Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0962360 | KEH16406.1 | 56.551 | 603 | 148 | 13 | 3 | 574 | 2 | 521 | 0.0 | 603 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0962360 | A0A072TGW1 | 56.551 | 603 | 148 | 13 | 3 | 574 | 2 | 521 | 0.0 | 603 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023610 | Msa0962360 | 0.810363 | 1.196602e-50 | -8.615850e-47 |
| Msa0068630 | Msa0962360 | 0.871606 | 6.010815e-67 | -8.615850e-47 |
| Msa0675510 | Msa0962360 | 0.846795 | 1.734687e-59 | -8.615850e-47 |
| Msa0153200 | Msa0962360 | 0.800653 | 1.302846e-48 | -8.615850e-47 |
| Msa0162580 | Msa0962360 | 0.803563 | 3.283834e-49 | -8.615850e-47 |
| Msa0280450 | Msa0962360 | 0.838893 | 2.194231e-57 | -8.615850e-47 |
| Msa0962360 | Msa1048540 | 0.817800 | 2.732747e-52 | -8.615850e-47 |
| Msa0962360 | Msa1232060 | 0.831027 | 2.106434e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0962360 | MtrunA17_Chr7g0235231 | 58.150 | 227 | 89 | 2 | 101 | 327 | 20 | 240 | 8.25e-91 | 284 |
| Msa0962360 | MtrunA17_Chr1g0178241 | 49.309 | 217 | 110 | 0 | 68 | 284 | 54 | 270 | 9.65e-69 | 235 |
| Msa0962360 | MtrunA17_Chr5g0441151 | 50.980 | 204 | 94 | 3 | 90 | 287 | 12 | 215 | 1.37e-66 | 221 |
| Msa0962360 | MtrunA17_Chr7g0271301 | 41.569 | 255 | 136 | 3 | 28 | 281 | 12 | 254 | 4.07e-65 | 216 |
| Msa0962360 | MtrunA17_Chr7g0229881 | 39.623 | 265 | 125 | 3 | 19 | 281 | 2 | 233 | 1.45e-57 | 197 |
| Msa0962360 | MtrunA17_Chr1g0171991 | 47.771 | 157 | 77 | 1 | 152 | 308 | 32 | 183 | 1.05e-40 | 153 |
| Msa0962360 | MtrunA17_Chr1g0172511 | 36.494 | 348 | 149 | 14 | 236 | 577 | 1 | 282 | 1.09e-38 | 143 |
| Msa0962360 | MtrunA17_Chr5g0439091 | 50.893 | 112 | 55 | 0 | 151 | 262 | 2 | 113 | 2.22e-34 | 126 |
| Msa0962360 | MtrunA17_Chr3g0090251 | 41.558 | 154 | 77 | 4 | 236 | 387 | 1 | 143 | 1.83e-33 | 128 |
| Msa0962360 | MtrunA17_Chr7g0229821 | 38.509 | 161 | 86 | 2 | 19 | 177 | 2 | 151 | 2.20e-27 | 107 |
| Msa0962360 | MtrunA17_Chr6g0460181 | 47.872 | 94 | 44 | 2 | 224 | 317 | 3 | 91 | 1.96e-23 | 99.8 |
| Msa0962360 | MtrunA17_Chr3g0081461 | 43.590 | 117 | 66 | 0 | 75 | 191 | 2 | 118 | 2.79e-23 | 95.1 |
| Msa0962360 | MtrunA17_Chr6g0448801 | 43.373 | 83 | 47 | 0 | 119 | 201 | 6 | 88 | 3.92e-19 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0962360 | AT2G01050.1 | 29.518 | 166 | 113 | 1 | 116 | 281 | 95 | 256 | 1.62e-15 | 80.1 |
Find 200 sgRNAs with CRISPR-Local
Find 428 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAGGTTTGGGTTCGATTA+TGG | 0.137135 | 6_3:+85586187 | Msa0962360:CDS |
| TACAGAATGGACTTGATTTA+TGG | 0.145959 | 6_3:+85587207 | Msa0962360:CDS |
| ACTTTATATGGTGTTGTTTC+CGG | 0.199482 | 6_3:-85585667 | None:intergenic |
| GGGAATTACCACAAGAATAT+TGG | 0.236955 | 6_3:+85586208 | Msa0962360:CDS |
| TGATTGGAATCATCCTTTCT+AGG | 0.245277 | 6_3:-85586489 | None:intergenic |
| TTGATCATATTCACGTATTC+TGG | 0.253449 | 6_3:-85587231 | None:intergenic |
| GGAGAAGGTGCAACTTTATA+TGG | 0.284310 | 6_3:-85585679 | None:intergenic |
| TGCCACTGATGGTGCAGATT+TGG | 0.320867 | 6_3:+85586995 | Msa0962360:CDS |
| CGGTCATTATGCCCGAGTTC+TGG | 0.325264 | 6_3:+85586311 | Msa0962360:CDS |
| TTCAGCATGACCTTGATCTT+TGG | 0.326319 | 6_3:+85587078 | Msa0962360:CDS |
| TCAGGTTTGGGTTCGATTAT+GGG | 0.332520 | 6_3:+85586188 | Msa0962360:CDS |
| GACAAACTCACACTCAGGTT+TGG | 0.345558 | 6_3:+85586175 | Msa0962360:CDS |
| GTGACTCGTAACAGACTTTA+CGG | 0.352253 | 6_3:+85586291 | Msa0962360:CDS |
| CCTTCTTCACGGACAATTAC+GGG | 0.352549 | 6_3:-85587032 | None:intergenic |
| GCAGAAGCAAACTCGTAAAA+AGG | 0.361970 | 6_3:+85587295 | Msa0962360:CDS |
| ACAAACTCACACTCAGGTTT+GGG | 0.364585 | 6_3:+85586176 | Msa0962360:CDS |
| TATTCCGGTTGTTGATGTTC+CGG | 0.366602 | 6_3:+85586797 | Msa0962360:CDS |
| CGAATGGATGGCACCGGAAG+GGG | 0.368263 | 6_3:-85585832 | None:intergenic |
| AATCCCATAACAAAATCATT+TGG | 0.369453 | 6_3:-85587369 | None:intergenic |
| TCCTTCTTCACGGACAATTA+CGG | 0.376187 | 6_3:-85587033 | None:intergenic |
| CTGATGTTCATAATGTTGAT+AGG | 0.376672 | 6_3:+85586946 | Msa0962360:CDS |
| TCAGAACTAACCGCCCTCTA+AGG | 0.378209 | 6_3:-85585924 | None:intergenic |
| GCAGGCAGAGTTCCCCTTGC+CGG | 0.378587 | 6_3:+85585648 | Msa0962360:CDS |
| GGCCTTGGAGGAGCCTGTTC+CGG | 0.383109 | 6_3:-85586589 | None:intergenic |
| ACAGAATGGACTTGATTTAT+GGG | 0.394520 | 6_3:+85587208 | Msa0962360:CDS |
| CCCATTGGCAATAGAGTATG+AGG | 0.397403 | 6_3:+85586398 | Msa0962360:CDS |
| GGTTACTCAGATTATTTGAA+TGG | 0.398745 | 6_3:+85586124 | Msa0962360:CDS |
| CGCCCCGGCAATCTCATATA+AGG | 0.398920 | 6_3:-85586241 | None:intergenic |
| AAGGACAACCCTTCCGGAAC+AGG | 0.398986 | 6_3:+85586576 | Msa0962360:CDS |
| CCCACCTACTGCGCAGCCTT+TGG | 0.403408 | 6_3:+85586620 | Msa0962360:CDS |
| TGTAAACATTGTACAAGTAT+TGG | 0.406525 | 6_3:+85586435 | Msa0962360:CDS |
| ACCATCAGAAGGTTTATGAT+TGG | 0.409248 | 6_3:-85586505 | None:intergenic |
| GCAGAGGCCTGTAGGGAAAC+TGG | 0.410165 | 6_3:-85586912 | None:intergenic |
| TATGAGTCATTCCTTCTTCA+CGG | 0.411566 | 6_3:-85587043 | None:intergenic |
| GGAAGGGAACATCTCTATTC+CGG | 0.415762 | 6_3:+85586782 | Msa0962360:CDS |
| GGCATCTTACATCCCTTGGC+CGG | 0.417882 | 6_3:+85586022 | Msa0962360:CDS |
| GGTTTCACCAACTGTTCAAT+TGG | 0.418177 | 6_3:+85586971 | Msa0962360:CDS |
| GTTGATGTTCCGGTTGCTAC+TGG | 0.419688 | 6_3:+85586807 | Msa0962360:CDS |
| AGGACCTTATATGAGATTGC+CGG | 0.421852 | 6_3:+85586237 | Msa0962360:CDS |
| AAGAGAACCGTTTGGGCAGC+AGG | 0.433375 | 6_3:+85586081 | Msa0962360:CDS |
| GACCACCCTTTGCACGGGTT+TGG | 0.440211 | 6_3:-85587337 | None:intergenic |
| TCATAAACCTTCTGATGGTA+AGG | 0.441255 | 6_3:+85586509 | Msa0962360:CDS |
| CCGTTGAAGGACAACCCTTC+CGG | 0.442680 | 6_3:+85586570 | Msa0962360:CDS |
| CGATATTGTTTGCTGCGTGT+TGG | 0.447939 | 6_3:-85587118 | None:intergenic |
| TGCTCCATTGACAGCTCTCT+CGG | 0.449728 | 6_3:+85585807 | Msa0962360:CDS |
| GATATTGTTTGCTGCGTGTT+GGG | 0.449841 | 6_3:-85587117 | None:intergenic |
| GATTGGAATCATCCTTTCTA+GGG | 0.453122 | 6_3:-85586488 | None:intergenic |
| ACGAGTTTGCTTCTGCGCCT+TGG | 0.454391 | 6_3:-85587288 | None:intergenic |
| CGCGGTTCCTTTATTGACAC+TGG | 0.457256 | 6_3:+85586725 | Msa0962360:CDS |
| GCGGTCCTTTGCTCAGGCTC+TGG | 0.457659 | 6_3:+85585750 | Msa0962360:CDS |
| CCCGTAATTGTCCGTGAAGA+AGG | 0.457841 | 6_3:+85587032 | Msa0962360:CDS |
| ACCTACTGCGCAGCCTTTGG+TGG | 0.457889 | 6_3:+85586623 | Msa0962360:CDS |
| GCATCTTACATCCCTTGGCC+GGG | 0.457907 | 6_3:+85586023 | Msa0962360:CDS |
| CAGATTTGGAGGATGTCAAC+AGG | 0.458305 | 6_3:+85587009 | Msa0962360:CDS |
| ACCGCCGCGGTCCTTTGCTC+AGG | 0.458706 | 6_3:+85585744 | Msa0962360:CDS |
| TAACAAAATCATTTGGAAGA+TGG | 0.459700 | 6_3:-85587362 | None:intergenic |
| CCATGGCATCTTACATCCCT+TGG | 0.460601 | 6_3:+85586018 | Msa0962360:CDS |
| AGGTGGGGTTTCAAAGGCCT+TGG | 0.465142 | 6_3:-85586604 | None:intergenic |
| AACTCTGCCTGCCAGTCAAA+AGG | 0.469964 | 6_3:-85585637 | None:intergenic |
| GAGTCTACAAGGTCAACAAT+AGG | 0.470369 | 6_3:-85586870 | None:intergenic |
| TATGGTGTTGTTTCCGGCAA+GGG | 0.471372 | 6_3:-85585661 | None:intergenic |
