AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0951330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0951330 MtrunA17_Chr6g0467501 79.012 567 86 1 1 534 1 567 0.0 885
Msa0951330 MtrunA17_Chr6g0458601 49.604 379 135 8 176 530 62 408 2.09e-99 313
Msa0951330 MtrunA17_Chr1g0193401 48.303 383 142 9 178 533 179 532 2.96e-93 300
Msa0951330 MtrunA17_Chr4g0020731 75.287 174 43 0 533 706 135 308 1.16e-81 274
Msa0951330 MtrunA17_Chr3g0085761 72.989 174 47 0 533 706 310 483 2.75e-79 269
Msa0951330 MtrunA17_Chr6g0465671 42.159 389 170 9 171 539 1 354 1.45e-78 256
Msa0951330 MtrunA17_Chr6g0466481 41.645 389 172 9 171 539 1 354 2.08e-77 253
Msa0951330 MtrunA17_Chr1g0181601 40.253 395 175 7 171 537 1 362 5.75e-75 247
Msa0951330 MtrunA17_Chr4g0023831 72.414 174 48 0 533 706 1023 1196 7.08e-73 258
Msa0951330 MtrunA17_Chr5g0423901 41.791 402 173 11 172 546 3 370 8.74e-73 241
Msa0951330 MtrunA17_Chr6g0458501 43.307 381 144 11 176 529 41 376 1.86e-72 241
Msa0951330 MtrunA17_Chr5g0431711 39.801 402 177 13 168 545 1 361 2.22e-72 240
Msa0951330 MtrunA17_Chr6g0452011 60.938 192 70 2 519 705 117 308 5.31e-72 241
Msa0951330 MtrunA17_Chr5g0423851 41.414 396 177 10 171 546 1 361 5.78e-71 236
Msa0951330 MtrunA17_Chr6g0465731 40.470 383 169 10 180 539 10 356 5.30e-70 233
Msa0951330 MtrunA17_Chr5g0430681 64.634 164 54 1 510 669 1 164 1.37e-68 222
Msa0951330 MtrunA17_Chr7g0235361 44.762 315 122 7 177 468 39 324 1.86e-64 218
Msa0951330 MtrunA17_Chr4g0019511 47.471 257 106 5 301 530 30 284 4.36e-59 202
Msa0951330 MtrunA17_Chr8g0359381 68.387 155 45 3 553 705 274 426 8.63e-56 206
Msa0951330 MtrunA17_Chr8g0341191 54.494 178 81 0 533 710 112 289 1.52e-54 201
Msa0951330 MtrunA17_Chr7g0250341 50.000 164 82 0 541 704 2 165 1.73e-52 179
Msa0951330 MtrunA17_Chr6g0458611 48.828 256 101 5 301 529 29 281 1.06e-51 182
Msa0951330 MtrunA17_Chr4g0075191 52.326 172 80 1 533 702 81 252 5.68e-50 186
Msa0951330 MtrunA17_Chr6g0455921 56.875 160 48 2 14 158 1 154 1.22e-47 165
Msa0951330 MtrunA17_Chr1g0208801 32.178 404 194 10 171 537 1 361 1.38e-45 167
Msa0951330 MtrunA17_Chr7g0224001 34.000 400 193 13 171 536 7 369 3.92e-45 166
Msa0951330 MtrunA17_Chr6g0469141 72.115 104 28 1 606 709 1 103 7.21e-44 159
Msa0951330 MtrunA17_Chr6g0471031 34.152 407 192 15 177 542 60 431 1.92e-40 154
Msa0951330 MtrunA17_Chr5g0419701 32.338 402 202 11 179 542 5 374 7.29e-40 151
Msa0951330 MtrunA17_Chr0c09g0493551 32.970 367 136 12 180 539 10 273 1.39e-39 147
Msa0951330 MtrunA17_Chr2g0297931 32.020 406 201 11 178 542 14 385 2.06e-39 150
Msa0951330 MtrunA17_Chr3g0114151 32.843 408 196 16 177 542 23 394 1.05e-38 148
Msa0951330 MtrunA17_Chr5g0419431 32.512 406 206 14 170 542 6 376 1.23e-38 148
Msa0951330 MtrunA17_Chr6g0459751 52.000 150 71 1 1 150 1 149 3.53e-38 140
Msa0951330 MtrunA17_Chr5g0395311 31.910 398 200 12 180 542 28 389 8.20e-37 144
Msa0951330 MtrunA17_Chr5g0425131 36.879 282 135 9 176 449 9 255 2.08e-36 137
Msa0951330 MtrunA17_Chr2g0306281 44.375 160 86 1 534 690 57 216 1.57e-34 138
Msa0951330 MtrunA17_Chr5g0416541 32.398 392 208 13 167 542 11 361 6.67e-34 134
Msa0951330 MtrunA17_Chr5g0431691 30.366 382 198 10 178 529 5 348 1.16e-33 133
Msa0951330 MtrunA17_Chr7g0236211 30.534 393 199 13 170 528 4 356 2.00e-33 132
Msa0951330 MtrunA17_Chr3g0129741 41.579 190 81 5 171 355 11 175 5.88e-33 125
Msa0951330 MtrunA17_Chr1g0209241 34.286 175 113 1 533 705 56 230 6.44e-33 127
Msa0951330 MtrunA17_Chr5g0411291 48.837 129 66 0 582 710 109 237 7.76e-33 135
Msa0951330 MtrunA17_Chr5g0433191 39.171 217 91 5 314 490 11 226 9.24e-33 126
Msa0951330 MtrunA17_Chr5g0419561 31.591 421 192 18 168 549 1 364 2.68e-32 129
Msa0951330 MtrunA17_Chr1g0166251 30.296 406 214 14 173 547 6 373 1.54e-31 127
Msa0951330 MtrunA17_Chr5g0408771 37.791 172 104 1 533 701 193 364 9.07e-31 125
Msa0951330 MtrunA17_Chr7g0227651 31.662 379 205 13 173 529 6 352 1.34e-30 124
Msa0951330 MtrunA17_Chr7g0227851 30.189 371 215 12 177 529 10 354 1.75e-30 124
Msa0951330 MtrunA17_Chr6g0450501 38.667 150 91 1 539 687 119 268 4.14e-30 126
Msa0951330 MtrunA17_Chr5g0438051 30.151 398 202 12 178 528 6 374 4.86e-30 123
Msa0951330 MtrunA17_Chr3g0107721 31.296 409 203 16 176 528 1 387 9.51e-30 122
Msa0951330 MtrunA17_Chr3g0085661 66.265 83 28 0 628 710 1 83 1.53e-29 123
Msa0951330 MtrunA17_Chr3g0132631 31.088 386 191 14 172 528 6 345 1.91e-29 120
Msa0951330 MtrunA17_Chr7g0246351 28.212 397 203 10 178 528 6 366 3.30e-28 117
Msa0951330 MtrunA17_Chr7g0262081 33.766 385 191 15 171 529 23 369 4.94e-28 117
Msa0951330 MtrunA17_Chr5g0420741 36.475 244 123 7 174 417 14 225 9.63e-28 113
Msa0951330 MtrunA17_Chr5g0431681 30.155 388 171 14 177 528 7 330 1.08e-27 115
Msa0951330 MtrunA17_Chr5g0431011 67.949 78 25 0 628 705 1 78 1.10e-27 118
Msa0951330 MtrunA17_Chr5g0396401 30.457 394 190 16 171 528 1 346 3.52e-27 114
Msa0951330 MtrunA17_Chr7g0226481 30.263 380 196 13 168 534 1 324 3.64e-27 113
Msa0951330 MtrunA17_Chr2g0277281 29.250 400 204 14 174 528 7 372 7.59e-27 113
Msa0951330 MtrunA17_Chr3g0086041 29.032 372 209 10 178 528 26 363 7.66e-27 113
Msa0951330 MtrunA17_Chr2g0332521 37.908 153 94 1 533 684 73 225 1.40e-26 116
Msa0951330 MtrunA17_Chr3g0080241 50.000 116 54 3 425 539 6 118 2.10e-26 105
Msa0951330 MtrunA17_Chr3g0137681 28.831 385 204 14 178 529 10 357 3.79e-26 111
Msa0951330 MtrunA17_Chr2g0278121 28.777 417 201 15 173 528 11 392 4.53e-26 111
Msa0951330 MtrunA17_Chr7g0262121 29.231 390 200 11 173 529 15 361 3.03e-25 108
Msa0951330 MtrunA17_Chr7g0262091 30.357 392 197 15 171 529 11 359 5.54e-25 107
Msa0951330 MtrunA17_Chr2g0278791 29.744 390 189 15 177 528 1 343 8.16e-25 107
Msa0951330 MtrunA17_Chr7g0273871 28.351 388 213 12 170 539 5 345 8.86e-25 106
Msa0951330 MtrunA17_Chr3g0093361 29.457 387 210 13 173 537 38 383 1.00e-24 107
Msa0951330 MtrunA17_Chr6g0458511 42.593 162 54 5 176 328 3 134 1.02e-24 100
Msa0951330 MtrunA17_Chr4g0006871 35.294 153 98 1 533 684 504 656 1.25e-24 110
Msa0951330 MtrunA17_Chr3g0136291 26.891 357 198 7 173 529 9 302 2.82e-24 104
Msa0951330 MtrunA17_Chr5g0416511 32.411 253 134 6 304 524 34 281 3.84e-24 103
Msa0951330 MtrunA17_Chr7g0227641 28.841 371 200 12 177 529 10 334 4.15e-24 104
Msa0951330 MtrunA17_Chr3g0086141 36.279 215 103 7 176 384 1 187 5.06e-24 100
Msa0951330 MtrunA17_Chr3g0138571 29.897 388 189 15 178 528 13 354 5.73e-24 104
Msa0951330 MtrunA17_Chr3g0129711 53.608 97 40 3 176 270 2 95 6.84e-24 96.7
Msa0951330 MtrunA17_Chr5g0426151 32.700 263 150 9 301 538 33 293 6.93e-24 103
Msa0951330 MtrunA17_Chr3g0138371 30.491 387 183 13 178 528 20 356 8.27e-24 104
Msa0951330 MtrunA17_Chr5g0412831 47.857 140 50 5 410 529 11 147 1.14e-23 99.0
Msa0951330 MtrunA17_Chr8g0357281 35.374 147 94 1 539 684 128 274 1.69e-23 106
Msa0951330 MtrunA17_Chr6g0466531 64.706 68 24 0 180 247 10 77 1.43e-22 93.2
Msa0951330 MtrunA17_Chr5g0426931 29.348 368 182 10 180 542 10 304 2.18e-22 100
Msa0951330 MtrunA17_Chr3g0137721 30.829 386 194 19 178 529 11 357 2.19e-22 100
Msa0951330 MtrunA17_Chr5g0396411 25.616 406 207 12 180 529 1 367 3.08e-22 100
