AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0799310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0799310 MtrunA17_Chr5g0404291 92.390 657 23 1 1 657 1 630 0.0 1135
Msa0799310 MtrunA17_Chr6g0450161 59.253 589 197 7 70 651 48 600 0.0 681
Msa0799310 MtrunA17_Chr4g0039781 57.877 584 212 4 70 650 54 606 0.0 659
Msa0799310 MtrunA17_Chr4g0026631 27.600 250 154 4 370 615 118 344 3.85e-20 93.6
Msa0799310 MtrunA17_Chr2g0321241 27.027 259 162 5 361 615 114 349 7.81e-19 89.7
Msa0799310 MtrunA17_Chr4g0038101 30.415 217 114 8 414 623 758 944 2.97e-18 89.4
Msa0799310 MtrunA17_Chr3g0127431 36.842 152 89 5 413 559 120 269 8.62e-18 86.3
Msa0799310 MtrunA17_Chr7g0264521 30.806 211 113 8 409 611 510 695 7.36e-17 84.7
Msa0799310 MtrunA17_Chr7g0264521 30.049 203 112 7 414 611 242 419 4.11e-16 82.4
Msa0799310 MtrunA17_Chr8g0387641 29.612 206 116 4 414 614 557 738 8.96e-17 84.7
Msa0799310 MtrunA17_Chr3g0116131 30.622 209 110 7 414 614 939 1120 1.17e-16 84.3
Msa0799310 MtrunA17_Chr1g0192151 30.120 249 123 9 394 599 175 415 1.92e-16 82.0
Msa0799310 MtrunA17_Chr1g0180791 30.332 211 114 8 409 611 509 694 2.12e-16 83.2
Msa0799310 MtrunA17_Chr1g0180791 30.049 203 112 7 414 611 241 418 1.48e-15 80.5
Msa0799310 MtrunA17_Chr4g0014731 30.120 249 123 9 394 599 176 416 2.19e-16 82.0
Msa0799310 MtrunA17_Chr1g0204031 30.000 220 115 7 414 627 594 780 4.29e-16 82.4
Msa0799310 MtrunA17_Chr3g0127401 34.416 154 90 4 413 559 117 266 5.16e-16 80.5
Msa0799310 MtrunA17_Chr2g0289231 30.332 211 116 5 401 608 329 511 6.03e-16 81.6
Msa0799310 MtrunA17_Chr5g0397121 31.553 206 112 6 414 614 549 730 8.42e-16 81.6
Msa0799310 MtrunA17_Chr3g0141901 34.211 152 92 5 414 558 172 322 8.61e-16 80.1
Msa0799310 MtrunA17_Chr2g0327121 29.858 211 115 8 409 611 511 696 1.16e-15 80.9
Msa0799310 MtrunA17_Chr2g0327121 30.244 205 112 8 412 611 242 420 7.63e-14 75.1
Msa0799310 MtrunA17_Chr1g0195741 29.187 209 113 7 414 614 975 1156 1.25e-15 81.3
Msa0799310 MtrunA17_Chr4g0004121 27.143 210 118 5 414 612 277 462 2.02e-15 79.7
Msa0799310 MtrunA17_Chr3g0145011 34.211 152 92 5 414 558 175 325 2.05e-15 79.0
Msa0799310 MtrunA17_Chr1g0195731 29.187 209 113 7 414 614 971 1152 2.44e-15 80.1
Msa0799310 MtrunA17_Chr8g0345461 32.075 159 100 5 414 565 201 358 6.18e-15 77.4
Msa0799310 MtrunA17_Chr7g0262801 33.133 166 96 6 414 568 223 384 6.45e-15 77.8
Msa0799310 MtrunA17_Chr1g0200081 32.075 159 100 5 414 565 211 368 7.67e-15 77.4
Msa0799310 MtrunA17_Chr8g0362771 29.208 202 114 6 416 612 274 451 1.07e-14 77.8
Msa0799310 MtrunA17_Chr1g0182711 32.530 166 97 6 414 568 224 385 1.56e-14 76.3
Msa0799310 MtrunA17_Chr3g0108321 34.459 148 83 6 414 551 195 338 1.60e-14 75.9
Msa0799310 MtrunA17_Chr4g0050561 30.698 215 119 9 416 601 194 407 1.63e-14 76.3
Msa0799310 MtrunA17_Chr6g0462581 29.902 204 111 6 414 611 536 713 2.60e-14 76.6
Msa0799310 MtrunA17_Chr1g0202381 27.536 207 118 5 414 614 505 685 8.24e-14 75.1
Msa0799310 MtrunA17_Chr6g0459561 26.699 206 123 4 412 612 415 597 9.46e-14 74.7
Msa0799310 MtrunA17_Chr3g0135721 30.698 215 113 9 416 621 261 448 1.01e-13 74.7
Msa0799310 MtrunA17_Chr3g0135761 30.698 215 113 10 416 621 259 446 1.12e-13 74.3
Msa0799310 MtrunA17_Chr7g0246111 31.915 141 93 2 414 551 247 387 2.17e-13 73.2