| AACAGTACCTGCTGCCCAAA+CGG | 0.474180 | 6_3:-85586088 | None:intergenic |
| CGCAGTAGGTGGGGTTTCAA+AGG | 0.475757 | 6_3:-85586610 | None:intergenic |
| CCAAAGGCTGCGCAGTAGGT+GGG | 0.476841 | 6_3:-85586620 | None:intergenic |
| AGATGATAAGAGAACCGTTT+GGG | 0.479247 | 6_3:+85586074 | Msa0962360:CDS |
| TGGGGTTTCAAAGGCCTTGG+AGG | 0.481400 | 6_3:-85586601 | None:intergenic |
| TCCTACCAAACCCGTGCAAA+GGG | 0.482386 | 6_3:+85587332 | Msa0962360:CDS |
| ACCAAAGGCTGCGCAGTAGG+TGG | 0.483344 | 6_3:-85586621 | None:intergenic |
| ACCTGAGTGGATGCCGTTGA+AGG | 0.483352 | 6_3:+85586557 | Msa0962360:CDS |
| GGACCTTATATGAGATTGCC+GGG | 0.483654 | 6_3:+85586238 | Msa0962360:CDS |
| TTTCCACAATTTCTGTAACT+TGG | 0.484117 | 6_3:-85585986 | None:intergenic |
| GGAATAGAGATGTTCCCTTC+CGG | 0.485334 | 6_3:-85586780 | None:intergenic |
| GTCCTTTGCTCAGGCTCTGG+TGG | 0.485516 | 6_3:+85585753 | Msa0962360:CDS |
| TGAGCAAAGGACCGCGGCGG+TGG | 0.490448 | 6_3:-85585742 | None:intergenic |
| CCCTCATACTCTATTGCCAA+TGG | 0.490756 | 6_3:-85586399 | None:intergenic |
| CTGTACCTGCAGAGGCCTGT+AGG | 0.492903 | 6_3:-85586920 | None:intergenic |
| GTGCTAACATGTTGCTGTAC+GGG | 0.497200 | 6_3:-85587179 | None:intergenic |
| CAGAAATTGTGGAAAGTGAA+AGG | 0.497401 | 6_3:+85585994 | Msa0962360:CDS |
| ATTGTCACCAGTGTCAATAA+AGG | 0.497504 | 6_3:-85586732 | None:intergenic |
| ATTGGAGCATGTTCATGTGC+AGG | 0.501827 | 6_3:+85586842 | Msa0962360:CDS |
| CACTGATGGTGCAGATTTGG+AGG | 0.503996 | 6_3:+85586998 | Msa0962360:CDS |
| GGTACTGTTAGCTTGAAGCC+AGG | 0.504757 | 6_3:+85586102 | Msa0962360:CDS |
| TTGGAGGAGCCTGTTCCGGA+AGG | 0.504897 | 6_3:-85586585 | None:intergenic |
| CCGGAAGGGTTGTCCTTCAA+CGG | 0.505217 | 6_3:-85586570 | None:intergenic |
| ACTGATGACGTTTACTCTTG+TGG | 0.507267 | 6_3:+85585880 | Msa0962360:CDS |
| CGTGCTAACATGTTGCTGTA+CGG | 0.509516 | 6_3:-85587180 | None:intergenic |
| GATGTTCCCTTCCGGAGGTA+TGG | 0.509562 | 6_3:-85586772 | None:intergenic |
| CTTCCGGTGCCATCCATTCG+TGG | 0.512209 | 6_3:+85585835 | Msa0962360:CDS |
| TAACTTGGCAGCGAGATCCT+TGG | 0.517471 | 6_3:-85585971 | None:intergenic |
| CATAAACCTTCTGATGGTAA+GGG | 0.520256 | 6_3:+85586510 | Msa0962360:CDS |
| GCAACCGGAACATCAACAAC+CGG | 0.521555 | 6_3:-85586801 | None:intergenic |
| AAATGAGGACCAGTAGCAAC+CGG | 0.522245 | 6_3:-85586816 | None:intergenic |
| GCGAGATCCTTGGAGGAGAA+AGG | 0.523152 | 6_3:-85585961 | None:intergenic |
| ATATGGTGTTGTTTCCGGCA+AGG | 0.527756 | 6_3:-85585662 | None:intergenic |
| CCTCATACTCTATTGCCAAT+GGG | 0.528799 | 6_3:-85586398 | None:intergenic |
| AAGGACCGCGGCGGTGGTGT+AGG | 0.528905 | 6_3:-85585736 | None:intergenic |
| CTACTGCAGTTGAGTCTACA+AGG | 0.529582 | 6_3:-85586881 | None:intergenic |
| AACTAACCGCCCTCTAAGGT+TGG | 0.531618 | 6_3:-85585920 | None:intergenic |
| AGAGCTGTCAATGGAGCAGA+AGG | 0.531865 | 6_3:-85585802 | None:intergenic |
| TGTACCTGCAGAGGCCTGTA+GGG | 0.532997 | 6_3:-85586919 | None:intergenic |
| ATGGAAGACCACCCTTTGCA+CGG | 0.533345 | 6_3:-85587343 | None:intergenic |
| TCCTTCAACGGCATCCACTC+AGG | 0.533824 | 6_3:-85586558 | None:intergenic |
| CAAAGGCTGCGCAGTAGGTG+GGG | 0.534864 | 6_3:-85586619 | None:intergenic |
| CTGCCAAGTTACAGAAATTG+TGG | 0.537117 | 6_3:+85585983 | Msa0962360:CDS |
| AGAAATTGTGGAAAGTGAAA+GGG | 0.537173 | 6_3:+85585995 | Msa0962360:CDS |
| ACATGCTCCAATTGAAAATG+AGG | 0.537927 | 6_3:-85586831 | None:intergenic |
| ATGAGATTGCCGGGGCGGTA+GGG | 0.537966 | 6_3:+85586247 | Msa0962360:CDS |
| ATGGACAGTGCCAAAGATCA+AGG | 0.538378 | 6_3:-85587088 | None:intergenic |
| TGGAAGACCACCCTTTGCAC+GGG | 0.540712 | 6_3:-85587342 | None:intergenic |
| GATCCATGTCAACCAGAACT+CGG | 0.543069 | 6_3:-85586323 | None:intergenic |
| CACGAATGGATGGCACCGGA+AGG | 0.543538 | 6_3:-85585834 | None:intergenic |
| GGGTCCGAGAGAGCTGTCAA+TGG | 0.544103 | 6_3:-85585811 | None:intergenic |
| AGATAGCATGTCACCACGAA+TGG | 0.544355 | 6_3:-85585848 | None:intergenic |
| GGTTGACATGGATCTTTCGA+AGG | 0.546100 | 6_3:+85586332 | Msa0962360:CDS |
| TGGAGGAGCCTGTTCCGGAA+GGG | 0.546886 | 6_3:-85586584 | None:intergenic |
| CATCTTACATCCCTTGGCCG+GGG | 0.548142 | 6_3:+85586024 | Msa0962360:CDS |
| CTTGGCAGCGAGATCCTTGG+AGG | 0.548493 | 6_3:-85585968 | None:intergenic |
| TTTGCAAAACCAACCTTAGA+GGG | 0.549279 | 6_3:+85585911 | Msa0962360:CDS |
| TGACGTTTACTCTTGTGGAC+TGG | 0.549394 | 6_3:+85585885 | Msa0962360:CDS |
| ACGAATGGATGGCACCGGAA+GGG | 0.550215 | 6_3:-85585833 | None:intergenic |
| ATCTTACATCCCTTGGCCGG+GGG | 0.552060 | 6_3:+85586025 | Msa0962360:CDS |
| ACAGGATGCTGCCATACCTC+CGG | 0.552350 | 6_3:+85586761 | Msa0962360:CDS |
| GTTCAATTGGTTGCCACTGA+TGG | 0.552511 | 6_3:+85586984 | Msa0962360:CDS |
| GAATGGATGGCACCGGAAGG+GGG | 0.552784 | 6_3:-85585831 | None:intergenic |
| TCTTTCCCCTTACCATCAGA+AGG | 0.553118 | 6_3:-85586516 | None:intergenic |
| TATGAGATTGCCGGGGCGGT+AGG | 0.554225 | 6_3:+85586246 | Msa0962360:CDS |
| CTCTCCATCCAATATTCTTG+TGG | 0.555888 | 6_3:-85586216 | None:intergenic |
| ACCCTTTGCACGGGTTTGGT+AGG | 0.557867 | 6_3:-85587333 | None:intergenic |
| GTTTCCCTACAGGCCTCTGC+AGG | 0.558002 | 6_3:+85586915 | Msa0962360:CDS |
| TTCCGGAACAGGCTCCTCCA+AGG | 0.558697 | 6_3:+85586587 | Msa0962360:CDS |
| TGACACACCAGTTTCCCTAC+AGG | 0.559485 | 6_3:+85586905 | Msa0962360:CDS |
| TCGGTGGTTGTACCCTAGAA+AGG | 0.560005 | 6_3:+85586476 | Msa0962360:CDS |
| ATCCATGTCAACCAGAACTC+GGG | 0.561971 | 6_3:-85586322 | None:intergenic |
| TGATGTTCATAATGTTGATA+GGG | 0.563302 | 6_3:+85586947 | Msa0962360:CDS |
| GTCCTACCAAACCCGTGCAA+AGG | 0.567981 | 6_3:+85587331 | Msa0962360:CDS |
| TGCCCGAGTTCTGGTTGACA+TGG | 0.568592 | 6_3:+85586320 | Msa0962360:CDS |
| CCAAGGGATGTAAGATGCCA+TGG | 0.569457 | 6_3:-85586018 | None:intergenic |
| GTGGCAACCAATTGAACAGT+TGG | 0.570795 | 6_3:-85586978 | None:intergenic |
| GCTGTTGATGACAGTACCAT+TGG | 0.571230 | 6_3:-85585700 | None:intergenic |
| TCAAATAATCTGAGTAACCC+TGG | 0.571580 | 6_3:-85586120 | None:intergenic |
| CACAAGAATATTGGATGGAG+AGG | 0.573629 | 6_3:+85586217 | Msa0962360:CDS |
| TCCAATCATAAACCTTCTGA+TGG | 0.573872 | 6_3:+85586504 | Msa0962360:CDS |
| TAGATGATAAGAGAACCGTT+TGG | 0.574157 | 6_3:+85586073 | Msa0962360:CDS |
| AAACCTGAGTGTGAGTTTGT+CGG | 0.574603 | 6_3:-85586173 | None:intergenic |
| TAACGGAGTCCCTACCGCCC+CGG | 0.578601 | 6_3:-85586256 | None:intergenic |
| AGATAAGCCTTTCTCCTCCA+AGG | 0.582827 | 6_3:+85585954 | Msa0962360:CDS |
| GCTGCGTGTTGGGATAAAGA+TGG | 0.583362 | 6_3:-85587107 | None:intergenic |
| GCCATGATGTTTCTAAGTGT+CGG | 0.583606 | 6_3:+85586457 | Msa0962360:CDS |
| ATGGTGTTGTTTCCGGCAAG+GGG | 0.585125 | 6_3:-85585660 | None:intergenic |
| CAATATCGCAGATGAGGCAG+AGG | 0.585247 | 6_3:+85587133 | Msa0962360:CDS |
| AGCATGTCACCACGAATGGA+TGG | 0.589510 | 6_3:-85585844 | None:intergenic |
| GTTAGCACGAACATACAGAA+TGG | 0.591971 | 6_3:+85587194 | Msa0962360:CDS |
| TGTTCATAATGTTGATAGGG+AGG | 0.593845 | 6_3:+85586950 | Msa0962360:CDS |
| ATAAACCTTCTGATGGTAAG+GGG | 0.593867 | 6_3:+85586511 | Msa0962360:CDS |
| GTACTGTTAGCTTGAAGCCA+GGG | 0.593990 | 6_3:+85586103 | Msa0962360:CDS |
