAAACATA+AGG - chr6_3:29565450-29565469 None:intergenic 45.0%
CTATTAGGGCTTACTCCAAC+AGG + chr6_3:29565636-29565655 Msa0947080:intron 45.0%
CCTTCTAGTAGAAAGGTAGG+AGG - chr6_3:29573110-29573129 None:intergenic 45.0%
CCTCCTACCTTTCTACTAGA+AGG + chr6_3:29573107-29573126 Msa0947080:CDS 45.0%
!! ATGCAAGGCAGAAGTATCCA+AGG + chr6_3:29573372-29573391 Msa0947080:intron 45.0%
!! TGCAAGGCAGAAGTATCCAA+GGG + chr6_3:29573373-29573392 Msa0947080:intron 45.0%
GCTTATGACTTCTATGCCCT+TGG - chr6_3:29573392-29573411 None:intergenic 45.0%
AAGTGTGGAAGAGATGAGAC+GGG - chr6_3:29573457-29573476 None:intergenic 45.0%
GAAGTGTGGAAGAGATGAGA+CGG - chr6_3:29573458-29573477 None:intergenic 45.0%
TGTTGGTACTACATAGGCAG+AGG + chr6_3:29573552-29573571 Msa0947080:intron 45.0%
GTTGGTACTACATAGGCAGA+GGG + chr6_3:29573553-29573572 Msa0947080:intron 45.0%
CAGTGTTATGCCTAATGTGC+AGG + chr6_3:29573684-29573703 Msa0947080:intron 45.0%
!! TTGGAAGGTGCTAACTGCTA+AGG - chr6_3:29574124-29574143 None:intergenic 45.0%
TGAGTCGTGAATAGCACATC+TGG - chr6_3:29574290-29574309 None:intergenic 45.0%
! CAGCTGTTCTTTTACCTTGC+AGG + chr6_3:29574312-29574331 Msa0947080:intron 45.0%
! CTTTCATTGGGGTACTTCAC+AGG + chr6_3:29574390-29574409 Msa0947080:CDS 45.0%
!! GAGAGGTTCTAAGCACAAGA+AGG - chr6_3:29574664-29574683 None:intergenic 45.0%
CTTAGAACCTCTCTCCTTTG+TGG + chr6_3:29574671-29574690 Msa0947080:three_prime_UTR 45.0%
AATGTCACCACAAAGGAGAG+AGG - chr6_3:29574681-29574700 None:intergenic 45.0%
GGTTTGCAATGTCACCACAA+AGG - chr6_3:29574688-29574707 None:intergenic 45.0%
TGTGGTGACATTGCAAACCT+TGG + chr6_3:29574689-29574708 Msa0947080:three_prime_UTR 45.0%
TGACATTGCAAACCTTGGAG+TGG + chr6_3:29574694-29574713 Msa0947080:three_prime_UTR 45.0%
! CATATTTCTGCTCCACTCCA+AGG - chr6_3:29574709-29574728 None:intergenic 45.0%
GATGAAGTATGCTTAGTGGC+TGG + chr6_3:29575043-29575062 Msa0947080:three_prime_UTR 45.0%
!! TATGCTTAGTGGCTGGTCTT+TGG + chr6_3:29575050-29575069 Msa0947080:three_prime_UTR 45.0%
! CGTGTGAAGTGCTATCTGAT+TGG + chr6_3:29575259-29575278 Msa0947080:three_prime_UTR 45.0%
TCATCCCTCCGTCTCAAAAA+CGG - chr6_3:29575412-29575431 None:intergenic 45.0%
! TTTGAGACGGAGGGATGATT+TGG + chr6_3:29575414-29575433 Msa0947080:three_prime_UTR 45.0%
!!! TTAATATTCTATTTTATTAA+CGG - chr6_3:29568082-29568101 None:intergenic 5.0%
!! GTTTAATTAATTTATTTAAT+TGG + chr6_3:29568546-29568565 Msa0947080:intron 5.0%
GGCAGAACACAACCATGTAG+AGG + chr6_3:29562869-29562888 Msa0947080:five_prime_UTR 50.0%
!! GCTAGAGGTACTAGCAGCAA+TGG + chr6_3:29563452-29563471 Msa0947080:intron 50.0%
GAAGGTCTGACAAAGGTTGG+AGG + chr6_3:29563828-29563847 Msa0947080:CDS 50.0%
!! CATTGGCTAGCACCGAGTTT+TGG - chr6_3:29564425-29564444 None:intergenic 50.0%
