AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0970920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0970920 MtrunA17_Chr6g0449871 97.122 973 27 1 1 972 1 973 0.0 1930
Msa0970920 MtrunA17_Chr7g0254071 34.492 777 443 14 21 741 66 832 1.54e-126 406
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0970920 AT5G14580.1 61.100 982 336 11 19 972 25 988 0.0 1165
Msa0970920 AT3G03710.1 35.302 745 423 11 51 741 95 834 3.47e-124 400
Msa0970920 AT3G61620.2 26.016 246 162 6 353 596 7 234 4.79e-14 73.6
Msa0970920 AT3G61620.1 26.016 246 162 6 353 596 7 234 4.79e-14 73.6

Find 245 sgRNAs with CRISPR-Local

Find 802 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGCAACATGTTCCCTTAT+TGG 0.139326 6_4:+2577542 None:intergenic
CCGTATACTGACTGATATTT+TGG 0.178442 6_4:-2577462 Msa0970920:intron
TATTGATCGATTGATGTTAT+TGG 0.194210 6_4:+2572188 None:intergenic
GACGCTCTTCGTCGCTTAAT+TGG 0.215599 6_4:-2576653 Msa0970920:CDS
CATTGATAATGGGGTAAAAT+TGG 0.217433 6_4:-2573133 Msa0970920:CDS
ATTTAACGTTCGCCGGAAAA+TGG 0.230335 6_4:+2583223 None:intergenic
CAAATGTATGTTTATAATAA+TGG 0.268551 6_4:+2571964 None:intergenic
TCCAATAAAATTATTGATCT+TGG 0.272543 6_4:+2572229 None:intergenic
ATCCATTACAGATTGATTCT+TGG 0.289491 6_4:+2574133 None:intergenic
AATGGTCCTCTCATTGATAA+TGG 0.293792 6_4:-2573144 Msa0970920:CDS
CATTATTATAAACATACATT+TGG 0.295650 6_4:-2571963 Msa0970920:three_prime_UTR
CAGCTGTAAGAATTCCTTCC+AGG 0.307904 6_4:+2572257 None:intergenic
GTCACCTCTATAAAAGAATA+TGG 0.312047 6_4:-2573723 Msa0970920:CDS
CTTTCTGTTTGCAGCGAGTA+TGG 0.320678 6_4:-2577585 Msa0970920:intron
ACTGGAGAAAGTCAGTAATT+TGG 0.325474 6_4:-2579568 Msa0970920:CDS
CCAACAGTTGGGCACCAGTT+TGG 0.333895 6_4:-2573341 Msa0970920:CDS
TGAATGCCGGCATTCCAATA+AGG 0.335781 6_4:-2577556 Msa0970920:CDS
GAGTTAACACGAACAGTATA+TGG 0.339458 6_4:+2577729 None:intergenic
GAAGGGCTTGGAAGACCATT+TGG 0.340755 6_4:-2577009 Msa0970920:intron
ATGGTCCTCTCATTGATAAT+GGG 0.343138 6_4:-2573143 Msa0970920:CDS
GTATTACAATTACTGGTGTT+TGG 0.344421 6_4:+2573229 None:intergenic
CCAAAATATCAGTCAGTATA+CGG 0.352949 6_4:+2577462 None:intergenic
TATTACAATTACTGGTGTTT+GGG 0.354658 6_4:+2573230 None:intergenic
CGATCAATATAACCAACTTC+CGG 0.361745 6_4:-2572174 Msa0970920:three_prime_UTR
GGAAACGTGGTGGTCTAAAT+AGG 0.362289 6_4:-2578097 Msa0970920:CDS
TACTGGTGTTTGGGAGGCTG+AGG 0.367448 6_4:+2573239 None:intergenic
TCCGGCGACGGCGATGGTTC+AGG 0.372188 6_4:-2583106 Msa0970920:CDS
CAACAGTTGGGCACCAGTTT+GGG 0.374325 6_4:-2573340 Msa0970920:CDS
TGTGATCAATAATGTGTAGA+TGG 0.377523 6_4:+2576865 None:intergenic
GGCAGTTCTTCTCAACAAAT+AGG 0.378731 6_4:-2576807 Msa0970920:intron
ACATGGGTTAGTGTTAGATT+TGG 0.379311 6_4:-2572872 Msa0970920:CDS
TCCAAGTGTTGAGCGTCTTT+AGG 0.379542 6_4:+2578194 None:intergenic
AGAGACTATGTCTGAAATCT+TGG 0.380038 6_4:+2573509 None:intergenic
AGGAGTTACTGCCGCTCAAT+TGG 0.386786 6_4:-2576952 Msa0970920:CDS
GCACTGCGTATTACAATTAC+TGG 0.394724 6_4:+2573222 None:intergenic
GCAGGGCCTTCTCCACATTT+CGG 0.395372 6_4:-2573673 Msa0970920:CDS
CATGGGTTAGTGTTAGATTT+GGG 0.395389 6_4:-2572871 Msa0970920:CDS
CAGCTTTCTTTGATGTGCAT+TGG 0.395578 6_4:-2573477 Msa0970920:CDS
GACATAGACTTCAAGATTGC+TGG 0.400556 6_4:-2576984 Msa0970920:CDS
TCAGTGAAAACAGCTTTAAT+AGG 0.407144 6_4:+2579537 None:intergenic
TTGTCAGGTTGTTTCTATAG+TGG 0.408871 6_4:-2573784 Msa0970920:intron
TTATGTTATCAGATATTCCT+TGG 0.409881 6_4:-2580821 Msa0970920:CDS
ATTATTATAAACATACATTT+GGG 0.410807 6_4:-2571962 Msa0970920:three_prime_UTR
CCCTACTGCATAGGTGAAGT+TGG 0.411035 6_4:-2578119 Msa0970920:CDS
TACCTCCAACTTCAATTTCA+CGG 0.413554 6_4:+2573760 None:intergenic
ACGCTCTTCGTCGCTTAATT+GGG 0.413657 6_4:-2576652 Msa0970920:CDS
CAACACTTGGACTCTTTAGT+TGG 0.413901 6_4:-2578182 Msa0970920:CDS
AGGAGATGAAGAAAGCATAA+AGG 0.417856 6_4:-2579332 Msa0970920:CDS
TCTCTTCTCATGTACGTAGA+AGG 0.419119 6_4:+2581091 None:intergenic
ATTCGACCTCTGTTTCCAAC+TGG 0.425008 6_4:-2581016 Msa0970920:CDS
TAATGTTACCATGAACATCT+TGG 0.425440 6_4:+2573454 None:intergenic
ATCTTGGTGGTCTACGTCCA+TGG 0.425534 6_4:+2572288 None:intergenic
ATTGCGAGCAATTTCATCTC+TGG 0.426293 6_4:+2582937 None:intergenic
ACCGATTCGAATCATTCCTA+TGG 0.428562 6_4:+2580791 None:intergenic
GGAAGATAACAAAATCATTT+CGG 0.429946 6_4:-2582972 Msa0970920:CDS
TTCGGAGTTATCACATGAAC+CGG 0.430847 6_4:-2573655 Msa0970920:intron
TATGTTATCAGATATTCCTT+GGG 0.432885 6_4:-2580820 Msa0970920:CDS
AAGGGCTTGGAAGACCATTT+GGG 0.433430 6_4:-2577008 Msa0970920:CDS
GATCAATATAACCAACTTCC+GGG 0.433889 6_4:-2572173 Msa0970920:three_prime_UTR
ATAATTAGTCTCTGATCCTC+CGG 0.435612 6_4:+2573401 None:intergenic
GAATGCCGGCATTCCAATAA+GGG 0.440394 6_4:-2577555 Msa0970920:CDS
TTCGAATCGGTAGGATTTGT+GGG 0.441995 6_4:-2580779 Msa0970920:CDS
TGTTCTGTATTGCAGGGAGA+TGG 0.442268 6_4:-2572438 Msa0970920:intron
ACATTTCAAACCGGAAAATA+CGG 0.444403 6_4:-2583028 Msa0970920:CDS
CCAATAAGGGAACATGTTGC+TGG 0.448048 6_4:-2577542 Msa0970920:CDS
CTTCCAGGCCATCATCATCT+TGG 0.449569 6_4:+2572272 None:intergenic
CATCATTCAATCATACATTC+AGG 0.452490 6_4:+2571923 None:intergenic
AAATACGGTCGTTTCTCAAA+TGG 0.453172 6_4:-2583013 Msa0970920:CDS
TGTCAGGTTGTTTCTATAGT+GGG 0.454979 6_4:-2573783 Msa0970920:intron
ATTCGAATCGGTAGGATTTG+TGG 0.455376 6_4:-2580780 Msa0970920:CDS
TTAGTGTTAGATTTGGGTGG+AGG 0.457807 6_4:-2572865 Msa0970920:CDS
CGTCGCTTAATTGGGCCAAT+GGG 0.457872 6_4:-2576644 Msa0970920:CDS
TGAATTTAATGGTGGCAAGC+AGG 0.458285 6_4:-2573691 Msa0970920:CDS
GATCACAATCAAACTTCAAA+TGG 0.459164 6_4:-2573162 Msa0970920:CDS
AAGAAAGTGCTTGAAGAAGA+AGG 0.462181 6_4:-2579352 Msa0970920:CDS
CTCTAAGACTCATTCGCCTA+TGG 0.462413 6_4:+2572048 None:intergenic
AAGATTGCTGGAACTCGAAA+AGG 0.462985 6_4:-2576972 Msa0970920:CDS
GCATCCAGCTTCGCAGTACA+AGG 0.465819 6_4:+2578420 None:intergenic
TCGTCGCTTAATTGGGCCAA+TGG 0.467286 6_4:-2576645 Msa0970920:CDS
ATCTGCAGATCCACGCAGCT+TGG 0.467744 6_4:+2578393 None:intergenic
CACTGATCCTTCTTATGGAA+AGG 0.468337 6_4:-2579520 Msa0970920:intron
CACAAAAGTTCGCGTTCCTT+AGG 0.468924 6_4:+2581061 None:intergenic
CATTATTGATCACATGGAAC+GGG 0.470713 6_4:-2576856 Msa0970920:CDS
AGCAAATATATCCCGGAAGT+TGG 0.470829 6_4:+2572162 None:intergenic
TTGAACTGCTGGGCATGCCT+TGG 0.471008 6_4:-2572130 Msa0970920:three_prime_UTR
GTTGGAAACAGAGGTCGAAT+AGG 0.471755 6_4:+2581019 None:intergenic
TAGGATTTGTGGGCAGTTTG+TGG 0.471884 6_4:-2580769 Msa0970920:CDS
ACTGGTGTTTGGGAGGCTGA+GGG 0.471968 6_4:+2573240 None:intergenic
AGACCCTTGTACTGCGAAGC+TGG 0.474955 6_4:-2578424 Msa0970920:CDS
CCAGGCCATCATCATCTTGG+TGG 0.478046 6_4:+2572275 None:intergenic
ATTAGACTTGCTGCTAAAGC+TGG 0.479636 6_4:-2579636 Msa0970920:CDS
AATGGATAAAACACTAGAAA+AGG 0.480985 6_4:-2574117 Msa0970920:intron
GCAGAAGGATCCAGAGTTGA+TGG 0.481054 6_4:-2578466 Msa0970920:CDS
TACCAAGAATCAATCTGTAA+TGG 0.481885 6_4:-2574135 Msa0970920:CDS
TCCTGAACCATCGCCGTCGC+CGG 0.482282 6_4:+2583105 None:intergenic
AAAGCGGCTTTGCGTGGTCC+CGG 0.482324 6_4:-2573420 Msa0970920:CDS
ACCACGCAAAGCCGCTTTGA+GGG 0.484977 6_4:+2573425 None:intergenic
TCCGCTATTTCGCCTGTGCA+TGG 0.485644 6_4:+2577488 None:intergenic
GATTTGGGTGGAGGAGTTCG+AGG 0.487837 6_4:-2572856 Msa0970920:CDS
AATGAGTCTTAGAGATTGAA+TGG 0.488705 6_4:-2572039 Msa0970920:three_prime_UTR
TGGATTAAGATTTGCTCATC+CGG 0.489172 6_4:-2579761 Msa0970920:CDS
ATGTTCCCTTATTGGAATGC+CGG 0.489967 6_4:+2577550 None:intergenic
CATGTTGCTGGTATTTCTGT+GGG 0.491570 6_4:-2577530 Msa0970920:CDS
TTAGCAGCAAGTCTAATTTG+AGG 0.497754 6_4:+2579642 None:intergenic
AGATTGAATGGTGAACCTCT+TGG 0.497983 6_4:-2572027 Msa0970920:intron
GCATTAGCCGCATACACAAT+CGG 0.498211 6_4:+2580858 None:intergenic
ATACTAGACGTGTCCCAAAC+TGG 0.499017 6_4:+2573327 None:intergenic
ATTCCTTGGGGTGGCCCCAT+AGG 0.499247 6_4:-2580807 Msa0970920:CDS
TTCCATCTCCTACAGACAGC+CGG 0.499670 6_4:+2574171 None:intergenic
GGTCTAAATAGGCGTGAAGT+TGG 0.500818 6_4:-2578086 Msa0970920:CDS
GACCACGCAAAGCCGCTTTG+AGG 0.503721 6_4:+2573424 None:intergenic
CCACCAAGATGATGATGGCC+TGG 0.506657 6_4:-2572275 Msa0970920:three_prime_UTR
CGTCTCATCACATTTCAAAC+CGG 0.508132 6_4:-2583037 Msa0970920:CDS
GAATTTAATGGTGGCAAGCA+GGG 0.508483 6_4:-2573690 Msa0970920:CDS
TAGTTGGTCCTTCGTCAAAA+CGG 0.508808 6_4:-2578166 Msa0970920:CDS
AAGAACACCTTTCCATAAGA+AGG 0.509981 6_4:+2579513 None:intergenic
TTAAGTTATTTATCATCCAA+TGG 0.511232 6_4:+2572336 None:intergenic
ACCTAAAGACGCTCAACACT+TGG 0.511298 6_4:-2578195 Msa0970920:CDS
TCTGAGAAAGATTTGCAAGC+TGG 0.511299 6_4:-2579781 Msa0970920:CDS
GCTAGTGTTCTTTCCTCAGA+TGG 0.513618 6_4:-2580891 Msa0970920:CDS
TCTCAGATATCTCACGAGCT+TGG 0.513795 6_4:+2579797 None:intergenic
GAGAAGAGAAGGTGCTCCTA+AGG 0.515976 6_4:-2581077 Msa0970920:CDS
TTCAGACGGTTCAACATCAA+TGG 0.519935 6_4:-2577694 Msa0970920:CDS
CCCATAGGAATGATTCGAAT+CGG 0.520350 6_4:-2580792 Msa0970920:CDS
TGCACATCAAAGAAAGCTGC+TGG 0.521327 6_4:+2573481 None:intergenic
GGCAAGGGACCTGACTGAGA+TGG 0.524425 6_4:+2573048 None:intergenic
ACATGTTGCTGGTATTTCTG+TGG 0.524783 6_4:-2577531 Msa0970920:CDS
ACATCAATGGCAAGTGTATG+TGG 0.525881 6_4:-2577681 Msa0970920:CDS
TAAAGAACCATGTACCAAGC+AGG 0.527829 6_4:-2576829 Msa0970920:CDS
GTCCTATGTACAGTAACGCT+TGG 0.528173 6_4:-2578221 Msa0970920:CDS
CCTACTGCATAGGTGAAGTT+GGG 0.528572 6_4:-2578118 Msa0970920:CDS
ACTGCAAAAGATTTGCCACT+TGG 0.529258 6_4:-2572931 Msa0970920:CDS
TCTGATACTCAAAGGGCAGA+AGG 0.529983 6_4:-2572988 Msa0970920:CDS
TCTTGGTGGTCTACGTCCAT+GGG 0.530369 6_4:+2572289 None:intergenic
TGCATTGGCCAAGATGTTCA+TGG 0.530439 6_4:-2573462 Msa0970920:CDS
TGAAGTCTATGTCACCCAAA+TGG 0.533602 6_4:+2576994 None:intergenic
CCGATTCGAATCATTCCTAT+GGG 0.533726 6_4:+2580792 None:intergenic
TACAATTACTGGTGTTTGGG+AGG 0.534132 6_4:+2573233 None:intergenic
GTGGGCCGTGAAATTGAAGT+TGG 0.534404 6_4:-2573765 Msa0970920:CDS
CAATTGGATATGAAACCAGC+TGG 0.535165 6_4:-2576936 Msa0970920:CDS
CGGTGTAAAGTGCGGAGAAG+TGG 0.535481 6_4:+2583160 None:intergenic
GCCGGAGGAAAATGTGCGGC+GGG 0.536438 6_4:+2583123 None:intergenic
AATTCCGGTAGTGTTTCCAT+TGG 0.537031 6_4:-2572352 Msa0970920:CDS
CAAAAGTAACTACCAACAGT+TGG 0.537176 6_4:-2573353 Msa0970920:CDS
GTTCTGTATTGCAGGGAGAT+GGG 0.537556 6_4:-2572437 Msa0970920:intron
CTGGTGTTTGGGAGGCTGAG+GGG 0.538238 6_4:+2573241 None:intergenic
CCCAACTTCACCTATGCAGT+AGG 0.538739 6_4:+2578118 None:intergenic
TTGAGAAGAACTGCCCTGCT+TGG 0.539690 6_4:+2576815 None:intergenic
ATATCTAGTGGAATTCCAGC+TGG 0.540658 6_4:+2576921 None:intergenic
ATTGATTCTCCATCTCAGTC+AGG 0.541945 6_4:-2573057 Msa0970920:CDS
CGGTTTGAAATGTGATGAGA+CGG 0.542067 6_4:+2583038 None:intergenic
GTCGAAATCTGATACTCAAA+GGG 0.542952 6_4:-2572995 Msa0970920:CDS
AGTCGAAATCTGATACTCAA+AGG 0.543620 6_4:-2572996 Msa0970920:CDS