| TAAAGTTGCACCTTCTCCAA+TGG | 0.593991 | 6_3:+85585684 | Msa0962360:CDS |
| ACTGGTGACAATTGAATCAC+AGG | 0.597277 | 6_3:+85586743 | Msa0962360:CDS |
| GCCACCAAAGGCTGCGCAGT+AGG | 0.597832 | 6_3:-85586624 | None:intergenic |
| GATCAACGAATGGCTGAGGA+AGG | 0.599554 | 6_3:+85587248 | Msa0962360:CDS |
| GAGATCATGGTGGAACGTGA+AGG | 0.602091 | 6_3:+85586366 | Msa0962360:CDS |
| ATATGATCAACGAATGGCTG+AGG | 0.602815 | 6_3:+85587244 | Msa0962360:CDS |
| ATTACCACAAGAATATTGGA+TGG | 0.604310 | 6_3:+85586212 | Msa0962360:CDS |
| ACCGACACTTAGAAACATCA+TGG | 0.606005 | 6_3:-85586458 | None:intergenic |
| TGTGGAAAGTGAAAGGGCCA+TGG | 0.607510 | 6_3:+85586001 | Msa0962360:CDS |
| TCACCACGAATGGATGGCAC+CGG | 0.608986 | 6_3:-85585838 | None:intergenic |
| TTTACAAAACGTTACAGACG+AGG | 0.610486 | 6_3:+85586680 | Msa0962360:CDS |
| CTCCAAATCTGCACCATCAG+TGG | 0.612601 | 6_3:-85586997 | None:intergenic |
| TTCCACCAGAGCCTGAGCAA+AGG | 0.616264 | 6_3:-85585755 | None:intergenic |
| TGTCAATGGAGCAGAAGGAA+CGG | 0.616268 | 6_3:-85585797 | None:intergenic |
| GGGTTTGGTAGGACGTGCCA+AGG | 0.618902 | 6_3:-85587322 | None:intergenic |
| AGGGCGGTTAGTTCTGAACA+AGG | 0.618926 | 6_3:+85585930 | Msa0962360:CDS |
| TACCAAACCCGTGCAAAGGG+TGG | 0.625886 | 6_3:+85587335 | Msa0962360:CDS |
| AGCAAACAATATCGCAGATG+AGG | 0.629356 | 6_3:+85587127 | Msa0962360:CDS |
| CTTATATGAGATTGCCGGGG+CGG | 0.629417 | 6_3:+85586242 | Msa0962360:CDS |
| CTAACATGTTGCTGTACGGG+AGG | 0.631736 | 6_3:-85587176 | None:intergenic |
| ACGTGAATATGATCAACGAA+TGG | 0.641353 | 6_3:+85587238 | Msa0962360:CDS |
| GGAGCATGTTCATGTGCAGG+AGG | 0.648250 | 6_3:+85586845 | Msa0962360:CDS |
| GATGCTGCCATACCTCCGGA+AGG | 0.649101 | 6_3:+85586765 | Msa0962360:CDS |
| AGAGCCTGAGCAAAGGACCG+CGG | 0.653771 | 6_3:-85585748 | None:intergenic |
| GCACCGACAAACTCACACTC+AGG | 0.655343 | 6_3:+85586170 | Msa0962360:CDS |
| ATCAACATTATGAACATCAG+CGG | 0.658478 | 6_3:-85586943 | None:intergenic |
| TCAACGTGATTTGCATTCCG+CGG | 0.658695 | 6_3:+85586707 | Msa0962360:CDS |
| ATGCTGCCATACCTCCGGAA+GGG | 0.659239 | 6_3:+85586766 | Msa0962360:CDS |
| GTCACGTTATCAATGAGTAA+CGG | 0.666363 | 6_3:-85586273 | None:intergenic |
| ATGATGTTTCTAAGTGTCGG+TGG | 0.667443 | 6_3:+85586460 | Msa0962360:CDS |
| ATCAGCGGCTGTACCTGCAG+AGG | 0.668496 | 6_3:-85586928 | None:intergenic |
| ATAGAGATGTTCCCTTCCGG+AGG | 0.670021 | 6_3:-85586777 | None:intergenic |
| TAACATGTTGCTGTACGGGA+GGG | 0.670698 | 6_3:-85587175 | None:intergenic |
| TCAAGGTCATGCTGAATACG+AGG | 0.671347 | 6_3:-85587071 | None:intergenic |
| CTTCACTCAAGTTCTTACCA+AGG | 0.672728 | 6_3:+85587271 | Msa0962360:CDS |
| GCAAAACCAACCTTAGAGGG+CGG | 0.673962 | 6_3:+85585914 | Msa0962360:CDS |
| GATGACAGTACCATTGGAGA+AGG | 0.682986 | 6_3:-85585694 | None:intergenic |
| CCATTGGCAATAGAGTATGA+GGG | 0.699756 | 6_3:+85586399 | Msa0962360:CDS |
| GGTACTGTCATCAACAGCAG+CGG | 0.702081 | 6_3:+85585705 | Msa0962360:CDS |
| CAGTGTCAATAAAGGAACCG+CGG | 0.703378 | 6_3:-85586724 | None:intergenic |
| GACCTTATATGAGATTGCCG+GGG | 0.717765 | 6_3:+85586239 | Msa0962360:CDS |
| GGGCGGTTAGTTCTGAACAA+GGG | 0.719499 | 6_3:+85585931 | Msa0962360:CDS |
| GCCTGAGCAAAGGACCGCGG+CGG | 0.727165 | 6_3:-85585745 | None:intergenic |
| CAATGGAGCAGAAGGAACGG+CGG | 0.735008 | 6_3:-85585794 | None:intergenic |
| CATCACCTACACCACCGCCG+CGG | 0.759413 | 6_3:+85585731 | Msa0962360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTACAATGTTTACAAAAAT+CGG | - | chr6_3:85586430-85586449 | None:intergenic | 20.0% |
| !! | TGTACAATGTTTACAAAAAT+CGG | - | chr6_3:85586430-85586449 | None:intergenic | 20.0% |
| !! | GGATATATTTTATGAGATCA+TGG | + | chr6_3:85586353-85586372 | Msa0962360:CDS | 25.0% |
| !! | TATATTTTATGAGATCATGG+TGG | + | chr6_3:85586356-85586375 | Msa0962360:CDS | 25.0% |
| ! | GTACAATGTTTACAAAAATC+GGG | - | chr6_3:85586429-85586448 | None:intergenic | 25.0% |
| ! | TGTAAACATTGTACAAGTAT+TGG | + | chr6_3:85586435-85586454 | Msa0962360:CDS | 25.0% |
| ! | TGATGTTCATAATGTTGATA+GGG | + | chr6_3:85586947-85586966 | Msa0962360:CDS | 25.0% |
| !! | GGATATATTTTATGAGATCA+TGG | + | chr6_3:85586353-85586372 | Msa0962360:CDS | 25.0% |
| !! | TATATTTTATGAGATCATGG+TGG | + | chr6_3:85586356-85586375 | Msa0962360:CDS | 25.0% |
| ! | GTACAATGTTTACAAAAATC+GGG | - | chr6_3:85586429-85586448 | None:intergenic | 25.0% |
| ! | TGTAAACATTGTACAAGTAT+TGG | + | chr6_3:85586435-85586454 | Msa0962360:CDS | 25.0% |
| ! | TGATGTTCATAATGTTGATA+GGG | + | chr6_3:85586947-85586966 | Msa0962360:CDS | 25.0% |
| !! | ACTTTATATGGTGTTGTTTC+CGG | - | chr6_3:85585670-85585689 | None:intergenic | 30.0% |
| TTTCCACAATTTCTGTAACT+TGG | - | chr6_3:85585989-85586008 | None:intergenic | 30.0% | |
| AGAAATTGTGGAAAGTGAAA+GGG | + | chr6_3:85585995-85586014 | Msa0962360:CDS | 30.0% | |
| AGAAAAATTCATAAAACCCC+CGG | - | chr6_3:85586044-85586063 | None:intergenic | 30.0% | |
| GGTTACTCAGATTATTTGAA+TGG | + | chr6_3:85586124-85586143 | Msa0962360:CDS | 30.0% | |
| ATTACCACAAGAATATTGGA+TGG | + | chr6_3:85586212-85586231 | Msa0962360:CDS | 30.0% | |
| !!! | ATCCACTCAGGTTTTTTTAT+CGG | - | chr6_3:85586549-85586568 | None:intergenic | 30.0% |
| !!! | ACATTATTTTTAGCCACCAA+AGG | - | chr6_3:85586639-85586658 | None:intergenic | 30.0% |
| ATCAACATTATGAACATCAG+CGG | - | chr6_3:85586946-85586965 | None:intergenic | 30.0% | |
| CTGATGTTCATAATGTTGAT+AGG | + | chr6_3:85586946-85586965 | Msa0962360:CDS | 30.0% | |
| ! | TACAGAATGGACTTGATTTA+TGG | + | chr6_3:85587207-85587226 | Msa0962360:CDS | 30.0% |
| ! | ACAGAATGGACTTGATTTAT+GGG | + | chr6_3:85587208-85587227 | Msa0962360:CDS | 30.0% |
| TTGATCATATTCACGTATTC+TGG | - | chr6_3:85587234-85587253 | None:intergenic | 30.0% | |
| !! | ACTTTATATGGTGTTGTTTC+CGG | - | chr6_3:85585670-85585689 | None:intergenic | 30.0% |
| TTTCCACAATTTCTGTAACT+TGG | - | chr6_3:85585989-85586008 | None:intergenic | 30.0% | |
| AGAAATTGTGGAAAGTGAAA+GGG | + | chr6_3:85585995-85586014 | Msa0962360:CDS | 30.0% | |
| AGAAAAATTCATAAAACCCC+CGG | - | chr6_3:85586044-85586063 | None:intergenic | 30.0% | |
| GGTTACTCAGATTATTTGAA+TGG | + | chr6_3:85586124-85586143 | Msa0962360:CDS | 30.0% | |
| ATTACCACAAGAATATTGGA+TGG | + | chr6_3:85586212-85586231 | Msa0962360:CDS | 30.0% | |
| !!! | ATCCACTCAGGTTTTTTTAT+CGG | - | chr6_3:85586549-85586568 | None:intergenic | 30.0% |
| !!! | ACATTATTTTTAGCCACCAA+AGG | - | chr6_3:85586639-85586658 | None:intergenic | 30.0% |
| ATCAACATTATGAACATCAG+CGG | - | chr6_3:85586946-85586965 | None:intergenic | 30.0% | |
| CTGATGTTCATAATGTTGAT+AGG | + | chr6_3:85586946-85586965 | Msa0962360:CDS | 30.0% | |
| ! | TACAGAATGGACTTGATTTA+TGG | + | chr6_3:85587207-85587226 | Msa0962360:CDS | 30.0% |
| ! | ACAGAATGGACTTGATTTAT+GGG | + | chr6_3:85587208-85587227 | Msa0962360:CDS | 30.0% |
| TTGATCATATTCACGTATTC+TGG | - | chr6_3:85587234-85587253 | None:intergenic | 30.0% | |
| ! | TTTTGCAAAACCAACCTTAG+AGG | + | chr6_3:85585910-85585929 | Msa0962360:CDS | 35.0% |
| TTTGCAAAACCAACCTTAGA+GGG | + | chr6_3:85585911-85585930 | Msa0962360:CDS | 35.0% | |