!! CTCGGTGCTAGCCAATGAAT+TGG + chr6_3:29564428-29564447 Msa0947080:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG + chr6_3:29565040-29565059 Msa0947080:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG - chr6_3:29570116-29570135 None:intergenic 50.0%
AGGGACATGAGTGTCCTAGA+TGG - chr6_3:29570115-29570134 None:intergenic 50.0%
CAGGCCATTTACGACCTTCT+AGG + chr6_3:29566861-29566880 Msa0947080:intron 50.0%
TGACGTTAGGATAGTCCTGG+AGG + chr6_3:29566899-29566918 Msa0947080:intron 50.0%
ATAGTCCTGGAGGTCAAGCT+TGG + chr6_3:29566909-29566928 Msa0947080:intron 50.0%
AGGTCAAGCTTGGAGAAGCA+AGG + chr6_3:29566919-29566938 Msa0947080:intron 50.0%
GGAGAAGCAAGGTCGTTTCT+AGG + chr6_3:29566930-29566949 Msa0947080:intron 50.0%
! ACCTTGCTTTAAGTCAGCGG+GGG - chr6_3:29567444-29567463 None:intergenic 50.0%
! CACCTTGCTTTAAGTCAGCG+GGG - chr6_3:29567445-29567464 None:intergenic 50.0%
ACCATGTGTCTCTTGCGTTG+CGG + chr6_3:29569241-29569260 Msa0947080:intron 50.0%
GTTAGCATCAAGCACACCCT+GGG - chr6_3:29569457-29569476 None:intergenic 50.0%
TGTTAGCATCAAGCACACCC+TGG - chr6_3:29569458-29569477 None:intergenic 50.0%
AGACTGATGACCGCATCTCA+TGG + chr6_3:29569825-29569844 Msa0947080:intron 50.0%
GACTGATGACCGCATCTCAT+GGG + chr6_3:29569826-29569845 Msa0947080:intron 50.0%
AGGGACATGAGTGTCCTAGA+TGG + chr6_3:29570115-29570134 Msa0947080:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG + chr6_3:29570116-29570135 Msa0947080:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG - chr6_3:29565040-29565059 None:intergenic 50.0%
!! TGGCTAGCACCAAGTTTTGG+AGG + chr6_3:29570750-29570769 Msa0947080:intron 50.0%
!! TGTTCGTGTGGACTTGCTAG+AGG + chr6_3:29570778-29570797 Msa0947080:intron 50.0%
CGAAAGCTGGAACTGGAAAC+TGG - chr6_3:29570842-29570861 None:intergenic 50.0%
TGGAATCCGAAAGCTGGAAC+TGG - chr6_3:29570849-29570868 None:intergenic 50.0%
GAACTGTGGAATCCGAAAGC+TGG - chr6_3:29570855-29570874 None:intergenic 50.0%
!! CATTGGCTAGCACCGAGTTT+TGG - chr6_3:29564425-29564444 None:intergenic 50.0%
!! CTCGGTGCTAGCCAATGAAT+TGG + chr6_3:29564428-29564447 Msa0947080:intron 50.0%
AGGAGGGACAAATCCCATCT+AGG + chr6_3:29565040-29565059 Msa0947080:intron 50.0%
GGGACATGAGTGTCCTAGAT+GGG - chr6_3:29570116-29570135 None:intergenic 50.0%
AGGGACATGAGTGTCCTAGA+TGG - chr6_3:29570115-29570134 None:intergenic 50.0%
GTTTGGATTCACGTGCCTGT+TGG - chr6_3:29572429-29572448 None:intergenic 50.0%
TGATTGGACTGTCCGATGAG+TGG + chr6_3:29572510-29572529 Msa0947080:intron 50.0%
TGTCCGATGAGTGGTGATTC+TGG + chr6_3:29572519-29572538 Msa0947080:intron 50.0%
GTCTTGGGAGGCAATATGCA+AGG + chr6_3:29573357-29573376 Msa0947080:intron 50.0%
AGTGTGGAAGAGATGAGACG+GGG - chr6_3:29573456-29573475 None:intergenic 50.0%