Msa0951330 MtrunA17_Chr3g0091171 27.733 375 207 11 177 528 4 337 8.58e-22 97.8
Msa0951330 MtrunA17_Chr3g0137701 29.723 397 192 13 178 528 9 364 1.44e-21 97.8
Msa0951330 MtrunA17_Chr2g0278101 31.488 289 148 10 173 444 7 262 2.35e-21 95.9
Msa0951330 MtrunA17_Chr3g0122551 46.281 121 60 1 21 141 21 136 3.39e-21 92.4
Msa0951330 MtrunA17_Chr2g0295981 40.541 111 63 1 534 641 21 131 6.11e-21 89.4
Msa0951330 MtrunA17_Chr8g0373051 26.500 400 222 13 178 548 10 366 1.84e-20 94.0
Msa0951330 MtrunA17_Chr7g0235851 30.390 385 209 14 178 539 5 353 2.80e-20 93.6
Msa0951330 MtrunA17_Chr6g0465661 54.217 83 37 1 170 252 24 105 5.50e-20 85.9
Msa0951330 MtrunA17_Chr7g0235821 30.831 373 200 13 178 528 5 341 1.50e-19 91.3
Msa0951330 MtrunA17_Chr5g0422791 37.113 194 77 8 377 538 7 187 1.58e-19 87.4
Msa0951330 MtrunA17_Chr7g0274231 33.333 216 112 6 178 387 12 201 2.85e-19 88.6
Msa0951330 MtrunA17_Chr3g0139601 35.021 237 106 8 178 411 13 204 6.31e-19 90.5
Msa0951330 MtrunA17_Chr6g0466471 51.220 82 39 1 171 252 1 81 6.51e-19 82.0
Msa0951330 MtrunA17_Chr6g0461781 49.057 106 48 3 427 529 10 112 1.09e-18 82.8
Msa0951330 MtrunA17_Chr6g0465651 39.310 145 64 4 343 467 2 142 2.42e-18 82.4
Msa0951330 MtrunA17_Chr3g0087391 27.621 391 215 14 173 528 14 371 4.33e-18 87.0
Msa0951330 MtrunA17_Chr2g0278091 26.835 395 193 12 173 528 7 344 4.45e-18 87.0
Msa0951330 MtrunA17_Chr2g0278801 29.719 249 134 8 177 418 1 215 5.19e-18 84.3
Msa0951330 MtrunA17_Chr3g0129731 40.132 152 64 5 398 528 21 166 9.94e-18 82.4
Msa0951330 MtrunA17_Chr5g0423991 37.908 153 68 4 236 388 11 136 1.27e-17 80.5
Msa0951330 MtrunA17_Chr7g0238361 32.394 213 117 4 178 389 3 189 1.87e-17 85.1
Msa0951330 MtrunA17_Chr5g0412161 34.211 190 100 6 295 477 28 199 4.94e-17 80.1
Msa0951330 MtrunA17_Chr7g0227771 32.075 212 108 6 178 384 4 184 1.07e-16 79.3
Msa0951330 MtrunA17_Chr6g0453351 37.097 124 75 1 5 128 4 124 4.27e-16 78.6
Msa0951330 MtrunA17_Chr4g0027461 31.356 236 126 9 178 392 9 229 8.29e-16 79.3
Msa0951330 MtrunA17_Chr1g0207991 32.083 240 126 10 329 537 18 251 1.13e-15 77.8
Msa0951330 MtrunA17_Chr7g0235431 27.603 413 189 15 178 547 16 361 1.58e-15 79.0
Msa0951330 MtrunA17_Chr7g0227821 60.000 60 24 0 177 236 10 69 1.71e-15 76.6
Msa0951330 MtrunA17_Chr3g0143051 32.558 172 79 4 178 345 19 157 2.26e-15 74.3
Msa0951330 MtrunA17_Chr8g0363981 27.734 256 138 9 161 409 8 223 2.32e-15 79.0
Msa0951330 MtrunA17_Chr8g0378391 55.000 60 27 0 177 236 10 69 3.23e-15 71.2
Msa0951330 MtrunA17_Chr7g0222241 27.098 417 229 15 178 538 6 403 3.80e-15 78.6
Msa0951330 MtrunA17_Chr7g0222281 27.098 417 229 15 178 538 6 403 3.80e-15 78.6
Msa0951330 MtrunA17_Chr7g0227621 55.000 60 27 0 177 236 10 69 7.50e-15 71.2
Msa0951330 MtrunA17_Chr7g0236151 24.090 357 194 10 173 528 4 284 1.01e-14 75.9
Msa0951330 MtrunA17_Chr7g0236191 24.090 357 194 10 173 528 4 284 1.01e-14 75.9
Msa0951330 MtrunA17_Chr8g0374951 29.932 147 75 2 539 684 118 237 1.35e-14 75.9
Msa0951330 MtrunA17_Chr3g0124041 61.017 59 23 0 178 236 12 70 1.83e-14 70.1
Msa0951330 MtrunA17_Chr4g0027231 30.128 312 175 14 119 397 31 332 2.78e-14 76.3
Msa0951330 MtrunA17_Chr8g0360061 30.970 268 145 14 177 424 18 265 2.98e-14 75.9
Msa0951330 MtrunA17_Chr6g0461771 48.101 79 41 0 337 415 32 110 3.27e-14 69.7
Msa0951330 MtrunA17_Chr1g0166231 55.738 61 20 1 555 615 12 65 5.43e-14 67.4
Msa0951330 MtrunA17_Chr7g0236101 29.630 189 98 6 173 359 4 159 6.20e-14 70.5
Msa0951330 MtrunA17_Chr5g0435741 33.953 215 104 6 177 386 32 213 1.01e-13 74.3
Msa0951330 MtrunA17_Chr1g0162511 38.636 88 54 0 600 687 6 93 3.51e-13 72.4
Msa0951330 MtrunA17_Chr7g0250271 43.182 88 47 1 177 264 17 101 3.83e-13 66.6
Msa0951330 MtrunA17_Chr0c29g0494011 43.182 88 47 1 177 264 17 101 3.83e-13 66.6
Msa0951330 MtrunA17_Chr6g0480701 40.000 95 57 0 600 694 5 99 3.85e-13 73.2
Msa0951330 MtrunA17_Chr7g0236221 36.752 117 61 4 178 287 9 119 7.19e-13 66.2
Msa0951330 MtrunA17_Chr8g0360071 29.536 237 116 10 172 386 7 214 1.09e-12 70.9
Msa0951330 MtrunA17_Chr7g0227631 27.586 261 155 10 297 529 24 278 1.55e-12 69.3
Msa0951330 MtrunA17_Chr7g0215531 30.435 207 88 7 169 372 4 157 1.67e-12 66.2
Msa0951330 MtrunA17_Chr7g0227241 30.342 234 119 9 329 528 15 238 1.78e-12 68.6
Msa0951330 MtrunA17_Chr2g0278131 47.059 68 36 0 173 240 9 76 2.24e-12 63.2
Msa0951330 MtrunA17_Chr8g0362021 29.767 215 118 6 178 388 20 205 2.49e-12 69.7
Msa0951330 MtrunA17_Chr1g0167251 55.932 59 26 0 178 236 12 70 3.31e-12 62.8
Msa0951330 MtrunA17_Chr3g0142561 38.636 88 49 1 178 265 17 99 4.17e-12 63.9
Msa0951330 MtrunA17_Chr1g0164901 32.743 226 110 10 178 392 9 203 4.19e-12 68.6
Msa0951330 MtrunA17_Chr7g0236171 49.180 61 31 0 178 238 9 69 4.84e-12 65.1
Msa0951330 MtrunA17_Chr7g0236131 49.180 61 31 0 178 238 9 69 4.84e-12 65.1
Msa0951330 MtrunA17_Chr7g0236081 49.180 61 31 0 178 238 9 69 4.84e-12 65.1
Msa0951330 MtrunA17_Chr2g0319941 31.739 230 104 11 177 388 20 214 5.72e-12 68.6
Msa0951330 MtrunA17_Chr7g0215331 28.302 265 138 11 301 528 52 301 9.15e-12 67.0
Msa0951330 MtrunA17_Chr5g0406891 39.655 116 59 6 420 529 47 157 9.59e-12 65.1
Msa0951330 MtrunA17_Chr8g0362461 29.680 219 126 7 177 388 8 205 2.29e-11 66.6
Msa0951330 MtrunA17_Chr7g0262131 40.860 93 49 2 171 263 11 97 2.31e-11 62.0
Msa0951330 MtrunA17_Chr8g0363941 30.636 173 92 6 177 343 15 165 4.34e-11 62.4
Msa0951330 MtrunA17_Chr5g0437351 34.483 87 56 1 180 265 17 103 7.74e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0951330 AT3G27080.1 42.857 140 79 1 21 160 20 158 1.08e-26 108
Msa0951330 AT1G27390.1 37.584 149 92 1 1 149 1 148 1.85e-23 99.4
Msa0951330 AT3G27070.1 48.624 109 56 0 21 129 14 122 2.62e-23 98.6
Msa0951330 AT4G15060.2 30.909 275 138 8 177 441 25 257 2.63e-20 94.7
Msa0951330 AT4G15060.1 30.909 275 138 8 177 441 171 403 7.52e-20 94.4
Msa0951330 AT5G38590.1 29.607 331 165 13 177 496 1 274 1.01e-19 90.5
Msa0951330 AT5G38590.2 29.607 331 165 13 177 496 1 274 1.63e-19 92.0
Msa0951330 AT4G10400.2 31.136 273 134 10 177 441 1 227 1.74e-18 89.0
Msa0951330 AT4G10400.3 31.136 273 134 10 177 441 1 227 1.74e-18 89.0
Msa0951330 AT4G10400.1 31.136 273 134 10 177 441 1 227 1.74e-18 89.0
Msa0951330 AT5G40930.1 36.913 149 87 2 15 163 14 155 2.63e-18 84.0
Msa0951330 AT5G40930.2 41.129 124 70 2 15 138 14 134 7.77e-18 81.6
Msa0951330 AT4G09920.2 31.556 225 110 7 177 393 1 189 1.08e-17 84.7
Msa0951330 AT4G09920.4 31.556 225 110 7 177 393 1 189 1.08e-17 84.7
Msa0951330 AT4G09920.3 31.556 225 110 7 177 393 1 189 1.08e-17 84.7
Msa0951330 AT5G53635.1 28.731 268 145 8 180 441 2 229 6.10e-17 84.3
Msa0951330 AT5G41840.1 30.515 272 131 11 178 428 14 248 9.89e-17 84.3
Msa0951330 AT5G56690.1 30.942 223 107 6 179 389 3 190 6.72e-16 80.9
Msa0951330 AT5G22670.1 27.957 279 148 7 173 441 6 241 9.05e-16 80.9
Msa0951330 AT3G58880.1 30.325 277 139 10 176 439 1 236 9.34e-16 80.9
Msa0951330 AT3G50710.1 25.532 423 234 12 177 538 1 403 1.38e-15 80.1
Msa0951330 AT4G14103.3 28.623 276 155 7 171 440 1 240 3.80e-15 78.6
Msa0951330 AT4G14103.1 28.623 276 155 7 171 440 1 240 3.80e-15 78.6