| CAGAAATTGTGGAAAGTGAA+AGG | + | chr6_3:85585994-85586013 | Msa0962360:CDS | 35.0% | |
| TAGATGATAAGAGAACCGTT+TGG | + | chr6_3:85586073-85586092 | Msa0962360:CDS | 35.0% | |
| AGATGATAAGAGAACCGTTT+GGG | + | chr6_3:85586074-85586093 | Msa0962360:CDS | 35.0% | |
| TCAAATAATCTGAGTAACCC+TGG | - | chr6_3:85586123-85586142 | None:intergenic | 35.0% | |
| GGGAATTACCACAAGAATAT+TGG | + | chr6_3:85586208-85586227 | Msa0962360:CDS | 35.0% | |
| GTCACGTTATCAATGAGTAA+CGG | - | chr6_3:85586276-85586295 | None:intergenic | 35.0% | |
| GATTGGAATCATCCTTTCTA+GGG | - | chr6_3:85586491-85586510 | None:intergenic | 35.0% | |
| TGATTGGAATCATCCTTTCT+AGG | - | chr6_3:85586492-85586511 | None:intergenic | 35.0% | |
| TCCAATCATAAACCTTCTGA+TGG | + | chr6_3:85586504-85586523 | Msa0962360:CDS | 35.0% | |
| ACCATCAGAAGGTTTATGAT+TGG | - | chr6_3:85586508-85586527 | None:intergenic | 35.0% | |
| TCATAAACCTTCTGATGGTA+AGG | + | chr6_3:85586509-85586528 | Msa0962360:CDS | 35.0% | |
| CATAAACCTTCTGATGGTAA+GGG | + | chr6_3:85586510-85586529 | Msa0962360:CDS | 35.0% | |
| ATAAACCTTCTGATGGTAAG+GGG | + | chr6_3:85586511-85586530 | Msa0962360:CDS | 35.0% | |
| TTCCGATAAAAAAACCTGAG+TGG | + | chr6_3:85586544-85586563 | Msa0962360:CDS | 35.0% | |
| ! | TCGTCTGTAACGTTTTGTAA+AGG | - | chr6_3:85586681-85586700 | None:intergenic | 35.0% |
| TTTACAAAACGTTACAGACG+AGG | + | chr6_3:85586680-85586699 | Msa0962360:CDS | 35.0% | |
| ATTGTCACCAGTGTCAATAA+AGG | - | chr6_3:85586735-85586754 | None:intergenic | 35.0% | |
| ! | TACTGGTCCTCATTTTCAAT+TGG | + | chr6_3:85586824-85586843 | Msa0962360:CDS | 35.0% |
| ACATGCTCCAATTGAAAATG+AGG | - | chr6_3:85586834-85586853 | None:intergenic | 35.0% | |
| ! | TGTTCATAATGTTGATAGGG+AGG | + | chr6_3:85586950-85586969 | Msa0962360:CDS | 35.0% |
| TATGAGTCATTCCTTCTTCA+CGG | - | chr6_3:85587046-85587065 | None:intergenic | 35.0% | |
| ACGTGAATATGATCAACGAA+TGG | + | chr6_3:85587238-85587257 | Msa0962360:CDS | 35.0% | |
| ! | TTTTGCAAAACCAACCTTAG+AGG | + | chr6_3:85585910-85585929 | Msa0962360:CDS | 35.0% |
| TTTGCAAAACCAACCTTAGA+GGG | + | chr6_3:85585911-85585930 | Msa0962360:CDS | 35.0% | |
| CAGAAATTGTGGAAAGTGAA+AGG | + | chr6_3:85585994-85586013 | Msa0962360:CDS | 35.0% | |
| TAGATGATAAGAGAACCGTT+TGG | + | chr6_3:85586073-85586092 | Msa0962360:CDS | 35.0% | |
| AGATGATAAGAGAACCGTTT+GGG | + | chr6_3:85586074-85586093 | Msa0962360:CDS | 35.0% | |
| TCAAATAATCTGAGTAACCC+TGG | - | chr6_3:85586123-85586142 | None:intergenic | 35.0% | |
| GGGAATTACCACAAGAATAT+TGG | + | chr6_3:85586208-85586227 | Msa0962360:CDS | 35.0% | |
| GTCACGTTATCAATGAGTAA+CGG | - | chr6_3:85586276-85586295 | None:intergenic | 35.0% | |
| GATTGGAATCATCCTTTCTA+GGG | - | chr6_3:85586491-85586510 | None:intergenic | 35.0% | |
| TGATTGGAATCATCCTTTCT+AGG | - | chr6_3:85586492-85586511 | None:intergenic | 35.0% | |
| TCCAATCATAAACCTTCTGA+TGG | + | chr6_3:85586504-85586523 | Msa0962360:CDS | 35.0% | |
| ACCATCAGAAGGTTTATGAT+TGG | - | chr6_3:85586508-85586527 | None:intergenic | 35.0% | |
| TCATAAACCTTCTGATGGTA+AGG | + | chr6_3:85586509-85586528 | Msa0962360:CDS | 35.0% | |
| CATAAACCTTCTGATGGTAA+GGG | + | chr6_3:85586510-85586529 | Msa0962360:CDS | 35.0% | |
| ATAAACCTTCTGATGGTAAG+GGG | + | chr6_3:85586511-85586530 | Msa0962360:CDS | 35.0% | |
| TTCCGATAAAAAAACCTGAG+TGG | + | chr6_3:85586544-85586563 | Msa0962360:CDS | 35.0% | |
| ! | TCGTCTGTAACGTTTTGTAA+AGG | - | chr6_3:85586681-85586700 | None:intergenic | 35.0% |
| TTTACAAAACGTTACAGACG+AGG | + | chr6_3:85586680-85586699 | Msa0962360:CDS | 35.0% | |
| ATTGTCACCAGTGTCAATAA+AGG | - | chr6_3:85586735-85586754 | None:intergenic | 35.0% | |
| ! | TACTGGTCCTCATTTTCAAT+TGG | + | chr6_3:85586824-85586843 | Msa0962360:CDS | 35.0% |
| ACATGCTCCAATTGAAAATG+AGG | - | chr6_3:85586834-85586853 | None:intergenic | 35.0% | |
| ! | TGTTCATAATGTTGATAGGG+AGG | + | chr6_3:85586950-85586969 | Msa0962360:CDS | 35.0% |
| TATGAGTCATTCCTTCTTCA+CGG | - | chr6_3:85587046-85587065 | None:intergenic | 35.0% | |
| ACGTGAATATGATCAACGAA+TGG | + | chr6_3:85587238-85587257 | Msa0962360:CDS | 35.0% | |
| ! | GGAGAAGGTGCAACTTTATA+TGG | - | chr6_3:85585682-85585701 | None:intergenic | 40.0% |
| TAAAGTTGCACCTTCTCCAA+TGG | + | chr6_3:85585684-85585703 | Msa0962360:CDS | 40.0% | |
| ! | ACTGATGACGTTTACTCTTG+TGG | + | chr6_3:85585880-85585899 | Msa0962360:CDS | 40.0% |
| CTGCCAAGTTACAGAAATTG+TGG | + | chr6_3:85585983-85586002 | Msa0962360:CDS | 40.0% | |
| AAACCTGAGTGTGAGTTTGT+CGG | - | chr6_3:85586176-85586195 | None:intergenic | 40.0% | |
| ACAAACTCACACTCAGGTTT+GGG | + | chr6_3:85586176-85586195 | Msa0962360:CDS | 40.0% | |
| ! | TCAGGTTTGGGTTCGATTAT+GGG | + | chr6_3:85586188-85586207 | Msa0962360:CDS | 40.0% |
| CTCTCCATCCAATATTCTTG+TGG | - | chr6_3:85586219-85586238 | None:intergenic | 40.0% | |
| CACAAGAATATTGGATGGAG+AGG | + | chr6_3:85586217-85586236 | Msa0962360:CDS | 40.0% | |
| AGGACCTTATATGAGATTGC+CGG | + | chr6_3:85586237-85586256 | Msa0962360:CDS | 40.0% | |
| GTGACTCGTAACAGACTTTA+CGG | + | chr6_3:85586291-85586310 | Msa0962360:CDS | 40.0% | |
| ! | TGAAGGTTTTGCATTCCCAT+TGG | + | chr6_3:85586383-85586402 | Msa0962360:CDS | 40.0% |
| CCTCATACTCTATTGCCAAT+GGG | - | chr6_3:85586401-85586420 | None:intergenic | 40.0% | |
| CCATTGGCAATAGAGTATGA+GGG | + | chr6_3:85586399-85586418 | Msa0962360:CDS | 40.0% | |
| ! | GCCATGATGTTTCTAAGTGT+CGG | + | chr6_3:85586457-85586476 | Msa0962360:CDS | 40.0% |
| ACCGACACTTAGAAACATCA+TGG | - | chr6_3:85586461-85586480 | None:intergenic | 40.0% | |
| !! | ATGATGTTTCTAAGTGTCGG+TGG | + | chr6_3:85586460-85586479 | Msa0962360:CDS | 40.0% |
| ACTGGTGACAATTGAATCAC+AGG | + | chr6_3:85586743-85586762 | Msa0962360:CDS | 40.0% | |
| TATTCCGGTTGTTGATGTTC+CGG | + | chr6_3:85586797-85586816 | Msa0962360:CDS | 40.0% | |
| GAGTCTACAAGGTCAACAAT+AGG | - | chr6_3:85586873-85586892 | None:intergenic | 40.0% | |
| GGTTTCACCAACTGTTCAAT+TGG | + | chr6_3:85586971-85586990 | Msa0962360:CDS | 40.0% | |
| TCCTTCTTCACGGACAATTA+CGG | - | chr6_3:85587036-85587055 | None:intergenic | 40.0% | |
| TTCAGCATGACCTTGATCTT+TGG | + | chr6_3:85587078-85587097 | Msa0962360:CDS | 40.0% | |
| ! | GATATTGTTTGCTGCGTGTT+GGG | - | chr6_3:85587120-85587139 | None:intergenic | 40.0% |
| AGCAAACAATATCGCAGATG+AGG | + | chr6_3:85587127-85587146 | Msa0962360:CDS | 40.0% | |
| GTTAGCACGAACATACAGAA+TGG | + | chr6_3:85587194-85587213 | Msa0962360:CDS | 40.0% | |
| ATATGATCAACGAATGGCTG+AGG | + | chr6_3:85587244-85587263 | Msa0962360:CDS | 40.0% | |
| CTTCACTCAAGTTCTTACCA+AGG | + | chr6_3:85587271-85587290 | Msa0962360:CDS | 40.0% | |
| GCAGAAGCAAACTCGTAAAA+AGG | + | chr6_3:85587295-85587314 | Msa0962360:CDS | 40.0% | |
| ACTCGTAAAAAGGTAGTCCT+TGG | + | chr6_3:85587305-85587324 | Msa0962360:CDS | 40.0% | |
| ! | GGAGAAGGTGCAACTTTATA+TGG | - | chr6_3:85585682-85585701 | None:intergenic | 40.0% |
| TAAAGTTGCACCTTCTCCAA+TGG | + | chr6_3:85585684-85585703 | Msa0962360:CDS | 40.0% | |
| ! | ACTGATGACGTTTACTCTTG+TGG | + | chr6_3:85585880-85585899 | Msa0962360:CDS | 40.0% |