! AACTGGGACGAAGTACTTCC+TGG + chr6_3:29573723-29573742 Msa0947080:CDS 50.0%
ACTGCAGTTGTCTCAACCCT+CGG + chr6_3:29573750-29573769 Msa0947080:CDS 50.0%
TAACGGCGAGGCTAATGTTG+TGG + chr6_3:29573806-29573825 Msa0947080:CDS 50.0%
TGTGCAGGGACTGAATATGC+AGG + chr6_3:29575134-29575153 Msa0947080:three_prime_UTR 50.0%
GCACCAAAACATCATGGCCA+AGG - chr6_3:29575169-29575188 None:intergenic 50.0%
ATTGTTTGCAGCTGCTGCAC+TGG - chr6_3:29575304-29575323 None:intergenic 50.0%
!! CGATGGACTAAGCCAGCAAA+TGG + chr6_3:29575360-29575379 Msa0947080:three_prime_UTR 50.0%
!!! CGACATGGCCGTTTTTGAGA+CGG + chr6_3:29575401-29575420 Msa0947080:three_prime_UTR 50.0%
!!! ATGGCCGTTTTTGAGACGGA+GGG + chr6_3:29575405-29575424 Msa0947080:three_prime_UTR 50.0%
AGCATGAAGCAAGAGGGTGA+TGG + chr6_3:29575552-29575571 Msa0947080:three_prime_UTR 50.0%
GCATGAAGCAAGAGGGTGAT+GGG + chr6_3:29575553-29575572 Msa0947080:three_prime_UTR 50.0%
!! TTGGAGGAGCACTGTTCGTG+TGG - chr6_3:29570766-29570785 None:intergenic 55.0%
!! TGGCTAGCACCGAGTTTTGG+AGG - chr6_3:29564422-29564441 None:intergenic 55.0%
CTTCTCCAAGCTTGACCTCC+AGG - chr6_3:29566917-29566936 None:intergenic 55.0%
! ATAGAAAGTGCACCTCGCGG+AGG - chr6_3:29567198-29567217 None:intergenic 55.0%
TCCGCAACGCAAGAGACACA+TGG - chr6_3:29569245-29569264 None:intergenic 55.0%
!! TTGGAGGAGCACTGTTCGTG+TGG + chr6_3:29570766-29570785 Msa0947080:intron 55.0%
!! TTGGAGGAGCACTGTTCGTG+TGG - chr6_3:29570766-29570785 None:intergenic 55.0%
!! TGGCTAGCACCGAGTTTTGG+AGG - chr6_3:29564422-29564441 None:intergenic 55.0%
! AGAGATGAGACGGGGGTATG+TGG - chr6_3:29573448-29573467 None:intergenic 55.0%
GTGTGGAAGAGATGAGACGG+GGG - chr6_3:29573455-29573474 None:intergenic 55.0%
GAGACAACTGCAGTAGCTCC+AGG - chr6_3:29573744-29573763 None:intergenic 55.0%
! GTCTCAACCCTCGGAGGTTT+TGG + chr6_3:29573759-29573778 Msa0947080:CDS 55.0%
CTCGCTACCAAAACCTCCGA+GGG - chr6_3:29573769-29573788 None:intergenic 55.0%
!!! CATGGCCGTTTTTGAGACGG+AGG + chr6_3:29575404-29575423 Msa0947080:three_prime_UTR 55.0%
!! GCCCCCGCTGACTTAAAGCA+AGG + chr6_3:29567440-29567459 Msa0947080:intron 60.0%
GCAGTTGTCTCAACCCTCGG+AGG + chr6_3:29573753-29573772 Msa0947080:CDS 60.0%
CCTCGCTACCAAAACCTCCG+AGG - chr6_3:29573770-29573789 None:intergenic 60.0%
!!! CCTCGGAGGTTTTGGTAGCG+AGG + chr6_3:29573767-29573786 Msa0947080:CDS 60.0%
GTGTAGGTTTCGCCTCCGCG+AGG + chr6_3:29567183-29567202 Msa0947080:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 29562801 29575753 29562801 ID=Msa0947080;Name=Msa0947080
chr6_3 mRNA 29562801 29575753 29562801 ID=Msa0947080-mRNA-1;Parent=Msa0947080;Name=Msa0947080-mRNA-1;_AED=0.18;_eAED=0.18;_QI=224|0.62|0.77|0.88|0.62|0.66|9|1021|163