Msa0951330 AT4G14096.2 30.576 278 145 9 171 440 1 238 4.08e-15 79.0
Msa0951330 AT4G14096.1 30.576 278 145 9 171 440 1 238 4.08e-15 79.0
Msa0951330 AT1G55030.2 23.963 434 220 12 176 539 17 410 4.97e-15 78.6
Msa0951330 AT1G55030.1 23.963 434 220 12 176 539 7 400 6.02e-15 78.2
Msa0951330 AT1G55660.2 31.336 217 113 7 176 386 51 237 8.02e-15 77.4
Msa0951330 AT1G55660.1 30.909 220 116 7 176 389 51 240 9.00e-15 78.2
Msa0951330 AT4G14103.2 28.996 269 149 7 178 440 8 240 9.21e-15 77.8
Msa0951330 AT3G03040.1 31.250 240 124 6 177 405 1 210 1.26e-14 77.4
Msa0951330 AT3G49030.1 22.931 423 219 12 178 529 21 407 1.89e-14 76.6
Msa0951330 AT5G22700.2 32.394 213 104 6 178 386 6 182 3.90e-14 75.9
Msa0951330 AT5G22700.3 32.394 213 104 6 178 386 6 182 3.90e-14 75.9
Msa0951330 AT5G22700.1 32.394 213 104 6 178 386 6 182 3.90e-14 75.9
Msa0951330 AT5G22700.4 32.394 213 104 6 178 386 6 182 3.90e-14 75.9
Msa0951330 AT1G78730.1 28.070 228 115 6 170 397 14 192 3.94e-14 75.5
Msa0951330 AT5G22700.5 32.394 213 104 6 178 386 43 219 4.61e-14 75.9
Msa0951330 AT5G22700.6 32.394 213 104 6 178 386 43 219 4.65e-14 75.5
Msa0951330 AT4G00160.1 30.093 216 110 5 178 386 16 197 5.87e-14 75.5
Msa0951330 AT3G62440.1 33.333 270 147 12 177 436 1 247 7.19e-14 75.1
Msa0951330 AT1G27390.2 40.449 89 52 1 61 149 5 92 1.92e-13 68.9
Msa0951330 AT3G58860.1 30.545 275 136 11 177 439 6 237 4.38e-13 72.4
Msa0951330 AT3G42770.1 33.028 218 100 8 183 386 4 189 5.85e-13 72.4
Msa0951330 AT4G13965.1 29.665 209 115 3 178 386 10 186 6.17e-13 72.0
Msa0951330 AT3G60040.4 30.342 234 115 9 172 386 7 211 6.55e-13 72.4
Msa0951330 AT1G16930.2 30.041 243 118 9 178 412 15 213 8.44e-13 71.6
Msa0951330 AT1G16930.1 30.041 243 118 9 178 412 15 213 8.44e-13 71.6
Msa0951330 AT1G16930.3 30.041 243 118 9 178 412 15 213 8.44e-13 71.6
Msa0951330 AT3G60040.1 30.342 234 115 9 172 386 226 430 9.27e-13 72.4
Msa0951330 AT3G60040.3 30.342 234 115 9 172 386 227 431 9.28e-13 72.4
Msa0951330 AT3G60040.5 30.342 234 115 9 172 386 224 428 1.20e-12 71.6
Msa0951330 AT3G60040.2 30.342 234 115 9 172 386 226 430 1.25e-12 71.6
Msa0951330 AT5G22720.1 29.630 243 128 8 157 392 4 210 1.84e-12 70.5
Msa0951330 AT5G22610.1 26.440 382 191 13 171 489 11 365 3.32e-12 69.7
Msa0951330 AT3G58920.1 27.957 279 154 11 177 440 1 247 3.74e-12 69.7
Msa0951330 AT3G49030.2 22.195 401 223 10 178 529 21 381 4.07e-12 69.3
Msa0951330 AT5G44940.1 26.371 383 213 15 178 531 5 347 4.32e-12 68.9
Msa0951330 AT5G56380.2 28.947 228 116 6 177 392 1 194 4.57e-12 69.3
Msa0951330 AT5G56380.1 28.947 228 116 6 177 392 1 194 4.57e-12 69.3
Msa0951330 AT1G78750.2 26.549 226 127 6 177 393 17 212 4.60e-12 69.3
Msa0951330 AT1G78750.1 26.549 226 127 6 177 393 17 212 4.60e-12 69.3
Msa0951330 AT3G59240.1 28.194 227 123 7 171 388 1 196 5.71e-12 69.3
Msa0951330 AT3G59170.1 31.707 246 104 10 178 390 7 221 5.94e-12 68.9
Msa0951330 AT5G56440.1 29.358 218 114 5 177 388 1 184 8.63e-12 68.6
Msa0951330 AT1G66310.1 29.717 212 118 6 177 388 18 198 8.79e-12 68.6
Msa0951330 AT5G27750.2 31.304 230 132 8 178 404 5 211 1.05e-11 67.8
Msa0951330 AT1G78760.1 24.766 214 122 5 178 386 16 195 1.58e-11 67.8
Msa0951330 AT5G27750.1 31.416 226 129 8 178 400 5 207 1.98e-11 67.4
Msa0951330 AT3G58900.3 28.507 221 124 6 177 391 1 193 2.48e-11 65.9
Msa0951330 AT3G58900.2 28.507 221 124 6 177 391 1 193 2.59e-11 66.2
Msa0951330 AT3G58900.1 28.507 221 124 6 177 391 1 193 2.59e-11 66.2
Msa0951330 AT5G22610.2 29.545 220 127 6 171 388 11 204 7.90e-11 65.5
Msa0951330 AT3G58900.4 28.507 221 124 6 177 391 1 193 7.95e-11 65.5
Msa0951330 AT1G66320.1 28.293 205 116 7 182 386 34 207 9.51e-11 65.1

Find 166 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGAATATTTGCATCTTAA+AGG 0.149165 6_3:+41359148 Msa0951330:CDS
GATATGACTATCAACTTTAA+TGG 0.210566 6_3:+41359675 Msa0951330:CDS
AATGAAGCATGAATGTATTT+TGG 0.227645 6_3:+41356962 Msa0951330:CDS
TCTCAATCAGCGTTTGTAAA+AGG 0.227704 6_3:+41360726 Msa0951330:CDS
AAGCCATGATTAACAATTTC+CGG 0.238434 6_3:-41357948 None:intergenic
AGTTTAGCGTCGTGCGAGTC+TGG 0.245129 6_3:-41357575 None:intergenic
CTTTAAGATGCAAATATTCT+AGG 0.245527 6_3:-41359147 None:intergenic
ACTTAATTCTTATTAAACTA+TGG 0.259041 6_3:+41359305 Msa0951330:CDS
GAGGCAGTTCCAATGATATT+TGG 0.274990 6_3:-41357664 None:intergenic
CGCAGAGGCTCAATGATTTC+CGG 0.278977 6_3:+41360613 Msa0951330:CDS
ATATGACTATCAACTTTAAT+GGG 0.282179 6_3:+41359676 Msa0951330:CDS
ATACATCCCACTAATGAAAT+AGG 0.309813 6_3:-41360636 None:intergenic
TTCAGTTGGTGATGTTAAAC+AGG 0.312775 6_3:+41361121 Msa0951330:CDS
GCGAAAATGTTTAATGGCTT+TGG 0.313047 6_3:+41361092 Msa0951330:CDS
AAATTATCTTGATTCTGTTA+TGG 0.319855 6_3:+41360869 Msa0951330:CDS
TTTGAGAACAGTTAGTGTTT+TGG 0.322546 6_3:-41358996 None:intergenic
ATCGAACGCGATTCAACTTC+AGG 0.329639 6_3:-41359078 None:intergenic
ATTAGTGGGATGTATGTATA+AGG 0.347057 6_3:+41360644 Msa0951330:CDS
AAAATACATTCATGCTTCAT+TGG 0.354541 6_3:-41356960 None:intergenic
ATATAAAGAATTTGAAGCTT+GGG 0.354675 6_3:-41359379 None:intergenic
TCCAATGATATTTGGTAAGC+TGG 0.360593 6_3:-41357656 None:intergenic
ATCGCGTTCGATTTGAAAAT+CGG 0.360890 6_3:+41359089 Msa0951330:CDS
TCCCAGCTCTATGGCGGAAA+TGG 0.371688 6_3:+41360904 Msa0951330:CDS
AGTTTAATAAGAATTAAGTT+TGG 0.379853 6_3:-41359301 None:intergenic
TGTGGGAACGGCAACGGCTT+CGG 0.384008 6_3:+41360938 Msa0951330:CDS
CGAACCATTACTTCCTTCTC+TGG 0.388684 6_3:+41358493 Msa0951330:CDS
AAATGAATTTCCCAGCTCTA+TGG 0.389839 6_3:+41360895 Msa0951330:CDS
CCAAGGAGTATCGGGGTTGT+TGG 0.391259 6_3:-41357513 None:intergenic
AGATGCAAATATTCTAGGTT+AGG 0.392295 6_3:-41359142 None:intergenic
ATCTTTGGCCCTTTCTAAGT+TGG 0.395987 6_3:+41359225 Msa0951330:CDS
TGCCGGAGACCCCTCTCAAT+AGG 0.398022 6_3:-41360993 None:intergenic
TTTGTCAAGTTCCAGACAAT+AGG 0.399146 6_3:-41359173 None:intergenic
GACAACTTTACGCAACCTAT+TGG 0.400474 6_3:-41360685 None:intergenic
TTCAGTCTCTATTTCAAAGC+TGG 0.402124 6_3:+41357469 Msa0951330:intron
TGTAAAAGGGAAACAAATCT+TGG 0.405648 6_3:+41360740 Msa0951330:CDS
CCTAGGAGCCAAGGAGTATC+GGG 0.413498 6_3:-41357521 None:intergenic
GTTTAGCGTCGTGCGAGTCT+GGG 0.414933 6_3:-41357574 None:intergenic
TGATATTTGGTAAGCTGGAT+TGG 0.417105 6_3:-41357651 None:intergenic
GAAATTGTTAATCATGGCTT+AGG 0.418031 6_3:+41357951 Msa0951330:CDS
GGTTAAGCCCTCGTCATTGT+TGG 0.418440 6_3:+41359326 Msa0951330:CDS
GATTCATTCCATACCATTCA+AGG 0.418786 6_3:+41357080 Msa0951330:CDS
GTTAAGCCCTCGTCATTGTT+GGG 0.425860 6_3:+41359327 Msa0951330:CDS
GGCTTAGGTCAGCAATCAAA+AGG 0.428953 6_3:+41357966 Msa0951330:CDS
ATCCATTTCCGCCATAGAGC+TGG 0.430718 6_3:-41360906 None:intergenic
CCCGATACTCCTTGGCTCCT+AGG 0.431830 6_3:+41357521 Msa0951330:CDS
CTCAATCAGCGTTTGTAAAA+GGG 0.433903 6_3:+41360727 Msa0951330:CDS
GATGAAAATAATGGGCTTCA+AGG 0.436508 6_3:-41358972 None:intergenic
GGCTTTGGTGTAGGTTCAGT+TGG 0.438718 6_3:+41361107 Msa0951330:CDS
TCAAATTCTTTATATTAAAA+CGG 0.440297 6_3:+41359387 Msa0951330:CDS
TTGCGAAGGTCCTTGCCAAT+AGG 0.442769 6_3:+41360670 Msa0951330:CDS
GCCGGAGACCCCTCTCAATA+GGG 0.444435 6_3:-41360992 None:intergenic
ACAATCTAACCAACTTAGAA+AGG 0.446499 6_3:-41359234 None:intergenic