CGGATCTTGTGTTCCATCTG+AGG 0.544167 6_4:+2580878 None:intergenic
CAAGATGATGATGGCCTGGA+AGG 0.544344 6_4:-2572271 Msa0970920:three_prime_UTR
AGATGGGAAAACGGACTTGA+AGG 0.546430 6_4:-2572421 Msa0970920:CDS
TCGCCGGAAAATGGCTCCGC+CGG 0.546870 6_4:+2583232 None:intergenic
TAATTGTCTTCCATCAACTC+TGG 0.547579 6_4:+2578456 None:intergenic
CGGAATGATTTAACGTTCGC+CGG 0.548437 6_4:+2583216 None:intergenic
TTATCAGATATTCCTTGGGG+TGG 0.553186 6_4:-2580816 Msa0970920:CDS
AGTATGGCTTTGATGAATGC+CGG 0.553835 6_4:-2577569 Msa0970920:CDS
GGGTTAGTGTTAGATTTGGG+TGG 0.554630 6_4:-2572868 Msa0970920:CDS
AAGATGACTCTACCTCAAAA+CGG 0.557176 6_4:+2572827 None:intergenic
AAAAGTAACTACCAACAGTT+GGG 0.557723 6_4:-2573352 Msa0970920:CDS
AGAAAGTTAATTACAGTGAG+AGG 0.557837 6_4:+2582905 None:intergenic
AAAATTGAGCAAATATATCC+CGG 0.558504 6_4:+2572155 None:intergenic
TCATCCAATGGAAACACTAC+CGG 0.558910 6_4:+2572348 None:intergenic
CCAACTTCACCTATGCAGTA+GGG 0.559578 6_4:+2578119 None:intergenic
CGTAAAAGAATTATTGCAGA+AGG 0.560116 6_4:-2578481 Msa0970920:CDS
AATTATTTGTAGTTTGAACG+TGG 0.560780 6_4:-2579406 Msa0970920:intron
CTGATACTCAAAGGGCAGAA+GGG 0.562290 6_4:-2572987 Msa0970920:CDS
TCGTGTTAACTCTGAAGTCA+TGG 0.563442 6_4:-2577718 Msa0970920:CDS
GAACTGCCCTGCTTGGTACA+TGG 0.563827 6_4:+2576822 None:intergenic
CATTCACATATGATATCTAG+TGG 0.565172 6_4:+2576909 None:intergenic
ACATTATTGATCACATGGAA+CGG 0.565784 6_4:-2576857 Msa0970920:CDS
TAATTAGTCTCTGATCCTCC+GGG 0.568415 6_4:+2573402 None:intergenic
TTCTTTCACGAGACAGCCCA+TGG 0.569090 6_4:-2572305 Msa0970920:three_prime_UTR
GGCGGGAGCCGCTGATGTGA+CGG 0.569102 6_4:+2583140 None:intergenic
TGTAGATGGGCTTTATGTGC+AGG 0.570217 6_4:+2576879 None:intergenic
TCCCTCAAAGCGGCTTTGCG+TGG 0.570819 6_4:-2573426 Msa0970920:CDS
GGAGGAGAAATCTATCAGCT+TGG 0.573621 6_4:-2573184 Msa0970920:CDS
ATTTCAGACATAGTCTCTAT+CGG 0.574117 6_4:-2573504 Msa0970920:CDS
ACTTCATGATAAAATCCAGT+TGG 0.574933 6_4:+2581001 None:intergenic
ATTGCAGGGAGATGGGAAAA+CGG 0.576132 6_4:-2572430 Msa0970920:intron
TCCATCTCCTACAGACAGCC+GGG 0.579815 6_4:+2574172 None:intergenic
GGCCGTGAAATTGAAGTTGG+AGG 0.582532 6_4:-2573762 Msa0970920:CDS
TGGTCCTCTCATTGATAATG+GGG 0.588985 6_4:-2573142 Msa0970920:CDS
GAAGTTGGAGGTATATACAA+AGG 0.589028 6_4:-2573750 Msa0970920:CDS
ACAAGATCCGATTGTGTATG+CGG 0.589502 6_4:-2580865 Msa0970920:CDS
TTTACCCCATTATCAATGAG+AGG 0.591265 6_4:+2573138 None:intergenic
AATAGACACAGTGAGGAAGA+AGG 0.593914 6_4:-2579296 Msa0970920:intron
AGTGAACTTGATCCATGCAC+AGG 0.594773 6_4:-2577500 Msa0970920:CDS
GAAGAGAAGCAATTTGCGCA+TGG 0.595723 6_4:-2581121 Msa0970920:CDS
AAAATTACCTCATCCATCGT+AGG 0.595777 6_4:+2580741 None:intergenic
TGAACCATCGCCGTCGCCGG+AGG 0.601686 6_4:+2583108 None:intergenic
CGCCGGAGGAAAATGTGCGG+CGG 0.603270 6_4:+2583122 None:intergenic
ATTCCTATGGGGCCACCCCA+AGG 0.603275 6_4:+2580804 None:intergenic
AACTACATACAGTTAATCCA+AGG 0.603546 6_4:+2572079 None:intergenic
ATTTGACCTGTGTTTCGCCA+CGG 0.604900 6_4:+2578365 None:intergenic
AATAGGCGTGAAGTTGGTCA+TGG 0.605496 6_4:-2578080 Msa0970920:intron
TTCACGGAGGAATTCGAAGT+CGG 0.605730 6_4:-2583064 Msa0970920:CDS
GTGATCAATAATGTGTAGAT+GGG 0.606079 6_4:+2576866 None:intergenic
GCGAGCAATTTCATCTCTGG+AGG 0.608396 6_4:+2582940 None:intergenic
AAAGAACCATGTACCAAGCA+GGG 0.609870 6_4:-2576828 Msa0970920:CDS
ATGTAGTTTGAGAAAGCCAT+AGG 0.612252 6_4:-2572064 Msa0970920:three_prime_UTR
GGGAAAACGGACTTGAAGGT+AGG 0.615118 6_4:-2572417 Msa0970920:CDS
TCTACGTACATGAGAAGAGA+AGG 0.618212 6_4:-2581088 Msa0970920:CDS
AGATAACAAAATCATTTCGG+CGG 0.620131 6_4:-2582969 Msa0970920:CDS
ATAACTCCGAAATGTGGAGA+AGG 0.623304 6_4:+2573667 None:intergenic
ATGTTATCAGATATTCCTTG+GGG 0.626724 6_4:-2580819 Msa0970920:CDS
TATGTTGTCTGACAAAACAC+TGG 0.627888 6_4:-2579586 Msa0970920:CDS
CCAAACTGGTGCCCAACTGT+TGG 0.628365 6_4:+2573341 None:intergenic
GTAGACCACCAAGATGATGA+TGG 0.629679 6_4:-2572280 Msa0970920:three_prime_UTR
CTTGATATATGCCTGTACAA+AGG 0.633299 6_4:-2579842 Msa0970920:CDS
TCTACACATTATTGATCACA+TGG 0.633687 6_4:-2576862 Msa0970920:CDS
TCTGAAGTCATGGCTTCAGA+CGG 0.633979 6_4:-2577708 Msa0970920:CDS
TCCATGCACAGGCGAAATAG+CGG 0.634456 6_4:-2577489 Msa0970920:CDS
TGCTGCAGAATGTGATGAGG+AGG 0.635597 6_4:-2573202 Msa0970920:CDS
GCGGCTTTGCGTGGTCCCGG+AGG 0.638353 6_4:-2573417 Msa0970920:CDS
CATTAAATTATCCCTCAAAG+CGG 0.641563 6_4:-2573436 Msa0970920:CDS
TGGTTTCATATCCAATTGAG+CGG 0.641864 6_4:+2576941 None:intergenic
TAAAATCCAGTTGGAAACAG+AGG 0.646981 6_4:+2581010 None:intergenic
CATGTGATAACTCCGAAATG+TGG 0.647504 6_4:+2573661 None:intergenic
GAAACAGAGGTCGAATAGGA+CGG 0.649203 6_4:+2581023 None:intergenic
ACTTCACCTATGCAGTAGGG+TGG 0.656442 6_4:+2578122 None:intergenic
TAGGAATGATTCGAATCGGT+AGG 0.660596 6_4:-2580788 Msa0970920:CDS
ATCCGCAGTGCAATTGACAT+CGG 0.661656 6_4:+2583196 None:intergenic
ATTAAGATTTGCTCATCCGG+AGG 0.667712 6_4:-2579758 Msa0970920:intron
ACTACATACAGTTAATCCAA+GGG 0.669306 6_4:+2572080 None:intergenic
GGATGCATTTCCAAGCTGCG+TGG 0.669480 6_4:-2578403 Msa0970920:CDS
GGTGAAGTTGGGAAACGTGG+TGG 0.670526 6_4:-2578107 Msa0970920:CDS
CATCCAGCTTCGCAGTACAA+GGG 0.676795 6_4:+2578421 None:intergenic
GGTGAATCCTACGATGGATG+AGG 0.679871 6_4:-2580748 Msa0970920:intron
ACTTTACACCGTCACATCAG+CGG 0.686921 6_4:-2583148 Msa0970920:CDS
CAAAGACAATAGACACAGTG+AGG 0.691850 6_4:-2579303 Msa0970920:CDS
CGTCGCCGGAGGAAAATGTG+CGG 0.697590 6_4:+2583119 None:intergenic
ATAGGTGAAGTTGGGAAACG+TGG 0.697615 6_4:-2578110 Msa0970920:CDS
TCAATGGCAAGTGTATGTGG+AGG 0.700065 6_4:-2577678 Msa0970920:intron
CTCCAAGCGTTACTGTACAT+AGG 0.701291 6_4:+2578219 None:intergenic
GTTTGTGGTGAATCCTACGA+TGG 0.706597 6_4:-2580754 Msa0970920:CDS
ATTGCATCTTGAGATTTACG+AGG 0.710423 6_4:+2573078 None:intergenic
CAGTGCTGCAGAATGTGATG+AGG 0.715070 6_4:-2573205 Msa0970920:CDS
CGATTCGAATCATTCCTATG+GGG 0.730140 6_4:+2580793 None:intergenic
TGATGTGACGGTGTAAAGTG+CGG 0.755040 6_4:+2583152 None:intergenic
TTCCGATGTCAATTGCACTG+CGG 0.764733 6_4:-2583198 Msa0970920:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTAAATAATTTATTAAA+AGG + chr6_4:2573167-2573186 None:intergenic 0.0%
!! AAAAAAAAATAAATAAATAA+TGG + chr6_4:2583176-2583195 None:intergenic 0.0%
!!! AACTTTTGTAATTAAATTTT+AGG - chr6_4:2573330-2573349 Msa0970920:CDS 10.0%
!! TTAAATATTATAGTAAATAG+TGG + chr6_4:2576416-2576435 None:intergenic 10.0%
!!! TTTATATTTTCAAATAATGT+AGG - chr6_4:2576664-2576683 Msa0970920:CDS 10.0%
!!! TAAATAATATTAACCTATTT+TGG - chr6_4:2580655-2580674 Msa0970920:intron 10.0%
!!! AATATTTTAATATCTTTAAC+AGG + chr6_4:2580846-2580865 None:intergenic 10.0%
!! ATTATTATAAACATACATTT+GGG - chr6_4:2583211-2583230 Msa0970920:exon 10.0%
!! TAGAAATGAAATATAATGTA+TGG - chr6_4:2573220-2573239 Msa0970920:CDS 15.0%
!! AATAAACAAATAAATAACAG+TGG + chr6_4:2574210-2574229 None:intergenic 15.0%
!! GTAAAATATCAATAATCAAA+AGG + chr6_4:2575087-2575106 None:intergenic 15.0%
!!! GTTTTATTTTATTTTTATGC+TGG - chr6_4:2575195-2575214 Msa0970920:intron 15.0%
!!! TAATTTAGGATATGTTTTTT+TGG + chr6_4:2575964-2575983 None:intergenic 15.0%
!! ATTAAAATATTAGTAAAGCA+AGG + chr6_4:2576302-2576321 None:intergenic 15.0%
!! AAATTAAAATGTAGTACATT+TGG + chr6_4:2578142-2578161 None:intergenic 15.0%
!!! TACTACATTTTAATTTTTGA+AGG - chr6_4:2578146-2578165 Msa0970920:CDS 15.0%
!!! ACTACATTTTAATTTTTGAA+GGG - chr6_4:2578147-2578166 Msa0970920:CDS 15.0%
!! TTTCAATTAATTATGTAAGA+TGG - chr6_4:2578789-2578808 Msa0970920:intron 15.0%
!!! ATACAATTTTATAGAAAGAA+GGG - chr6_4:2580727-2580746 Msa0970920:intron 15.0%
!!! ATTAAAATATTGTCCTTTTT+TGG - chr6_4:2580855-2580874 Msa0970920:CDS 15.0%
!! AATCATAAGTAAAAAATGTT+TGG + chr6_4:2582436-2582455 None:intergenic 15.0%
!! TTGATTATTTATAGCAAATA+TGG + chr6_4:2582625-2582644 None:intergenic 15.0%
!!! ATTTATTTTTTTTTTGAAGG+AGG - chr6_4:2583182-2583201 Msa0970920:CDS 15.0%
!! CAAATGTATGTTTATAATAA+TGG + chr6_4:2583212-2583231 None:intergenic 15.0%
!! CATTATTATAAACATACATT+TGG - chr6_4:2583210-2583229 Msa0970920:exon 15.0%
!!! AAAACTTCTTGAAATTTTCA+CGG - chr6_4:2572093-2572112 Msa0970920:three_prime_UTR 20.0%
!!! TCAATTTTACACAATCATTT+CGG - chr6_4:2572539-2572558 Msa0970920:intron 20.0%
!!! TTTTTTTTTCATCCCTAATT+TGG + chr6_4:2572864-2572883 None:intergenic 20.0%
!!! TATATTTAAAATGTTAGCCA+TGG - chr6_4:2573398-2573417 Msa0970920:CDS 20.0%
!! TCAACATACAAAATAAGTTA+TGG - chr6_4:2573772-2573791 Msa0970920:CDS 20.0%
!!! ATTTCAATTTAGGTTGAATT+AGG - chr6_4:2573917-2573936 Msa0970920:intron 20.0%
!! ACATAAACAATTAAGTAGTT+TGG - chr6_4:2574752-2574771 Msa0970920:intron 20.0%
!!! AGATAAAAAGTATCAAACTA+TGG + chr6_4:2575165-2575184 None:intergenic 20.0%
!!! CTTTTAAGAGTGAATAATTT+AGG + chr6_4:2575978-2575997 None:intergenic 20.0%
!!! ATATTTTCAAATAATGTAGG+TGG - chr6_4:2576667-2576686 Msa0970920:CDS 20.0%
!! ATAGAGAACATAAATATCAA+AGG - chr6_4:2577184-2577203 Msa0970920:intron 20.0%
!!! AAGAGAAATCTAGAATTAAA+TGG - chr6_4:2577217-2577236 Msa0970920:intron 20.0%
!!! AAAGGGTTGATATTATAATT+GGG + chr6_4:2577794-2577813 None:intergenic 20.0%
!!! TAAAGGGTTGATATTATAAT+TGG + chr6_4:2577795-2577814 None:intergenic 20.0%
!!! TAATTTTATACAGATATGTG+CGG - chr6_4:2577952-2577971 Msa0970920:intron 20.0%
!! AATGTTACATATTCAAAACT+AGG + chr6_4:2577990-2578009 None:intergenic 20.0%
!! TCTATTGAAAAAATTGGAAA+TGG - chr6_4:2578555-2578574 Msa0970920:intron 20.0%
!!! AGTGAAATTTGATTTGTAAA+AGG - chr6_4:2578760-2578779 Msa0970920:intron 20.0%
!!! GTGAAATTTGATTTGTAAAA+GGG - chr6_4:2578761-2578780 Msa0970920:intron 20.0%
!!! AAGGTCATTTTAAGATATTT+GGG + chr6_4:2579359-2579378 None:intergenic 20.0%
!! AAGTAAAATGTCATTGTAAT+AGG + chr6_4:2580271-2580290 None:intergenic 20.0%
!!! ATACGTTTGAAATTGTATTT+GGG + chr6_4:2580594-2580613 None:intergenic 20.0%
!!! AATACGTTTGAAATTGTATT+TGG + chr6_4:2580595-2580614 None:intergenic 20.0%
!! TCTTTCTATAAAATTGTATC+AGG + chr6_4:2580726-2580745 None:intergenic 20.0%
!!! GATACAATTTTATAGAAAGA+AGG - chr6_4:2580726-2580745 Msa0970920:intron 20.0%
!!! ATTTTTTTTCAACGTTATCT+TGG - chr6_4:2582533-2582552 Msa0970920:intron 20.0%
!! TTATGGATTTAAGAAGTTAA+AGG + chr6_4:2582670-2582689 None:intergenic 20.0%
!! TTAAGTTATTTATCATCCAA+TGG + chr6_4:2582840-2582859 None:intergenic 20.0%
!!! ACCAAGATCAATAATTTTAT+TGG - chr6_4:2582943-2582962 Msa0970920:CDS 20.0%
!! TCCAATAAAATTATTGATCT+TGG + chr6_4:2582947-2582966 None:intergenic 20.0%
!!! CAATAATTTTATTGGAAATC+TGG - chr6_4:2582951-2582970 Msa0970920:CDS 20.0%
!! AAAATTCCAAAAATTTACCA+AGG + chr6_4:2583063-2583082 None:intergenic 20.0%
! GGAAGATAACAAAATCATTT+CGG - chr6_4:2572201-2572220 Msa0970920:three_prime_UTR 25.0%
!!! CTCATTTTGACAAGAATATA+TGG - chr6_4:2572475-2572494 Msa0970920:intron 25.0%
! AGTAATTTCTTGTTCGATTA+GGG - chr6_4:2572639-2572658 Msa0970920:intron 25.0%