Msa0799310 MtrunA17_Chr8g0357301 28.000 225 117 9 416 623 507 703 5.94e-13 72.4
Msa0799310 MtrunA17_Chr2g0277831 29.808 208 110 8 414 611 278 459 3.50e-12 69.7
Msa0799310 MtrunA17_Chr7g0255721 25.806 217 117 7 408 611 715 900 7.43e-12 68.9
Msa0799310 MtrunA17_Chr7g0255721 27.074 229 126 7 394 611 400 598 4.83e-11 66.2
Msa0799310 MtrunA17_Chr7g0255691 29.268 205 115 8 416 601 55 248 9.64e-12 68.2
Msa0799310 MtrunA17_Chr4g0052271 31.034 145 92 4 413 551 153 295 1.06e-11 67.4
Msa0799310 MtrunA17_Chr2g0316851 30.275 218 112 10 414 619 630 819 1.20e-11 68.6
Msa0799310 MtrunA17_Chr3g0086401 29.577 142 95 4 418 555 425 565 1.50e-11 67.8
Msa0799310 MtrunA17_Chr5g0432631 29.108 213 113 9 416 618 266 450 1.61e-11 67.8
Msa0799310 MtrunA17_Chr1g0202371 26.923 208 117 6 414 614 434 613 2.21e-11 67.0
Msa0799310 MtrunA17_Chr8g0388371 28.235 255 141 9 394 631 419 648 3.94e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0799310 AT2G18330.1 67.319 664 175 7 1 654 1 632 0.0 840
Msa0799310 AT4G36580.1 65.356 661 191 6 1 656 1 628 0.0 783
Msa0799310 AT5G16930.1 57.585 646 222 7 25 650 22 635 0.0 727
Msa0799310 AT3G03060.1 61.028 603 190 8 57 650 57 623 0.0 716
Msa0799310 AT1G50140.3 31.797 217 111 8 414 623 748 934 2.89e-19 93.2
Msa0799310 AT1G50140.1 31.797 217 111 8 414 623 748 934 2.89e-19 93.2
Msa0799310 AT1G50140.4 31.797 217 111 8 414 623 748 934 2.89e-19 93.2
Msa0799310 AT1G50140.2 31.797 217 111 8 414 623 726 912 3.48e-19 92.8
Msa0799310 AT1G50140.5 31.797 217 111 8 414 623 726 912 3.48e-19 92.8
Msa0799310 AT3G19740.1 31.944 216 112 8 414 623 738 924 1.54e-18 90.9
Msa0799310 AT2G27600.1 25.600 250 159 4 370 615 120 346 8.43e-18 87.0
Msa0799310 AT4G04180.2 32.843 204 91 6 416 608 357 525 1.92e-17 86.7
Msa0799310 AT4G04180.1 32.843 204 91 6 416 608 362 530 2.12e-17 86.7
Msa0799310 AT5G03340.1 31.905 210 112 9 409 611 508 693 4.55e-17 85.9
Msa0799310 AT5G03340.1 29.557 203 113 7 414 611 240 417 9.50e-15 78.6
Msa0799310 AT1G80350.1 28.708 209 114 5 414 611 271 455 1.00e-16 84.3
Msa0799310 AT3G53230.1 31.280 211 112 9 409 611 509 694 1.06e-16 84.7
Msa0799310 AT3G53230.1 30.049 203 112 7 414 611 241 418 9.93e-16 81.6
Msa0799310 AT1G64110.5 29.665 209 112 5 414 614 552 733 3.29e-16 83.2
Msa0799310 AT1G64110.3 29.665 209 112 5 414 614 552 733 3.29e-16 83.2
Msa0799310 AT1G64110.2 29.665 209 112 5 414 614 554 735 3.32e-16 83.2
Msa0799310 AT1G64110.4 29.665 209 112 5 414 614 554 735 3.32e-16 83.2
Msa0799310 AT1G64110.1 29.665 209 112 5 414 614 549 730 3.67e-16 83.2
Msa0799310 AT1G02890.1 29.187 209 113 7 414 614 978 1159 3.74e-16 83.2
Msa0799310 AT1G53780.2 33.750 160 96 6 414 565 394 551 5.24e-16 82.0
Msa0799310 AT5G53540.1 35.065 154 89 4 413 559 120 269 5.74e-16 80.9
Msa0799310 AT1G45000.1 34.211 152 92 5 414 558 172 322 5.94e-16 80.9
Msa0799310 AT1G53780.3 33.750 160 96 6 414 565 372 529 6.52e-16 82.0
Msa0799310 AT1G53780.1 33.750 160 96 6 414 565 373 530 6.89e-16 81.6
Msa0799310 AT1G53780.4 33.750 160 96 6 414 565 373 530 6.89e-16 81.6
Msa0799310 AT1G09100.1 30.400 250 121 9 394 599 175 415 7.24e-16 80.9
Msa0799310 AT3G09840.1 30.189 212 114 9 409 611 508 694 7.96e-16 82.0
Msa0799310 AT3G09840.1 29.557 203 113 7 414 611 240 417 1.07e-14 78.2