CATCCGGAAATTGTTAATCA+TGG 0.447050 6_3:+41357945 Msa0951330:CDS
AAAGCTATCGAAGCGATCAT+AGG 0.447357 6_3:-41358696 None:intergenic
TATTGAGAGGGGTCTCCGGC+AGG 0.447523 6_3:+41360995 Msa0951330:CDS
TTATCGTGGAAGCGGAGAAC+GGG 0.450856 6_3:-41358653 None:intergenic
TGAATGGTATGGAATGAATC+AGG 0.452363 6_3:-41357077 None:intergenic
CAAGGAGTATCGGGGTTGTT+GGG 0.456323 6_3:-41357512 None:intergenic
TTTCCGGCCTATTTCATTAG+TGG 0.458284 6_3:+41360629 Msa0951330:CDS
AATATAAAGAATTTGAAGCT+TGG 0.458309 6_3:-41359380 None:intergenic
AGTTGGTTAGATTGTGTATC+GGG 0.460017 6_3:+41359242 Msa0951330:CDS
CTCTATTTCAAAGCTGGAGG+AGG 0.463495 6_3:+41357475 Msa0951330:CDS
TCCAGCTTACCAAATATCAT+TGG 0.465227 6_3:+41357655 Msa0951330:CDS
AAATCAGATTACGGCGGTGG+CGG 0.466548 6_3:-41358799 None:intergenic
TAAGGTTCATGAGCAACATC+CGG 0.468307 6_3:+41357929 Msa0951330:intron
AGCATATAATATACCTTGAA+TGG 0.468924 6_3:-41357093 None:intergenic
TCTTAAAGGTACCTATTGTC+TGG 0.469289 6_3:+41359162 Msa0951330:CDS
ATGCTGAGAATTTAACAAGA+TGG 0.472309 6_3:+41357015 Msa0951330:CDS
GGCCCCTAAAATGCTAGAAA+CGG 0.472613 6_3:-41361145 None:intergenic
TCCTAGGAGCCAAGGAGTAT+CGG 0.473479 6_3:-41357522 None:intergenic
TTCCGGCCTATTTCATTAGT+GGG 0.475705 6_3:+41360630 Msa0951330:CDS
ATAATATACCTTGAATGGTA+TGG 0.483002 6_3:-41357088 None:intergenic
ATGCGACACAATAACTCATC+TGG 0.483382 6_3:-41358551 None:intergenic
CATCCCTTTAACAGTATTGG+AGG 0.487020 6_3:+41359496 Msa0951330:intron
TCAATAGGGAACTCATCTGT+TGG 0.488510 6_3:-41360978 None:intergenic
TATTCTTATGTCAGCAGTAG+TGG 0.496356 6_3:+41361067 Msa0951330:CDS
AACTTCAGGGATTTCAGAGA+TGG 0.498133 6_3:-41359064 None:intergenic
AAGTTGGTTAGATTGTGTAT+CGG 0.498569 6_3:+41359241 Msa0951330:CDS
CCATCCTCTTTCAATTAACC+AGG 0.499066 6_3:+41358736 Msa0951330:CDS
GCATAGTGTGAGCCATTCCT+AGG 0.502298 6_3:-41357538 None:intergenic
AGGGTCTTGTTCTTCTACAA+AGG 0.505826 6_3:+41357986 Msa0951330:CDS
ATGTTTAATGGCTTTGGTGT+AGG 0.506897 6_3:+41361098 Msa0951330:CDS
GGGTCCACCGCTTAGAAAGA+AGG 0.510495 6_3:-41358613 None:intergenic
CAATAGGGAACTCATCTGTT+GGG 0.514301 6_3:-41360977 None:intergenic
ACGGGAAGTGAATAGAAGAG+TGG 0.516061 6_3:-41358635 None:intergenic
TACTCCTTGGCTCCTAGGAA+TGG 0.516178 6_3:+41357526 Msa0951330:CDS
TATAAAGAATTTGAAGCTTG+GGG 0.516976 6_3:-41359378 None:intergenic
TCCCTATTGAGAGGGGTCTC+CGG 0.517179 6_3:+41360991 Msa0951330:CDS
CCAACAACCCCGATACTCCT+TGG 0.518823 6_3:+41357513 Msa0951330:CDS
TCGAACGCGATTCAACTTCA+GGG 0.521300 6_3:-41359077 None:intergenic
TTTATCGTGGAAGCGGAGAA+CGG 0.526551 6_3:-41358654 None:intergenic
TTTCCATTCCTCTGATGATG+TGG 0.528106 6_3:-41359520 None:intergenic
CCTGGTTAATTGAAAGAGGA+TGG 0.531156 6_3:-41358736 None:intergenic
CAATCTAACCAACTTAGAAA+GGG 0.531508 6_3:-41359233 None:intergenic
TTTGAAGCTTGGGGCAAAGT+CGG 0.532454 6_3:-41359369 None:intergenic
CGGGAAGTGAATAGAAGAGT+GGG 0.532935 6_3:-41358634 None:intergenic
AGGAATGGCTCACACTATGC+AGG 0.537324 6_3:+41357541 Msa0951330:CDS
ACACATTCAAGAATCGAAGA+TGG 0.538312 6_3:-41359546 None:intergenic
TCCATTTCCGCCATAGAGCT+GGG 0.539397 6_3:-41360905 None:intergenic
ATTTGGTAAGCTGGATTGGA+GGG 0.539960 6_3:-41357647 None:intergenic
TATTTGGTAAGCTGGATTGG+AGG 0.540573 6_3:-41357648 None:intergenic
TTTAGCGTCGTGCGAGTCTG+GGG 0.545659 6_3:-41357573 None:intergenic
ATTCTTATGTCAGCAGTAGT+GGG 0.546711 6_3:+41361068 Msa0951330:CDS
TTATTCTTGTTACCCGCAGA+AGG 0.547775 6_3:+41361038 Msa0951330:CDS
CGCAATACAACGTCGTGTTG+AGG 0.549210 6_3:+41358922 Msa0951330:CDS
GAGATAAAGGATCACCCTGC+CGG 0.550314 6_3:-41361010 None:intergenic
CACATTCAAGAATCGAAGAT+GGG 0.550835 6_3:-41359545 None:intergenic
TGAGCCATTCCTAGGAGCCA+AGG 0.551986 6_3:-41357530 None:intergenic
ATTGGAACTGCCTCATGCTA+AGG 0.552894 6_3:+41357673 Msa0951330:CDS
AGAATATTAAATCCTTCTGC+GGG 0.553474 6_3:-41361050 None:intergenic
AAGAATATTAAATCCTTCTG+CGG 0.554465 6_3:-41361051 None:intergenic
TGCTGAGAATTTAACAAGAT+GGG 0.555246 6_3:+41357016 Msa0951330:CDS
CTACCGATGTGTTGATGTTG+TGG 0.558498 6_3:-41358838 None:intergenic
CAACCCTTCTTTCTAAGCGG+TGG 0.560431 6_3:+41358609 Msa0951330:CDS
ATCCCACTAATGAAATAGGC+CGG 0.566141 6_3:-41360632 None:intergenic
GGACCACATCATCAGAGGAA+TGG 0.569200 6_3:+41359517 Msa0951330:CDS
TGAGTGTGTGGGAACGGCAA+CGG 0.572120 6_3:+41360932 Msa0951330:CDS
GAGAAATCAGATTACGGCGG+TGG 0.579501 6_3:-41358802 None:intergenic
AAAGGGAAACAAATCTTGGA+TGG 0.582469 6_3:+41360744 Msa0951330:CDS
AGGTGTGTCTATACAACTTG+AGG 0.583094 6_3:-41358952 None:intergenic
GTTAAATTCTCAGCATCACG+AGG 0.583718 6_3:-41357008 None:intergenic
TGAGCCTGGTTAATTGAAAG+AGG 0.586909 6_3:-41358740 None:intergenic
TCTGGACTCGACAACAGTTG+TGG 0.593958 6_3:+41358511 Msa0951330:CDS
ATTGAGAGGGGTCTCCGGCA+GGG 0.597385 6_3:+41360996 Msa0951330:CDS
TTGAAAGAGGATGGATCATG+AGG 0.598686 6_3:-41358727 None:intergenic
AGTCTCTATTTCAAAGCTGG+AGG 0.598884 6_3:+41357472 Msa0951330:intron
TTCTTATGTCAGCAGTAGTG+GGG 0.599527 6_3:+41361069 Msa0951330:CDS
GCTTAGGTCAGCAATCAAAA+GGG 0.601706 6_3:+41357967 Msa0951330:CDS
TGCAAATGAAGCACTAGATG+AGG 0.601863 6_3:+41360776 Msa0951330:CDS
AATGTGGATATCTTTCTCGC+GGG 0.604209 6_3:-41358879 None:intergenic
CAGATGAGTTCCCTATTGAG+AGG 0.606873 6_3:+41360982 Msa0951330:CDS
AGATGAGTTCCCTATTGAGA+GGG 0.609653 6_3:+41360983 Msa0951330:CDS
CTACAACCCTTCTTTCTAAG+CGG 0.610021 6_3:+41358606 Msa0951330:CDS
TATGTATAAGGTGCTTGCGA+AGG 0.610793 6_3:+41360656 Msa0951330:CDS
GATATCTGAGTGTGTGGGAA+CGG 0.611325 6_3:+41360926 Msa0951330:CDS
CTTTACGCAACCTATTGGCA+AGG 0.611830 6_3:-41360680 None:intergenic
CTAGCCATGTGTTGATAATG+TGG 0.614830 6_3:-41358895 None:intergenic
TAATGTGGATATCTTTCTCG+CGG 0.617845 6_3:-41358880 None:intergenic
TCGAATTTGAATTTCCTCAG+TGG 0.619766 6_3:-41356933 None:intergenic
GAGTCCAGAGAAGGAAGTAA+TGG 0.620848 6_3:-41358497 None:intergenic
GGTCCACCGCTTAGAAAGAA+GGG 0.627848 6_3:-41358612 None:intergenic
ACTGTTGTCGAGTCCAGAGA+AGG 0.631353 6_3:-41358506 None:intergenic
CGGAAATCATTGAGCCTCTG+CGG 0.632614 6_3:-41360612 None:intergenic
TTGGAGGACCACATCATCAG+AGG 0.633827 6_3:+41359512 Msa0951330:CDS
TGAATTTCCCAGCTCTATGG+CGG 0.637590 6_3:+41360898 Msa0951330:CDS
GAAATGGATATCTGAGTGTG+TGG 0.638924 6_3:+41360920 Msa0951330:CDS
TATGACTATCAACTTTAATG+GGG 0.641619 6_3:+41359677 Msa0951330:CDS
TCTTATGTCAGCAGTAGTGG+GGG 0.649660 6_3:+41361070 Msa0951330:CDS
ATGTGGATATCTTTCTCGCG+GGG 0.660945 6_3:-41358878 None:intergenic
ATATATACTACCTTAGCATG+AGG 0.662330 6_3:-41357683 None:intergenic
TCAGTTGGTGATGTTAAACA+GGG 0.667468 6_3:+41361122 Msa0951330:CDS
TGAAAAGGCATACGACTCGG+TGG 0.672995 6_3:+41360842 Msa0951330:CDS
ATATCCACATTATCAACACA+TGG 0.676298 6_3:+41358891 Msa0951330:CDS
CATCATCCCAACAATGACGA+GGG 0.682224 6_3:-41359333 None:intergenic
TTAAATTCTCAGCATCACGA+GGG 0.689236 6_3:-41357007 None:intergenic
AAATGGATATCTGAGTGTGT+GGG 0.694251 6_3:+41360921 Msa0951330:CDS
ACATCATCCCAACAATGACG+AGG 0.696869 6_3:-41359334 None:intergenic
GATGAGTTCCCTATTGAGAG+GGG 0.698876 6_3:+41360984 Msa0951330:CDS
GCTGAGAATTTAACAAGATG+GGG 0.700811 6_3:+41357017 Msa0951330:CDS
CGAAGGTGAATAGTCCGCAG+AGG 0.703867 6_3:+41360598 Msa0951330:intron