! TAATTTGGCCTAACAAATTT+GGG + chr6_4:2572849-2572868 None:intergenic 25.0%
!!! AAATTTGTTAGGCCAAATTA+GGG - chr6_4:2572849-2572868 Msa0970920:CDS 25.0%
! AATAAAATCCGCAACATTAA+TGG - chr6_4:2573045-2573064 Msa0970920:CDS 25.0%
!!! GTATAGGTTTATTTTTTGTG+CGG + chr6_4:2573075-2573094 None:intergenic 25.0%
! TATCCATATCCATTAAGTAA+CGG + chr6_4:2573102-2573121 None:intergenic 25.0%
!! TTACTTAATGGATATGGATA+TGG - chr6_4:2573102-2573121 Msa0970920:CDS 25.0%
!! GTATGGATATTGTTATGTTT+TGG - chr6_4:2573237-2573256 Msa0970920:CDS 25.0%
!!! GTTATGTTTTGGTAAAAAGA+AGG - chr6_4:2573248-2573267 Msa0970920:CDS 25.0%
! TCAACATGCAATTTCAATTT+AGG - chr6_4:2573907-2573926 Msa0970920:intron 25.0%
! GCAATCATTATGATTGAATT+AGG - chr6_4:2574021-2574040 Msa0970920:intron 25.0%
!!! TGATTTGCTGTTGATTTTTA+AGG - chr6_4:2574254-2574273 Msa0970920:intron 25.0%
! TTATGTTATCAGATATTCCT+TGG - chr6_4:2574352-2574371 Msa0970920:intron 25.0%
! TATGTTATCAGATATTCCTT+GGG - chr6_4:2574353-2574372 Msa0970920:intron 25.0%
! TACAAGTTATTGTAATACAG+AGG + chr6_4:2574523-2574542 None:intergenic 25.0%
! ATTATGAAATAAGCTCTCAT+GGG - chr6_4:2574845-2574864 Msa0970920:intron 25.0%
!!! ACTTCAATTTTTTGGGTTTT+TGG - chr6_4:2574945-2574964 Msa0970920:intron 25.0%
!!! CTTCAATTTTTTGGGTTTTT+GGG - chr6_4:2574946-2574965 Msa0970920:intron 25.0%
!!! CTTTAAAGTTATTAGCAGTT+TGG - chr6_4:2574984-2575003 Msa0970920:intron 25.0%
! AAAACAATAAAATTCACCTC+CGG + chr6_4:2575434-2575453 None:intergenic 25.0%
! AATTATTTGTAGTTTGAACG+TGG - chr6_4:2575767-2575786 Msa0970920:intron 25.0%
! AATACTTACTCTAGTATCTA+TGG + chr6_4:2576050-2576069 None:intergenic 25.0%
! GTATTTAACTAACATGTCAA+TGG - chr6_4:2576251-2576270 Msa0970920:intron 25.0%
! ATTAGTTCCTACATTATGTA+TGG + chr6_4:2576336-2576355 None:intergenic 25.0%
!!! TTTTCTTGTCATGTTGATTT+TGG - chr6_4:2576608-2576627 Msa0970920:intron 25.0%
!! CTTCTGCAATAATTCTTTTA+CGG + chr6_4:2576694-2576713 None:intergenic 25.0%
!!! AGTGATTTTAGTTTTATCTG+AGG - chr6_4:2576904-2576923 Msa0970920:CDS 25.0%
!! TGTATATTCTCTTTACGTTT+TGG - chr6_4:2577154-2577173 Msa0970920:intron 25.0%
! TAATTCTAGATTTCTCTTGA+TGG + chr6_4:2577215-2577234 None:intergenic 25.0%
! CAATTATTACTAAACATCAC+AGG + chr6_4:2577841-2577860 None:intergenic 25.0%
! AATATAAAAACACGTGAATC+AGG + chr6_4:2578071-2578090 None:intergenic 25.0%
!!! ATTTTAATTTTTGAAGGGCT+TGG - chr6_4:2578152-2578171 Msa0970920:CDS 25.0%
! AACATTACCAAACAAATGAA+AGG + chr6_4:2578416-2578435 None:intergenic 25.0%
! AAAAAATTGGAAATGGAAAC+AGG - chr6_4:2578562-2578581 Msa0970920:intron 25.0%
!!! CTTTTTTTGCTCTTGTATTT+TGG - chr6_4:2578706-2578725 Msa0970920:intron 25.0%
!!! TTTTTCGAGGAAAAATTTAG+AGG + chr6_4:2579064-2579083 None:intergenic 25.0%
!!! CAAGGTCATTTTAAGATATT+TGG + chr6_4:2579360-2579379 None:intergenic 25.0%
! CAAATATCTTAAAATGACCT+TGG - chr6_4:2579358-2579377 Msa0970920:CDS 25.0%
! AAGTCAAATGTCATTGTAAT+AGG - chr6_4:2579413-2579432 Msa0970920:intron 25.0%
! AAATGTCATTGTAATAGGAA+GGG - chr6_4:2579418-2579437 Msa0970920:intron 25.0%
! TATGTCAAGAATTTGATTGT+GGG + chr6_4:2579521-2579540 None:intergenic 25.0%
! ATATGTCAAGAATTTGATTG+TGG + chr6_4:2579522-2579541 None:intergenic 25.0%
!! ATACATTTGCTAGTGATAAA+TGG + chr6_4:2579556-2579575 None:intergenic 25.0%
! TTATCACTAGCAAATGTATA+TGG - chr6_4:2579557-2579576 Msa0970920:CDS 25.0%
!! TATTAGTGACGCATTTTTAA+GGG + chr6_4:2579722-2579741 None:intergenic 25.0%
!! ATATTAGTGACGCATTTTTA+AGG + chr6_4:2579723-2579742 None:intergenic 25.0%
!! CTTTTCAATGTAATGAACTA+TGG - chr6_4:2579847-2579866 Msa0970920:CDS 25.0%
! TTGTTTGACAATGTCAAAAT+AGG - chr6_4:2580016-2580035 Msa0970920:intron 25.0%
! AAATAGGTGTATATATGCAA+TGG - chr6_4:2580032-2580051 Msa0970920:intron 25.0%
! TTGACAAACTTCAAAATAGA+AGG - chr6_4:2580056-2580075 Msa0970920:intron 25.0%
!! TCAAAATAGAAGGTGTATAA+AGG - chr6_4:2580066-2580085 Msa0970920:intron 25.0%
! CATATATACATTAGGAATGT+GGG + chr6_4:2580490-2580509 None:intergenic 25.0%
! ACATATATACATTAGGAATG+TGG + chr6_4:2580491-2580510 None:intergenic 25.0%
! ATTCCTAATGTATATATGTG+CGG - chr6_4:2580492-2580511 Msa0970920:intron 25.0%
! TCATTTATAAGTAAAGTGCA+AGG + chr6_4:2580619-2580638 None:intergenic 25.0%
! AAACTTTCAAAACAAGATCA+AGG + chr6_4:2580793-2580812 None:intergenic 25.0%
! AACAGGATTTAGATAAAAAC+TGG + chr6_4:2580829-2580848 None:intergenic 25.0%
!! GTGTGTGTATATATATTTTG+CGG - chr6_4:2580919-2580938 Msa0970920:intron 25.0%
!! TGCTATTATTTTCTACAATC+AGG - chr6_4:2580976-2580995 Msa0970920:intron 25.0%
! AATGGATAAAACACTAGAAA+AGG - chr6_4:2581056-2581075 Msa0970920:CDS 25.0%
! TTAGAATAACAGACAGAAAA+GGG + chr6_4:2581354-2581373 None:intergenic 25.0%
! AATTATTACGTCATACATAC+CGG + chr6_4:2581540-2581559 None:intergenic 25.0%
! TATTACAATTACTGGTGTTT+GGG + chr6_4:2581946-2581965 None:intergenic 25.0%
! TCATCTTTATGTTTCATAAG+TGG - chr6_4:2582362-2582381 Msa0970920:intron 25.0%
! TAAAAAATGTTTGGCAAAAG+AGG + chr6_4:2582427-2582446 None:intergenic 25.0%
!! TACAAATCCATCTTTTTGTA+TGG - chr6_4:2582461-2582480 Msa0970920:intron 25.0%
! TATTGATCGATTGATGTTAT+TGG + chr6_4:2582988-2583007 None:intergenic 25.0%
! AAAATTGAGCAAATATATCC+CGG + chr6_4:2583021-2583040 None:intergenic 25.0%
!! ATAAATAATGGAAATCCAAG+AGG + chr6_4:2583164-2583183 None:intergenic 25.0%
! CTACACATAGATTTTTCTTC+CGG - chr6_4:2571922-2571941 Msa0970920:three_prime_UTR 30.0%
ACATTTCAAACCGGAAAATA+CGG - chr6_4:2572145-2572164 Msa0970920:three_prime_UTR 30.0%
AGATAACAAAATCATTTCGG+CGG - chr6_4:2572204-2572223 Msa0970920:three_prime_UTR 30.0%
AGAAAGTTAATTACAGTGAG+AGG + chr6_4:2572271-2572290 None:intergenic 30.0%
! AATTGATTCTGACACATGTT+TGG - chr6_4:2572347-2572366 Msa0970920:CDS 30.0%
! AGTTGATTCTACTTGAAACT+AGG - chr6_4:2572400-2572419 Msa0970920:CDS 30.0%
ACCTAATAAGTGTGTATCTT+TGG + chr6_4:2572592-2572611 None:intergenic 30.0%
CAGTAATTTCTTGTTCGATT+AGG - chr6_4:2572638-2572657 Msa0970920:intron 30.0%
CTAATTTGGCCTAACAAATT+TGG + chr6_4:2572850-2572869 None:intergenic 30.0%
!! CAAATTTGTTAGGCCAAATT+AGG - chr6_4:2572848-2572867 Msa0970920:CDS 30.0%
ATGAAAAAAAAAAGTCCCTG+CGG - chr6_4:2572872-2572891 Msa0970920:CDS 30.0%
ACGTAAAATGGATATCCAAT+TGG - chr6_4:2572935-2572954 Msa0970920:CDS 30.0%
CGTAAAATGGATATCCAATT+GGG - chr6_4:2572936-2572955 Msa0970920:CDS 30.0%
!!! TATTTTGGTCATCCCTAATT+TGG + chr6_4:2573010-2573029 None:intergenic 30.0%
! AATGTTGCGGATTTTATTCA+TGG + chr6_4:2573043-2573062 None:intergenic 30.0%
!! ATTAAGTAACGGGTAAGTAT+AGG + chr6_4:2573091-2573110 None:intergenic 30.0%
TATACTTACCCGTTACTTAA+TGG - chr6_4:2573090-2573109 Msa0970920:CDS 30.0%
ATCCATATCCATTAAGTAAC+GGG + chr6_4:2573101-2573120 None:intergenic 30.0%
!! TTAAAAGGTACCAATACCAA+CGG + chr6_4:2573152-2573171 None:intergenic 30.0%
AAGTTCATCACATTCAACTA+AGG + chr6_4:2573191-2573210 None:intergenic 30.0%
TAGTTGAATGTGATGAACTT+TGG - chr6_4:2573191-2573210 Msa0970920:CDS 30.0%
! TTTTCTTTAAACTCGCTATC+TGG + chr6_4:2573519-2573538 None:intergenic 30.0%
CTTCAAGCTACTAGTATTAA+CGG + chr6_4:2573630-2573649 None:intergenic 30.0%
!! CAATACTTTCTGGTTGAATT+AGG - chr6_4:2573669-2573688 Msa0970920:CDS 30.0%
ACTTCATGATAAAATCCAGT+TGG + chr6_4:2574175-2574194 None:intergenic 30.0%
! TGGATTTTATCATGAAGTTC+AGG - chr6_4:2574177-2574196 Msa0970920:CDS 30.0%
ATGTTATCAGATATTCCTTG+GGG - chr6_4:2574354-2574373 Msa0970920:intron 30.0%
CAACATAATTTGAACTGACT+TGG - chr6_4:2574455-2574474 Msa0970920:intron 30.0%
!!! TGCTTATATGGTGTTTTTTG+TGG - chr6_4:2574682-2574701 Msa0970920:intron 30.0%
GTCATGTACAATATTGTCAA+TGG + chr6_4:2574734-2574753 None:intergenic 30.0%
GGTGATTATCAAATAAGCAT+AGG - chr6_4:2574797-2574816 Msa0970920:intron 30.0%
! CATAGGAAAATTAGCTTATG+TGG - chr6_4:2574814-2574833 Msa0970920:intron 30.0%
! AAAATTAGCTTATGTGGCTT+AGG - chr6_4:2574820-2574839 Msa0970920:intron 30.0%
GATTATGAAATAAGCTCTCA+TGG - chr6_4:2574844-2574863 Msa0970920:intron 30.0%
AGACAAACATGAGTACATTT+AGG + chr6_4:2574900-2574919 None:intergenic 30.0%
!!! TTATCGCGACTTCAATTTTT+TGG - chr6_4:2574937-2574956 Msa0970920:intron 30.0%
!!! TATCGCGACTTCAATTTTTT+GGG - chr6_4:2574938-2574957 Msa0970920:intron 30.0%
! AAGTCTAAACTGTTGTTTGT+TGG - chr6_4:2575126-2575145 Msa0970920:intron 30.0%
GACTTCTCTGATAAATATCT+TGG - chr6_4:2575233-2575252 Msa0970920:intron 30.0%
ATACAAAGCAATGAGAAATG+GGG + chr6_4:2575278-2575297 None:intergenic 30.0%
GATACAAAGCAATGAGAAAT+GGG + chr6_4:2575279-2575298 None:intergenic 30.0%
!! CAAAGTTTTATCCTTTGTAC+AGG + chr6_4:2575345-2575364 None:intergenic 30.0%
ATATGTTTCTCTGATTGTTC+AGG - chr6_4:2575491-2575510 Msa0970920:intron 30.0%
! TCAGTGAAAACAGCTTTAAT+AGG + chr6_4:2575639-2575658 None:intergenic 30.0%
ATATTAGTAAAGCAAGGATC+TGG + chr6_4:2576296-2576315 None:intergenic 30.0%
! TGCACTGATATAAGATTGTA+GGG + chr6_4:2576389-2576408 None:intergenic 30.0%
! ATGCACTGATATAAGATTGT+AGG + chr6_4:2576390-2576409 None:intergenic 30.0%
ACTGAGATATGAAGTTACAA+GGG + chr6_4:2576570-2576589 None:intergenic 30.0%
TACTGAGATATGAAGTTACA+AGG + chr6_4:2576571-2576590 None:intergenic 30.0%
!!! GTCATGTTGATTTTGGAATT+TGG - chr6_4:2576615-2576634 Msa0970920:CDS 30.0%
CGTAAAAGAATTATTGCAGA+AGG - chr6_4:2576692-2576711 Msa0970920:intron 30.0%
!! TGTTCTCTGTTTTTCTGTTA+TGG - chr6_4:2576832-2576851 Msa0970920:CDS 30.0%
!! GTTCTCTGTTTTTCTGTTAT+GGG - chr6_4:2576833-2576852 Msa0970920:CDS 30.0%
! TATTATGCATAGTCTTAGCA+AGG + chr6_4:2577129-2577148 None:intergenic 30.0%
! GTACTAAAAAAAAAGCGTGT+TGG + chr6_4:2577265-2577284 None:intergenic 30.0%
! TTTTGATGTTTTGCCTTTGT+AGG - chr6_4:2577369-2577388 Msa0970920:intron 30.0%
GTATATGGAAAAACAACTTC+AGG + chr6_4:2577432-2577451 None:intergenic 30.0%
CCAAAATATCAGTCAGTATA+CGG + chr6_4:2577714-2577733 None:intergenic 30.0%
!!! CTTTTGACTTCTACTTTTCA+TGG - chr6_4:2578035-2578054 Msa0970920:intron 30.0%
AGATAGCTATCAAACAAACA+AGG - chr6_4:2578102-2578121 Msa0970920:CDS 30.0%
CATTCACATATGATATCTAG+TGG + chr6_4:2578267-2578286 None:intergenic 30.0%
GTGATCAATAATGTGTAGAT+GGG + chr6_4:2578310-2578329 None:intergenic 30.0%
TGTGATCAATAATGTGTAGA+TGG + chr6_4:2578311-2578330 None:intergenic 30.0%
TCTACACATTATTGATCACA+TGG - chr6_4:2578311-2578330 Msa0970920:intron 30.0%
ACATTATTGATCACATGGAA+CGG - chr6_4:2578316-2578335 Msa0970920:intron 30.0%
CAAACAAATGAAAGGAGAAA+AGG + chr6_4:2578408-2578427 None:intergenic 30.0%
! CTTTTCTCCTTTCATTTGTT+TGG - chr6_4:2578406-2578425 Msa0970920:CDS 30.0%
! GTTAGATTCCTTGATGTTTT+AGG - chr6_4:2578440-2578459 Msa0970920:CDS 30.0%
!! TTTTTCAATAGAACACCCAT+TGG + chr6_4:2578547-2578566 None:intergenic 30.0%
GGGTGTTCTATTGAAAAAAT+TGG - chr6_4:2578549-2578568 Msa0970920:intron 30.0%
ATCTTTCCAGGTTTGTAAAT+GGG - chr6_4:2578732-2578751 Msa0970920:intron 30.0%