chr6_3 exon 29562801 29562890 29562801 ID=Msa0947080-mRNA-1:exon:7789;Parent=Msa0947080-mRNA-1
chr6_3 exon 29563399 29563458 29563399 ID=Msa0947080-mRNA-1:exon:7790;Parent=Msa0947080-mRNA-1
chr6_3 exon 29563575 29563653 29563575 ID=Msa0947080-mRNA-1:exon:7791;Parent=Msa0947080-mRNA-1
chr6_3 exon 29563800 29563870 29563800 ID=Msa0947080-mRNA-1:exon:7792;Parent=Msa0947080-mRNA-1
chr6_3 exon 29572772 29572864 29572772 ID=Msa0947080-mRNA-1:exon:7793;Parent=Msa0947080-mRNA-1
chr6_3 exon 29573093 29573128 29573093 ID=Msa0947080-mRNA-1:exon:7794;Parent=Msa0947080-mRNA-1
chr6_3 exon 29573706 29573852 29573706 ID=Msa0947080-mRNA-1:exon:7795;Parent=Msa0947080-mRNA-1
chr6_3 exon 29574334 29574776 29574334 ID=Msa0947080-mRNA-1:exon:7796;Parent=Msa0947080-mRNA-1
chr6_3 exon 29575036 29575753 29575036 ID=Msa0947080-mRNA-1:exon:7797;Parent=Msa0947080-mRNA-1
chr6_3 five_prime_UTR 29562801 29562890 29562801 ID=Msa0947080-mRNA-1:five_prime_utr;Parent=Msa0947080-mRNA-1
chr6_3 five_prime_UTR 29563399 29563458 29563399 ID=Msa0947080-mRNA-1:five_prime_utr;Parent=Msa0947080-mRNA-1
chr6_3 five_prime_UTR 29563575 29563648 29563575 ID=Msa0947080-mRNA-1:five_prime_utr;Parent=Msa0947080-mRNA-1
chr6_3 CDS 29563649 29563653 29563649 ID=Msa0947080-mRNA-1:cds;Parent=Msa0947080-mRNA-1
chr6_3 CDS 29563800 29563870 29563800 ID=Msa0947080-mRNA-1:cds;Parent=Msa0947080-mRNA-1
chr6_3 CDS 29572772 29572864 29572772 ID=Msa0947080-mRNA-1:cds;Parent=Msa0947080-mRNA-1
chr6_3 CDS 29573093 29573128 29573093 ID=Msa0947080-mRNA-1:cds;Parent=Msa0947080-mRNA-1
chr6_3 CDS 29573706 29573852 29573706 ID=Msa0947080-mRNA-1:cds;Parent=Msa0947080-mRNA-1
chr6_3 CDS 29574334 29574473 29574334 ID=Msa0947080-mRNA-1:cds;Parent=Msa0947080-mRNA-1
chr6_3 three_prime_UTR 29574474 29574776 29574474 ID=Msa0947080-mRNA-1:three_prime_utr;Parent=Msa0947080-mRNA-1
chr6_3 three_prime_UTR 29575036 29575753 29575036 ID=Msa0947080-mRNA-1:three_prime_utr;Parent=Msa0947080-mRNA-1
Gene Sequence

>Msa0947080

ATGGGTGTAGAAAGAGTGAATTTGCAGAGTATTGAAGGTCTGACAAAGGTTGGAGGGACTGTTATATGTGTTTCAGCAATTTTGGTTTTGAAGGAGGAATTGGAAAAATGCAGAAGTAAAAATTTTGTGCCAGTTTTGGAAGAGTTTATTCCTTTGAAGAAGAAATGTGTTTCGTCGTCGTCTCCTCCTACCTTTCTACTAGAAGGAGATGTTTTTTATGTAAACTGGGACGAAGTACTTCCTGGAGCTACTGCAGTTGTCTCAACCCTCGGAGGTTTTGGTAGCGAGGAACAAATGAGTAAGATTAACGGCGAGGCTAATGTTGTGGCTGTAAATGCTGCAAACGAATATGGAATTCCCAAATTCATATTGATCTCAGTTCATGACTATAACTTACCATCGTTTTTACTTTCATTGGGGTACTTCACAGGAAAAAGAAAAGCAGAATCTGAGGTTCTATCCAAATTCCCTATTCTTTCAGAATCTGAGTGA
Protein sequence

>Msa0947080

MGVERVNLQSIEGLTKVGGTVICVSAILVLKEELEKCRSKNFVPVLEEFIPLKKKCVSSSSPPTFLLEGDVFYVNWDEVLPGATAVVSTLGGFGSEEQMSKINGEANVVAVNAANEYGIPKFILISVHDYNLPSFLLSLGYFTGKRKAESEVLSKFPILSESE*