CTAGGAGCCAAGGAGTATCG+GGG 0.711894 6_3:-41357520 None:intergenic
AATGGTTCGAGAGAGCGTCG+TGG 0.715592 6_3:-41358479 None:intergenic
TATCCACAACATCAACACAT+CGG 0.716078 6_3:+41358835 Msa0951330:CDS
GGGAAGTGAATAGAAGAGTG+GGG 0.727583 6_3:-41358633 None:intergenic
TGCGAGAAATCAGATTACGG+CGG 0.739058 6_3:-41358805 None:intergenic
CGGTGATGGATTATCCACTG+AGG 0.770366 6_3:+41356919 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTATTCATCATTTTA+GGG + chr6_3:41357128-41357147 Msa0951330:intron 10.0%
!!! AATTTTCTTAAATTATTTAG+AGG + chr6_3:41357234-41357253 Msa0951330:intron 10.0%
!! TCAAATTCTTTATATTAAAA+CGG + chr6_3:41359387-41359406 Msa0951330:CDS 10.0%
!!! AACTAATTTTATATTTGATT+TGG - chr6_3:41360328-41360347 None:intergenic 10.0%
!! AATCAAATATAAAATTAGTT+AGG + chr6_3:41360328-41360347 Msa0951330:intron 10.0%
!!! GAAATATTATTCATCATTTT+AGG + chr6_3:41357127-41357146 Msa0951330:intron 15.0%
!!! TTATTCTTATACCTTTTTTA+AGG + chr6_3:41357867-41357886 Msa0951330:intron 15.0%
!!! TTATTCTTATACCTTTTTTA+AGG + chr6_3:41357867-41357886 Msa0951330:intron 15.0%
!!! TATTGATAAACACAATTTTT+AGG - chr6_3:41358089-41358108 None:intergenic 15.0%
!! CAATTAATTATCAAACATAT+TGG - chr6_3:41358237-41358256 None:intergenic 15.0%
!!! CAATATGTTTGATAATTAAT+TGG + chr6_3:41358235-41358254 Msa0951330:intron 15.0%
!!! TTGTTATTTATTATGTTGTA+AGG + chr6_3:41358368-41358387 Msa0951330:intron 15.0%
!! AACAGTATTTAAAAAATCTT+TGG + chr6_3:41359210-41359229 Msa0951330:CDS 15.0%
!! AGTTTAATAAGAATTAAGTT+TGG - chr6_3:41359304-41359323 None:intergenic 15.0%
!! ACTTAATTCTTATTAAACTA+TGG + chr6_3:41359305-41359324 Msa0951330:CDS 15.0%
!!! GGTATATTCTTTTATAATAT+CGG - chr6_3:41360369-41360388 None:intergenic 15.0%
!! TGAATCATAAAAAGAAAAAT+CGG + chr6_3:41360436-41360455 Msa0951330:intron 15.0%
!!! TTGAACTTATGTTTTTTTTA+GGG - chr6_3:41360486-41360505 None:intergenic 15.0%
!!! TTTGAACTTATGTTTTTTTT+AGG - chr6_3:41360487-41360506 None:intergenic 15.0%
!! AATTTAAGAACAATTATGAA+TGG + chr6_3:41360521-41360540 Msa0951330:intron 15.0%
!! ATTTAAGAACAATTATGAAT+GGG + chr6_3:41360522-41360541 Msa0951330:intron 15.0%
!! AATGATACTAAATTATGAAA+GGG + chr6_3:41360546-41360565 Msa0951330:intron 15.0%
!!! TTAAATTATTTAGAGGTGTT+GGG + chr6_3:41357241-41357260 Msa0951330:intron 20.0%
!!! AAAGGTATAAGAATAAGTTA+CGG - chr6_3:41357863-41357882 None:intergenic 20.0%
!!! TGTTTATCAATAGAAAGTAT+TGG + chr6_3:41358097-41358116 Msa0951330:intron 20.0%
!! TTGAAAGACTAAATATATGA+TGG + chr6_3:41358140-41358159 Msa0951330:intron 20.0%
!! TGATTGTGAAATTGTTTATT+AGG + chr6_3:41358207-41358226 Msa0951330:intron 20.0%
!! GATTGTGAAATTGTTTATTA+GGG + chr6_3:41358208-41358227 Msa0951330:intron 20.0%
!! ACAGCTACTTAAAAAAAAAA+AGG - chr6_3:41358304-41358323 None:intergenic 20.0%
!!! TAGTAAAAGCAAATTTTGTT+GGG - chr6_3:41358589-41358608 None:intergenic 20.0%
!!! ATATAAAGAATTTGAAGCTT+GGG - chr6_3:41359382-41359401 None:intergenic 20.0%
!!! AATATAAAGAATTTGAAGCT+TGG - chr6_3:41359383-41359402 None:intergenic 20.0%
!! AACATCCAACTTAAAAAATT+GGG + chr6_3:41359599-41359618 Msa0951330:CDS 20.0%
!! ATATGACTATCAACTTTAAT+GGG + chr6_3:41359676-41359695 Msa0951330:CDS 20.0%
!! TATTAGAAATATAAACGCTA+CGG - chr6_3:41359819-41359838 None:intergenic 20.0%
!! CTTACATATGATATTATCTA+TGG - chr6_3:41359951-41359970 None:intergenic 20.0%
!!! CATTATGAAATGAAAGTTTT+AGG - chr6_3:41360390-41360409 None:intergenic 20.0%
!! CTAAAACTTTCATTTCATAA+TGG + chr6_3:41360388-41360407 Msa0951330:intron 20.0%
!! GAATCATAAAAAGAAAAATC+GGG + chr6_3:41360437-41360456 Msa0951330:intron 20.0%
!!! TGAACTTATGTTTTTTTTAG+GGG - chr6_3:41360485-41360504 None:intergenic 20.0%
!! TTTAAGAACAATTATGAATG+GGG + chr6_3:41360523-41360542 Msa0951330:intron 20.0%
!! GAATGATACTAAATTATGAA+AGG + chr6_3:41360545-41360564 Msa0951330:intron 20.0%
!! AAATTATCTTGATTCTGTTA+TGG + chr6_3:41360869-41360888 Msa0951330:CDS 20.0%
! AAAATACATTCATGCTTCAT+TGG - chr6_3:41356963-41356982 None:intergenic 25.0%
!! AATGAAGCATGAATGTATTT+TGG + chr6_3:41356962-41356981 Msa0951330:CDS 25.0%
! ATAATATACCTTGAATGGTA+TGG - chr6_3:41357091-41357110 None:intergenic 25.0%
! AGCATATAATATACCTTGAA+TGG - chr6_3:41357096-41357115 None:intergenic 25.0%
!!! CATCATTTTAGGGTTTAATT+TGG + chr6_3:41357138-41357157 Msa0951330:intron 25.0%
!! CTTAAATTATTTAGAGGTGT+TGG + chr6_3:41357240-41357259 Msa0951330:intron 25.0%
!!! TAAATTATTTAGAGGTGTTG+GGG + chr6_3:41357242-41357261 Msa0951330:intron 25.0%
!! TTTCTCTTGTTTCTCTTTAA+AGG + chr6_3:41358025-41358044 Msa0951330:intron 25.0%
!! GTAGTAAAAGCAAATTTTGT+TGG - chr6_3:41358590-41358609 None:intergenic 25.0%
!!! TTTGAAGCGAAATTTTTTCA+GGG - chr6_3:41358768-41358787 None:intergenic 25.0%
!!! GTTTTGGAGATGAAAATAAT+GGG - chr6_3:41358983-41359002 None:intergenic 25.0%
!!! TGTTTTGGAGATGAAAATAA+TGG - chr6_3:41358984-41359003 None:intergenic 25.0%
!!! CTTTAAGATGCAAATATTCT+AGG - chr6_3:41359150-41359169 None:intergenic 25.0%
! CTAGAATATTTGCATCTTAA+AGG + chr6_3:41359148-41359167 Msa0951330:CDS 25.0%
!! ATGACTTTGAAAAAATCATC+TGG - chr6_3:41359271-41359290 None:intergenic 25.0%
!! TATAAAGAATTTGAAGCTTG+GGG - chr6_3:41359381-41359400 None:intergenic 25.0%
! CAACATCCAACTTAAAAAAT+TGG + chr6_3:41359598-41359617 Msa0951330:CDS 25.0%
!!! ATTTGCCCAATTTTTTAAGT+TGG - chr6_3:41359607-41359626 None:intergenic 25.0%
!! GTTATGTGCAATATATTTTG+TGG + chr6_3:41359634-41359653 Msa0951330:CDS 25.0%
!! AATATATTTTGTGGAATGCA+AGG + chr6_3:41359643-41359662 Msa0951330:CDS 25.0%
! GATATGACTATCAACTTTAA+TGG + chr6_3:41359675-41359694 Msa0951330:CDS 25.0%
! TATGACTATCAACTTTAATG+GGG + chr6_3:41359677-41359696 Msa0951330:CDS 25.0%
! AAAGGTTTATAAGTGATTGT+AGG - chr6_3:41359844-41359863 None:intergenic 25.0%
! TCTTATCTTCTATTCTAATG+TGG + chr6_3:41359871-41359890 Msa0951330:intron 25.0%
! CTTATCTTCTATTCTAATGT+GGG + chr6_3:41359872-41359891 Msa0951330:intron 25.0%
! TTATCTTCTATTCTAATGTG+GGG + chr6_3:41359873-41359892 Msa0951330:intron 25.0%
! TGACGATGATGATAAAAAAA+GGG - chr6_3:41359991-41360010 None:intergenic 25.0%
! ATGACGATGATGATAAAAAA+AGG - chr6_3:41359992-41360011 None:intergenic 25.0%
! CAGTTTCTCAATTAATGAAA+TGG - chr6_3:41360035-41360054 None:intergenic 25.0%
!!! TATAGTTGATAGCTAATAAC+TGG + chr6_3:41360220-41360239 Msa0951330:intron 25.0%
! GCTAAATTTAACCTTTCAAA+TGG + chr6_3:41360286-41360305 Msa0951330:intron 25.0%
! ATTTATTGCTTTAATTCCGA+AGG + chr6_3:41360581-41360600 Msa0951330:intron 25.0%
!!! AAAAAAGTTGCTTTTGTTCA+AGG + chr6_3:41360812-41360831 Msa0951330:CDS 25.0%
! AAGAATAAAAACGGAGATAA+AGG - chr6_3:41361026-41361045 None:intergenic 25.0%
! AAGAATATTAAATCCTTCTG+CGG - chr6_3:41361054-41361073 None:intergenic 25.0%
!!! AATGTATTTTGGCAGAACAA+AGG + chr6_3:41356973-41356992 Msa0951330:CDS 30.0%
ATGCTGAGAATTTAACAAGA+TGG + chr6_3:41357015-41357034 Msa0951330:CDS 30.0%
TGCTGAGAATTTAACAAGAT+GGG + chr6_3:41357016-41357035 Msa0951330:CDS 30.0%
!!! CATTTTAGGGTTTAATTTGG+TGG + chr6_3:41357141-41357160 Msa0951330:intron 30.0%
TTACATAATTCAGTGTGTGT+CGG - chr6_3:41357216-41357235 None:intergenic 30.0%
! TTTTGTATTGCCTCTAATGA+TGG + chr6_3:41357396-41357415 Msa0951330:intron 30.0%