AAGTAATCTTTAGTCCGTAA+AGG - chr6_4:2578815-2578834 Msa0970920:intron 30.0%
! AAAGTACTCTGAAAGTCAAA+AGG - chr6_4:2578863-2578882 Msa0970920:intron 30.0%
CTTATTACCAACAATTGTCT+TGG - chr6_4:2578899-2578918 Msa0970920:intron 30.0%
! TCTTTTACCAAGACAATTGT+TGG + chr6_4:2578909-2578928 None:intergenic 30.0%
GAGGAAAAATTTAGAGGAAT+AGG + chr6_4:2579058-2579077 None:intergenic 30.0%
! TTTTTCCTCGAAAAAGAGAA+AGG - chr6_4:2579069-2579088 Msa0970920:intron 30.0%
AGTCTGTTTAACAATACTGA+AGG + chr6_4:2579097-2579116 None:intergenic 30.0%
TCAGTATTGTTAAACAGACT+TGG - chr6_4:2579097-2579116 Msa0970920:intron 30.0%
! ATCCAATTTTCAAATGTCCT+AGG - chr6_4:2579254-2579273 Msa0970920:intron 30.0%
! TCCAATTTTCAAATGTCCTA+GGG - chr6_4:2579255-2579274 Msa0970920:intron 30.0%
ATGTATTTCAGCTATCATCA+GGG - chr6_4:2579295-2579314 Msa0970920:intron 30.0%
TGTTTATAGAATGCAAGTGT+TGG - chr6_4:2579385-2579404 Msa0970920:CDS 30.0%
CAAATGTCATTGTAATAGGA+AGG - chr6_4:2579417-2579436 Msa0970920:intron 30.0%
CTTCAAAATAGGTGTATTGA+AGG + chr6_4:2579594-2579613 None:intergenic 30.0%
AAAAGGAATCTATATGCTTG+AGG + chr6_4:2579654-2579673 None:intergenic 30.0%
! TCAAGCATATAGATTCCTTT+TGG - chr6_4:2579653-2579672 Msa0970920:CDS 30.0%
! CAAGCATATAGATTCCTTTT+GGG - chr6_4:2579654-2579673 Msa0970920:CDS 30.0%
AAAACTATCTTGATCCCAAA+AGG + chr6_4:2579671-2579690 None:intergenic 30.0%
! GGTCAAGATTTTCAATGTAA+TGG + chr6_4:2579779-2579798 None:intergenic 30.0%
AAAATGTGTGCTTACATGTT+TGG + chr6_4:2579821-2579840 None:intergenic 30.0%
AATGAACTATGGTTAAATCG+CGG - chr6_4:2579858-2579877 Msa0970920:CDS 30.0%
CTTCATTCACTACAGATAAA+TGG - chr6_4:2580100-2580119 Msa0970920:intron 30.0%
TATTTATAGAATGCAAGCGA+TGG + chr6_4:2580311-2580330 None:intergenic 30.0%
!! AAAGCCCTTCTAAGATAATT+GGG - chr6_4:2580337-2580356 Msa0970920:intron 30.0%
TTCACCCAATTATCTTAGAA+GGG + chr6_4:2580344-2580363 None:intergenic 30.0%
TTTCACCCAATTATCTTAGA+AGG + chr6_4:2580345-2580364 None:intergenic 30.0%
! TATCTTAGTCGGATTTTTGT+AGG - chr6_4:2580421-2580440 Msa0970920:intron 30.0%
! ATCTTAGTCGGATTTTTGTA+GGG - chr6_4:2580422-2580441 Msa0970920:intron 30.0%
TGGAATCAAAAAGCCAAAAT+AGG + chr6_4:2580671-2580690 None:intergenic 30.0%
GAATACAATTTACAAAGCAG+AGG + chr6_4:2580698-2580717 None:intergenic 30.0%
CTGCTTTGTAAATTGTATTC+TGG - chr6_4:2580698-2580717 Msa0970920:intron 30.0%
!!! CATGTTTTAGAAGCCAAAAA+AGG + chr6_4:2580871-2580890 None:intergenic 30.0%
AAAATAATAGCATGTTCAGC+AGG + chr6_4:2580968-2580987 None:intergenic 30.0%
TACCAAGAATCAATCTGTAA+TGG - chr6_4:2581038-2581057 Msa0970920:CDS 30.0%
! ATCCATTACAGATTGATTCT+TGG + chr6_4:2581043-2581062 None:intergenic 30.0%
TGCATGATATTATCATCACA+TGG + chr6_4:2581233-2581252 None:intergenic 30.0%
CTTAGAATAACAGACAGAAA+AGG + chr6_4:2581355-2581374 None:intergenic 30.0%
GTCACCTCTATAAAAGAATA+TGG - chr6_4:2581450-2581469 Msa0970920:intron 30.0%
! AGCTCCATATTCTTTTATAG+AGG + chr6_4:2581457-2581476 None:intergenic 30.0%
! GGAGCTTTTGTTGAATTTAA+TGG - chr6_4:2581471-2581490 Msa0970920:intron 30.0%
! GCTTTTGTTGAATTTAATGG+TGG - chr6_4:2581474-2581493 Msa0970920:intron 30.0%
AAAAACTCTATGCTTTCCTT+AGG - chr6_4:2581638-2581657 Msa0970920:intron 30.0%
ATTTCAGACATAGTCTCTAT+CGG - chr6_4:2581669-2581688 Msa0970920:intron 30.0%
TAATGTTACCATGAACATCT+TGG + chr6_4:2581722-2581741 None:intergenic 30.0%
CATTAAATTATCCCTCAAAG+CGG - chr6_4:2581737-2581756 Msa0970920:intron 30.0%
AAAAGTAACTACCAACAGTT+GGG - chr6_4:2581821-2581840 Msa0970920:intron 30.0%
GTATTACAATTACTGGTGTT+TGG + chr6_4:2581947-2581966 None:intergenic 30.0%
GATCACAATCAAACTTCAAA+TGG - chr6_4:2582011-2582030 Msa0970920:intron 30.0%
!! CATTGATAATGGGGTAAAAT+TGG - chr6_4:2582040-2582059 Msa0970920:intron 30.0%
! TCTTTTTGCGTTGAATGTTT+TGG + chr6_4:2582158-2582177 None:intergenic 30.0%
!! GCTTTAAATTTTGTTCCAAG+TGG + chr6_4:2582260-2582279 None:intergenic 30.0%
TGCACGAATTTGAAAAACTT+TGG + chr6_4:2582282-2582301 None:intergenic 30.0%
!! TTTTTCAAATTCGTGCACAT+GGG - chr6_4:2582285-2582304 Msa0970920:intron 30.0%
CAGTTTCTTTCTGATATGTA+TGG - chr6_4:2582385-2582404 Msa0970920:intron 30.0%
CAAGAAACCATACAAAAAGA+TGG + chr6_4:2582471-2582490 None:intergenic 30.0%
TATTAGTGTTCTGTATTGCA+GGG - chr6_4:2582729-2582748 Msa0970920:intron 30.0%
! TCAATTTTTGTTGAACTGCT+GGG - chr6_4:2583033-2583052 Msa0970920:CDS 30.0%
ACTACATACAGTTAATCCAA+GGG + chr6_4:2583096-2583115 None:intergenic 30.0%
AACTACATACAGTTAATCCA+AGG + chr6_4:2583097-2583116 None:intergenic 30.0%
AATGAGTCTTAGAGATTGAA+TGG - chr6_4:2583134-2583153 Msa0970920:CDS 30.0%
ATTTGGGTGCAAAAAAGTAA+TGG - chr6_4:2583227-2583246 Msa0970920:five_prime_UTR 30.0%
CATCATTCAATCATACATTC+AGG + chr6_4:2583253-2583272 None:intergenic 30.0%
! ACTTCTTGAAATTTTCACGG+AGG - chr6_4:2572096-2572115 Msa0970920:three_prime_UTR 35.0%
AAATACGGTCGTTTCTCAAA+TGG - chr6_4:2572160-2572179 Msa0970920:three_prime_UTR 35.0%
GTGCAATCAAACATACACTA+AGG + chr6_4:2572313-2572332 None:intergenic 35.0%
TTCAAGTAGAATCAACTCTG+AGG + chr6_4:2572397-2572416 None:intergenic 35.0%
GCCAAAGATACACACTTATT+AGG - chr6_4:2572588-2572607 Msa0970920:intron 35.0%
GTTTATGTGTTGGGTTCAAT+TGG - chr6_4:2572798-2572817 Msa0970920:intron 35.0%
TTACGTGCGTATATCCATTA+AGG + chr6_4:2572921-2572940 None:intergenic 35.0%
ATGGATATACGCACGTAAAA+TGG - chr6_4:2572923-2572942 Msa0970920:CDS 35.0%
! TACCCGTTACTTAATGGATA+TGG - chr6_4:2573096-2573115 Msa0970920:CDS 35.0%
AATGGATATGGATATGGATG+TGG - chr6_4:2573108-2573127 Msa0970920:CDS 35.0%
GGATATGGATGTGGATTTAA+TGG - chr6_4:2573117-2573136 Msa0970920:CDS 35.0%
!! TAAAAGGTACCAATACCAAC+GGG + chr6_4:2573151-2573170 None:intergenic 35.0%
GAATGTGATGAACTTTGGTT+TGG - chr6_4:2573196-2573215 Msa0970920:CDS 35.0%
GGTGTATTTACAGATATCCA+TGG + chr6_4:2573418-2573437 None:intergenic 35.0%
GATATCAATATATGTGCCCA+TGG - chr6_4:2573472-2573491 Msa0970920:CDS 35.0%
GGTTGTAAATGAGTATCCAT+GGG + chr6_4:2573491-2573510 None:intergenic 35.0%
! CATGAATTTGCAGTTGTTTC+TGG - chr6_4:2573561-2573580 Msa0970920:intron 35.0%
CACACAATTGCAATACTTTC+TGG - chr6_4:2573659-2573678 Msa0970920:CDS 35.0%
CACGAAATTTCAATCATCTC+TGG - chr6_4:2573812-2573831 Msa0970920:intron 35.0%
AAGCTTCAAGCTACTAATCA+TGG + chr6_4:2573886-2573905 None:intergenic 35.0%
TAAAATCCAGTTGGAAACAG+AGG + chr6_4:2574166-2574185 None:intergenic 35.0%
!!! GCTGTTGATTTTTAAGGTGA+CGG - chr6_4:2574260-2574279 Msa0970920:intron 35.0%
AAAATTACCTCATCCATCGT+AGG + chr6_4:2574435-2574454 None:intergenic 35.0%
ATCCCTTCATAAATTGCCTA+TGG + chr6_4:2574628-2574647 None:intergenic 35.0%
! AACTGTTGTTTGTTGGAAGT+TGG - chr6_4:2575133-2575152 Msa0970920:intron 35.0%
CGATACAAAGCAATGAGAAA+TGG + chr6_4:2575280-2575299 None:intergenic 35.0%
CTTGATATATGCCTGTACAA+AGG - chr6_4:2575331-2575350 Msa0970920:intron 35.0%
! TGGATTAAGATTTGCTCATC+CGG - chr6_4:2575412-2575431 Msa0970920:intron 35.0%
TTAGCAGCAAGTCTAATTTG+AGG + chr6_4:2575534-2575553 None:intergenic 35.0%
TATGTTGTCTGACAAAACAC+TGG - chr6_4:2575587-2575606 Msa0970920:intron 35.0%
ACTGGAGAAAGTCAGTAATT+TGG - chr6_4:2575605-2575624 Msa0970920:intron 35.0%
! GTTTTCACTGATCCTTCTTA+TGG - chr6_4:2575648-2575667 Msa0970920:intron 35.0%
AAGAACACCTTTCCATAAGA+AGG + chr6_4:2575663-2575682 None:intergenic 35.0%
!! AAGAAAGTGCTTGAAGAAGA+AGG - chr6_4:2575821-2575840 Msa0970920:intron 35.0%
! AGGAGATGAAGAAAGCATAA+AGG - chr6_4:2575841-2575860 Msa0970920:intron 35.0%
CTTACTCTAGTATCTATGGA+TGG + chr6_4:2576046-2576065 None:intergenic 35.0%
CTCAATAAATAGACTCATCG+CGG + chr6_4:2576208-2576227 None:intergenic 35.0%
AGATCAGCCATACATAATGT+AGG - chr6_4:2576326-2576345 Msa0970920:intron 35.0%
TAATTGTCTTCCATCAACTC+TGG + chr6_4:2576720-2576739 None:intergenic 35.0%
!! TCTGTTTTTCTGTTATGGGT+TGG - chr6_4:2576837-2576856 Msa0970920:CDS 35.0%
!!! TATTTTTTATCGCCATGCAC+AGG - chr6_4:2576930-2576949 Msa0970920:CDS 35.0%
AGAATTAAATGGTCTCCCTT+TGG - chr6_4:2577228-2577247 Msa0970920:intron 35.0%
ATTACATATGTTCCCTCCAT+GGG + chr6_4:2577305-2577324 None:intergenic 35.0%
ATGGAGGGAACATATGTAAT+CGG - chr6_4:2577305-2577324 Msa0970920:intron 35.0%
GAACATATGTAATCGGAGTT+TGG - chr6_4:2577312-2577331 Msa0970920:intron 35.0%
TATGGAAAAACAACTTCAGG+AGG + chr6_4:2577429-2577448 None:intergenic 35.0%
GAGTTAACACGAACAGTATA+TGG + chr6_4:2577447-2577466 None:intergenic 35.0%
! GTCTGTTTTGTACATAGACT+AGG + chr6_4:2577550-2577569 None:intergenic 35.0%
!! CCGTATACTGACTGATATTT+TGG - chr6_4:2577711-2577730 Msa0970920:CDS 35.0%
GGTAATGACTCAATCGTAAA+GGG + chr6_4:2577811-2577830 None:intergenic 35.0%
AGGTAATGACTCAATCGTAA+AGG + chr6_4:2577812-2577831 None:intergenic 35.0%
AAAACACGTGAATCAGGAAT+GGG + chr6_4:2578065-2578084 None:intergenic 35.0%
AAAAACACGTGAATCAGGAA+TGG + chr6_4:2578066-2578085 None:intergenic 35.0%
! TTGATAGCTATCTGTCTACT+TGG + chr6_4:2578095-2578114 None:intergenic 35.0%
TGGTTTCATATCCAATTGAG+CGG + chr6_4:2578235-2578254 None:intergenic 35.0%
CATTATTGATCACATGGAAC+GGG - chr6_4:2578317-2578336 Msa0970920:intron 35.0%
! TAGGGTATCCTAAAACATCA+AGG + chr6_4:2578451-2578470 None:intergenic 35.0%
!!! GTATTTTGGTTGATCTTTCC+AGG - chr6_4:2578720-2578739 Msa0970920:intron 35.0%
GATCTTTCCAGGTTTGTAAA+TGG - chr6_4:2578731-2578750 Msa0970920:intron 35.0%
TCTTTCCAGGTTTGTAAATG+GGG - chr6_4:2578733-2578752 Msa0970920:intron 35.0%
! TTTTACCCCATTTACAAACC+TGG + chr6_4:2578741-2578760 None:intergenic 35.0%
TAATCTTTAGTCCGTAAAGG+AGG - chr6_4:2578818-2578837 Msa0970920:intron 35.0%
! CTCTGAAAGTCAAAAGGATT+AGG - chr6_4:2578869-2578888 Msa0970920:intron 35.0%
TGCAATGTGTATATGTGCTT+TGG + chr6_4:2579160-2579179 None:intergenic 35.0%
GACATTTGAAAATTGGATCC+AGG + chr6_4:2579252-2579271 None:intergenic 35.0%
CTGATGATAGCTGAAATACA+TGG + chr6_4:2579296-2579315 None:intergenic 35.0%
CATGTATTTCAGCTATCATC+AGG - chr6_4:2579294-2579313 Msa0970920:intron 35.0%
TGTATTTCAGCTATCATCAG+GGG - chr6_4:2579296-2579315 Msa0970920:intron 35.0%
TCATCAGGGGATGATATTTA+TGG - chr6_4:2579309-2579328 Msa0970920:CDS 35.0%
CATTCTATAAACAGCAACCA+AGG + chr6_4:2579378-2579397 None:intergenic 35.0%
!! TTATAGAATGCAAGTGTTGG+TGG - chr6_4:2579388-2579407 Msa0970920:CDS 35.0%
TCATTGTAATAGGAAGGGTA+TGG - chr6_4:2579423-2579442 Msa0970920:intron 35.0%
GCAAATGTATATGGATCACT+TGG - chr6_4:2579566-2579585 Msa0970920:CDS 35.0%
GGTTGGACAAACTTCAAAAT+AGG + chr6_4:2579605-2579624 None:intergenic 35.0%
ATGTTTAATGGTTCATGCGA+TGG + chr6_4:2579626-2579645 None:intergenic 35.0%
CTTGAGGAAGCTATGTTTAA+TGG + chr6_4:2579638-2579657 None:intergenic 35.0%
!! AGTTTTCCATCCGATTTGTA+CGG - chr6_4:2579685-2579704 Msa0970920:intron 35.0%
GTGAATGATACCGTACAAAT+CGG + chr6_4:2579698-2579717 None:intergenic 35.0%