Msa0799310 AT3G05530.1 29.719 249 124 9 394 599 176 416 1.36e-15 80.1
Msa0799310 AT2G26140.1 31.674 221 115 9 416 627 261 454 1.67e-15 80.9
Msa0799310 AT3G27120.1 24.621 264 159 6 357 612 384 615 2.50e-15 80.1
Msa0799310 AT4G02480.1 28.708 209 114 7 414 614 997 1178 3.11e-15 80.5
Msa0799310 AT5G43010.1 33.553 152 93 5 414 558 172 322 3.76e-15 78.6
Msa0799310 AT4G27680.1 36.774 155 85 7 413 559 117 266 3.84e-15 78.6
Msa0799310 AT4G28000.2 33.974 156 91 4 414 561 553 704 4.11e-15 79.7
Msa0799310 AT4G28000.1 33.974 156 91 4 414 561 551 702 4.25e-15 79.7
Msa0799310 AT4G28000.3 33.974 156 91 4 414 561 553 704 4.30e-15 79.7
Msa0799310 AT4G29040.1 33.129 163 95 5 414 566 221 379 9.14e-15 77.4
Msa0799310 AT1G53750.1 32.075 159 100 5 414 565 201 358 1.22e-14 77.0
Msa0799310 AT5G58290.1 33.133 166 96 7 414 568 188 349 1.45e-14 76.6
Msa0799310 AT5G52882.1 33.333 156 92 4 414 561 550 701 1.52e-14 77.8
Msa0799310 AT2G20140.1 34.177 158 90 5 414 561 221 374 1.93e-14 76.6
Msa0799310 AT5G19990.1 30.698 215 119 9 416 601 196 409 1.97e-14 76.3
Msa0799310 AT5G19990.3 30.698 215 119 9 416 601 196 409 1.97e-14 76.3
Msa0799310 AT5G20000.1 30.698 215 119 9 416 601 196 409 2.35e-14 76.3
Msa0799310 AT4G24860.1 28.502 207 117 6 414 614 854 1035 2.51e-14 77.4
Msa0799310 AT4G24860.3 28.502 207 117 6 414 614 852 1033 2.66e-14 77.4
Msa0799310 AT4G24860.4 28.502 207 117 6 414 614 827 1008 3.03e-14 77.0
Msa0799310 AT4G24860.2 28.502 207 117 6 414 614 850 1031 3.24e-14 77.0
Msa0799310 AT5G19990.2 30.556 216 118 10 416 601 138 351 3.27e-14 75.1
Msa0799310 AT2G34560.1 30.198 202 111 7 413 608 134 311 8.41e-14 73.9
Msa0799310 AT2G34560.2 30.198 202 111 7 413 608 143 320 9.40e-14 73.9
Msa0799310 AT2G45500.4 27.723 202 119 6 414 611 115 293 9.84e-14 73.6
Msa0799310 AT2G45500.3 27.723 202 119 6 414 611 115 293 9.84e-14 73.6
Msa0799310 AT1G79560.1 25.714 280 163 12 359 622 472 722 1.02e-13 75.5
Msa0799310 AT1G79560.2 25.714 280 163 12 359 622 472 722 1.23e-13 75.1
Msa0799310 AT2G45500.2 28.358 201 119 6 414 611 248 426 1.24e-13 74.3
Msa0799310 AT1G79560.3 25.714 280 163 12 359 622 472 722 1.30e-13 75.1
Msa0799310 AT2G45500.1 27.723 202 119 6 414 611 252 430 1.37e-13 73.9
Msa0799310 AT5G53170.1 31.628 215 110 9 416 621 396 582 1.39e-13 74.7
Msa0799310 AT2G45500.5 28.358 201 119 6 414 611 258 436 1.85e-13 73.6
Msa0799310 AT5G64580.1 27.059 255 145 10 373 612 307 535 5.08e-13 73.2
Msa0799310 AT3G02450.1 28.936 235 155 9 398 624 349 579 1.02e-12 71.6
Msa0799310 AT3G56690.1 31.788 151 96 5 414 559 417 565 1.62e-12 71.6
Msa0799310 AT2G03670.1 32.558 172 85 8 416 567 57 217 6.79e-12 68.9
Msa0799310 AT1G05910.1 33.962 159 93 8 414 562 414 570 1.99e-11 68.2
Msa0799310 AT1G02890.2 26.087 207 94 5 414 614 978 1131 2.88e-11 67.4
Msa0799310 AT3G15120.2 31.193 218 110 11 414 619 762 951 5.51e-11 66.6
Msa0799310 AT3G15120.1 31.193 218 110 11 414 619 752 941 5.75e-11 66.6
Msa0799310 AT4G23940.1 30.688 189 115 6 394 567 442 629 9.12e-11 65.9
Msa0799310 AT5G42270.1 28.505 214 116 10 416 618 284 471 9.51e-11 65.5

Find 197 sgRNAs with CRISPR-Local

Find 485 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAAATATCTCGTGAATTT+TGG 0.133415 5_3:+12484950 None:intergenic