| CTGCCAAGTTACAGAAATTG+TGG | + | chr6_3:85585983-85586002 | Msa0962360:CDS | 40.0% | |
| AAACCTGAGTGTGAGTTTGT+CGG | - | chr6_3:85586176-85586195 | None:intergenic | 40.0% | |
| ACAAACTCACACTCAGGTTT+GGG | + | chr6_3:85586176-85586195 | Msa0962360:CDS | 40.0% | |
| ! | TCAGGTTTGGGTTCGATTAT+GGG | + | chr6_3:85586188-85586207 | Msa0962360:CDS | 40.0% |
| CTCTCCATCCAATATTCTTG+TGG | - | chr6_3:85586219-85586238 | None:intergenic | 40.0% | |
| CACAAGAATATTGGATGGAG+AGG | + | chr6_3:85586217-85586236 | Msa0962360:CDS | 40.0% | |
| AGGACCTTATATGAGATTGC+CGG | + | chr6_3:85586237-85586256 | Msa0962360:CDS | 40.0% | |
| GTGACTCGTAACAGACTTTA+CGG | + | chr6_3:85586291-85586310 | Msa0962360:CDS | 40.0% | |
| ! | TGAAGGTTTTGCATTCCCAT+TGG | + | chr6_3:85586383-85586402 | Msa0962360:CDS | 40.0% |
| CCTCATACTCTATTGCCAAT+GGG | - | chr6_3:85586401-85586420 | None:intergenic | 40.0% | |
| CCATTGGCAATAGAGTATGA+GGG | + | chr6_3:85586399-85586418 | Msa0962360:CDS | 40.0% | |
| ! | GCCATGATGTTTCTAAGTGT+CGG | + | chr6_3:85586457-85586476 | Msa0962360:CDS | 40.0% |
| ACCGACACTTAGAAACATCA+TGG | - | chr6_3:85586461-85586480 | None:intergenic | 40.0% | |
| !! | ATGATGTTTCTAAGTGTCGG+TGG | + | chr6_3:85586460-85586479 | Msa0962360:CDS | 40.0% |
| ACTGGTGACAATTGAATCAC+AGG | + | chr6_3:85586743-85586762 | Msa0962360:CDS | 40.0% | |
| TATTCCGGTTGTTGATGTTC+CGG | + | chr6_3:85586797-85586816 | Msa0962360:CDS | 40.0% | |
| GAGTCTACAAGGTCAACAAT+AGG | - | chr6_3:85586873-85586892 | None:intergenic | 40.0% | |
| GGTTTCACCAACTGTTCAAT+TGG | + | chr6_3:85586971-85586990 | Msa0962360:CDS | 40.0% | |
| TCCTTCTTCACGGACAATTA+CGG | - | chr6_3:85587036-85587055 | None:intergenic | 40.0% | |
| TTCAGCATGACCTTGATCTT+TGG | + | chr6_3:85587078-85587097 | Msa0962360:CDS | 40.0% | |
| ! | GATATTGTTTGCTGCGTGTT+GGG | - | chr6_3:85587120-85587139 | None:intergenic | 40.0% |
| AGCAAACAATATCGCAGATG+AGG | + | chr6_3:85587127-85587146 | Msa0962360:CDS | 40.0% | |
| GTTAGCACGAACATACAGAA+TGG | + | chr6_3:85587194-85587213 | Msa0962360:CDS | 40.0% | |
| ATATGATCAACGAATGGCTG+AGG | + | chr6_3:85587244-85587263 | Msa0962360:CDS | 40.0% | |
| CTTCACTCAAGTTCTTACCA+AGG | + | chr6_3:85587271-85587290 | Msa0962360:CDS | 40.0% | |
| GCAGAAGCAAACTCGTAAAA+AGG | + | chr6_3:85587295-85587314 | Msa0962360:CDS | 40.0% | |
| ACTCGTAAAAAGGTAGTCCT+TGG | + | chr6_3:85587305-85587324 | Msa0962360:CDS | 40.0% | |
| !! | TATGGTGTTGTTTCCGGCAA+GGG | - | chr6_3:85585664-85585683 | None:intergenic | 45.0% |
| !! | ATATGGTGTTGTTTCCGGCA+AGG | - | chr6_3:85585665-85585684 | None:intergenic | 45.0% |
| GATGACAGTACCATTGGAGA+AGG | - | chr6_3:85585697-85585716 | None:intergenic | 45.0% | |
| !! | GCTGTTGATGACAGTACCAT+TGG | - | chr6_3:85585703-85585722 | None:intergenic | 45.0% |
| TGTCAATGGAGCAGAAGGAA+CGG | - | chr6_3:85585800-85585819 | None:intergenic | 45.0% | |
| AGATAGCATGTCACCACGAA+TGG | - | chr6_3:85585851-85585870 | None:intergenic | 45.0% | |
| TGACGTTTACTCTTGTGGAC+TGG | + | chr6_3:85585885-85585904 | Msa0962360:CDS | 45.0% | |
| AGATAAGCCTTTCTCCTCCA+AGG | + | chr6_3:85585954-85585973 | Msa0962360:CDS | 45.0% | |
| ! | GTACTGTTAGCTTGAAGCCA+GGG | + | chr6_3:85586103-85586122 | Msa0962360:CDS | 45.0% |
| GACAAACTCACACTCAGGTT+TGG | + | chr6_3:85586175-85586194 | Msa0962360:CDS | 45.0% | |
| ! | CTCAGGTTTGGGTTCGATTA+TGG | + | chr6_3:85586187-85586206 | Msa0962360:CDS | 45.0% |
| GGACCTTATATGAGATTGCC+GGG | + | chr6_3:85586238-85586257 | Msa0962360:CDS | 45.0% | |
| GACCTTATATGAGATTGCCG+GGG | + | chr6_3:85586239-85586258 | Msa0962360:CDS | 45.0% | |
| ATCCATGTCAACCAGAACTC+GGG | - | chr6_3:85586325-85586344 | None:intergenic | 45.0% | |
| GATCCATGTCAACCAGAACT+CGG | - | chr6_3:85586326-85586345 | None:intergenic | 45.0% | |
| GGTTGACATGGATCTTTCGA+AGG | + | chr6_3:85586332-85586351 | Msa0962360:CDS | 45.0% | |
| CCCATTGGCAATAGAGTATG+AGG | + | chr6_3:85586398-85586417 | Msa0962360:CDS | 45.0% | |
| CCCTCATACTCTATTGCCAA+TGG | - | chr6_3:85586402-85586421 | None:intergenic | 45.0% | |
| TCTTTCCCCTTACCATCAGA+AGG | - | chr6_3:85586519-85586538 | None:intergenic | 45.0% | |
| ! | TCAACGTGATTTGCATTCCG+CGG | + | chr6_3:85586707-85586726 | Msa0962360:CDS | 45.0% |
| CAGTGTCAATAAAGGAACCG+CGG | - | chr6_3:85586727-85586746 | None:intergenic | 45.0% | |
| GGAATAGAGATGTTCCCTTC+CGG | - | chr6_3:85586783-85586802 | None:intergenic | 45.0% | |
| GGAAGGGAACATCTCTATTC+CGG | + | chr6_3:85586782-85586801 | Msa0962360:CDS | 45.0% | |
| AAATGAGGACCAGTAGCAAC+CGG | - | chr6_3:85586819-85586838 | None:intergenic | 45.0% | |
| ATTGGAGCATGTTCATGTGC+AGG | + | chr6_3:85586842-85586861 | Msa0962360:CDS | 45.0% | |
| CTACTGCAGTTGAGTCTACA+AGG | - | chr6_3:85586884-85586903 | None:intergenic | 45.0% | |
| GTGGCAACCAATTGAACAGT+TGG | - | chr6_3:85586981-85587000 | None:intergenic | 45.0% | |
| GTTCAATTGGTTGCCACTGA+TGG | + | chr6_3:85586984-85587003 | Msa0962360:CDS | 45.0% | |
| CAGATTTGGAGGATGTCAAC+AGG | + | chr6_3:85587009-85587028 | Msa0962360:CDS | 45.0% | |
| CCTTCTTCACGGACAATTAC+GGG | - | chr6_3:85587035-85587054 | None:intergenic | 45.0% | |
| TCAAGGTCATGCTGAATACG+AGG | - | chr6_3:85587074-85587093 | None:intergenic | 45.0% | |
| ATGGACAGTGCCAAAGATCA+AGG | - | chr6_3:85587091-85587110 | None:intergenic | 45.0% | |
| ! | CGATATTGTTTGCTGCGTGT+TGG | - | chr6_3:85587121-85587140 | None:intergenic | 45.0% |
| TAACATGTTGCTGTACGGGA+GGG | - | chr6_3:85587178-85587197 | None:intergenic | 45.0% | |
| GTGCTAACATGTTGCTGTAC+GGG | - | chr6_3:85587182-85587201 | None:intergenic | 45.0% | |
| CGTGCTAACATGTTGCTGTA+CGG | - | chr6_3:85587183-85587202 | None:intergenic | 45.0% | |
| !! | TATGGTGTTGTTTCCGGCAA+GGG | - | chr6_3:85585664-85585683 | None:intergenic | 45.0% |
| !! | ATATGGTGTTGTTTCCGGCA+AGG | - | chr6_3:85585665-85585684 | None:intergenic | 45.0% |
| GATGACAGTACCATTGGAGA+AGG | - | chr6_3:85585697-85585716 | None:intergenic | 45.0% | |
| !! | GCTGTTGATGACAGTACCAT+TGG | - | chr6_3:85585703-85585722 | None:intergenic | 45.0% |
| TGTCAATGGAGCAGAAGGAA+CGG | - | chr6_3:85585800-85585819 | None:intergenic | 45.0% | |
| AGATAGCATGTCACCACGAA+TGG | - | chr6_3:85585851-85585870 | None:intergenic | 45.0% | |
| TGACGTTTACTCTTGTGGAC+TGG | + | chr6_3:85585885-85585904 | Msa0962360:CDS | 45.0% | |
| AGATAAGCCTTTCTCCTCCA+AGG | + | chr6_3:85585954-85585973 | Msa0962360:CDS | 45.0% | |
| ! | GTACTGTTAGCTTGAAGCCA+GGG | + | chr6_3:85586103-85586122 | Msa0962360:CDS | 45.0% |
| GACAAACTCACACTCAGGTT+TGG | + | chr6_3:85586175-85586194 | Msa0962360:CDS | 45.0% | |
| ! | CTCAGGTTTGGGTTCGATTA+TGG | + | chr6_3:85586187-85586206 | Msa0962360:CDS | 45.0% |
| GGACCTTATATGAGATTGCC+GGG | + | chr6_3:85586238-85586257 | Msa0962360:CDS | 45.0% | |
| GACCTTATATGAGATTGCCG+GGG | + | chr6_3:85586239-85586258 | Msa0962360:CDS | 45.0% | |
| ATCCATGTCAACCAGAACTC+GGG | - | chr6_3:85586325-85586344 | None:intergenic | 45.0% | |
| GATCCATGTCAACCAGAACT+CGG | - | chr6_3:85586326-85586345 | None:intergenic | 45.0% | |
| GGTTGACATGGATCTTTCGA+AGG | + | chr6_3:85586332-85586351 | Msa0962360:CDS | 45.0% | |