TTTGTATTGCCTCTAATGAT+GGG + chr6_3:41357397-41357416 Msa0951330:intron 30.0%
TAACAAAAACCCATCATTAG+AGG - chr6_3:41357409-41357428 None:intergenic 30.0%
ATATATACTACCTTAGCATG+AGG - chr6_3:41357686-41357705 None:intergenic 30.0%
!!! CTCTTTACTTTGTTTTTCGT+AGG + chr6_3:41357764-41357783 Msa0951330:intron 30.0%
TTGCTCATGAACCTTAAAAA+AGG - chr6_3:41357881-41357900 None:intergenic 30.0%
TTGCTCATGAACCTTAAAAA+AGG - chr6_3:41357881-41357900 None:intergenic 30.0%
AAGCCATGATTAACAATTTC+CGG - chr6_3:41357951-41357970 None:intergenic 30.0%
GAAATTGTTAATCATGGCTT+AGG + chr6_3:41357951-41357970 Msa0951330:CDS 30.0%
! TCACTTTGTTTGATGTTAAC+AGG + chr6_3:41358454-41358473 Msa0951330:intron 30.0%
!!! AGTCTTTGAAGTTTTTATCG+TGG - chr6_3:41358670-41358689 None:intergenic 30.0%
!!! TTGAAGCGAAATTTTTTCAG+GGG - chr6_3:41358767-41358786 None:intergenic 30.0%
!!! GTTTGAAGCGAAATTTTTTC+AGG - chr6_3:41358769-41358788 None:intergenic 30.0%
! TTTTGCGAGAAATCAGATTA+CGG - chr6_3:41358811-41358830 None:intergenic 30.0%
ATATCCACATTATCAACACA+TGG + chr6_3:41358891-41358910 Msa0951330:CDS 30.0%
! TTTGAGAACAGTTAGTGTTT+TGG - chr6_3:41358999-41359018 None:intergenic 30.0%
AGATGCAAATATTCTAGGTT+AGG - chr6_3:41359145-41359164 None:intergenic 30.0%
CAATCTAACCAACTTAGAAA+GGG - chr6_3:41359236-41359255 None:intergenic 30.0%
ACAATCTAACCAACTTAGAA+AGG - chr6_3:41359237-41359256 None:intergenic 30.0%
! AAGTTGGTTAGATTGTGTAT+CGG + chr6_3:41359241-41359260 Msa0951330:CDS 30.0%
TTTCATCCCTTTAACAGTAT+TGG + chr6_3:41359493-41359512 Msa0951330:intron 30.0%
TCAAATGAAAGTTTACATCG+TGG - chr6_3:41359774-41359793 None:intergenic 30.0%
AGAAGATAAGACATGAACAA+AGG - chr6_3:41359862-41359881 None:intergenic 30.0%
GACGATGATGATAAAAAAAG+GGG - chr6_3:41359990-41360009 None:intergenic 30.0%
ACTCTTAATCATCATATTGC+AGG + chr6_3:41360092-41360111 Msa0951330:intron 30.0%
ATATTGCAGGAAACTATGAT+AGG + chr6_3:41360105-41360124 Msa0951330:intron 30.0%
ACATTAACTAAGGTTTCGTT+TGG + chr6_3:41360157-41360176 Msa0951330:intron 30.0%
AGCAAACATTTCTACTTCAA+TGG - chr6_3:41360269-41360288 None:intergenic 30.0%
TCGATTATCTACCATTTGAA+AGG - chr6_3:41360300-41360319 None:intergenic 30.0%
AACATAAGTTCAAAACCTCA+CGG + chr6_3:41360493-41360512 Msa0951330:intron 30.0%
TTCTTAAATTTAATCCCGTG+AGG - chr6_3:41360511-41360530 None:intergenic 30.0%
ATACATCCCACTAATGAAAT+AGG - chr6_3:41360639-41360658 None:intergenic 30.0%
ATTAGTGGGATGTATGTATA+AGG + chr6_3:41360644-41360663 Msa0951330:CDS 30.0%
TGTAAAAGGGAAACAAATCT+TGG + chr6_3:41360740-41360759 Msa0951330:CDS 30.0%
!! GTTCAAGGTAGATTTTGAAA+AGG + chr6_3:41360827-41360846 Msa0951330:CDS 30.0%
AGAATATTAAATCCTTCTGC+GGG - chr6_3:41361053-41361072 None:intergenic 30.0%
TCGAATTTGAATTTCCTCAG+TGG - chr6_3:41356936-41356955 None:intergenic 35.0%
TTAAATTCTCAGCATCACGA+GGG - chr6_3:41357010-41357029 None:intergenic 35.0%
GCTGAGAATTTAACAAGATG+GGG + chr6_3:41357017-41357036 Msa0951330:CDS 35.0%
TGAATGGTATGGAATGAATC+AGG - chr6_3:41357080-41357099 None:intergenic 35.0%
GATTCATTCCATACCATTCA+AGG + chr6_3:41357080-41357099 Msa0951330:CDS 35.0%
CTTTCTGTACATAGCATTAG+TGG - chr6_3:41357311-41357330 None:intergenic 35.0%
TTCAGTCTCTATTTCAAAGC+TGG + chr6_3:41357469-41357488 Msa0951330:intron 35.0%
TGATATTTGGTAAGCTGGAT+TGG - chr6_3:41357654-41357673 None:intergenic 35.0%
TCCAGCTTACCAAATATCAT+TGG + chr6_3:41357655-41357674 Msa0951330:CDS 35.0%
TCCAATGATATTTGGTAAGC+TGG - chr6_3:41357659-41357678 None:intergenic 35.0%
CAAGAAAGAATGCATAAGTG+TGG - chr6_3:41357802-41357821 None:intergenic 35.0%
CATCCGGAAATTGTTAATCA+TGG + chr6_3:41357945-41357964 Msa0951330:CDS 35.0%
! TTTCTCTTTAAAGGCTCTAG+AGG + chr6_3:41358034-41358053 Msa0951330:intron 35.0%
! TGAAGTTTTTATCGTGGAAG+CGG - chr6_3:41358664-41358683 None:intergenic 35.0%
TATCCACAACATCAACACAT+CGG + chr6_3:41358835-41358854 Msa0951330:CDS 35.0%
TAATGTGGATATCTTTCTCG+CGG - chr6_3:41358883-41358902 None:intergenic 35.0%
!! GATGAAAATAATGGGCTTCA+AGG - chr6_3:41358975-41358994 None:intergenic 35.0%
! ATCGCGTTCGATTTGAAAAT+CGG + chr6_3:41359089-41359108 Msa0951330:CDS 35.0%
!! TCTTAAAGGTACCTATTGTC+TGG + chr6_3:41359162-41359181 Msa0951330:CDS 35.0%
TTTGTCAAGTTCCAGACAAT+AGG - chr6_3:41359176-41359195 None:intergenic 35.0%
AGTTGGTTAGATTGTGTATC+GGG + chr6_3:41359242-41359261 Msa0951330:CDS 35.0%
CACATTCAAGAATCGAAGAT+GGG - chr6_3:41359548-41359567 None:intergenic 35.0%
ACACATTCAAGAATCGAAGA+TGG - chr6_3:41359549-41359568 None:intergenic 35.0%
TTTAATGGGGTTCCTTCTAA+TGG + chr6_3:41359690-41359709 Msa0951330:intron 35.0%
! TCCTTCTAATGGAATGCTTT+TGG + chr6_3:41359701-41359720 Msa0951330:intron 35.0%
!! TCCAAAAGCATTCCATTAGA+AGG - chr6_3:41359705-41359724 None:intergenic 35.0%
TTACATCGTGGTGATATCAT+TGG - chr6_3:41359762-41359781 None:intergenic 35.0%
!!! TTGATTTTTTCCGTCGTTCT+TGG + chr6_3:41359790-41359809 Msa0951330:intron 35.0%
AGTTAATGTCATGCAGGAAA+GGG - chr6_3:41360146-41360165 None:intergenic 35.0%
TAGTTAATGTCATGCAGGAA+AGG - chr6_3:41360147-41360166 None:intergenic 35.0%
TTCCTGCATGACATTAACTA+AGG + chr6_3:41360147-41360166 Msa0951330:intron 35.0%
AACCTTAGTTAATGTCATGC+AGG - chr6_3:41360152-41360171 None:intergenic 35.0%
! AATGGTGATAATGTGCGTAA+AGG + chr6_3:41360406-41360425 Msa0951330:intron 35.0%
ATCGGGTGATTAACATAAGT+TGG + chr6_3:41360454-41360473 Msa0951330:intron 35.0%
ACATAAGTTCAAAACCTCAC+GGG + chr6_3:41360494-41360513 Msa0951330:intron 35.0%
TCTCAATCAGCGTTTGTAAA+AGG + chr6_3:41360726-41360745 Msa0951330:CDS 35.0%
CTCAATCAGCGTTTGTAAAA+GGG + chr6_3:41360727-41360746 Msa0951330:CDS 35.0%
AAAGGGAAACAAATCTTGGA+TGG + chr6_3:41360744-41360763 Msa0951330:CDS 35.0%
!!! CAACTTTTTTTTCATGCGTC+TGG - chr6_3:41360802-41360821 None:intergenic 35.0%
!! TTTTGAAAAGGCATACGACT+CGG + chr6_3:41360839-41360858 Msa0951330:CDS 35.0%
AAATGAATTTCCCAGCTCTA+TGG + chr6_3:41360895-41360914 Msa0951330:CDS 35.0%
AAATGGATATCTGAGTGTGT+GGG + chr6_3:41360921-41360940 Msa0951330:CDS 35.0%
GCGGGTAACAAGAATAAAAA+CGG - chr6_3:41361035-41361054 None:intergenic 35.0%
TATTCTTATGTCAGCAGTAG+TGG + chr6_3:41361067-41361086 Msa0951330:CDS 35.0%
ATTCTTATGTCAGCAGTAGT+GGG + chr6_3:41361068-41361087 Msa0951330:CDS 35.0%
GCGAAAATGTTTAATGGCTT+TGG + chr6_3:41361092-41361111 Msa0951330:CDS 35.0%
!! ATGTTTAATGGCTTTGGTGT+AGG + chr6_3:41361098-41361117 Msa0951330:CDS 35.0%
!! TTCAGTTGGTGATGTTAAAC+AGG + chr6_3:41361121-41361140 Msa0951330:CDS 35.0%
!! TCAGTTGGTGATGTTAAACA+GGG + chr6_3:41361122-41361141 Msa0951330:CDS 35.0%
GTTAAATTCTCAGCATCACG+AGG - chr6_3:41357011-41357030 None:intergenic 40.0%
! AATTTGGTGGCTATGATGCA+CGG + chr6_3:41357154-41357173 Msa0951330:intron 40.0%
AAACAGTGATGCTAGCAATC+AGG - chr6_3:41357358-41357377 None:intergenic 40.0%
AGTCTCTATTTCAAAGCTGG+AGG + chr6_3:41357472-41357491 Msa0951330:intron 40.0%
! ACTTCAAACGAGCTTTTCGT+CGG + chr6_3:41357621-41357640 Msa0951330:CDS 40.0%
! ATTTGGTAAGCTGGATTGGA+GGG - chr6_3:41357650-41357669 None:intergenic 40.0%
! TATTTGGTAAGCTGGATTGG+AGG - chr6_3:41357651-41357670 None:intergenic 40.0%
GAGGCAGTTCCAATGATATT+TGG - chr6_3:41357667-41357686 None:intergenic 40.0%
ATGCATAAGTGTGGAGAACT+CGG - chr6_3:41357793-41357812 None:intergenic 40.0%