!! AATGGACTACAATGTGATTG+CGG + chr6_4:2579761-2579780 None:intergenic 35.0%
ATGTTGAACCCACAATGTAA+TGG - chr6_4:2579955-2579974 Msa0970920:intron 35.0%
AGTACAGTCCATTACATTGT+GGG + chr6_4:2579966-2579985 None:intergenic 35.0%
TGTAGTGAATGAAGATCACT+TGG + chr6_4:2580094-2580113 None:intergenic 35.0%
TATCACATTGGATTGTGGAT+GGG - chr6_4:2580165-2580184 Msa0970920:intron 35.0%
! CTCATTTGTTGATCAAGCAA+GGG + chr6_4:2580218-2580237 None:intergenic 35.0%
! ACTCATTTGTTGATCAAGCA+AGG + chr6_4:2580219-2580238 None:intergenic 35.0%
! ATAGGAAGAGTGTGACAATT+TGG + chr6_4:2580253-2580272 None:intergenic 35.0%
GCAAGCGATGGATATATTAT+TGG + chr6_4:2580299-2580318 None:intergenic 35.0%
!! CAAAGCCCTTCTAAGATAAT+TGG - chr6_4:2580336-2580355 Msa0970920:intron 35.0%
! GATTTTTGTAGGGCAAGTTT+AGG - chr6_4:2580432-2580451 Msa0970920:intron 35.0%
ATTTACAAAGCAGAGGAAGA+TGG + chr6_4:2580691-2580710 None:intergenic 35.0%
CTTTCAAAACAAGATCAAGG+AGG + chr6_4:2580790-2580809 None:intergenic 35.0%
AAACAACCTGACAAACAAGA+AGG + chr6_4:2581383-2581402 None:intergenic 35.0%
!! TTGTCAGGTTGTTTCTATAG+TGG - chr6_4:2581389-2581408 Msa0970920:intron 35.0%
!! TGTCAGGTTGTTTCTATAGT+GGG - chr6_4:2581390-2581409 Msa0970920:intron 35.0%
TACCTCCAACTTCAATTTCA+CGG + chr6_4:2581416-2581435 None:intergenic 35.0%
! GAAGTTGGAGGTATATACAA+AGG - chr6_4:2581423-2581442 Msa0970920:intron 35.0%
! TCTGAAATCTTGGAAACCTA+AGG + chr6_4:2581657-2581676 None:intergenic 35.0%
! AGAGACTATGTCTGAAATCT+TGG + chr6_4:2581667-2581686 None:intergenic 35.0%
! ATAATTAGTCTCTGATCCTC+CGG + chr6_4:2581775-2581794 None:intergenic 35.0%
CAAAAGTAACTACCAACAGT+TGG - chr6_4:2581820-2581839 Msa0970920:intron 35.0%
AATGGTCCTCTCATTGATAA+TGG - chr6_4:2582029-2582048 Msa0970920:intron 35.0%
! ATGGTCCTCTCATTGATAAT+GGG - chr6_4:2582030-2582049 Msa0970920:intron 35.0%
TTTACCCCATTATCAATGAG+AGG + chr6_4:2582038-2582057 None:intergenic 35.0%
!!! AGATTTACGAGGTTTTGACT+TGG + chr6_4:2582087-2582106 None:intergenic 35.0%
ATTGCATCTTGAGATTTACG+AGG + chr6_4:2582098-2582117 None:intergenic 35.0%
!!! GTTGAATGTTTTGGCTTCTT+TGG + chr6_4:2582149-2582168 None:intergenic 35.0%
AGTCGAAATCTGATACTCAA+AGG - chr6_4:2582177-2582196 Msa0970920:intron 35.0%
GTCGAAATCTGATACTCAAA+GGG - chr6_4:2582178-2582197 Msa0970920:intron 35.0%
!! GTTTTTCAAATTCGTGCACA+TGG - chr6_4:2582284-2582303 Msa0970920:intron 35.0%
!! ACATGGGTTAGTGTTAGATT+TGG - chr6_4:2582301-2582320 Msa0970920:intron 35.0%
!! CATGGGTTAGTGTTAGATTT+GGG - chr6_4:2582302-2582321 Msa0970920:intron 35.0%
AAGATGACTCTACCTCAAAA+CGG + chr6_4:2582349-2582368 None:intergenic 35.0%
CTCGTGTTGCATACAATTTA+TGG + chr6_4:2582687-2582706 None:intergenic 35.0%
TAATAGGTCAGTAAGGGAAT+TGG + chr6_4:2582714-2582733 None:intergenic 35.0%
GAACACTAATAGGTCAGTAA+GGG + chr6_4:2582720-2582739 None:intergenic 35.0%
AGAACACTAATAGGTCAGTA+AGG + chr6_4:2582721-2582740 None:intergenic 35.0%
CTGCAATACAGAACACTAAT+AGG + chr6_4:2582730-2582749 None:intergenic 35.0%
CTATTAGTGTTCTGTATTGC+AGG - chr6_4:2582728-2582747 Msa0970920:intron 35.0%
CGATCAATATAACCAACTTC+CGG - chr6_4:2582999-2583018 Msa0970920:CDS 35.0%
GATCAATATAACCAACTTCC+GGG - chr6_4:2583000-2583019 Msa0970920:CDS 35.0%
! CTCAATTTTTGTTGAACTGC+TGG - chr6_4:2583032-2583051 Msa0970920:CDS 35.0%
! AATTTTTACACTACTGCCCT+TGG - chr6_4:2583077-2583096 Msa0970920:CDS 35.0%
ATGTAGTTTGAGAAAGCCAT+AGG - chr6_4:2583109-2583128 Msa0970920:CDS 35.0%
! CACATAGATTTTTCTTCCGG+CGG - chr6_4:2571925-2571944 Msa0970920:three_prime_UTR 40.0%
ATTTAACGTTCGCCGGAAAA+TGG + chr6_4:2571953-2571972 None:intergenic 40.0%
! CGGTTTGAAATGTGATGAGA+CGG + chr6_4:2572138-2572157 None:intergenic 40.0%
CGTCTCATCACATTTCAAAC+CGG - chr6_4:2572136-2572155 Msa0970920:three_prime_UTR 40.0%
! TGAGAAACGACCGTATTTTC+CGG + chr6_4:2572158-2572177 None:intergenic 40.0%
ATTGCGAGCAATTTCATCTC+TGG + chr6_4:2572239-2572258 None:intergenic 40.0%
!! GGATTGGTCCCAAATTTGTT+AGG - chr6_4:2572838-2572857 Msa0970920:intron 40.0%
GGGATTTGTCTCGAATTAGT+CGG - chr6_4:2572976-2572995 Msa0970920:CDS 40.0%
TCTCGAATTAGTCGGTCATT+GGG - chr6_4:2572984-2573003 Msa0970920:CDS 40.0%
!!! ATTTTATTCATGGCGGACAC+GGG + chr6_4:2573033-2573052 None:intergenic 40.0%
!!! GATTTTATTCATGGCGGACA+CGG + chr6_4:2573034-2573053 None:intergenic 40.0%
! GTTGCGGATTTTATTCATGG+CGG + chr6_4:2573040-2573059 None:intergenic 40.0%
GCGGATATCCATTAATGTTG+CGG + chr6_4:2573056-2573075 None:intergenic 40.0%
GGGTTGTAAATGAGTATCCA+TGG + chr6_4:2573492-2573511 None:intergenic 40.0%
TGGATACTCATTTACAACCC+TGG - chr6_4:2573492-2573511 Msa0970920:CDS 40.0%
GGATACTCATTTACAACCCT+GGG - chr6_4:2573493-2573512 Msa0970920:CDS 40.0%
!! CAGTTGTTTCTGGTTGAATG+AGG - chr6_4:2573571-2573590 Msa0970920:intron 40.0%
TCTCTTCTCATGTACGTAGA+AGG + chr6_4:2574085-2574104 None:intergenic 40.0%
TCTACGTACATGAGAAGAGA+AGG - chr6_4:2574085-2574104 Msa0970920:intron 40.0%
ACAAGATCCGATTGTGTATG+CGG - chr6_4:2574308-2574327 Msa0970920:intron 40.0%
TTATCAGATATTCCTTGGGG+TGG - chr6_4:2574357-2574376 Msa0970920:intron 40.0%
CGATTCGAATCATTCCTATG+GGG + chr6_4:2574383-2574402 None:intergenic 40.0%
! CCGATTCGAATCATTCCTAT+GGG + chr6_4:2574384-2574403 None:intergenic 40.0%
CCCATAGGAATGATTCGAAT+CGG - chr6_4:2574381-2574400 Msa0970920:intron 40.0%
!! ACCGATTCGAATCATTCCTA+TGG + chr6_4:2574385-2574404 None:intergenic 40.0%
TAGGAATGATTCGAATCGGT+AGG - chr6_4:2574385-2574404 Msa0970920:intron 40.0%
ATTCGAATCGGTAGGATTTG+TGG - chr6_4:2574393-2574412 Msa0970920:intron 40.0%
TTCGAATCGGTAGGATTTGT+GGG - chr6_4:2574394-2574413 Msa0970920:intron 40.0%
! ACATGACCAGTGTTGTTCAA+TGG - chr6_4:2574551-2574570 Msa0970920:intron 40.0%
! CATGACCAGTGTTGTTCAAT+GGG - chr6_4:2574552-2574571 Msa0970920:intron 40.0%
! ATGACCAGTGTTGTTCAATG+GGG - chr6_4:2574553-2574572 Msa0970920:intron 40.0%
CTTCATAAATTGCCTATGGC+GGG + chr6_4:2574624-2574643 None:intergenic 40.0%
CCTTCATAAATTGCCTATGG+CGG + chr6_4:2574625-2574644 None:intergenic 40.0%
CGCCATAGGCAATTTATGAA+GGG - chr6_4:2574623-2574642 Msa0970920:intron 40.0%
TTATGAAGGGATTCTCGTCA+TGG - chr6_4:2574636-2574655 Msa0970920:intron 40.0%
ATTGTCAATGGCAGAGTCAA+TGG + chr6_4:2574722-2574741 None:intergenic 40.0%
!!! TTTTTGGGTTTTTGGGTGCA+TGG - chr6_4:2574953-2574972 Msa0970920:intron 40.0%
!!! TTTTGGGTTTTTGGGTGCAT+GGG - chr6_4:2574954-2574973 Msa0970920:intron 40.0%
TCTGAGAAAGATTTGCAAGC+TGG - chr6_4:2575392-2575411 Msa0970920:intron 40.0%
! ATTAAGATTTGCTCATCCGG+AGG - chr6_4:2575415-2575434 Msa0970920:intron 40.0%
!! ATTAGACTTGCTGCTAAAGC+TGG - chr6_4:2575537-2575556 Msa0970920:intron 40.0%
CACTGATCCTTCTTATGGAA+AGG - chr6_4:2575653-2575672 Msa0970920:intron 40.0%
CAAAGACAATAGACACAGTG+AGG - chr6_4:2575870-2575889 Msa0970920:intron 40.0%
AATAGACACAGTGAGGAAGA+AGG - chr6_4:2575877-2575896 Msa0970920:intron 40.0%
!! ATTTTATCTGAAACCGCAGC+TGG - chr6_4:2576005-2576024 Msa0970920:intron 40.0%
! AGTGATTTTACAACCAGCTG+CGG + chr6_4:2576021-2576040 None:intergenic 40.0%
GAGAATGAGAAAGAGAGAGA+AGG - chr6_4:2576103-2576122 Msa0970920:intron 40.0%
TAGTAAAGCAAGGATCTGGT+AGG + chr6_4:2576292-2576311 None:intergenic 40.0%
GATTGTAGGGTCACTTCATA+AGG + chr6_4:2576376-2576395 None:intergenic 40.0%
!! TAAGAGTGTTACCAGTGCTT+TGG - chr6_4:2576465-2576484 Msa0970920:intron 40.0%
GAATTTAGAGACCAAAGCAC+TGG + chr6_4:2576479-2576498 None:intergenic 40.0%
CAACACTTGGACTCTTTAGT+TGG - chr6_4:2576991-2577010 Msa0970920:CDS 40.0%
TAGTTGGTCCTTCGTCAAAA+CGG - chr6_4:2577007-2577026 Msa0970920:CDS 40.0%
!! AGCATAAACCGTTTTGACGA+AGG + chr6_4:2577018-2577037 None:intergenic 40.0%
! CTAGATTTCTCTTGATGGTC+TGG + chr6_4:2577210-2577229 None:intergenic 40.0%
TTGGCACTACTCTATCCAAA+GGG + chr6_4:2577246-2577265 None:intergenic 40.0%
GATTACATATGTTCCCTCCA+TGG + chr6_4:2577306-2577325 None:intergenic 40.0%
!! TCGTGTTAACTCTGAAGTCA+TGG - chr6_4:2577455-2577474 Msa0970920:intron 40.0%
TTCAGACGGTTCAACATCAA+TGG - chr6_4:2577479-2577498 Msa0970920:CDS 40.0%
ACATCAATGGCAAGTGTATG+TGG - chr6_4:2577492-2577511 Msa0970920:CDS 40.0%
TTTAACCAACATCACAGCAC+AGG - chr6_4:2577524-2577543 Msa0970920:CDS 40.0%
!! AGTATGGCTTTGATGAATGC+CGG - chr6_4:2577604-2577623 Msa0970920:intron 40.0%
ATGTTCCCTTATTGGAATGC+CGG + chr6_4:2577626-2577645 None:intergenic 40.0%
! ACATGTTGCTGGTATTTCTG+TGG - chr6_4:2577642-2577661 Msa0970920:intron 40.0%
! CATGTTGCTGGTATTTCTGT+GGG - chr6_4:2577643-2577662 Msa0970920:intron 40.0%
CTAAACATCACAGGATACTC+AGG + chr6_4:2577832-2577851 None:intergenic 40.0%
AAACACGTGAATCAGGAATG+GGG + chr6_4:2578064-2578083 None:intergenic 40.0%
TGAAGTCTATGTCACCCAAA+TGG + chr6_4:2578182-2578201 None:intergenic 40.0%
GACATAGACTTCAAGATTGC+TGG - chr6_4:2578189-2578208 Msa0970920:CDS 40.0%
AAGATTGCTGGAACTCGAAA+AGG - chr6_4:2578201-2578220 Msa0970920:CDS 40.0%
CAATTGGATATGAAACCAGC+TGG - chr6_4:2578237-2578256 Msa0970920:intron 40.0%
ATATCTAGTGGAATTCCAGC+TGG + chr6_4:2578255-2578274 None:intergenic 40.0%
TAAAGAACCATGTACCAAGC+AGG - chr6_4:2578344-2578363 Msa0970920:intron 40.0%
AAAGAACCATGTACCAAGCA+GGG - chr6_4:2578345-2578364 Msa0970920:intron 40.0%
GGCAGTTCTTCTCAACAAAT+AGG - chr6_4:2578366-2578385 Msa0970920:intron 40.0%
TGTTGATCTAGCCTCCTTTA+CGG + chr6_4:2578832-2578851 None:intergenic 40.0%
!! AGGAACCTTTCTCTTTTTCG+AGG + chr6_4:2579077-2579096 None:intergenic 40.0%
ATATACACATTGCACAGCCT+AGG - chr6_4:2579166-2579185 Msa0970920:intron 40.0%
GCCCTAGGACATTTGAAAAT+TGG + chr6_4:2579259-2579278 None:intergenic 40.0%
! ATAGGAAGGGTATGGCAATT+TGG - chr6_4:2579431-2579450 Msa0970920:intron 40.0%
GTCAAGAATTTGATTGTGGG+TGG + chr6_4:2579518-2579537 None:intergenic 40.0%
TTAATGGTTCATGCGATGGT+TGG + chr6_4:2579622-2579641 None:intergenic 40.0%
ATGATACCGTACAAATCGGA+TGG + chr6_4:2579694-2579713 None:intergenic 40.0%
GGATTGCTGAAGCATAATTC+AGG + chr6_4:2579800-2579819 None:intergenic 40.0%
AGACAAGACAACTGTTAGTG+TGG - chr6_4:2579882-2579901 Msa0970920:intron 40.0%
TACATGCATGCAACATTCCA+TGG + chr6_4:2579919-2579938 None:intergenic 40.0%
ATGGAATGTTGCATGCATGT+AGG - chr6_4:2579918-2579937 Msa0970920:intron 40.0%
GAGTACAGTCCATTACATTG+TGG + chr6_4:2579967-2579986 None:intergenic 40.0%
ACATGTCCAGAATTTGAGTG+TGG - chr6_4:2580134-2580153 Msa0970920:intron 40.0%
CATGTCCAGAATTTGAGTGT+GGG - chr6_4:2580135-2580154 Msa0970920:intron 40.0%
CATCCACAATCCAATGTGAT+AGG + chr6_4:2580166-2580185 None:intergenic 40.0%
CTATCACATTGGATTGTGGA+TGG - chr6_4:2580164-2580183 Msa0970920:intron 40.0%
ATCACATTGGATTGTGGATG+GGG - chr6_4:2580166-2580185 Msa0970920:intron 40.0%
CATTGACCATCCAATGTGAT+AGG + chr6_4:2580193-2580212 None:intergenic 40.0%
ATGCGTTTGAGCTATCATCA+GGG + chr6_4:2580399-2580418 None:intergenic 40.0%
CAAACGCATGGTATCTTAGT+CGG - chr6_4:2580410-2580429 Msa0970920:intron 40.0%