| CCCATTGGCAATAGAGTATG+AGG | + | chr6_3:85586398-85586417 | Msa0962360:CDS | 45.0% | |
| CCCTCATACTCTATTGCCAA+TGG | - | chr6_3:85586402-85586421 | None:intergenic | 45.0% | |
| TCTTTCCCCTTACCATCAGA+AGG | - | chr6_3:85586519-85586538 | None:intergenic | 45.0% | |
| ! | TCAACGTGATTTGCATTCCG+CGG | + | chr6_3:85586707-85586726 | Msa0962360:CDS | 45.0% |
| CAGTGTCAATAAAGGAACCG+CGG | - | chr6_3:85586727-85586746 | None:intergenic | 45.0% | |
| GGAATAGAGATGTTCCCTTC+CGG | - | chr6_3:85586783-85586802 | None:intergenic | 45.0% | |
| GGAAGGGAACATCTCTATTC+CGG | + | chr6_3:85586782-85586801 | Msa0962360:CDS | 45.0% | |
| AAATGAGGACCAGTAGCAAC+CGG | - | chr6_3:85586819-85586838 | None:intergenic | 45.0% | |
| ATTGGAGCATGTTCATGTGC+AGG | + | chr6_3:85586842-85586861 | Msa0962360:CDS | 45.0% | |
| CTACTGCAGTTGAGTCTACA+AGG | - | chr6_3:85586884-85586903 | None:intergenic | 45.0% | |
| GTGGCAACCAATTGAACAGT+TGG | - | chr6_3:85586981-85587000 | None:intergenic | 45.0% | |
| GTTCAATTGGTTGCCACTGA+TGG | + | chr6_3:85586984-85587003 | Msa0962360:CDS | 45.0% | |
| CAGATTTGGAGGATGTCAAC+AGG | + | chr6_3:85587009-85587028 | Msa0962360:CDS | 45.0% | |
| CCTTCTTCACGGACAATTAC+GGG | - | chr6_3:85587035-85587054 | None:intergenic | 45.0% | |
| TCAAGGTCATGCTGAATACG+AGG | - | chr6_3:85587074-85587093 | None:intergenic | 45.0% | |
| ATGGACAGTGCCAAAGATCA+AGG | - | chr6_3:85587091-85587110 | None:intergenic | 45.0% | |
| ! | CGATATTGTTTGCTGCGTGT+TGG | - | chr6_3:85587121-85587140 | None:intergenic | 45.0% |
| TAACATGTTGCTGTACGGGA+GGG | - | chr6_3:85587178-85587197 | None:intergenic | 45.0% | |
| GTGCTAACATGTTGCTGTAC+GGG | - | chr6_3:85587182-85587201 | None:intergenic | 45.0% | |
| CGTGCTAACATGTTGCTGTA+CGG | - | chr6_3:85587183-85587202 | None:intergenic | 45.0% | |
| AACTCTGCCTGCCAGTCAAA+AGG | - | chr6_3:85585640-85585659 | None:intergenic | 50.0% | |
| !! | ATGGTGTTGTTTCCGGCAAG+GGG | - | chr6_3:85585663-85585682 | None:intergenic | 50.0% |
| GGTACTGTCATCAACAGCAG+CGG | + | chr6_3:85585705-85585724 | Msa0962360:CDS | 50.0% | |
| AGAGCTGTCAATGGAGCAGA+AGG | - | chr6_3:85585805-85585824 | None:intergenic | 50.0% | |
| TGCTCCATTGACAGCTCTCT+CGG | + | chr6_3:85585807-85585826 | Msa0962360:CDS | 50.0% | |
| AGCATGTCACCACGAATGGA+TGG | - | chr6_3:85585847-85585866 | None:intergenic | 50.0% | |
| GCAAAACCAACCTTAGAGGG+CGG | + | chr6_3:85585914-85585933 | Msa0962360:CDS | 50.0% | |
| !! | AACTAACCGCCCTCTAAGGT+TGG | - | chr6_3:85585923-85585942 | None:intergenic | 50.0% |
| TCAGAACTAACCGCCCTCTA+AGG | - | chr6_3:85585927-85585946 | None:intergenic | 50.0% | |
| !! | AGGGCGGTTAGTTCTGAACA+AGG | + | chr6_3:85585930-85585949 | Msa0962360:CDS | 50.0% |
| !! | GGGCGGTTAGTTCTGAACAA+GGG | + | chr6_3:85585931-85585950 | Msa0962360:CDS | 50.0% |
| TAACTTGGCAGCGAGATCCT+TGG | - | chr6_3:85585974-85585993 | None:intergenic | 50.0% | |
| TGTGGAAAGTGAAAGGGCCA+TGG | + | chr6_3:85586001-85586020 | Msa0962360:CDS | 50.0% | |
| CCAAGGGATGTAAGATGCCA+TGG | - | chr6_3:85586021-85586040 | None:intergenic | 50.0% | |
| CCATGGCATCTTACATCCCT+TGG | + | chr6_3:85586018-85586037 | Msa0962360:CDS | 50.0% | |
| TTCATAAAACCCCCGGCCAA+GGG | - | chr6_3:85586037-85586056 | None:intergenic | 50.0% | |
| ATTCATAAAACCCCCGGCCA+AGG | - | chr6_3:85586038-85586057 | None:intergenic | 50.0% | |
| AACAGTACCTGCTGCCCAAA+CGG | - | chr6_3:85586091-85586110 | None:intergenic | 50.0% | |
| ! | GGTACTGTTAGCTTGAAGCC+AGG | + | chr6_3:85586102-85586121 | Msa0962360:CDS | 50.0% |
| CTTATATGAGATTGCCGGGG+CGG | + | chr6_3:85586242-85586261 | Msa0962360:CDS | 50.0% | |
| ! | GAGATCATGGTGGAACGTGA+AGG | + | chr6_3:85586366-85586385 | Msa0962360:CDS | 50.0% |
| TCGGTGGTTGTACCCTAGAA+AGG | + | chr6_3:85586476-85586495 | Msa0962360:CDS | 50.0% | |
| CGCGGTTCCTTTATTGACAC+TGG | + | chr6_3:85586725-85586744 | Msa0962360:CDS | 50.0% | |
| ATAGAGATGTTCCCTTCCGG+AGG | - | chr6_3:85586780-85586799 | None:intergenic | 50.0% | |
| GCAACCGGAACATCAACAAC+CGG | - | chr6_3:85586804-85586823 | None:intergenic | 50.0% | |
| GTTGATGTTCCGGTTGCTAC+TGG | + | chr6_3:85586807-85586826 | Msa0962360:CDS | 50.0% | |
| TGACACACCAGTTTCCCTAC+AGG | + | chr6_3:85586905-85586924 | Msa0962360:CDS | 50.0% | |
| ! | TGCCACTGATGGTGCAGATT+TGG | + | chr6_3:85586995-85587014 | Msa0962360:CDS | 50.0% |
| CTCCAAATCTGCACCATCAG+TGG | - | chr6_3:85587000-85587019 | None:intergenic | 50.0% | |
| ! | CACTGATGGTGCAGATTTGG+AGG | + | chr6_3:85586998-85587017 | Msa0962360:CDS | 50.0% |
| CCCGTAATTGTCCGTGAAGA+AGG | + | chr6_3:85587032-85587051 | Msa0962360:CDS | 50.0% | |
| GCTGCGTGTTGGGATAAAGA+TGG | - | chr6_3:85587110-85587129 | None:intergenic | 50.0% | |
| CAATATCGCAGATGAGGCAG+AGG | + | chr6_3:85587133-85587152 | Msa0962360:CDS | 50.0% | |
| CTAACATGTTGCTGTACGGG+AGG | - | chr6_3:85587179-85587198 | None:intergenic | 50.0% | |
| GATCAACGAATGGCTGAGGA+AGG | + | chr6_3:85587248-85587267 | Msa0962360:CDS | 50.0% | |
| TCCTACCAAACCCGTGCAAA+GGG | + | chr6_3:85587332-85587351 | Msa0962360:CDS | 50.0% | |
| ATGGAAGACCACCCTTTGCA+CGG | - | chr6_3:85587346-85587365 | None:intergenic | 50.0% | |
| AACTCTGCCTGCCAGTCAAA+AGG | - | chr6_3:85585640-85585659 | None:intergenic | 50.0% | |
| !! | ATGGTGTTGTTTCCGGCAAG+GGG | - | chr6_3:85585663-85585682 | None:intergenic | 50.0% |
| GGTACTGTCATCAACAGCAG+CGG | + | chr6_3:85585705-85585724 | Msa0962360:CDS | 50.0% | |
| AGAGCTGTCAATGGAGCAGA+AGG | - | chr6_3:85585805-85585824 | None:intergenic | 50.0% | |
| TGCTCCATTGACAGCTCTCT+CGG | + | chr6_3:85585807-85585826 | Msa0962360:CDS | 50.0% | |
| AGCATGTCACCACGAATGGA+TGG | - | chr6_3:85585847-85585866 | None:intergenic | 50.0% | |
| GCAAAACCAACCTTAGAGGG+CGG | + | chr6_3:85585914-85585933 | Msa0962360:CDS | 50.0% | |
| !! | AACTAACCGCCCTCTAAGGT+TGG | - | chr6_3:85585923-85585942 | None:intergenic | 50.0% |
| TCAGAACTAACCGCCCTCTA+AGG | - | chr6_3:85585927-85585946 | None:intergenic | 50.0% | |
| !! | AGGGCGGTTAGTTCTGAACA+AGG | + | chr6_3:85585930-85585949 | Msa0962360:CDS | 50.0% |
| !! | GGGCGGTTAGTTCTGAACAA+GGG | + | chr6_3:85585931-85585950 | Msa0962360:CDS | 50.0% |
| TAACTTGGCAGCGAGATCCT+TGG | - | chr6_3:85585974-85585993 | None:intergenic | 50.0% | |
| TGTGGAAAGTGAAAGGGCCA+TGG | + | chr6_3:85586001-85586020 | Msa0962360:CDS | 50.0% | |
| CCAAGGGATGTAAGATGCCA+TGG | - | chr6_3:85586021-85586040 | None:intergenic | 50.0% | |
| CCATGGCATCTTACATCCCT+TGG | + | chr6_3:85586018-85586037 | Msa0962360:CDS | 50.0% | |
| TTCATAAAACCCCCGGCCAA+GGG | - | chr6_3:85586037-85586056 | None:intergenic | 50.0% | |
| ATTCATAAAACCCCCGGCCA+AGG | - | chr6_3:85586038-85586057 | None:intergenic | 50.0% | |
| AACAGTACCTGCTGCCCAAA+CGG | - | chr6_3:85586091-85586110 | None:intergenic | 50.0% | |
| ! | GGTACTGTTAGCTTGAAGCC+AGG | + | chr6_3:85586102-85586121 | Msa0962360:CDS | 50.0% |
| CTTATATGAGATTGCCGGGG+CGG | + | chr6_3:85586242-85586261 | Msa0962360:CDS | 50.0% | |
| ! | GAGATCATGGTGGAACGTGA+AGG | + | chr6_3:85586366-85586385 | Msa0962360:CDS | 50.0% |