TAAGGTTCATGAGCAACATC+CGG + chr6_3:41357885-41357904 Msa0951330:intron 40.0%
GCTTAGGTCAGCAATCAAAA+GGG + chr6_3:41357967-41357986 Msa0951330:CDS 40.0%
!! AGGGTCTTGTTCTTCTACAA+AGG + chr6_3:41357986-41358005 Msa0951330:CDS 40.0%
ATGCGACACAATAACTCATC+TGG - chr6_3:41358554-41358573 None:intergenic 40.0%
CTACAACCCTTCTTTCTAAG+CGG + chr6_3:41358606-41358625 Msa0951330:CDS 40.0%
AAAGCTATCGAAGCGATCAT+AGG - chr6_3:41358699-41358718 None:intergenic 40.0%
TTGAAAGAGGATGGATCATG+AGG - chr6_3:41358730-41358749 None:intergenic 40.0%
CCTGGTTAATTGAAAGAGGA+TGG - chr6_3:41358739-41358758 None:intergenic 40.0%
CCATCCTCTTTCAATTAACC+AGG + chr6_3:41358736-41358755 Msa0951330:CDS 40.0%
TGAGCCTGGTTAATTGAAAG+AGG - chr6_3:41358743-41358762 None:intergenic 40.0%
AATGTGGATATCTTTCTCGC+GGG - chr6_3:41358882-41358901 None:intergenic 40.0%
!! CTAGCCATGTGTTGATAATG+TGG - chr6_3:41358898-41358917 None:intergenic 40.0%
AGGTGTGTCTATACAACTTG+AGG - chr6_3:41358955-41358974 None:intergenic 40.0%
AACTTCAGGGATTTCAGAGA+TGG - chr6_3:41359067-41359086 None:intergenic 40.0%
ATCTTTGGCCCTTTCTAAGT+TGG + chr6_3:41359225-41359244 Msa0951330:CDS 40.0%
! CATCCCTTTAACAGTATTGG+AGG + chr6_3:41359496-41359515 Msa0951330:intron 40.0%
GGTCCTCCAATACTGTTAAA+GGG - chr6_3:41359502-41359521 None:intergenic 40.0%
TGGTCCTCCAATACTGTTAA+AGG - chr6_3:41359503-41359522 None:intergenic 40.0%
! TTTCCATTCCTCTGATGATG+TGG - chr6_3:41359523-41359542 None:intergenic 40.0%
TGGTGATATCATTGGACAAG+AGG - chr6_3:41359754-41359773 None:intergenic 40.0%
CAACACAGACACGAATTTGT+TGG - chr6_3:41360061-41360080 None:intergenic 40.0%
!!! TCGTGTCTGTGTTGTTGTTT+TGG + chr6_3:41360067-41360086 Msa0951330:intron 40.0%
! CTTTTATAATATCGGCGCGA+TGG - chr6_3:41360361-41360380 None:intergenic 40.0%
TTTCCGGCCTATTTCATTAG+TGG + chr6_3:41360629-41360648 Msa0951330:CDS 40.0%
TTCCGGCCTATTTCATTAGT+GGG + chr6_3:41360630-41360649 Msa0951330:CDS 40.0%
ATCCCACTAATGAAATAGGC+CGG - chr6_3:41360635-41360654 None:intergenic 40.0%
! TATGTATAAGGTGCTTGCGA+AGG + chr6_3:41360656-41360675 Msa0951330:CDS 40.0%
GACAACTTTACGCAACCTAT+TGG - chr6_3:41360688-41360707 None:intergenic 40.0%
! TGCAAATGAAGCACTAGATG+AGG + chr6_3:41360776-41360795 Msa0951330:CDS 40.0%
GAAATGGATATCTGAGTGTG+TGG + chr6_3:41360920-41360939 Msa0951330:CDS 40.0%
!! ACGGCTTCGGTTTTAGTAAA+TGG + chr6_3:41360951-41360970 Msa0951330:CDS 40.0%
!! CGGCTTCGGTTTTAGTAAAT+GGG + chr6_3:41360952-41360971 Msa0951330:CDS 40.0%
CAATAGGGAACTCATCTGTT+GGG - chr6_3:41360980-41360999 None:intergenic 40.0%
TCAATAGGGAACTCATCTGT+TGG - chr6_3:41360981-41361000 None:intergenic 40.0%
AGATGAGTTCCCTATTGAGA+GGG + chr6_3:41360983-41361002 Msa0951330:CDS 40.0%
TTATTCTTGTTACCCGCAGA+AGG + chr6_3:41361038-41361057 Msa0951330:CDS 40.0%
TTCTTATGTCAGCAGTAGTG+GGG + chr6_3:41361069-41361088 Msa0951330:CDS 40.0%
AATTCAGTGTGTGTCGGACA+CGG - chr6_3:41357210-41357229 None:intergenic 45.0%
ATGAAGCATGGATGCGGATA+CGG - chr6_3:41357277-41357296 None:intergenic 45.0%
TGAGCTATGAAGCATGGATG+CGG - chr6_3:41357283-41357302 None:intergenic 45.0%
CTCTATTTCAAAGCTGGAGG+AGG + chr6_3:41357475-41357494 Msa0951330:CDS 45.0%
! CTTCAAACGAGCTTTTCGTC+GGG + chr6_3:41357622-41357641 Msa0951330:CDS 45.0%
ATTGGAACTGCCTCATGCTA+AGG + chr6_3:41357673-41357692 Msa0951330:CDS 45.0%
TAGCTACTAGCTAGCATGAC+AGG - chr6_3:41357737-41357756 None:intergenic 45.0%
GGCTTAGGTCAGCAATCAAA+AGG + chr6_3:41357966-41357985 Msa0951330:CDS 45.0%
CGAACCATTACTTCCTTCTC+TGG + chr6_3:41358493-41358512 Msa0951330:CDS 45.0%
GAGTCCAGAGAAGGAAGTAA+TGG - chr6_3:41358500-41358519 None:intergenic 45.0%
GGGAAGTGAATAGAAGAGTG+GGG - chr6_3:41358636-41358655 None:intergenic 45.0%
CGGGAAGTGAATAGAAGAGT+GGG - chr6_3:41358637-41358656 None:intergenic 45.0%
ACGGGAAGTGAATAGAAGAG+TGG - chr6_3:41358638-41358657 None:intergenic 45.0%
TTTATCGTGGAAGCGGAGAA+CGG - chr6_3:41358657-41358676 None:intergenic 45.0%
!!! ATTTTTTCAGGGGATGAGCC+TGG - chr6_3:41358757-41358776 None:intergenic 45.0%
TGCGAGAAATCAGATTACGG+CGG - chr6_3:41358808-41358827 None:intergenic 45.0%
! CTACCGATGTGTTGATGTTG+TGG - chr6_3:41358841-41358860 None:intergenic 45.0%
ATGTGGATATCTTTCTCGCG+GGG - chr6_3:41358881-41358900 None:intergenic 45.0%
TCGAACGCGATTCAACTTCA+GGG - chr6_3:41359080-41359099 None:intergenic 45.0%
ATCGAACGCGATTCAACTTC+AGG - chr6_3:41359081-41359100 None:intergenic 45.0%
GTTAAGCCCTCGTCATTGTT+GGG + chr6_3:41359327-41359346 Msa0951330:CDS 45.0%
CATCATCCCAACAATGACGA+GGG - chr6_3:41359336-41359355 None:intergenic 45.0%
ACATCATCCCAACAATGACG+AGG - chr6_3:41359337-41359356 None:intergenic 45.0%
! TTTGAAGCTTGGGGCAAAGT+CGG - chr6_3:41359372-41359391 None:intergenic 45.0%
!! CACAGACACGAATTTGTTGG+TGG - chr6_3:41360058-41360077 None:intergenic 45.0%
CTTTACGCAACCTATTGGCA+AGG - chr6_3:41360683-41360702 None:intergenic 45.0%
TGAATTTCCCAGCTCTATGG+CGG + chr6_3:41360898-41360917 Msa0951330:CDS 45.0%
GATATCTGAGTGTGTGGGAA+CGG + chr6_3:41360926-41360945 Msa0951330:CDS 45.0%
CAGATGAGTTCCCTATTGAG+AGG + chr6_3:41360982-41361001 Msa0951330:CDS 45.0%
GATGAGTTCCCTATTGAGAG+GGG + chr6_3:41360984-41361003 Msa0951330:CDS 45.0%
TCTTATGTCAGCAGTAGTGG+GGG + chr6_3:41361070-41361089 Msa0951330:CDS 45.0%
GTGGGGGCGAAAATGTTTAA+TGG + chr6_3:41361086-41361105 Msa0951330:CDS 45.0%
!! AATAACATTTAAAAAATATA+TGG - chr6_3:41359474-41359493 None:intergenic 5.0%
ACTGGGATACGCCTAATCTG+AGG - chr6_3:41357185-41357204 None:intergenic 50.0%
TGAAGCATGGATGCGGATAC+GGG - chr6_3:41357276-41357295 None:intergenic 50.0%
GTCGACTGAGCTATGAAGCA+TGG - chr6_3:41357289-41357308 None:intergenic 50.0%
!! AGCTGGAGGAGGCTTTTTCT+CGG + chr6_3:41357486-41357505 Msa0951330:CDS 50.0%
!! CAAGGAGTATCGGGGTTGTT+GGG - chr6_3:41357515-41357534 None:intergenic 50.0%
! TCCTAGGAGCCAAGGAGTAT+CGG - chr6_3:41357525-41357544 None:intergenic 50.0%
TACTCCTTGGCTCCTAGGAA+TGG + chr6_3:41357526-41357545 Msa0951330:CDS 50.0%
GCATAGTGTGAGCCATTCCT+AGG - chr6_3:41357541-41357560 None:intergenic 50.0%
AGGAATGGCTCACACTATGC+AGG + chr6_3:41357541-41357560 Msa0951330:CDS 50.0%
ACTGTTGTCGAGTCCAGAGA+AGG - chr6_3:41358509-41358528 None:intergenic 50.0%
TCTGGACTCGACAACAGTTG+TGG + chr6_3:41358511-41358530 Msa0951330:CDS 50.0%
CAACCCTTCTTTCTAAGCGG+TGG + chr6_3:41358609-41358628 Msa0951330:CDS 50.0%
GGTCCACCGCTTAGAAAGAA+GGG - chr6_3:41358615-41358634 None:intergenic 50.0%
TTATCGTGGAAGCGGAGAAC+GGG - chr6_3:41358656-41358675 None:intergenic 50.0%
AAATCAGATTACGGCGGTGG+CGG - chr6_3:41358802-41358821 None:intergenic 50.0%
GAGAAATCAGATTACGGCGG+TGG - chr6_3:41358805-41358824 None:intergenic 50.0%
CGCAATACAACGTCGTGTTG+AGG + chr6_3:41358922-41358941 Msa0951330:CDS 50.0%
GGTTAAGCCCTCGTCATTGT+TGG + chr6_3:41359326-41359345 Msa0951330:CDS 50.0%
TTGGAGGACCACATCATCAG+AGG + chr6_3:41359512-41359531 Msa0951330:CDS 50.0%
GGACCACATCATCAGAGGAA+TGG + chr6_3:41359517-41359536 Msa0951330:CDS 50.0%
GCTACGGATACCAAGAACGA+CGG - chr6_3:41359803-41359822 None:intergenic 50.0%
! GTCATGCAGGAAAGGGTGTA+GGG - chr6_3:41360139-41360158 None:intergenic 50.0%
! TGTCATGCAGGAAAGGGTGT+AGG - chr6_3:41360140-41360159 None:intergenic 50.0%