GTGCCGCACATATATACATT+AGG + chr6_4:2580498-2580517 None:intergenic 40.0%
ACCCTCATCTTATATGGTGA+GGG - chr6_4:2580516-2580535 Msa0970920:intron 40.0%
ACCCTCACCATATAAGATGA+GGG + chr6_4:2580520-2580539 None:intergenic 40.0%
GTGCAATGTATATACGTGCT+TGG + chr6_4:2580545-2580564 None:intergenic 40.0%
GTATATACATTGCACAGCTC+AGG - chr6_4:2580550-2580569 Msa0970920:intron 40.0%
! ATTTTCTACAATCAGGTGCC+CGG - chr6_4:2580983-2581002 Msa0970920:intron 40.0%
CTGAGACATTTGTCTCACTT+AGG + chr6_4:2581196-2581215 None:intergenic 40.0%
CATCACATGGATTTCTGATC+AGG + chr6_4:2581220-2581239 None:intergenic 40.0%
! GTTCAACCTTCTTGTTTGTC+AGG - chr6_4:2581374-2581393 Msa0970920:intron 40.0%
TGAATTTAATGGTGGCAAGC+AGG - chr6_4:2581482-2581501 Msa0970920:intron 40.0%
GAATTTAATGGTGGCAAGCA+GGG - chr6_4:2581483-2581502 Msa0970920:intron 40.0%
ATAACTCCGAAATGTGGAGA+AGG + chr6_4:2581509-2581528 None:intergenic 40.0%
CATGTGATAACTCCGAAATG+TGG + chr6_4:2581515-2581534 None:intergenic 40.0%
TTCGGAGTTATCACATGAAC+CGG - chr6_4:2581518-2581537 Msa0970920:intron 40.0%
CAGCTTTCTTTGATGTGCAT+TGG - chr6_4:2581696-2581715 Msa0970920:intron 40.0%
! TAATTAGTCTCTGATCCTCC+GGG + chr6_4:2581774-2581793 None:intergenic 40.0%
!!! GGTAGTTACTTTTGCAGATG+TGG + chr6_4:2581814-2581833 None:intergenic 40.0%
TACAATTACTGGTGTTTGGG+AGG + chr6_4:2581943-2581962 None:intergenic 40.0%
GCACTGCGTATTACAATTAC+TGG + chr6_4:2581954-2581973 None:intergenic 40.0%
!! TGGTCCTCTCATTGATAATG+GGG - chr6_4:2582031-2582050 Msa0970920:intron 40.0%
!!! TTACGAGGTTTTGACTTGGA+CGG + chr6_4:2582083-2582102 None:intergenic 40.0%
! ATTGATTCTCCATCTCAGTC+AGG - chr6_4:2582116-2582135 Msa0970920:intron 40.0%
!!! TGTTTTGGCTTCTTTGGCAA+GGG + chr6_4:2582143-2582162 None:intergenic 40.0%
!!! ATGTTTTGGCTTCTTTGGCA+AGG + chr6_4:2582144-2582163 None:intergenic 40.0%
ACTGCAAAAGATTTGCCACT+TGG - chr6_4:2582242-2582261 Msa0970920:intron 40.0%
TTAGTGTTAGATTTGGGTGG+AGG - chr6_4:2582308-2582327 Msa0970920:intron 40.0%
AAACGAGACACTAAACTGTG+TGG + chr6_4:2582587-2582606 None:intergenic 40.0%
CAAATATGGAAATCGCGAAG+GGG + chr6_4:2582611-2582630 None:intergenic 40.0%
GCAAATATGGAAATCGCGAA+GGG + chr6_4:2582612-2582631 None:intergenic 40.0%
AGCAAATATGGAAATCGCGA+AGG + chr6_4:2582613-2582632 None:intergenic 40.0%
!! CTCTCAAGCTTTTCTAGCAA+GGG - chr6_4:2582798-2582817 Msa0970920:intron 40.0%
!! CTTTTCTAGCAAGGGAATTC+CGG - chr6_4:2582806-2582825 Msa0970920:intron 40.0%
AATTCCGGTAGTGTTTCCAT+TGG - chr6_4:2582821-2582840 Msa0970920:intron 40.0%
TCATCCAATGGAAACACTAC+CGG + chr6_4:2582828-2582847 None:intergenic 40.0%
AGCAAATATATCCCGGAAGT+TGG + chr6_4:2583014-2583033 None:intergenic 40.0%
! GGCATGCCTTGGTAAATTTT+TGG - chr6_4:2583054-2583073 Msa0970920:CDS 40.0%
AGATTGAATGGTGAACCTCT+TGG - chr6_4:2583146-2583165 Msa0970920:CDS 40.0%
CGGAATGATTTAACGTTCGC+CGG + chr6_4:2571960-2571979 None:intergenic 45.0%
TTCCGATGTCAATTGCACTG+CGG - chr6_4:2571975-2571994 Msa0970920:intron 45.0%
ATCCGCAGTGCAATTGACAT+CGG + chr6_4:2571980-2571999 None:intergenic 45.0%
TGATGTGACGGTGTAAAGTG+CGG + chr6_4:2572024-2572043 None:intergenic 45.0%
ACTTTACACCGTCACATCAG+CGG - chr6_4:2572025-2572044 Msa0970920:intron 45.0%
TTCACGGAGGAATTCGAAGT+CGG - chr6_4:2572109-2572128 Msa0970920:three_prime_UTR 45.0%
!!! TGGAGCTGTTGTTTTGACGA+TGG - chr6_4:2572180-2572199 Msa0970920:three_prime_UTR 45.0%
! CATGTTTGGTTGCTTTCGAG+TGG - chr6_4:2572361-2572380 Msa0970920:CDS 45.0%
!! AGTGTGTATCTTTGGCTCTG+TGG + chr6_4:2572584-2572603 None:intergenic 45.0%
ATCCCATGAGTCTGTATGTG+TGG - chr6_4:2572724-2572743 Msa0970920:intron 45.0%
CACCACACATACAGACTCAT+GGG + chr6_4:2572729-2572748 None:intergenic 45.0%
CTAGAGAGAAACATGCTCCA+AGG + chr6_4:2572757-2572776 None:intergenic 45.0%
CTTGGAGCATGTTTCTCTCT+AGG - chr6_4:2572755-2572774 Msa0970920:intron 45.0%
CATGTTTCTCTCTAGGTCTC+AGG - chr6_4:2572762-2572781 Msa0970920:intron 45.0%
AACACATAAACCGCTAGCAC+TGG + chr6_4:2572789-2572808 None:intergenic 45.0%
AGTGCTAGCGGTTTATGTGT+TGG - chr6_4:2572788-2572807 Msa0970920:intron 45.0%
GTGCTAGCGGTTTATGTGTT+GGG - chr6_4:2572789-2572808 Msa0970920:intron 45.0%
GGACAAGGCGATTACCTTAA+TGG - chr6_4:2572904-2572923 Msa0970920:CDS 45.0%
AAATCCCATCATCCACTAGC+GGG + chr6_4:2572963-2572982 None:intergenic 45.0%
CAAATCCCATCATCCACTAG+CGG + chr6_4:2572964-2572983 None:intergenic 45.0%
GTCTCGAATTAGTCGGTCAT+TGG - chr6_4:2572983-2573002 Msa0970920:CDS 45.0%
TCGGTCATTGGGCCAAATTA+GGG - chr6_4:2572995-2573014 Msa0970920:CDS 45.0%
TATCTGTGCGGGTATCAGTA+AGG + chr6_4:2573439-2573458 None:intergenic 45.0%
TACTGATACCCGCACAGATA+TGG - chr6_4:2573439-2573458 Msa0970920:CDS 45.0%
ACTGATACCCGCACAGATAT+GGG - chr6_4:2573440-2573459 Msa0970920:CDS 45.0%
GAAGAGAAGCAATTTGCGCA+TGG - chr6_4:2574052-2574071 Msa0970920:intron 45.0%
CACAAAAGTTCGCGTTCCTT+AGG + chr6_4:2574115-2574134 None:intergenic 45.0%
! AACGCGAACTTTTGTGTGCT+CGG - chr6_4:2574119-2574138 Msa0970920:CDS 45.0%
GAAACAGAGGTCGAATAGGA+CGG + chr6_4:2574153-2574172 None:intergenic 45.0%
GTTGGAAACAGAGGTCGAAT+AGG + chr6_4:2574157-2574176 None:intergenic 45.0%
ATTCGACCTCTGTTTCCAAC+TGG - chr6_4:2574157-2574176 Msa0970920:CDS 45.0%
GCTAGTGTTCTTTCCTCAGA+TGG - chr6_4:2574282-2574301 Msa0970920:intron 45.0%
GCATTAGCCGCATACACAAT+CGG + chr6_4:2574318-2574337 None:intergenic 45.0%
TAGGATTTGTGGGCAGTTTG+TGG - chr6_4:2574404-2574423 Msa0970920:intron 45.0%
GTTTGTGGTGAATCCTACGA+TGG - chr6_4:2574419-2574438 Msa0970920:intron 45.0%
! TGACCAGTGTTGTTCAATGG+GGG - chr6_4:2574554-2574573 Msa0970920:intron 45.0%
! GATATTTCTACACCCGCCAT+AGG - chr6_4:2574609-2574628 Msa0970920:intron 45.0%
CCGCCATAGGCAATTTATGA+AGG - chr6_4:2574622-2574641 Msa0970920:intron 45.0%
AGTCAATGGCAGATGGCAAA+AGG + chr6_4:2574708-2574727 None:intergenic 45.0%
ACTTAAGCTGAGCTGCAATG+TGG + chr6_4:2575303-2575322 None:intergenic 45.0%
TCTCAGATATCTCACGAGCT+TGG + chr6_4:2575379-2575398 None:intergenic 45.0%
! TTTTTGCCACACTCTTGCAG+CGG - chr6_4:2576522-2576541 Msa0970920:intron 45.0%
!!! GGATCTGCAGATTTTTTCCG+TGG - chr6_4:2576791-2576810 Msa0970920:intron 45.0%
!!! TTTTTTCCGTGGCGAAACAC+AGG - chr6_4:2576802-2576821 Msa0970920:intron 45.0%
ATTTGACCTGTGTTTCGCCA+CGG + chr6_4:2576811-2576830 None:intergenic 45.0%
GTCCTATGTACAGTAACGCT+TGG - chr6_4:2576952-2576971 Msa0970920:CDS 45.0%
CTCCAAGCGTTACTGTACAT+AGG + chr6_4:2576957-2576976 None:intergenic 45.0%
ACCTAAAGACGCTCAACACT+TGG - chr6_4:2576978-2576997 Msa0970920:CDS 45.0%
!! TCCAAGTGTTGAGCGTCTTT+AGG + chr6_4:2576982-2577001 None:intergenic 45.0%
! AGTTTTCCACCCTACTGCAT+AGG - chr6_4:2577045-2577064 Msa0970920:intron 45.0%
CCAACTTCACCTATGCAGTA+GGG + chr6_4:2577057-2577076 None:intergenic 45.0%
CCTACTGCATAGGTGAAGTT+GGG - chr6_4:2577055-2577074 Msa0970920:intron 45.0%
ATAGGTGAAGTTGGGAAACG+TGG - chr6_4:2577063-2577082 Msa0970920:intron 45.0%
GGAAACGTGGTGGTCTAAAT+AGG - chr6_4:2577076-2577095 Msa0970920:intron 45.0%
GGTCTAAATAGGCGTGAAGT+TGG - chr6_4:2577087-2577106 Msa0970920:intron 45.0%
! AATAGGCGTGAAGTTGGTCA+TGG - chr6_4:2577093-2577112 Msa0970920:intron 45.0%
GTTGGCACTACTCTATCCAA+AGG + chr6_4:2577247-2577266 None:intergenic 45.0%
ATGGGAGGTAATCTTGTTCG+AGG + chr6_4:2577287-2577306 None:intergenic 45.0%
TCGAACAAGATTACCTCCCA+TGG - chr6_4:2577286-2577305 Msa0970920:intron 45.0%
AACAAGATTACCTCCCATGG+AGG - chr6_4:2577289-2577308 Msa0970920:intron 45.0%
ACAAGATTACCTCCCATGGA+GGG - chr6_4:2577290-2577309 Msa0970920:intron 45.0%
TTCAGCAAGTGCTCCTACAA+AGG + chr6_4:2577385-2577404 None:intergenic 45.0%
! TCTGAAGTCATGGCTTCAGA+CGG - chr6_4:2577465-2577484 Msa0970920:CDS 45.0%
TCAATGGCAAGTGTATGTGG+AGG - chr6_4:2577495-2577514 Msa0970920:CDS 45.0%
CTTTCTGTTTGCAGCGAGTA+TGG - chr6_4:2577588-2577607 Msa0970920:intron 45.0%
TGAATGCCGGCATTCCAATA+AGG - chr6_4:2577617-2577636 Msa0970920:intron 45.0%
GAATGCCGGCATTCCAATAA+GGG - chr6_4:2577618-2577637 Msa0970920:intron 45.0%
CCAGCAACATGTTCCCTTAT+TGG + chr6_4:2577634-2577653 None:intergenic 45.0%
CCAATAAGGGAACATGTTGC+TGG - chr6_4:2577631-2577650 Msa0970920:intron 45.0%
AGTGAACTTGATCCATGCAC+AGG - chr6_4:2577673-2577692 Msa0970920:intron 45.0%
AAGGGCTTGGAAGACCATTT+GGG - chr6_4:2578165-2578184 Msa0970920:CDS 45.0%
! TGTAGATGGGCTTTATGTGC+AGG + chr6_4:2578297-2578316 None:intergenic 45.0%
ACGCTCTTCGTCGCTTAATT+GGG - chr6_4:2578521-2578540 Msa0970920:intron 45.0%
! TGTGTGAGATTTTGTGCGTG+AGG - chr6_4:2578634-2578653 Msa0970920:intron 45.0%
GTAAAGGAGGCTAGATCAAC+AGG - chr6_4:2578831-2578850 Msa0970920:intron 45.0%
GAGGCTAGATCAACAGGTTA+AGG - chr6_4:2578837-2578856 Msa0970920:intron 45.0%
ATCATACCAAGCTCTTACCG+AGG - chr6_4:2578938-2578957 Msa0970920:intron 45.0%
ATTGCACAGCCTAGGAACTT+CGG - chr6_4:2579174-2579193 Msa0970920:intron 45.0%
! GCAGTCATTTGTTGACCAAG+CGG - chr6_4:2579464-2579483 Msa0970920:intron 45.0%
TACTTGACCATCCATATGCC+AGG - chr6_4:2579491-2579510 Msa0970920:intron 45.0%
AATTTGATTGTGGGTGGACC+TGG + chr6_4:2579512-2579531 None:intergenic 45.0%
! GTGTGGCATTTTCAGAACCA+TGG - chr6_4:2579899-2579918 Msa0970920:intron 45.0%
TCCAGAATTTGAGTGTGGGT+GGG - chr6_4:2580139-2580158 Msa0970920:intron 45.0%
GGACCTATCACATTGGATTG+TGG - chr6_4:2580160-2580179 Msa0970920:intron 45.0%
TGCGTTTGAGCTATCATCAG+GGG + chr6_4:2580398-2580417 None:intergenic 45.0%
CATGCGTTTGAGCTATCATC+AGG + chr6_4:2580400-2580419 None:intergenic 45.0%
CTGATGATAGCTCAAACGCA+TGG - chr6_4:2580398-2580417 Msa0970920:intron 45.0%
CACCCTCATCTTATATGGTG+AGG - chr6_4:2580515-2580534 Msa0970920:intron 45.0%
CACCCTCACCATATAAGATG+AGG + chr6_4:2580521-2580540 None:intergenic 45.0%
TGCACATCAAAGAAAGCTGC+TGG + chr6_4:2581695-2581714 None:intergenic 45.0%
! TGCATTGGCCAAGATGTTCA+TGG - chr6_4:2581711-2581730 Msa0970920:intron 45.0%
ATACTAGACGTGTCCCAAAC+TGG + chr6_4:2581849-2581868 None:intergenic 45.0%
GGAGGAGAAATCTATCAGCT+TGG - chr6_4:2581989-2582008 Msa0970920:intron 45.0%
TCTGATACTCAAAGGGCAGA+AGG - chr6_4:2582185-2582204 Msa0970920:intron 45.0%
CTGATACTCAAAGGGCAGAA+GGG - chr6_4:2582186-2582205 Msa0970920:intron 45.0%
! GGGTTAGTGTTAGATTTGGG+TGG - chr6_4:2582305-2582324 Msa0970920:intron 45.0%
! TCGAGGAATGTACCGTTTTG+AGG - chr6_4:2582334-2582353 Msa0970920:intron 45.0%
GGCAAAAGAGGTAAAAGACG+AGG + chr6_4:2582415-2582434 None:intergenic 45.0%
AGGTCAGTAAGGGAATTGGA+TGG + chr6_4:2582710-2582729 None:intergenic 45.0%
TGTTCTGTATTGCAGGGAGA+TGG - chr6_4:2582735-2582754 Msa0970920:intron 45.0%
GTTCTGTATTGCAGGGAGAT+GGG - chr6_4:2582736-2582755 Msa0970920:intron 45.0%
ATTGCAGGGAGATGGGAAAA+CGG - chr6_4:2582743-2582762 Msa0970920:intron 45.0%
! AGATGGGAAAACGGACTTGA+AGG - chr6_4:2582752-2582771 Msa0970920:intron 45.0%
!! GCTCTCAAGCTTTTCTAGCA+AGG - chr6_4:2582797-2582816 Msa0970920:intron 45.0%