| TCGGTGGTTGTACCCTAGAA+AGG | + | chr6_3:85586476-85586495 | Msa0962360:CDS | 50.0% | |
| CGCGGTTCCTTTATTGACAC+TGG | + | chr6_3:85586725-85586744 | Msa0962360:CDS | 50.0% | |
| ATAGAGATGTTCCCTTCCGG+AGG | - | chr6_3:85586780-85586799 | None:intergenic | 50.0% | |
| GCAACCGGAACATCAACAAC+CGG | - | chr6_3:85586804-85586823 | None:intergenic | 50.0% | |
| GTTGATGTTCCGGTTGCTAC+TGG | + | chr6_3:85586807-85586826 | Msa0962360:CDS | 50.0% | |
| TGACACACCAGTTTCCCTAC+AGG | + | chr6_3:85586905-85586924 | Msa0962360:CDS | 50.0% | |
| ! | TGCCACTGATGGTGCAGATT+TGG | + | chr6_3:85586995-85587014 | Msa0962360:CDS | 50.0% |
| CTCCAAATCTGCACCATCAG+TGG | - | chr6_3:85587000-85587019 | None:intergenic | 50.0% | |
| ! | CACTGATGGTGCAGATTTGG+AGG | + | chr6_3:85586998-85587017 | Msa0962360:CDS | 50.0% |
| CCCGTAATTGTCCGTGAAGA+AGG | + | chr6_3:85587032-85587051 | Msa0962360:CDS | 50.0% | |
| GCTGCGTGTTGGGATAAAGA+TGG | - | chr6_3:85587110-85587129 | None:intergenic | 50.0% | |
| CAATATCGCAGATGAGGCAG+AGG | + | chr6_3:85587133-85587152 | Msa0962360:CDS | 50.0% | |
| CTAACATGTTGCTGTACGGG+AGG | - | chr6_3:85587179-85587198 | None:intergenic | 50.0% | |
| GATCAACGAATGGCTGAGGA+AGG | + | chr6_3:85587248-85587267 | Msa0962360:CDS | 50.0% | |
| TCCTACCAAACCCGTGCAAA+GGG | + | chr6_3:85587332-85587351 | Msa0962360:CDS | 50.0% | |
| ATGGAAGACCACCCTTTGCA+CGG | - | chr6_3:85587346-85587365 | None:intergenic | 50.0% | |
| TTCCACCAGAGCCTGAGCAA+AGG | - | chr6_3:85585758-85585777 | None:intergenic | 55.0% | |
| CAATGGAGCAGAAGGAACGG+CGG | - | chr6_3:85585797-85585816 | None:intergenic | 55.0% | |
| ! | ACGAATGGATGGCACCGGAA+GGG | - | chr6_3:85585836-85585855 | None:intergenic | 55.0% |
| TCACCACGAATGGATGGCAC+CGG | - | chr6_3:85585841-85585860 | None:intergenic | 55.0% | |
| GCGAGATCCTTGGAGGAGAA+AGG | - | chr6_3:85585964-85585983 | None:intergenic | 55.0% | |
| GGCATCTTACATCCCTTGGC+CGG | + | chr6_3:85586022-85586041 | Msa0962360:CDS | 55.0% | |
| GCATCTTACATCCCTTGGCC+GGG | + | chr6_3:85586023-85586042 | Msa0962360:CDS | 55.0% | |
| CATCTTACATCCCTTGGCCG+GGG | + | chr6_3:85586024-85586043 | Msa0962360:CDS | 55.0% | |
| ATCTTACATCCCTTGGCCGG+GGG | + | chr6_3:85586025-85586044 | Msa0962360:CDS | 55.0% | |
| AAGAGAACCGTTTGGGCAGC+AGG | + | chr6_3:85586081-85586100 | Msa0962360:CDS | 55.0% | |
| ! | GCACCGACAAACTCACACTC+AGG | + | chr6_3:85586170-85586189 | Msa0962360:CDS | 55.0% |
| CGCCCCGGCAATCTCATATA+AGG | - | chr6_3:85586244-85586263 | None:intergenic | 55.0% | |
| CGGTCATTATGCCCGAGTTC+TGG | + | chr6_3:85586311-85586330 | Msa0962360:CDS | 55.0% | |
| ! | TGCCCGAGTTCTGGTTGACA+TGG | + | chr6_3:85586320-85586339 | Msa0962360:CDS | 55.0% |
| ACCTGAGTGGATGCCGTTGA+AGG | + | chr6_3:85586557-85586576 | Msa0962360:CDS | 55.0% | |
| TCCTTCAACGGCATCCACTC+AGG | - | chr6_3:85586561-85586580 | None:intergenic | 55.0% | |
| CCGGAAGGGTTGTCCTTCAA+CGG | - | chr6_3:85586573-85586592 | None:intergenic | 55.0% | |
| CCGTTGAAGGACAACCCTTC+CGG | + | chr6_3:85586570-85586589 | Msa0962360:CDS | 55.0% | |
| AAGGACAACCCTTCCGGAAC+AGG | + | chr6_3:85586576-85586595 | Msa0962360:CDS | 55.0% | |
| TGGGGTTTCAAAGGCCTTGG+AGG | - | chr6_3:85586604-85586623 | None:intergenic | 55.0% | |
| AGGTGGGGTTTCAAAGGCCT+TGG | - | chr6_3:85586607-85586626 | None:intergenic | 55.0% | |
| CGCAGTAGGTGGGGTTTCAA+AGG | - | chr6_3:85586613-85586632 | None:intergenic | 55.0% | |
| ACAGGATGCTGCCATACCTC+CGG | + | chr6_3:85586761-85586780 | Msa0962360:CDS | 55.0% | |
| ATGCTGCCATACCTCCGGAA+GGG | + | chr6_3:85586766-85586785 | Msa0962360:CDS | 55.0% | |
| GATGTTCCCTTCCGGAGGTA+TGG | - | chr6_3:85586775-85586794 | None:intergenic | 55.0% | |
| GGAGCATGTTCATGTGCAGG+AGG | + | chr6_3:85586845-85586864 | Msa0962360:CDS | 55.0% | |
| TGTACCTGCAGAGGCCTGTA+GGG | - | chr6_3:85586922-85586941 | None:intergenic | 55.0% | |
| ! | ACGAGTTTGCTTCTGCGCCT+TGG | - | chr6_3:85587291-85587310 | None:intergenic | 55.0% |
| GTCCTACCAAACCCGTGCAA+AGG | + | chr6_3:85587331-85587350 | Msa0962360:CDS | 55.0% | |
| ! | ACCCTTTGCACGGGTTTGGT+AGG | - | chr6_3:85587336-85587355 | None:intergenic | 55.0% |
| TACCAAACCCGTGCAAAGGG+TGG | + | chr6_3:85587335-85587354 | Msa0962360:CDS | 55.0% | |
| TGGAAGACCACCCTTTGCAC+GGG | - | chr6_3:85587345-85587364 | None:intergenic | 55.0% | |
| TTCCACCAGAGCCTGAGCAA+AGG | - | chr6_3:85585758-85585777 | None:intergenic | 55.0% | |
| CAATGGAGCAGAAGGAACGG+CGG | - | chr6_3:85585797-85585816 | None:intergenic | 55.0% | |
| ! | ACGAATGGATGGCACCGGAA+GGG | - | chr6_3:85585836-85585855 | None:intergenic | 55.0% |
| TCACCACGAATGGATGGCAC+CGG | - | chr6_3:85585841-85585860 | None:intergenic | 55.0% | |
| GCGAGATCCTTGGAGGAGAA+AGG | - | chr6_3:85585964-85585983 | None:intergenic | 55.0% | |
| GGCATCTTACATCCCTTGGC+CGG | + | chr6_3:85586022-85586041 | Msa0962360:CDS | 55.0% | |
| GCATCTTACATCCCTTGGCC+GGG | + | chr6_3:85586023-85586042 | Msa0962360:CDS | 55.0% | |
| CATCTTACATCCCTTGGCCG+GGG | + | chr6_3:85586024-85586043 | Msa0962360:CDS | 55.0% | |
| ATCTTACATCCCTTGGCCGG+GGG | + | chr6_3:85586025-85586044 | Msa0962360:CDS | 55.0% | |
| AAGAGAACCGTTTGGGCAGC+AGG | + | chr6_3:85586081-85586100 | Msa0962360:CDS | 55.0% | |
| ! | GCACCGACAAACTCACACTC+AGG | + | chr6_3:85586170-85586189 | Msa0962360:CDS | 55.0% |
| CGCCCCGGCAATCTCATATA+AGG | - | chr6_3:85586244-85586263 | None:intergenic | 55.0% | |
| CGGTCATTATGCCCGAGTTC+TGG | + | chr6_3:85586311-85586330 | Msa0962360:CDS | 55.0% | |
| ! | TGCCCGAGTTCTGGTTGACA+TGG | + | chr6_3:85586320-85586339 | Msa0962360:CDS | 55.0% |
| ACCTGAGTGGATGCCGTTGA+AGG | + | chr6_3:85586557-85586576 | Msa0962360:CDS | 55.0% | |
| TCCTTCAACGGCATCCACTC+AGG | - | chr6_3:85586561-85586580 | None:intergenic | 55.0% | |
| CCGGAAGGGTTGTCCTTCAA+CGG | - | chr6_3:85586573-85586592 | None:intergenic | 55.0% | |
| CCGTTGAAGGACAACCCTTC+CGG | + | chr6_3:85586570-85586589 | Msa0962360:CDS | 55.0% | |
| AAGGACAACCCTTCCGGAAC+AGG | + | chr6_3:85586576-85586595 | Msa0962360:CDS | 55.0% | |
| TGGGGTTTCAAAGGCCTTGG+AGG | - | chr6_3:85586604-85586623 | None:intergenic | 55.0% | |
| AGGTGGGGTTTCAAAGGCCT+TGG | - | chr6_3:85586607-85586626 | None:intergenic | 55.0% | |
| CGCAGTAGGTGGGGTTTCAA+AGG | - | chr6_3:85586613-85586632 | None:intergenic | 55.0% | |
| ACAGGATGCTGCCATACCTC+CGG | + | chr6_3:85586761-85586780 | Msa0962360:CDS | 55.0% | |
| ATGCTGCCATACCTCCGGAA+GGG | + | chr6_3:85586766-85586785 | Msa0962360:CDS | 55.0% | |
| GATGTTCCCTTCCGGAGGTA+TGG | - | chr6_3:85586775-85586794 | None:intergenic | 55.0% | |
| GGAGCATGTTCATGTGCAGG+AGG | + | chr6_3:85586845-85586864 | Msa0962360:CDS | 55.0% | |
| TGTACCTGCAGAGGCCTGTA+GGG | - | chr6_3:85586922-85586941 | None:intergenic | 55.0% | |
| ! | ACGAGTTTGCTTCTGCGCCT+TGG | - | chr6_3:85587291-85587310 | None:intergenic | 55.0% |
| GTCCTACCAAACCCGTGCAA+AGG | + | chr6_3:85587331-85587350 | Msa0962360:CDS | 55.0% | |
| ! | ACCCTTTGCACGGGTTTGGT+AGG | - | chr6_3:85587336-85587355 | None:intergenic | 55.0% |
| TACCAAACCCGTGCAAAGGG+TGG | + | chr6_3:85587335-85587354 | Msa0962360:CDS | 55.0% | |