CCATCCATGTAGATTCTTAT+TGG 0.154162 5_3:+12483702 None:intergenic
GTGGTATTGGCTTGGGGCCT+GGG 0.192712 5_3:-12488716 Msa0799310:CDS
GGAAGGTGAAGAAGAGAAAA+AGG 0.214032 5_3:+12490421 None:intergenic
GGTGGTATTGGCTTGGGGCC+TGG 0.215284 5_3:-12488717 Msa0799310:CDS
GGAAGTAGGCTTTAATTAAA+TGG 0.217490 5_3:-12483892 Msa0799310:three_prime_UTR
ATCATCAATGGCAAAGTTTC+CGG 0.218092 5_3:-12485897 Msa0799310:CDS
CATTGGAGGCTTTAATTAAA+TGG 0.219914 5_3:-12483913 Msa0799310:three_prime_UTR
TTCTGAAAAGCAATGCATTT+AGG 0.223417 5_3:+12484494 None:intergenic
GCAGCTCTTTCTAACGATTC+AGG 0.254697 5_3:+12490311 None:intergenic
GGATCAAAACCGGACTTATT+AGG 0.258219 5_3:+12490332 None:intergenic
AGCGTCCAAGCTGCTGTCTA+TGG 0.258397 5_3:-12484160 Msa0799310:CDS
TGGCCTGGTGGTATTGGCTT+GGG 0.259130 5_3:-12488723 Msa0799310:CDS
TCTGAAAAGCAATGCATTTA+GGG 0.268029 5_3:+12484495 None:intergenic
TAATTCTCCTCACGCTAAAA+AGG 0.268676 5_3:-12490267 Msa0799310:intron
TTGGGTTGGCCTGGTGGTAT+TGG 0.277724 5_3:-12488729 Msa0799310:CDS
TGGAGGAGATGTTGCACCTC+TGG 0.290956 5_3:-12484988 Msa0799310:CDS
GGGATATATTAATCGGATTC+TGG 0.292072 5_3:-12485942 Msa0799310:CDS
GCAGGATAGGTTGCGTAAAA+TGG 0.292259 5_3:-12489292 Msa0799310:intron
CCTCTGTCAATTGCGTAAAA+AGG 0.294955 5_3:+12488202 None:intergenic
CGCTGCAGCGGCGGTGGCTG+CGG 0.296793 5_3:+12490499 None:intergenic
TACTAAATGCAGGCGGTCTA+AGG 0.335414 5_3:-12486816 Msa0799310:intron
TTGGCCTGGTGGTATTGGCT+TGG 0.347922 5_3:-12488724 Msa0799310:CDS
GCGAGGTTAAACCCTCGGTT+AGG 0.357736 5_3:+12490589 None:intergenic
GTCCGTTGGCGGAGGTGAAT+TGG 0.360727 5_3:+12490400 None:intergenic
CCGATTTGTTATCAGATGAT+TGG 0.361998 5_3:+12490378 None:intergenic
GTTACGATTTGAAGATGAAT+TGG 0.367317 5_3:-12489217 Msa0799310:CDS
TGAAGCCGCTGCAGCGGCGG+TGG 0.370525 5_3:+12490493 None:intergenic
TTTAGCGGCGGACATTGTTT+TGG 0.372118 5_3:+12490538 None:intergenic
GTGATTGAATTCCCACTTCC+AGG 0.372589 5_3:-12484382 Msa0799310:CDS
TTGGACGCTGGCCATGAGTT+TGG 0.375839 5_3:+12484174 None:intergenic
AAGTCTGTTGGGATTCAAAA+TGG 0.381927 5_3:-12485809 Msa0799310:CDS
ACTTTGCCATTGATGATTCC+CGG 0.391919 5_3:+12485903 None:intergenic
TAACATGGGGATATATTAAT+CGG 0.401076 5_3:-12485949 Msa0799310:CDS
GTTGGGATTCAAAATGGTCT+TGG 0.405095 5_3:-12485803 Msa0799310:CDS
TCAACCCACTTGGGTTGGCC+TGG 0.408638 5_3:-12488738 Msa0799310:CDS
CTTAGCTTGAATCTGTTCTT+CGG 0.409283 5_3:+12488308 None:intergenic
GAGGAGAATTATTGATTTCA+CGG 0.411382 5_3:+12490279 None:intergenic
TCATCAATGGCAAAGTTTCC+GGG 0.415540 5_3:-12485896 Msa0799310:CDS
AGATTCGGAGTAAGCGGGAT+TGG 0.419229 5_3:+12490457 None:intergenic
ACATCATCAGCGGTTAAAAC+TGG 0.420416 5_3:-12484074 Msa0799310:CDS
AATTCACGAGATATTTGATT+GGG 0.424190 5_3:-12484946 Msa0799310:CDS
AAAAGAAACTGCTAGAACTA+AGG 0.427392 5_3:-12488250 Msa0799310:CDS
TTTCTCTTTAAGCTCTCTCC+TGG 0.433188 5_3:+12488173 None:intergenic
AAAAGTTGTTACATTTGATC+AGG 0.434557 5_3:+12484030 None:intergenic
CGGGGACAATTCAACCCACT+TGG 0.435013 5_3:-12488748 Msa0799310:CDS
AAATTCACGAGATATTTGAT+TGG 0.443300 5_3:-12484947 Msa0799310:CDS
GCTTTATTAATTACTAGCAT+TGG 0.445402 5_3:-12483930 Msa0799310:three_prime_UTR
CAAAAGACTTCTCTTGCATC+TGG 0.451953 5_3:+12488358 None:intergenic
GGCCTGGTGGTATTGGCTTG+GGG 0.453454 5_3:-12488722 Msa0799310:CDS
ATATATTTGATTTAATAGAC+AGG 0.454169 5_3:+12483787 None:intergenic