GTAGACCACCAAGATGATGA+TGG - chr6_4:2582893-2582912 Msa0970920:intron 45.0%
CAGCTGTAAGAATTCCTTCC+AGG + chr6_4:2582919-2582938 None:intergenic 45.0%
!! CTCTAAGACTCATTCGCCTA+TGG + chr6_4:2583128-2583147 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTTAAAC+TGG - chr6_4:2573288-2573307 Msa0970920:CDS 5.0%
!!! TTTTTTTTTTTTTTTAAACT+GGG - chr6_4:2573289-2573308 Msa0970920:CDS 5.0%
!! TAAATTTATAAAAATAACTT+AGG - chr6_4:2574776-2574795 Msa0970920:intron 5.0%
!!! AAAATAAATTTTAAACATTA+GGG + chr6_4:2578469-2578488 None:intergenic 5.0%
!!! AAAAATAAATTTTAAACATT+AGG + chr6_4:2578470-2578489 None:intergenic 5.0%
!!! TTTATTTATTTTTTTTTTGA+AGG - chr6_4:2583179-2583198 Msa0970920:CDS 5.0%
GCGAGCAATTTCATCTCTGG+AGG + chr6_4:2572236-2572255 None:intergenic 50.0%
CCACCACACATACAGACTCA+TGG + chr6_4:2572730-2572749 None:intergenic 50.0%
CCATGAGTCTGTATGTGTGG+TGG - chr6_4:2572727-2572746 Msa0970920:intron 50.0%
TGAGTCTGTATGTGTGGTGG+TGG - chr6_4:2572730-2572749 Msa0970920:intron 50.0%
! ATTGGCCTGCTAGTGGATGA+TGG - chr6_4:2572816-2572835 Msa0970920:intron 50.0%
! TTGGCCTGCTAGTGGATGAT+GGG - chr6_4:2572817-2572836 Msa0970920:intron 50.0%
CAATCCCATCATCCACTAGC+AGG + chr6_4:2572824-2572843 None:intergenic 50.0%
!! CTGCTAGTGGATGATGGGAT+TGG - chr6_4:2572822-2572841 Msa0970920:intron 50.0%
AAAAGTCCCTGCGGCTATCA+CGG - chr6_4:2572881-2572900 Msa0970920:CDS 50.0%
AATCCCATCATCCACTAGCG+GGG + chr6_4:2572962-2572981 None:intergenic 50.0%
GTCGGTCATTGGGCCAAATT+AGG - chr6_4:2572994-2573013 Msa0970920:CDS 50.0%
TTAATGGTATCCGTGCCCGT+TGG - chr6_4:2573133-2573152 Msa0970920:CDS 50.0%
CTGATACCCGCACAGATATG+GGG - chr6_4:2573441-2573460 Msa0970920:CDS 50.0%
TAAACTCGCTATCTGGCCCA+GGG + chr6_4:2573512-2573531 None:intergenic 50.0%
TTAAACTCGCTATCTGGCCC+AGG + chr6_4:2573513-2573532 None:intergenic 50.0%
!! GAGAAGAGAAGGTGCTCCTA+AGG - chr6_4:2574096-2574115 Msa0970920:intron 50.0%
CGGATCTTGTGTTCCATCTG+AGG + chr6_4:2574298-2574317 None:intergenic 50.0%
GGTGAATCCTACGATGGATG+AGG - chr6_4:2574425-2574444 Msa0970920:intron 50.0%
TGACCCCCATTGAACAACAC+TGG + chr6_4:2574560-2574579 None:intergenic 50.0%
! ATTCTTCCACCGTGGTGGAA+TGG - chr6_4:2574579-2574598 Msa0970920:intron 50.0%
TGAAGGGATTCTCGTCATGG+TGG - chr6_4:2574639-2574658 Msa0970920:intron 50.0%
! GCTGCATTGGCGTGCTTATA+TGG - chr6_4:2574670-2574689 Msa0970920:intron 50.0%
ATGGCAGAGTCAATGGCAGA+TGG + chr6_4:2574715-2574734 None:intergenic 50.0%
ACACAGTGAGGAAGAAGGTG+TGG - chr6_4:2575882-2575901 Msa0970920:intron 50.0%
GCAGAAGGATCCAGAGTTGA+TGG - chr6_4:2576707-2576726 Msa0970920:intron 50.0%
CATCCAGCTTCGCAGTACAA+GGG + chr6_4:2576755-2576774 None:intergenic 50.0%
CTGTACATAGGACCTGTGCA+TGG + chr6_4:2576945-2576964 None:intergenic 50.0%
ACTTCACCTATGCAGTAGGG+TGG + chr6_4:2577054-2577073 None:intergenic 50.0%
CCCTACTGCATAGGTGAAGT+TGG - chr6_4:2577054-2577073 Msa0970920:intron 50.0%
CCCAACTTCACCTATGCAGT+AGG + chr6_4:2577058-2577077 None:intergenic 50.0%
ACATATGTTCCCTCCATGGG+AGG + chr6_4:2577302-2577321 None:intergenic 50.0%
TCCATGCACAGGCGAAATAG+CGG - chr6_4:2577684-2577703 Msa0970920:CDS 50.0%
GAAGGGCTTGGAAGACCATT+TGG - chr6_4:2578164-2578183 Msa0970920:CDS 50.0%
AGGAGTTACTGCCGCTCAAT+TGG - chr6_4:2578221-2578240 Msa0970920:CDS 50.0%
TTGAGAAGAACTGCCCTGCT+TGG + chr6_4:2578361-2578380 None:intergenic 50.0%
GACGCTCTTCGTCGCTTAAT+TGG - chr6_4:2578520-2578539 Msa0970920:intron 50.0%
TCGTCGCTTAATTGGGCCAA+TGG - chr6_4:2578528-2578547 Msa0970920:intron 50.0%
CGTCGCTTAATTGGGCCAAT+GGG - chr6_4:2578529-2578548 Msa0970920:intron 50.0%
CAAAAGCCTCGGTAAGAGCT+TGG + chr6_4:2578947-2578966 None:intergenic 50.0%
! CAAGCTCTTACCGAGGCTTT+TGG - chr6_4:2578945-2578964 Msa0970920:intron 50.0%
!! TTTTGGTGTGCCTTGGCCTT+GGG - chr6_4:2578962-2578981 Msa0970920:intron 50.0%
CAAAAGCCTCGGTAAGAGCT+TGG + chr6_4:2578947-2578966 None:intergenic 50.0%
! CAAGCTCTTACCGAGGCTTT+TGG - chr6_4:2578945-2578964 Msa0970920:intron 50.0%
!! TTTTGGCATGCCTTGGCCTT+GGG - chr6_4:2579019-2579038 Msa0970920:intron 50.0%
!! ATGCCTTGGCCTTGGGAATA+GGG - chr6_4:2579026-2579045 Msa0970920:intron 50.0%
CTCACATTGCCGAAGTTCCT+AGG + chr6_4:2579186-2579205 None:intergenic 50.0%
GTATCAGAGCTTGATGCCCT+AGG + chr6_4:2579274-2579293 None:intergenic 50.0%
! GTCATTTGTTGACCAAGCGG+AGG - chr6_4:2579467-2579486 Msa0970920:intron 50.0%
ATGGTCAAGTATCCTCCGCT+TGG + chr6_4:2579482-2579501 None:intergenic 50.0%
GTCCAGAATTTGAGTGTGGG+TGG - chr6_4:2580138-2580157 Msa0970920:intron 50.0%
TCCCACCCACACTCAAATTC+TGG + chr6_4:2580143-2580162 None:intergenic 50.0%
TGGATGGGGACCTATCACAT+TGG - chr6_4:2580180-2580199 Msa0970920:intron 50.0%
TGGGGACCTATCACATTGGA+TGG - chr6_4:2580184-2580203 Msa0970920:intron 50.0%
TGCGGCACCCTCATCTTATA+TGG - chr6_4:2580510-2580529 Msa0970920:intron 50.0%
ATTGCACAGCTCAGGATCGT+AGG - chr6_4:2580558-2580577 Msa0970920:intron 50.0%
TCAGGATCGTAGGCAATGTG+TGG - chr6_4:2580568-2580587 Msa0970920:intron 50.0%
CAAGGAGGATCAGAACTAGC+AGG + chr6_4:2580775-2580794 None:intergenic 50.0%
TTCCATCTCCTACAGACAGC+CGG + chr6_4:2581005-2581024 None:intergenic 50.0%
GTGGGCCGTGAAATTGAAGT+TGG - chr6_4:2581408-2581427 Msa0970920:intron 50.0%
GGCCGTGAAATTGAAGTTGG+AGG - chr6_4:2581411-2581430 Msa0970920:intron 50.0%
CAACAGTTGGGCACCAGTTT+GGG - chr6_4:2581833-2581852 Msa0970920:intron 50.0%
CAGTGCTGCAGAATGTGATG+AGG - chr6_4:2581968-2581987 Msa0970920:intron 50.0%
TGCTGCAGAATGTGATGAGG+AGG - chr6_4:2581971-2581990 Msa0970920:intron 50.0%
! GGGAAAACGGACTTGAAGGT+AGG - chr6_4:2582756-2582775 Msa0970920:intron 50.0%
TTCTTTCACGAGACAGCCCA+TGG - chr6_4:2582868-2582887 Msa0970920:intron 50.0%
! TCTTGGTGGTCTACGTCCAT+GGG + chr6_4:2582887-2582906 None:intergenic 50.0%
! ATCTTGGTGGTCTACGTCCA+TGG + chr6_4:2582888-2582907 None:intergenic 50.0%
CTTCCAGGCCATCATCATCT+TGG + chr6_4:2582904-2582923 None:intergenic 50.0%
!! CAAGATGATGATGGCCTGGA+AGG - chr6_4:2582902-2582921 Msa0970920:intron 50.0%
CGGTGTAAAGTGCGGAGAAG+TGG + chr6_4:2572016-2572035 None:intergenic 55.0%
TTAACGTGTGCGCGCGTGTA+TGG + chr6_4:2572615-2572634 None:intergenic 55.0%
!! GTATGTGTGGTGGTGGTCCT+TGG - chr6_4:2572737-2572756 Msa0970920:intron 55.0%
! GGGTTCAATTGGCCTGCTAG+TGG - chr6_4:2572809-2572828 Msa0970920:intron 55.0%
AAAGTCCCTGCGGCTATCAC+GGG - chr6_4:2572882-2572901 Msa0970920:CDS 55.0%
!!! CATGGCGGACACGGGTATTT+TGG + chr6_4:2573025-2573044 None:intergenic 55.0%
GTATCCGTGCCCGTTGGTAT+TGG - chr6_4:2573139-2573158 Msa0970920:CDS 55.0%
GGTACCAATACCAACGGGCA+CGG + chr6_4:2573146-2573165 None:intergenic 55.0%
ATACCCGCACAGATATGGGG+CGG - chr6_4:2573444-2573463 Msa0970920:CDS 55.0%
!! TCTCGTCATGGTGGTGCCAT+AGG - chr6_4:2574648-2574667 Msa0970920:intron 55.0%
AAGCACGCCAATGCAGCCTA+TGG + chr6_4:2574667-2574686 None:intergenic 55.0%
AGACCCTTGTACTGCGAAGC+TGG - chr6_4:2576749-2576768 Msa0970920:intron 55.0%
GCATCCAGCTTCGCAGTACA+AGG + chr6_4:2576756-2576775 None:intergenic 55.0%
GGATGCATTTCCAAGCTGCG+TGG - chr6_4:2576770-2576789 Msa0970920:intron 55.0%
ATCTGCAGATCCACGCAGCT+TGG + chr6_4:2576783-2576802 None:intergenic 55.0%
GGTGAAGTTGGGAAACGTGG+TGG - chr6_4:2577066-2577085 Msa0970920:intron 55.0%
CTAGGCCTGTGCTGTGATGT+TGG + chr6_4:2577532-2577551 None:intergenic 55.0%
! TCCGCTATTTCGCCTGTGCA+TGG + chr6_4:2577688-2577707 None:intergenic 55.0%
GAACTGCCCTGCTTGGTACA+TGG + chr6_4:2578354-2578373 None:intergenic 55.0%
CCAAGGCACACCAAAAGCCT+CGG + chr6_4:2578958-2578977 None:intergenic 55.0%
!! CTTTTGGTGTGCCTTGGCCT+TGG - chr6_4:2578961-2578980 Msa0970920:intron 55.0%
!! TGTGCCTTGGCCTTGGGAAT+AGG - chr6_4:2578968-2578987 Msa0970920:intron 55.0%
!! GTGCCTTGGCCTTGGGAATA+GGG - chr6_4:2578969-2578988 Msa0970920:intron 55.0%
AAGCCTCGGTAAGAGCTTGG+TGG + chr6_4:2578944-2578963 None:intergenic 55.0%
CCAAGGCATGCCAAAAGCCT+CGG + chr6_4:2579015-2579034 None:intergenic 55.0%
! CTTTTGGCATGCCTTGGCCT+TGG - chr6_4:2579018-2579037 Msa0970920:intron 55.0%
!! CATGCCTTGGCCTTGGGAAT+AGG - chr6_4:2579025-2579044 Msa0970920:intron 55.0%
AGGATGCCACCCTATTCCCA+AGG + chr6_4:2579038-2579057 None:intergenic 55.0%
GCTACTATCATGCCTAGCGC+AGG - chr6_4:2579226-2579245 Msa0970920:intron 55.0%
TTGTGGGTGGACCTGGCATA+TGG + chr6_4:2579505-2579524 None:intergenic 55.0%
GTGGGTGGGACCTATCACAT+TGG - chr6_4:2580153-2580172 Msa0970920:intron 55.0%
GGCAAGTTTAGGCCCATGCT+AGG - chr6_4:2580443-2580462 Msa0970920:intron 55.0%
TTAGGCCCATGCTAGGTGTG+AGG - chr6_4:2580450-2580469 Msa0970920:intron 55.0%
TAGGCCCATGCTAGGTGTGA+GGG - chr6_4:2580451-2580470 Msa0970920:intron 55.0%
TCCATCTCCTACAGACAGCC+GGG + chr6_4:2581004-2581023 None:intergenic 55.0%
GCAGGGCCTTCTCCACATTT+CGG - chr6_4:2581500-2581519 Msa0970920:intron 55.0%
! ACCACGCAAAGCCGCTTTGA+GGG + chr6_4:2581751-2581770 None:intergenic 55.0%
CCAAACTGGTGCCCAACTGT+TGG + chr6_4:2581835-2581854 None:intergenic 55.0%
CCAACAGTTGGGCACCAGTT+TGG - chr6_4:2581832-2581851 Msa0970920:intron 55.0%
ACTGGTGTTTGGGAGGCTGA+GGG + chr6_4:2581936-2581955 None:intergenic 55.0%
TACTGGTGTTTGGGAGGCTG+AGG + chr6_4:2581937-2581956 None:intergenic 55.0%
GATTTGGGTGGAGGAGTTCG+AGG - chr6_4:2582317-2582336 Msa0970920:intron 55.0%
CCAGGCCATCATCATCTTGG+TGG + chr6_4:2582901-2582920 None:intergenic 55.0%
!! CCACCAAGATGATGATGGCC+TGG - chr6_4:2582898-2582917 Msa0970920:intron 55.0%
TTGAACTGCTGGGCATGCCT+TGG - chr6_4:2583043-2583062 Msa0970920:CDS 55.0%
!! CTTCCGGCGGAGCCATTTTC+CGG - chr6_4:2571938-2571957 Msa0970920:three_prime_UTR 60.0%
! TCCCGCCGCACATTTTCCTC+CGG - chr6_4:2572049-2572068 Msa0970920:three_prime_UTR 60.0%
CGTCGCCGGAGGAAAATGTG+CGG + chr6_4:2572057-2572076 None:intergenic 60.0%
! CGCACATTTTCCTCCGGCGA+CGG - chr6_4:2572055-2572074 Msa0970920:three_prime_UTR 60.0%
GGTCTCAGGTCCAGTGCTAG+CGG - chr6_4:2572776-2572795 Msa0970920:intron 60.0%
AAGTCCCTGCGGCTATCACG+GGG - chr6_4:2572883-2572902 Msa0970920:CDS 60.0%
TTGTCCCCGTGATAGCCGCA+GGG + chr6_4:2572890-2572909 None:intergenic 60.0%
ATCCAATTGGGCCCCGCTAG+TGG - chr6_4:2572948-2572967 Msa0970920:CDS 60.0%
ATCCACTAGCGGGGCCCAAT+TGG + chr6_4:2572953-2572972 None:intergenic 60.0%
TACCCGCACAGATATGGGGC+GGG - chr6_4:2573445-2573464 Msa0970920:CDS 60.0%
ATTCCTTGGGGTGGCCCCAT+AGG - chr6_4:2574366-2574385 Msa0970920:intron 60.0%
ATTCCTATGGGGCCACCCCA+AGG + chr6_4:2574372-2574391 None:intergenic 60.0%
TGGGGGTCATTCTTCCACCG+TGG - chr6_4:2574571-2574590 Msa0970920:intron 60.0%
GGGTCATTCTTCCACCGTGG+TGG - chr6_4:2574574-2574593 Msa0970920:intron 60.0%
TCTGCCACGCCATTCCACCA+CGG + chr6_4:2574591-2574610 None:intergenic 60.0%
!! GGTGGTGCCATAGGCTGCAT+TGG - chr6_4:2574657-2574676 Msa0970920:intron 60.0%
CTGTTGCCGCTGCAAGAGTG+TGG + chr6_4:2576531-2576550 None:intergenic 60.0%