| TGGAAGACCACCCTTTGCAC+GGG | - | chr6_3:85587345-85587364 | None:intergenic | 55.0% | |
| AGAGCCTGAGCAAAGGACCG+CGG | - | chr6_3:85585751-85585770 | None:intergenic | 60.0% | |
| ! | GTCCTTTGCTCAGGCTCTGG+TGG | + | chr6_3:85585753-85585772 | Msa0962360:CDS | 60.0% |
| GGGTCCGAGAGAGCTGTCAA+TGG | - | chr6_3:85585814-85585833 | None:intergenic | 60.0% | |
| ! | GAATGGATGGCACCGGAAGG+GGG | - | chr6_3:85585834-85585853 | None:intergenic | 60.0% |
| ! | CGAATGGATGGCACCGGAAG+GGG | - | chr6_3:85585835-85585854 | None:intergenic | 60.0% |
| ! | CACGAATGGATGGCACCGGA+AGG | - | chr6_3:85585837-85585856 | None:intergenic | 60.0% |
| !! | CTTCCGGTGCCATCCATTCG+TGG | + | chr6_3:85585835-85585854 | Msa0962360:CDS | 60.0% |
| CTTGGCAGCGAGATCCTTGG+AGG | - | chr6_3:85585971-85585990 | None:intergenic | 60.0% | |
| TATGAGATTGCCGGGGCGGT+AGG | + | chr6_3:85586246-85586265 | Msa0962360:CDS | 60.0% | |
| ATGAGATTGCCGGGGCGGTA+GGG | + | chr6_3:85586247-85586266 | Msa0962360:CDS | 60.0% | |
| TGGAGGAGCCTGTTCCGGAA+GGG | - | chr6_3:85586587-85586606 | None:intergenic | 60.0% | |
| TTGGAGGAGCCTGTTCCGGA+AGG | - | chr6_3:85586588-85586607 | None:intergenic | 60.0% | |
| TTCCGGAACAGGCTCCTCCA+AGG | + | chr6_3:85586587-85586606 | Msa0962360:CDS | 60.0% | |
| CAAAGGCTGCGCAGTAGGTG+GGG | - | chr6_3:85586622-85586641 | None:intergenic | 60.0% | |
| CCAAAGGCTGCGCAGTAGGT+GGG | - | chr6_3:85586623-85586642 | None:intergenic | 60.0% | |
| ACCAAAGGCTGCGCAGTAGG+TGG | - | chr6_3:85586624-85586643 | None:intergenic | 60.0% | |
| ACCTACTGCGCAGCCTTTGG+TGG | + | chr6_3:85586623-85586642 | Msa0962360:CDS | 60.0% | |
| GATGCTGCCATACCTCCGGA+AGG | + | chr6_3:85586765-85586784 | Msa0962360:CDS | 60.0% | |
| GCAGAGGCCTGTAGGGAAAC+TGG | - | chr6_3:85586915-85586934 | None:intergenic | 60.0% | |
| GTTTCCCTACAGGCCTCTGC+AGG | + | chr6_3:85586915-85586934 | Msa0962360:CDS | 60.0% | |
| CTGTACCTGCAGAGGCCTGT+AGG | - | chr6_3:85586923-85586942 | None:intergenic | 60.0% | |
| ATCAGCGGCTGTACCTGCAG+AGG | - | chr6_3:85586931-85586950 | None:intergenic | 60.0% | |
| ! | GGGTTTGGTAGGACGTGCCA+AGG | - | chr6_3:85587325-85587344 | None:intergenic | 60.0% |
| GACCACCCTTTGCACGGGTT+TGG | - | chr6_3:85587340-85587359 | None:intergenic | 60.0% | |
| AGAGCCTGAGCAAAGGACCG+CGG | - | chr6_3:85585751-85585770 | None:intergenic | 60.0% | |
| ! | GTCCTTTGCTCAGGCTCTGG+TGG | + | chr6_3:85585753-85585772 | Msa0962360:CDS | 60.0% |
| GGGTCCGAGAGAGCTGTCAA+TGG | - | chr6_3:85585814-85585833 | None:intergenic | 60.0% | |
| ! | GAATGGATGGCACCGGAAGG+GGG | - | chr6_3:85585834-85585853 | None:intergenic | 60.0% |
| ! | CGAATGGATGGCACCGGAAG+GGG | - | chr6_3:85585835-85585854 | None:intergenic | 60.0% |
| ! | CACGAATGGATGGCACCGGA+AGG | - | chr6_3:85585837-85585856 | None:intergenic | 60.0% |
| !! | CTTCCGGTGCCATCCATTCG+TGG | + | chr6_3:85585835-85585854 | Msa0962360:CDS | 60.0% |
| CTTGGCAGCGAGATCCTTGG+AGG | - | chr6_3:85585971-85585990 | None:intergenic | 60.0% | |
| TATGAGATTGCCGGGGCGGT+AGG | + | chr6_3:85586246-85586265 | Msa0962360:CDS | 60.0% | |
| ATGAGATTGCCGGGGCGGTA+GGG | + | chr6_3:85586247-85586266 | Msa0962360:CDS | 60.0% | |
| TGGAGGAGCCTGTTCCGGAA+GGG | - | chr6_3:85586587-85586606 | None:intergenic | 60.0% | |
| TTGGAGGAGCCTGTTCCGGA+AGG | - | chr6_3:85586588-85586607 | None:intergenic | 60.0% | |
| TTCCGGAACAGGCTCCTCCA+AGG | + | chr6_3:85586587-85586606 | Msa0962360:CDS | 60.0% | |
| CAAAGGCTGCGCAGTAGGTG+GGG | - | chr6_3:85586622-85586641 | None:intergenic | 60.0% | |
| CCAAAGGCTGCGCAGTAGGT+GGG | - | chr6_3:85586623-85586642 | None:intergenic | 60.0% | |
| ACCAAAGGCTGCGCAGTAGG+TGG | - | chr6_3:85586624-85586643 | None:intergenic | 60.0% | |
| ACCTACTGCGCAGCCTTTGG+TGG | + | chr6_3:85586623-85586642 | Msa0962360:CDS | 60.0% | |
| GATGCTGCCATACCTCCGGA+AGG | + | chr6_3:85586765-85586784 | Msa0962360:CDS | 60.0% | |
| GCAGAGGCCTGTAGGGAAAC+TGG | - | chr6_3:85586915-85586934 | None:intergenic | 60.0% | |
| GTTTCCCTACAGGCCTCTGC+AGG | + | chr6_3:85586915-85586934 | Msa0962360:CDS | 60.0% | |
| CTGTACCTGCAGAGGCCTGT+AGG | - | chr6_3:85586923-85586942 | None:intergenic | 60.0% | |
| ATCAGCGGCTGTACCTGCAG+AGG | - | chr6_3:85586931-85586950 | None:intergenic | 60.0% | |
| ! | GGGTTTGGTAGGACGTGCCA+AGG | - | chr6_3:85587325-85587344 | None:intergenic | 60.0% |
| GACCACCCTTTGCACGGGTT+TGG | - | chr6_3:85587340-85587359 | None:intergenic | 60.0% | |
| GCAGGCAGAGTTCCCCTTGC+CGG | + | chr6_3:85585648-85585667 | Msa0962360:CDS | 65.0% | |
| CATCACCTACACCACCGCCG+CGG | + | chr6_3:85585731-85585750 | Msa0962360:CDS | 65.0% | |
| GCGGTCCTTTGCTCAGGCTC+TGG | + | chr6_3:85585750-85585769 | Msa0962360:CDS | 65.0% | |
| AGCTCTCTCGGACCCCCTTC+CGG | + | chr6_3:85585819-85585838 | Msa0962360:CDS | 65.0% | |
| TAACGGAGTCCCTACCGCCC+CGG | - | chr6_3:85586259-85586278 | None:intergenic | 65.0% | |
| GGCCTTGGAGGAGCCTGTTC+CGG | - | chr6_3:85586592-85586611 | None:intergenic | 65.0% | |
| CCCACCTACTGCGCAGCCTT+TGG | + | chr6_3:85586620-85586639 | Msa0962360:CDS | 65.0% | |
| GCCACCAAAGGCTGCGCAGT+AGG | - | chr6_3:85586627-85586646 | None:intergenic | 65.0% | |
| GCAGGCAGAGTTCCCCTTGC+CGG | + | chr6_3:85585648-85585667 | Msa0962360:CDS | 65.0% | |
| CATCACCTACACCACCGCCG+CGG | + | chr6_3:85585731-85585750 | Msa0962360:CDS | 65.0% | |
| GCGGTCCTTTGCTCAGGCTC+TGG | + | chr6_3:85585750-85585769 | Msa0962360:CDS | 65.0% | |
| AGCTCTCTCGGACCCCCTTC+CGG | + | chr6_3:85585819-85585838 | Msa0962360:CDS | 65.0% | |
| TAACGGAGTCCCTACCGCCC+CGG | - | chr6_3:85586259-85586278 | None:intergenic | 65.0% | |
| GGCCTTGGAGGAGCCTGTTC+CGG | - | chr6_3:85586592-85586611 | None:intergenic | 65.0% | |
| CCCACCTACTGCGCAGCCTT+TGG | + | chr6_3:85586620-85586639 | Msa0962360:CDS | 65.0% | |
| GCCACCAAAGGCTGCGCAGT+AGG | - | chr6_3:85586627-85586646 | None:intergenic | 65.0% | |
| AAGGACCGCGGCGGTGGTGT+AGG | - | chr6_3:85585739-85585758 | None:intergenic | 70.0% | |
| TGAGCAAAGGACCGCGGCGG+TGG | - | chr6_3:85585745-85585764 | None:intergenic | 70.0% | |
| ACCGCCGCGGTCCTTTGCTC+AGG | + | chr6_3:85585744-85585763 | Msa0962360:CDS | 70.0% | |
| GCCTGAGCAAAGGACCGCGG+CGG | - | chr6_3:85585748-85585767 | None:intergenic | 70.0% | |
| AAGGACCGCGGCGGTGGTGT+AGG | - | chr6_3:85585739-85585758 | None:intergenic | 70.0% | |
| TGAGCAAAGGACCGCGGCGG+TGG | - | chr6_3:85585745-85585764 | None:intergenic | 70.0% | |
| ACCGCCGCGGTCCTTTGCTC+AGG | + | chr6_3:85585744-85585763 | Msa0962360:CDS | 70.0% | |
| GCCTGAGCAAAGGACCGCGG+CGG | - | chr6_3:85585748-85585767 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 85585634 | 85587376 | 85585634 | ID=Msa0962360;Name=Msa0962360 |
| chr6_3 | mRNA | 85585634 | 85587376 | 85585634 | ID=Msa0962360-mRNA-1;Parent=Msa0962360;Name=Msa0962360-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|-1|0|1|-1|1|1|0|580 |
| chr6_3 | exon | 85585634 | 85587376 | 85585634 | ID=Msa0962360-mRNA-1:exon:15351;Parent=Msa0962360-mRNA-1 |
| chr6_3 | CDS | 85585634 | 85587376 | 85585634 | ID=Msa0962360-mRNA-1:cds;Parent=Msa0962360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