TCCTTTAGTAGTCTAACTAC+GGG 0.454293 5_3:-12488767 Msa0799310:intron
TGGGGCAGCCATCATTGATC+CGG 0.455226 5_3:-12485922 Msa0799310:CDS
AGCTATTTCCCTTGCAACCA+TGG 0.456836 5_3:+12485652 None:intergenic
GGATATATTAATCGGATTCT+GGG 0.464287 5_3:-12485941 Msa0799310:CDS
GCGTCCAAGCTGCTGTCTAT+GGG 0.464416 5_3:-12484159 Msa0799310:CDS
TGTTGCACCTCTGGGCCCAC+AGG 0.465792 5_3:-12484979 Msa0799310:CDS
TTCCTTTAGTAGTCTAACTA+CGG 0.467161 5_3:-12488768 Msa0799310:intron
CCAATCATCTGATAACAAAT+CGG 0.468948 5_3:-12490378 Msa0799310:CDS
CGCAGCCACCGCCGCTGCAG+CGG 0.470384 5_3:-12490498 Msa0799310:CDS
TTATCAGATGATTGGTCCGT+TGG 0.472919 5_3:+12490386 None:intergenic
CGTTCCTCCTCTCCTGGAAG+TGG 0.473922 5_3:+12484370 None:intergenic
GTTGTTACATTTGATCAGGC+AGG 0.474235 5_3:+12484034 None:intergenic
ATCAAACACGAAGGCCCATC+AGG 0.475312 5_3:-12485723 Msa0799310:CDS
TTAGGTTCTTCCGCCGGCGG+CGG 0.476994 5_3:+12490350 None:intergenic
TTAAGACGTTCCTCCTCTCC+TGG 0.477110 5_3:+12484364 None:intergenic
TGGGCGTCCTGACTGCGCCT+TGG 0.477986 5_3:-12484140 Msa0799310:CDS
GGAGGAGATGTTGCACCTCT+GGG 0.478550 5_3:-12484987 Msa0799310:CDS
CCATATAGCACGAAAAGAAC+AGG 0.479211 5_3:+12483850 None:intergenic
TAACGATTCAGGATCAAAAC+CGG 0.479681 5_3:+12490322 None:intergenic
GCAGAACCAGAGGCAGGCTC+AGG 0.485076 5_3:-12489241 Msa0799310:CDS
TAGAGAAATTGTTGATTACA+AGG 0.489498 5_3:-12484104 Msa0799310:CDS
TTATTAATTACTAGCATTGG+AGG 0.490000 5_3:-12483927 Msa0799310:three_prime_UTR
TCAGATGATTGGTCCGTTGG+CGG 0.494933 5_3:+12490389 None:intergenic
CGAGGTTAAACCCTCGGTTA+GGG 0.496298 5_3:+12490590 None:intergenic
TGGCAAAGTTTCCGGGATCA+AGG 0.500494 5_3:-12485889 Msa0799310:CDS
CCAATAAGAATCTACATGGA+TGG 0.501536 5_3:-12483702 Msa0799310:three_prime_UTR
TAAATTATAGTACCTTGGCC+AGG 0.502510 5_3:-12485838 Msa0799310:CDS
ATAGACAGCAGCTTGGACGC+TGG 0.503895 5_3:+12484162 None:intergenic
ACGAAAGGAGCAGGCAAGAA+AGG 0.504520 5_3:-12488334 Msa0799310:CDS
AAGGGAAATAGCTAGAAAAT+CGG 0.506778 5_3:-12485642 Msa0799310:intron
ATCAGAAGACGTGCTGAAAG+AGG 0.511170 5_3:-12484236 Msa0799310:CDS
GGCTTTAATTAAATGGAAGT+AGG 0.511469 5_3:-12483906 Msa0799310:three_prime_UTR
AAGAAAGATTCGGAGTAAGC+GGG 0.513304 5_3:+12490452 None:intergenic
GTAACACCTGAGCCTGCCTC+TGG 0.515556 5_3:+12489235 None:intergenic
AATTGTTGATTACAAGGTGG+TGG 0.517550 5_3:-12484098 Msa0799310:CDS
ATTTCTACGCTCTCAAGACC+TGG 0.518217 5_3:+12483818 None:intergenic
TTGGATTATGCAATGATGAC+TGG 0.518345 5_3:-12485008 Msa0799310:CDS
GGAGATTGAAGCCGCTGCAG+CGG 0.525281 5_3:+12490487 None:intergenic
CAATAAGAATCTACATGGAT+GGG 0.525288 5_3:-12483701 Msa0799310:three_prime_UTR
GGAGCTACTGCATTAGCTGC+AGG 0.526485 5_3:-12486751 Msa0799310:CDS
GGCCCCAAGCCAATACCACC+AGG 0.528348 5_3:+12488720 None:intergenic
ACGAAAAGAACAGGTTCTGC+TGG 0.529735 5_3:+12483859 None:intergenic
TAAGGATATTATTGACCGAT+AGG 0.530872 5_3:-12486798 Msa0799310:CDS
TTAGAATCCAAGGCGCAGTC+AGG 0.531612 5_3:+12484133 None:intergenic
ACAATTCAACCCACTTGGGT+TGG 0.532169 5_3:-12488743 Msa0799310:CDS
TTCCAATTCACCTCCGCCAA+CGG 0.532959 5_3:-12490402 Msa0799310:CDS
GTTACGAAACGGTGCCTGAT+GGG 0.535510 5_3:+12485709 None:intergenic
CAGCGGCGGTGGCTGCGGCG+AGG 0.535814 5_3:+12490504 None:intergenic
GGTGGCTGCGGCGAGGCATG+AGG 0.536582 5_3:+12490511 None:intergenic