!! CCGAGGCTTTTGGTGTGCCT+TGG - chr6_4:2578955-2578974 Msa0970920:intron 60.0%
CCACCCTATTCCCAAGGCCA+AGG + chr6_4:2578975-2578994 None:intergenic 60.0%
!! CCTTGGCCTTGGGAATAGGG+TGG - chr6_4:2578972-2578991 Msa0970920:intron 60.0%
TGGAGGCCACCCTATTCCCA+AGG + chr6_4:2578981-2579000 None:intergenic 60.0%
! CCTCGGTAAGAGCTTGGTGG+AGG + chr6_4:2578998-2579017 None:intergenic 60.0%
CCTCCACCAAGCTCTTACCG+AGG - chr6_4:2578995-2579014 Msa0970920:intron 60.0%
! CCGAGGCTTTTGGCATGCCT+TGG - chr6_4:2579012-2579031 Msa0970920:intron 60.0%
CCACCCTATTCCCAAGGCCA+AGG + chr6_4:2578975-2578994 None:intergenic 60.0%
!! CCTTGGCCTTGGGAATAGGG+TGG - chr6_4:2578972-2578991 Msa0970920:intron 60.0%
TATCATGCCTAGCGCAGGCC+TGG - chr6_4:2579231-2579250 Msa0970920:intron 60.0%
ATTGGATCCAGGCCTGCGCT+AGG + chr6_4:2579241-2579260 None:intergenic 60.0%
GGGTGGACCTGGCATATGGA+TGG + chr6_4:2579501-2579520 None:intergenic 60.0%
CCCACCCTCACACCTAGCAT+GGG + chr6_4:2580458-2580477 None:intergenic 60.0%
CCCATGCTAGGTGTGAGGGT+GGG - chr6_4:2580455-2580474 Msa0970920:intron 60.0%
TCCCTCAAAGCGGCTTTGCG+TGG - chr6_4:2581747-2581766 Msa0970920:intron 60.0%
! GACCACGCAAAGCCGCTTTG+AGG + chr6_4:2581752-2581771 None:intergenic 60.0%
AAAGCGGCTTTGCGTGGTCC+CGG - chr6_4:2581753-2581772 Msa0970920:intron 60.0%
CTGGTGTTTGGGAGGCTGAG+GGG + chr6_4:2581935-2581954 None:intergenic 60.0%
GGCAAGGGACCTGACTGAGA+TGG + chr6_4:2582128-2582147 None:intergenic 60.0%
TCGCCGGAAAATGGCTCCGC+CGG + chr6_4:2571944-2571963 None:intergenic 65.0%
GCCGGAGGAAAATGTGCGGC+GGG + chr6_4:2572053-2572072 None:intergenic 65.0%
CGCCGGAGGAAAATGTGCGG+CGG + chr6_4:2572054-2572073 None:intergenic 65.0%
! TTTTCCTCCGGCGACGGCGA+TGG - chr6_4:2572061-2572080 Msa0970920:three_prime_UTR 65.0%
TCCTGAACCATCGCCGTCGC+CGG + chr6_4:2572071-2572090 None:intergenic 65.0%
CTTGTCCCCGTGATAGCCGC+AGG + chr6_4:2572891-2572910 None:intergenic 65.0%
CTGCGGCTATCACGGGGACA+AGG - chr6_4:2572889-2572908 Msa0970920:CDS 65.0%
! TGGGCCCCGCTAGTGGATGA+TGG - chr6_4:2572955-2572974 Msa0970920:CDS 65.0%
! GGGCCCCGCTAGTGGATGAT+GGG - chr6_4:2572956-2572975 Msa0970920:CDS 65.0%
TGCCCGCCCCATATCTGTGC+GGG + chr6_4:2573450-2573469 None:intergenic 65.0%
GTGCCCGCCCCATATCTGTG+CGG + chr6_4:2573451-2573470 None:intergenic 65.0%
GCACAGATATGGGGCGGGCA+CGG - chr6_4:2573450-2573469 Msa0970920:CDS 65.0%
! TCCACCGTGGTGGAATGGCG+TGG - chr6_4:2574584-2574603 Msa0970920:intron 65.0%
GCCCATGCTAGGTGTGAGGG+TGG - chr6_4:2580454-2580473 Msa0970920:intron 65.0%
GCCCACCCTCACACCTAGCA+TGG + chr6_4:2580459-2580478 None:intergenic 65.0%
TCAGGTGCCCGGCTGTCTGT+AGG - chr6_4:2580994-2581013 Msa0970920:intron 65.0%
GCCCGGCTGTCTGTAGGAGA+TGG - chr6_4:2581000-2581019 Msa0970920:CDS 65.0%
GGCGGGAGCCGCTGATGTGA+CGG + chr6_4:2572036-2572055 None:intergenic 70.0%
TGAACCATCGCCGTCGCCGG+AGG + chr6_4:2572068-2572087 None:intergenic 70.0%
TCCGGCGACGGCGATGGTTC+AGG - chr6_4:2572067-2572086 Msa0970920:three_prime_UTR 70.0%
GCCACGCCATTCCACCACGG+TGG + chr6_4:2574588-2574607 None:intergenic 70.0%
GCGGCTTTGCGTGGTCCCGG+AGG - chr6_4:2581756-2581775 Msa0970920:intron 75.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 2571904 2583291 2571904 ID=Msa0970920;Name=Msa0970920
chr6_4 mRNA 2571904 2583291 2571904 ID=Msa0970920-mRNA-1;Parent=Msa0970920;Name=Msa0970920-mRNA-1;_AED=0.06;_eAED=0.06;_QI=76|1|1|1|0.93|0.88|17|401|972
chr6_4 exon 2571904 2571991 2571904 ID=Msa0970920-mRNA-1:exon:1257;Parent=Msa0970920-mRNA-1
chr6_4 exon 2572028 2572445 2572028 ID=Msa0970920-mRNA-1:exon:1256;Parent=Msa0970920-mRNA-1
chr6_4 exon 2572840 2573535 2572840 ID=Msa0970920-mRNA-1:exon:1255;Parent=Msa0970920-mRNA-1
chr6_4 exon 2573656 2573799 2573656 ID=Msa0970920-mRNA-1:exon:1254;Parent=Msa0970920-mRNA-1
chr6_4 exon 2574118 2574197 2574118 ID=Msa0970920-mRNA-1:exon:1253;Parent=Msa0970920-mRNA-1
chr6_4 exon 2576612 2576695 2576612 ID=Msa0970920-mRNA-1:exon:1252;Parent=Msa0970920-mRNA-1
chr6_4 exon 2576808 2577027 2576808 ID=Msa0970920-mRNA-1:exon:1251;Parent=Msa0970920-mRNA-1
chr6_4 exon 2577463 2577593 2577463 ID=Msa0970920-mRNA-1:exon:1250;Parent=Msa0970920-mRNA-1
chr6_4 exon 2577679 2577804 2577679 ID=Msa0970920-mRNA-1:exon:1249;Parent=Msa0970920-mRNA-1
chr6_4 exon 2578081 2578243 2578081 ID=Msa0970920-mRNA-1:exon:1248;Parent=Msa0970920-mRNA-1
chr6_4 exon 2578372 2578509 2578372 ID=Msa0970920-mRNA-1:exon:1247;Parent=Msa0970920-mRNA-1
chr6_4 exon 2579297 2579416 2579297 ID=Msa0970920-mRNA-1:exon:1246;Parent=Msa0970920-mRNA-1
chr6_4 exon 2579521 2579682 2579521 ID=Msa0970920-mRNA-1:exon:1245;Parent=Msa0970920-mRNA-1
chr6_4 exon 2579759 2579884 2579759 ID=Msa0970920-mRNA-1:exon:1244;Parent=Msa0970920-mRNA-1
chr6_4 exon 2580749 2580919 2580749 ID=Msa0970920-mRNA-1:exon:1243;Parent=Msa0970920-mRNA-1
chr6_4 exon 2580997 2581152 2580997 ID=Msa0970920-mRNA-1:exon:1242;Parent=Msa0970920-mRNA-1
chr6_4 exon 2582919 2583291 2582919 ID=Msa0970920-mRNA-1:exon:1241;Parent=Msa0970920-mRNA-1
chr6_4 five_prime_UTR 2583216 2583291 2583216 ID=Msa0970920-mRNA-1:five_prime_utr;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2582919 2583215 2582919 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2580997 2581152 2580997 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2580749 2580919 2580749 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2579759 2579884 2579759 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2579521 2579682 2579521 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2579297 2579416 2579297 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2578372 2578509 2578372 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2578081 2578243 2578081 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2577679 2577804 2577679 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2577463 2577593 2577463 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2576808 2577027 2576808 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2576612 2576695 2576612 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2574118 2574197 2574118 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2573656 2573799 2573656 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2572840 2573535 2572840 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 CDS 2572341 2572445 2572341 ID=Msa0970920-mRNA-1:cds;Parent=Msa0970920-mRNA-1
chr6_4 three_prime_UTR 2572028 2572340 2572028 ID=Msa0970920-mRNA-1:three_prime_utr;Parent=Msa0970920-mRNA-1
chr6_4 three_prime_UTR 2571904 2571991 2571904 ID=Msa0970920-mRNA-1:three_prime_utr;Parent=Msa0970920-mRNA-1
Gene Sequence

>Msa0970920

ATGTCAATTGCACTGCGGATACGAAATGCAAAGCCACTTCTCCGCACTTTACACCGTCACATCAGCGGCTCCCGCCGCACATTTTCCTCCGGCGACGGCGATGGTTCAGGAACAAAACTTCTTGAAATTTTCACGGAGGAATTCGAAGTCGGTAACCGTCTCATCACATTTCAAACCGGAAAATACGGTCGTTTCTCAAATGGAGCTGTTGTTTTGACGATGGAAGATAACAAAATCATTTCGGCGGTTAATACCTCCAGAGATGAAATTGCTCGCAATGATTTCTTGCCTCTCACTGTTGATTATGAAGAGAAGCAATTTGCGCATGGCTCGATTCCTTCTACGTACATGAGAAGAGAAGGTGCTCCTAAGGAACGCGAACTTTTGTGTGCTCGGATCATTGACCGTCCTATTCGACCTCTGTTTCCAACTGGATTTTATCATGAAGTTCAGGTGACGGCTAGTGTTCTTTCCTCAGATGGAACACAAGATCCGATTGTGTATGCGGCTAATGCGACGTCTGCTGCACTTATGTTATCAGATATTCCTTGGGGTGGCCCCATAGGAATGATTCGAATCGGTAGGATTTGTGGGCAGTTTGTGGTGAATCCTACGATGGATGAGCTCAGCTTAAGTGATCTTAACTTGATATATGCCTGTACAAAGGATAAAACTTTGATGATTGATGTCCAAGCTCGTGAGATATCTGAGAAAGATTTGCAAGCTGGATTAAGATTTGCTCATCCGGAGGCAGTAAAGTATATTGAACCTCAAATTAGACTTGCTGCTAAAGCTGGTAAGTCTAAGAAAGAATATAAATTGTCTATGTTGTCTGACAAAACACTGGAGAAAGTCAGTAATTTGGCAGAAGCACCTATTAAAGCTGTTTTCACTGATCCTTCTTATGGAAAGTTTGAACGTGGAAAAGCATTAGACAATATCACACAAGATGTAAAGAAAGTGCTTGAAGAAGAAGGAGATGAAGAAAGCATAAAGGTTTTGTCAAAGACAATAGACACAGTGAGGAAGAAGGTGGTCCGTAAAAGAATTATTGCAGAAGGATCCAGAGTTGATGGAAGACAATTAGATGAAGTAAGACCCTTGTACTGCGAAGCTGGATGCATTTCCAAGCTGCGTGGATCTGCAGATTTTTTCCGTGGCGAAACACAGGTCCTATGTACAGTAACGCTTGGAGCACCTAAAGACGCTCAACACTTGGACTCTTTAGTTGGTCCTTCGTCAAAACGGTTTATGCTTCACTATAGTTTTCCACCCTACTGCATAGGTGAAGTTGGGAAACGTGGTGGTCTAAATAGGCGTGAAGTTGGTCATGGAGCACTTGCTGAAAAAGCTCTTCTTGCTGTTTTGCCTCCTGAAGTTGTTTTTCCATATACTGTTCGTGTTAACTCTGAAGTCATGGCTTCAGACGGTTCAACATCAATGGCAAGTGTATGTGGAGCGAGTATGGCTTTGATGAATGCCGGCATTCCAATAAGGGAACATGTTGCTGGTATTTCTGTGGGTCTTGTTAGTGAACTTGATCCATGCACAGGCGAAATAGCGGACTACCGTATACTGACTGATATTTTGGGCTTGGAAGACCATTTGGGTGACATAGACTTCAAGATTGCTGGAACTCGAAAAGGAGTTACTGCCGCTCAATTGGATATGAAACCAGCTGGAATTCCACTAGATATCATATGTGAATGTTTAGAACCTGCACATAAAGCCCATCTACACATTATTGATCACATGGAACGGGAAATTAAAGAACCATGTACCAAGCAGGGCAGTTCTTCTCAACAAATAGTCACGTTGAAGTACAGCAACGACGCTCTTCGTCGCTTAATTGGGCCAATGGGTGTTCTATTGAAAAAATTGGAAATGGAAACAGGTGCCCGGCTGTCTGTAGGAGATGGAACACTTACAATAGTTACCAAGAATCAATCTGTAATGGATAAAACACTAGAAAAGGTTGTTTCTATAGTGGGCCGTGAAATTGAAGTTGGAGGTATATACAAAGGTGTTGTCACCTCTATAAAAGAATATGGAGCTTTTGTTGAATTTAATGGTGGCAAGCAGGGCCTTCTCCACATTTCGGAGTTATCACATGAACCGGTTTCCAAGATTTCAGACATAGTCTCTATCGGCCAGCAGCTTTCTTTGATGTGCATTGGCCAAGATGTTCATGGTAACATTAAATTATCCCTCAAAGCGGCTTTGCGTGGTCCCGGAGGATCAGAGACTAATTATATAGCTGATGTATCTGCCACATCTGCAAAAGTAACTACCAACAGTTGGGCACCAGTTTGGGACACGTCTAGTATTACACAAGAACAAAATTCTGCTTCCGAGTTGCCTATAGAAAAAAATGAGGTGGGCGAAACAAACCCCTCAGCCTCCCAAACACCAGTAATTGTAATACGCAGTGCTGCAGAATGTGATGAGGAGGAGAAATCTATCAGCTTGGATCACAATCAAACTTCAAATGGTCCTCTCATTGATAATGGGGTAAAATTGGATAGTAAGTTGAAATCTCCGTCCAAGTCAAAACCTCGTAAATCTCAAGATGCAATTGATTCTCCATCTCAGTCAGGTCCCTTGCCAAAGAAGCCAAAACATTCAACGCAAAAAGAGTCGAAATCTGATACTCAAAGGGCAGAAGGGAATGAGAAGAAAGATAAAGACAATGAAACATTGACTGCAAAAGATTTGCCACTTGGAACAAAATTTAAAGCCAAAGTTTTTCAAATTCGTGCACATGGGTTAGTGTTAGATTTGGGTGGAGGAGTTCGAGGAATGTACCGTTTTGAGGGAGATGGGAAAACGGACTTGAAGGTAGGCGATGAGATGCAAGTAGTGCTCTCAAGCTTTTCTAGCAAGGGAATTCCGGTAGTGTTTCCATTGGATGATAAATAA
Protein sequence

>Msa0970920

MSIALRIRNAKPLLRTLHRHISGSRRTFSSGDGDGSGTKLLEIFTEEFEVGNRLITFQTGKYGRFSNGAVVLTMEDNKIISAVNTSRDEIARNDFLPLTVDYEEKQFAHGSIPSTYMRREGAPKERELLCARIIDRPIRPLFPTGFYHEVQVTASVLSSDGTQDPIVYAANATSAALMLSDIPWGGPIGMIRIGRICGQFVVNPTMDELSLSDLNLIYACTKDKTLMIDVQAREISEKDLQAGLRFAHPEAVKYIEPQIRLAAKAGKSKKEYKLSMLSDKTLEKVSNLAEAPIKAVFTDPSYGKFERGKALDNITQDVKKVLEEEGDEESIKVLSKTIDTVRKKVVRKRIIAEGSRVDGRQLDEVRPLYCEAGCISKLRGSADFFRGETQVLCTVTLGAPKDAQHLDSLVGPSSKRFMLHYSFPPYCIGEVGKRGGLNRREVGHGALAEKALLAVLPPEVVFPYTVRVNSEVMASDGSTSMASVCGASMALMNAGIPIREHVAGISVGLVSELDPCTGEIADYRILTDILGLEDHLGDIDFKIAGTRKGVTAAQLDMKPAGIPLDIICECLEPAHKAHLHIIDHMEREIKEPCTKQGSSSQQIVTLKYSNDALRRLIGPMGVLLKKLEMETGARLSVGDGTLTIVTKNQSVMDKTLEKVVSIVGREIEVGGIYKGVVTSIKEYGAFVEFNGGKQGLLHISELSHEPVSKISDIVSIGQQLSLMCIGQDVHGNIKLSLKAALRGPGGSETNYIADVSATSAKVTTNSWAPVWDTSSITQEQNSASELPIEKNEVGETNPSASQTPVIVIRSAAECDEEEKSISLDHNQTSNGPLIDNGVKLDSKLKSPSKSKPRKSQDAIDSPSQSGPLPKKPKHSTQKESKSDTQRAEGNEKKDKDNETLTAKDLPLGTKFKAKVFQIRAHGLVLDLGGGVRGMYRFEGDGKTDLKVGDEMQVVLSSFSSKGIPVVFPLDDK*