! CTCTGCGGACTATTCACCTT+CGG - chr6_3:41360600-41360619 None:intergenic 50.0%
CGGAAATCATTGAGCCTCTG+CGG - chr6_3:41360615-41360634 None:intergenic 50.0%
CGCAGAGGCTCAATGATTTC+CGG + chr6_3:41360613-41360632 Msa0951330:CDS 50.0%
TTGCGAAGGTCCTTGCCAAT+AGG + chr6_3:41360670-41360689 Msa0951330:CDS 50.0%
! TGAAAAGGCATACGACTCGG+TGG + chr6_3:41360842-41360861 Msa0951330:CDS 50.0%
TCCATTTCCGCCATAGAGCT+GGG - chr6_3:41360908-41360927 None:intergenic 50.0%
ATCCATTTCCGCCATAGAGC+TGG - chr6_3:41360909-41360928 None:intergenic 50.0%
GAGATAAAGGATCACCCTGC+CGG - chr6_3:41361013-41361032 None:intergenic 50.0%
! GGCTTTGGTGTAGGTTCAGT+TGG + chr6_3:41361107-41361126 Msa0951330:CDS 50.0%
GCACGGACACTCCTCAGATT+AGG + chr6_3:41357171-41357190 Msa0951330:intron 55.0%
GAAGCATGGATGCGGATACG+GGG - chr6_3:41357275-41357294 None:intergenic 55.0%
!! GCTGGAGGAGGCTTTTTCTC+GGG + chr6_3:41357487-41357506 Msa0951330:CDS 55.0%
!! CCAAGGAGTATCGGGGTTGT+TGG - chr6_3:41357516-41357535 None:intergenic 55.0%
CCAACAACCCCGATACTCCT+TGG + chr6_3:41357513-41357532 Msa0951330:CDS 55.0%
!! CTAGGAGCCAAGGAGTATCG+GGG - chr6_3:41357523-41357542 None:intergenic 55.0%
!! CCTAGGAGCCAAGGAGTATC+GGG - chr6_3:41357524-41357543 None:intergenic 55.0%
TGAGCCATTCCTAGGAGCCA+AGG - chr6_3:41357533-41357552 None:intergenic 55.0%
TTTAGCGTCGTGCGAGTCTG+GGG - chr6_3:41357576-41357595 None:intergenic 55.0%
GTTTAGCGTCGTGCGAGTCT+GGG - chr6_3:41357577-41357596 None:intergenic 55.0%
AGTTTAGCGTCGTGCGAGTC+TGG - chr6_3:41357578-41357597 None:intergenic 55.0%
!! AATGGTTCGAGAGAGCGTCG+TGG - chr6_3:41358482-41358501 None:intergenic 55.0%
GGGTCCACCGCTTAGAAAGA+AGG - chr6_3:41358616-41358635 None:intergenic 55.0%
!! GGAAAGGGTGTAGGGTGTTG+AGG - chr6_3:41360131-41360150 None:intergenic 55.0%
CGAAGGTGAATAGTCCGCAG+AGG + chr6_3:41360598-41360617 Msa0951330:intron 55.0%
! TCCCAGCTCTATGGCGGAAA+TGG + chr6_3:41360904-41360923 Msa0951330:CDS 55.0%
TGAGTGTGTGGGAACGGCAA+CGG + chr6_3:41360932-41360951 Msa0951330:CDS 55.0%
TCCCTATTGAGAGGGGTCTC+CGG + chr6_3:41360991-41361010 Msa0951330:CDS 55.0%
GTGTGTCGGACACGGACACT+GGG - chr6_3:41357202-41357221 None:intergenic 60.0%
TGTGTGTCGGACACGGACAC+TGG - chr6_3:41357203-41357222 None:intergenic 60.0%
CCCGATACTCCTTGGCTCCT+AGG + chr6_3:41357521-41357540 Msa0951330:CDS 60.0%
TGTGGGAACGGCAACGGCTT+CGG + chr6_3:41360938-41360957 Msa0951330:CDS 60.0%
GCCGGAGACCCCTCTCAATA+GGG - chr6_3:41360995-41361014 None:intergenic 60.0%
TGCCGGAGACCCCTCTCAAT+AGG - chr6_3:41360996-41361015 None:intergenic 60.0%
TATTGAGAGGGGTCTCCGGC+AGG + chr6_3:41360995-41361014 Msa0951330:CDS 60.0%
ATTGAGAGGGGTCTCCGGCA+GGG + chr6_3:41360996-41361015 Msa0951330:CDS 60.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 41356924 41361154 41356924 ID=Msa0951330;Name=Msa0951330
chr6_3 mRNA 41356924 41361154 41356924 ID=Msa0951330-mRNA-1;Parent=Msa0951330;Name=Msa0951330-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|0.83|1|1|6|0|715
chr6_3 exon 41356924 41357101 41356924 ID=Msa0951330-mRNA-1:exon:9846;Parent=Msa0951330-mRNA-1
chr6_3 exon 41357474 41357694 41357474 ID=Msa0951330-mRNA-1:exon:9847;Parent=Msa0951330-mRNA-1
chr6_3 exon 41357933 41358007 41357933 ID=Msa0951330-mRNA-1:exon:9848;Parent=Msa0951330-mRNA-1
chr6_3 exon 41358476 41359408 41358476 ID=Msa0951330-mRNA-1:exon:9849;Parent=Msa0951330-mRNA-1
chr6_3 exon 41359510 41359698 41359510 ID=Msa0951330-mRNA-1:exon:9850;Parent=Msa0951330-mRNA-1
chr6_3 exon 41360603 41361154 41360603 ID=Msa0951330-mRNA-1:exon:9851;Parent=Msa0951330-mRNA-1
chr6_3 CDS 41356924 41357101 41356924 ID=Msa0951330-mRNA-1:cds;Parent=Msa0951330-mRNA-1
chr6_3 CDS 41357474 41357694 41357474 ID=Msa0951330-mRNA-1:cds;Parent=Msa0951330-mRNA-1
chr6_3 CDS 41357933 41358007 41357933 ID=Msa0951330-mRNA-1:cds;Parent=Msa0951330-mRNA-1
chr6_3 CDS 41358476 41359408 41358476 ID=Msa0951330-mRNA-1:cds;Parent=Msa0951330-mRNA-1
chr6_3 CDS 41359510 41359698 41359510 ID=Msa0951330-mRNA-1:cds;Parent=Msa0951330-mRNA-1
chr6_3 CDS 41360603 41361154 41360603 ID=Msa0951330-mRNA-1:cds;Parent=Msa0951330-mRNA-1
Gene Sequence

>Msa0951330

ATGGATTATCCACTGAGGAAATTCAAATTCGATTTACCAATGAAGCATGAATGTATTTTGGCAGAACAAAGGTACAACAAAAACCCTCGTGATGCTGAGAATTTAACAAGATGGGGTGTTGCTTTGTTACGATTATCTCAGTCTCAATCTTTTCCTGATTCATTCCATACCATTCAAGTCTCTATTTCAAAGCTGGAGGAGGCTTTTTCTCGGGATCCCAACAACCCCGATACTCCTTGGCTCCTAGGAATGGCTCACACTATGCAGGCACTTTTAACCCCAGACTCGCACGACGCTAAACTTCACTCTGACAGTGCAGCTGTTTACTTCAAACGAGCTTTTCGTCGGGATCCCTCCAATCCAGCTTACCAAATATCATTGGAACTGCCTCATGCTAAGGTTCATGAGCAACATCCGGAAATTGTTAATCATGGCTTAGGTCAGCAATCAAAAGGGTCTTGTTCTTCTACAAAGGTGCCACGACGCTCTCTCGAACCATTACTTCCTTCTCTGGACTCGACAACAGTTGTGGATAGAATCAGCGAATTACCAGATGAGTTATTGTGTCGCATACTCTCTTTTCTCCCAACAAAATTTGCTTTTACTACAACCCTTCTTTCTAAGCGGTGGACCCCACTCTTCTATTCACTTCCCGTTCTCCGCTTCCACGATAAAAACTTCAAAGACTTTCAAACCTATGATCGCTTCGATAGCTTTCTTGATAACCTCATGATCCATCCTCTTTCAATTAACCAGGCTCATCCCCTGAAAAAATTTCGCTTCAAACAATGTTATTACCGCCACCGCCGTAATCTGATTTCTCGCAAAAAAGATATCCACAACATCAACACATCGGTAGTAGTCGCAAGACAAATTCCCCGCGAGAAAGATATCCACATTATCAACACATGGCTAGAAGTCGCAATACAACGTCGTGTTGAGGAGTTTGACCTCAAGTTGTATAGACACACCTTGAAGCCCATTATTTTCATCTCCAAAACACTAACTGTTCTCAAACTTTCGAGTATAATATTTAGAAATGATACTTCGTGTGTTAATCTTCCATCTCTGAAATCCCTGAAGTTGAATCGCGTTCGATTTGAAAATCGGAACGATTACATAAACTTTCTTTCTTCTTGTCCTAACCTAGAATATTTGCATCTTAAAGGTACCTATTGTCTGGAACTTGACAAAAACAAAGCATCAGAAACAGTATTTAAAAAATCTTTGGCCCTTTCTAAGTTGGTTAGATTGTGTATCGGGTCTCCAGATGATTTTTTCAAAGTCATTTCAGATTTTCCAAACTTAATTCTTATTAAACTATGGTTAAGCCCTCGTCATTGTTGGGATGATGTGCTAAAACTACTCCGACTTTGCCCCAAGCTTCAAATTCTTTATATTAAAACGTATTGGAGGACCACATCATCAGAGGAATGGAAATGCCCATCTTCGATTCTTGAATGTGTTTCGTATCATCTCAAATCATGTATTATTTCAACATCCAACTTAAAAAATTGGGCAAATGATATTCGTTATGTGCAATATATTTTGTGGAATGCAAGGCTTTTACAAGATATGACTATCAACTTTAATGGGGTGAATAGTCCGCAGAGGCTCAATGATTTCCGGCCTATTTCATTAGTGGGATGTATGTATAAGGTGCTTGCGAAGGTCCTTGCCAATAGGTTGCGTAAAGTTGTCAGCAGTGTTGTTTCTGACTCTCAATCAGCGTTTGTAAAAGGGAAACAAATCTTGGATGGTATTCTAATTGCAAATGAAGCACTAGATGAGGCCAGACGCATGAAAAAAAAGTTGCTTTTGTTCAAGGTAGATTTTGAAAAGGCATACGACTCGGTGGATTTAAATTATCTTGATTCTGTTATGGCTAAAATGAATTTCCCAGCTCTATGGCGGAAATGGATATCTGAGTGTGTGGGAACGGCAACGGCTTCGGTTTTAGTAAATGGGTGCCCAACAGATGAGTTCCCTATTGAGAGGGGTCTCCGGCAGGGTGATCCTTTATCTCCGTTTTTATTCTTGTTACCCGCAGAAGGATTTAATATTCTTATGTCAGCAGTAGTGGGGGCGAAAATGTTTAATGGCTTTGGTGTAGGTTCAGTTGGTGATGTTAAACAGGGCCGTTTCTAG
Protein sequence

>Msa0951330

MDYPLRKFKFDLPMKHECILAEQRYNKNPRDAENLTRWGVALLRLSQSQSFPDSFHTIQVSISKLEEAFSRDPNNPDTPWLLGMAHTMQALLTPDSHDAKLHSDSAAVYFKRAFRRDPSNPAYQISLELPHAKVHEQHPEIVNHGLGQQSKGSCSSTKVPRRSLEPLLPSLDSTTVVDRISELPDELLCRILSFLPTKFAFTTTLLSKRWTPLFYSLPVLRFHDKNFKDFQTYDRFDSFLDNLMIHPLSINQAHPLKKFRFKQCYYRHRRNLISRKKDIHNINTSVVVARQIPREKDIHIINTWLEVAIQRRVEEFDLKLYRHTLKPIIFISKTLTVLKLSSIIFRNDTSCVNLPSLKSLKLNRVRFENRNDYINFLSSCPNLEYLHLKGTYCLELDKNKASETVFKKSLALSKLVRLCIGSPDDFFKVISDFPNLILIKLWLSPRHCWDDVLKLLRLCPKLQILYIKTYWRTTSSEEWKCPSSILECVSYHLKSCIISTSNLKNWANDIRYVQYILWNARLLQDMTINFNGVNSPQRLNDFRPISLVGCMYKVLAKVLANRLRKVVSSVVSDSQSAFVKGKQILDGILIANEALDEARRMKKKLLLFKVDFEKAYDSVDLNYLDSVMAKMNFPALWRKWISECVGTATASVLVNGCPTDEFPIERGLRQGDPLSPFLFLLPAEGFNILMSAVVGAKMFNGFGVGSVGDVKQGRF*