TCTAAACAACTTAGAATCCA+AGG 0.537151 5_3:+12484123 None:intergenic
GATTGAAGCCGCTGCAGCGG+CGG 0.537340 5_3:+12490490 None:intergenic
CTGGTAAAACCATGGTTGCA+AGG 0.539901 5_3:-12485661 Msa0799310:CDS
ACCCACTTGGGTTGGCCTGG+TGG 0.541309 5_3:-12488735 Msa0799310:CDS
GGGGAAACGGAAGAAAGATT+CGG 0.545817 5_3:+12490442 None:intergenic
ATTGATCCGGGAATCATCAA+TGG 0.548688 5_3:-12485909 Msa0799310:CDS
GAGAAGGTGCAAAAGTAACA+TGG 0.549009 5_3:-12485964 Msa0799310:CDS
ATTGCACTATCAAGATCTCC+TGG 0.549278 5_3:+12484424 None:intergenic
TATGAACTTATTCAGACTCA+AGG 0.552591 5_3:-12490038 Msa0799310:CDS
TGGTAAAACCATGGTTGCAA+GGG 0.552621 5_3:-12485660 Msa0799310:CDS
CACTATTCTTCTCTGCAATG+AGG 0.552659 5_3:+12485763 None:intergenic
CGGTTAAAACTGGCAGCTGA+AGG 0.552692 5_3:-12484064 Msa0799310:CDS
AAATTGCTTATGACTGTTGG+TGG 0.554190 5_3:-12486772 Msa0799310:CDS
AATTCCAATAAGAATCTACA+TGG 0.554214 5_3:-12483706 Msa0799310:three_prime_UTR
CATAAGCAATTTGTCCCTAT+CGG 0.554433 5_3:+12486783 None:intergenic
GCTATATGGAGCAAGAAGCC+AGG 0.555247 5_3:-12483836 Msa0799310:three_prime_UTR
GACAAATTGCTTATGACTGT+TGG 0.555889 5_3:-12486775 Msa0799310:CDS
CAAATCGGATTCACCGCCGC+CGG 0.558661 5_3:-12490363 Msa0799310:CDS
TGATGAAAGTAATGGCTCCA+AGG 0.561353 5_3:-12484308 Msa0799310:CDS
GCGGAAGAACCTAATAAGTC+CGG 0.562387 5_3:-12490341 Msa0799310:CDS
TGTTACGAAACGGTGCCTGA+TGG 0.563042 5_3:+12485708 None:intergenic
GATGATTGGTCCGTTGGCGG+AGG 0.565434 5_3:+12490392 None:intergenic
GGGGCAGCCATCATTGATCC+GGG 0.565807 5_3:-12485921 Msa0799310:CDS
AGAGCTTAAAGAGAAACTGC+AGG 0.566021 5_3:-12488166 Msa0799310:CDS
AATTGACAGAGGAGCAAACC+AGG 0.568575 5_3:-12488191 Msa0799310:CDS
TCGAGGAGGAGCACACTCCC+AGG 0.569529 5_3:+12488699 None:intergenic
GAGGCATGAGGTTAATTTAG+CGG 0.570051 5_3:+12490523 None:intergenic
TGAATTCCCACTTCCAGGAG+AGG 0.571138 5_3:-12484377 Msa0799310:CDS
AAATTATAGTACCTTGGCCA+GGG 0.573385 5_3:-12485837 Msa0799310:CDS
ATCGGATTCACCGCCGCCGG+CGG 0.574610 5_3:-12490360 Msa0799310:CDS
ACAAGAGCAGAACCAGAGGC+AGG 0.574938 5_3:-12489247 Msa0799310:CDS
AAGAATAGTGCATTTAGCAC+GGG 0.575516 5_3:-12485750 Msa0799310:CDS
AGTAGGCTTTAATTAAATGG+AGG 0.578235 5_3:-12483889 Msa0799310:three_prime_UTR
TGAGACATGATCCTTGATCC+CGG 0.580633 5_3:+12485878 None:intergenic
TTGTTACATTTGATCAGGCA+GGG 0.581064 5_3:+12484035 None:intergenic
GATGATTCCCGGATCAATGA+TGG 0.583159 5_3:+12485914 None:intergenic
GACTTATTAGGTTCTTCCGC+CGG 0.585293 5_3:+12490344 None:intergenic
TTATTAGGTTCTTCCGCCGG+CGG 0.586592 5_3:+12490347 None:intergenic
GATGAAAGTAATGGCTCCAA+GGG 0.587048 5_3:-12484307 Msa0799310:CDS
AGAAGGTGCAAAAGTAACAT+GGG 0.587485 5_3:-12485963 Msa0799310:CDS
GGGGACAATTCAACCCACTT+GGG 0.588447 5_3:-12488747 Msa0799310:CDS
GGAAATGGAGGTTCAGAGCA+TGG 0.588594 5_3:+12490565 None:intergenic
ATGGCGCGAGGTTAAACCCT+CGG 0.588829 5_3:+12490584 None:intergenic
ACTGCAAGACTTACTCGCAA+AGG 0.589810 5_3:+12484871 None:intergenic
GAAGAATAGTGCATTTAGCA+CGG 0.591453 5_3:-12485751 Msa0799310:CDS
AAGGCGACATAATGTTGAGT+TGG 0.592330 5_3:-12488382 Msa0799310:CDS
TATCTATGTGATGAAAGTAA+TGG 0.594084 5_3:-12484316 Msa0799310:CDS
GACGCCCATAGACAGCAGCT+TGG 0.595340 5_3:+12484155 None:intergenic
AAGGATATTATTGACCGATA+GGG 0.595741 5_3:-12486797 Msa0799310:CDS
GCTAAAACTTGCTATCTATG+TGG 0.597443 5_3:+12483951 None:intergenic
TCCGCTAAAACCCTAACCGA+GGG 0.598068 5_3:-12490600 Msa0799310:five_prime_UTR
TGTGACTCAGCAACAGAAAG+CGG 0.598417 5_3:-12488280 Msa0799310:CDS
TATATTTGATTTAATAGACA+GGG 0.605568 5_3:+12483788 None:intergenic
GTAACAGCCTGTGGGCCCAG+AGG 0.607222 5_3:+12484972 None:intergenic
ACTATTCTTCTCTGCAATGA+GGG 0.612707 5_3:+12485764 None:intergenic
ATTGGCAAGGAAAAGAATGC+AGG 0.613656 5_3:-12489199 Msa0799310:intron
AGACAGATCATGAAGATCAA+AGG 0.614020 5_3:-12488401 Msa0799310:CDS
GTTCCTCCTCTCCTGGAAGT+GGG 0.614170 5_3:+12484371 None:intergenic
GATATATTAATCGGATTCTG+GGG 0.614964 5_3:-12485940 Msa0799310:CDS
GAGCTTAAAGAGAAACTGCA+GGG 0.615293 5_3:-12488165 Msa0799310:CDS
CCGTGAGATAGCCAAACTCA+TGG 0.617257 5_3:-12484185 Msa0799310:CDS
GTGGCTCATAAAATGCATCT+CGG 0.618782 5_3:+12483970 None:intergenic
TACCACCAGGCCAACCCAAG+TGG 0.619285 5_3:+12488733 None:intergenic
GAAGAAAGATTCGGAGTAAG+CGG 0.621085 5_3:+12490451 None:intergenic
GAGGCTGCCAAGAAAACAGA+GGG 0.621185 5_3:-12484217 Msa0799310:CDS
ATGAAAGTAATGGCTCCAAG+GGG 0.622020 5_3:-12484306 Msa0799310:CDS
TGGGCCAAGAAATCTAAAAG+AGG 0.624957 5_3:-12484927 Msa0799310:CDS
TTAAAACTGGCAGCTGAAGG+CGG 0.625915 5_3:-12484061 Msa0799310:CDS
TGGGAGTGTGCTCCTCCTCG+AGG 0.627689 5_3:-12488697 Msa0799310:intron
GATTTGAAGATGAATTGGCA+AGG 0.629069 5_3:-12489212 Msa0799310:CDS
AGAAATTGTTGATTACAAGG+TGG 0.629900 5_3:-12484101 Msa0799310:CDS
ATTCCCACTTCCAGGAGAGG+AGG 0.632531 5_3:-12484374 Msa0799310:CDS
TAATACAAGAGCAGAACCAG+AGG 0.634859 5_3:-12489251 Msa0799310:CDS
TTCCGCTAAAACCCTAACCG+AGG 0.635470 5_3:-12490601 Msa0799310:five_prime_UTR
GAAAGTAATGGCTCCAAGGG+GGG 0.640631 5_3:-12484304 Msa0799310:CDS
ACCACCAGGCCAACCCAAGT+GGG 0.642479 5_3:+12488734 None:intergenic
TCCTGGGACTGGTAAAACCA+TGG 0.642535 5_3:-12485669 Msa0799310:CDS
CCATGAGTTTGGCTATCTCA+CGG 0.651212 5_3:+12484185 None:intergenic
GTGCTTGCGACAAACAGACC+AGG 0.654798 5_3:-12484442 Msa0799310:CDS
GTTGGCGGAGGTGAATTGGA+AGG 0.655956 5_3:+12490404 None:intergenic
GCATGAGGTTAATTTAGCGG+CGG 0.664313 5_3:+12490526 None:intergenic
GTAAGCGGGATTGGATTGCG+AGG 0.674674 5_3:+12490466 None:intergenic
TAGAACTAAGGAAATTGCAG+AGG 0.681183 5_3:-12488238 Msa0799310:CDS
GAAGGTGCAAAAGTAACATG+GGG 0.683865 5_3:-12485962 Msa0799310:CDS
AGCTTAAAGAGAAACTGCAG+GGG 0.691731 5_3:-12488164 Msa0799310:CDS
GATTATGCAATGATGACTGG+AGG 0.692793 5_3:-12485005 Msa0799310:CDS
GAGGTTCAGAGCATGGCGCG+AGG 0.693110 5_3:+12490572 None:intergenic
CCTTTAGTAGTCTAACTACG+GGG 0.696328 5_3:-12488766 Msa0799310:intron
TGAAAGTAATGGCTCCAAGG+GGG 0.703197 5_3:-12484305 Msa0799310:CDS
TCGAACCTGAGACCTCGAGG+AGG 0.712524 5_3:+12488685 None:intergenic
CTGCAGGAGTATATACGACG+AGG 0.718330 5_3:-12486735 Msa0799310:intron
AGAGGCTGCCAAGAAAACAG+AGG 0.724261 5_3:-12484218 Msa0799310:CDS
AGGTGGTGGAACATCATCAG+CGG 0.727680 5_3:-12484084 Msa0799310:CDS
ACGGGCAACATCAAACACGA+AGG 0.729516 5_3:-12485732 Msa0799310:CDS
GCTTAAAGAGAAACTGCAGG+GGG 0.740481 5_3:-12488163 Msa0799310:CDS
TTACATTTGATCAGGCAGGG+AGG 0.742646 5_3:+12484038 None:intergenic
AGGCTGCCAAGAAAACAGAG+GGG 0.806659 5_3:-12484216 Msa0799310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATGATAACAAAATATA+AGG + chr5_3:12484842-12484861 None:intergenic 10.0%
!! AATTTATGTATATTGAAAAT+AGG + chr5_3:12486353-12486372 None:intergenic 10.0%
!!! ATTATTTTTCAAATTTAAAG+TGG - chr5_3:12486580-12486599 Msa0799310:intron 10.0%
!!! TGTTTTTTAAACATTTTTAT+GGG + chr5_3:12488013-12488032 None:intergenic 10.0%
!!! TTGTTTTTTAAACATTTTTA+TGG + chr5_3:12488014-12488033 None:intergenic 10.0%
!! ATTTAAATATTATTTGCAAA+TGG + chr5_3:12488290-12488309 None:intergenic 10.0%
!!! TTCTAAAATAATATATCTAA+AGG + chr5_3:12488982-12489001 None:intergenic 10.0%
!!! TTTATTAATTTTACTATCAA+TGG + chr5_3:12489060-12489079 None:intergenic 10.0%
!!! TAAAAATTTTACAAAGTTGT+CGG + chr5_3:12484783-12484802 None:intergenic 15.0%
!!! AATTCACTTTTTCAATAAAA+AGG + chr5_3:12485155-12485174 None:intergenic 15.0%
!!! TGTTTCTAAAACAAAATTTA+AGG + chr5_3:12485403-12485422 None:intergenic 15.0%
!! CTTCTTAAAAAAAAAAACTA+CGG - chr5_3:12485674-12485693 Msa0799310:CDS 15.0%
!! TTCTTAAAAAAAAAAACTAC+GGG - chr5_3:12485675-12485694 Msa0799310:CDS 15.0%
!! GAAAAATAATTGAATTGTTA+AGG + chr5_3:12486570-12486589 None:intergenic 15.0%
!! GAAAAATATATCAATAGTAA+TGG + chr5_3:12486680-12486699 None:intergenic 15.0%
!!! GTTTTTTAAACATTTTTATG+GGG + chr5_3:12488012-12488031 None:intergenic 15.0%
!!! AGATATATTATTTTAGAACT+TGG - chr5_3:12488984-12489003 Msa0799310:intron 15.0%
!!! TATATTTGATTTAATAGACA+GGG + chr5_3:12490516-12490535 None:intergenic 15.0%
!!! ATATATTTGATTTAATAGAC+AGG + chr5_3:12490517-12490536 None:intergenic 15.0%
!!! TATTGTTTTGTGATGTATTT+TGG - chr5_3:12484161-12484180 Msa0799310:CDS 20.0%
!! TTGAAACAGAAAAATTAGAA+AGG + chr5_3:12484809-12484828 None:intergenic 20.0%
!!! CATTATAGTTTTAACAATGT+TGG - chr5_3:12485239-12485258 Msa0799310:intron 20.0%
!!! TTCTAAAACAAAATTTAAGG+TGG + chr5_3:12485400-12485419 None:intergenic 20.0%
!! TCTTAAAAAAAAAAACTACG+GGG - chr5_3:12485676-12485695 Msa0799310:CDS 20.0%
!! ACACTTAGTTAAATGATTTA+TGG - chr5_3:12485742-12485761 Msa0799310:CDS 20.0%
!! TAATATGATCTTCATATATG+AGG + chr5_3:12486258-12486277 None:intergenic 20.0%
!! TAAACCCATTAATTATGATT+CGG - chr5_3:12486395-12486414 Msa0799310:intron 20.0%
!! CTGGTAATATTTACTAAAAT+TGG - chr5_3:12486886-12486905 Msa0799310:intron 20.0%
!!! AGTAGTTTATTGATTGAAAA+GGG + chr5_3:12488089-12488108 None:intergenic 20.0%
!!! AAGTAGTTTATTGATTGAAA+AGG + chr5_3:12488090-12488109 None:intergenic 20.0%
!!! AGTTTTAAATTATAGTACCT+TGG - chr5_3:12488458-12488477 Msa0799310:intron 20.0%
!! TAATATGCGATATGAATAAA+TGG - chr5_3:12488847-12488866 Msa0799310:intron 20.0%
!! AGAAAAATTGAAATAGTCAA+AGG + chr5_3:12489265-12489284 None:intergenic 20.0%
!!! ACTATTTCAATTTTTCTGTA+AGG - chr5_3:12489268-12489287 Msa0799310:CDS 20.0%
!!! CTATTTCAATTTTTCTGTAA+GGG - chr5_3:12489269-12489288 Msa0799310:CDS 20.0%
!! GAAAATATTGTAATCCTATT+AGG + chr5_3:12489652-12489671 None:intergenic 20.0%
!!! ATCTTTTATGGTAATTTTCT+GGG + chr5_3:12490043-12490062 None:intergenic 20.0%
!!! AATCTTTTATGGTAATTTTC+TGG + chr5_3:12490044-12490063 None:intergenic 20.0%
!! TAAAAAGAATATGCTTTCAT+GGG + chr5_3:12490303-12490322 None:intergenic 20.0%
!! TTAAAAAGAATATGCTTTCA+TGG + chr5_3:12490304-12490323 None:intergenic 20.0%
! TCAAGCTAAAATTAAAGACT+TGG - chr5_3:12484691-12484710 Msa0799310:intron 25.0%
!! GTATAGTCATGTTTAAAGTT+TGG - chr5_3:12484713-12484732 Msa0799310:intron 25.0%
! AACAAAATATAAGGATAGCT+TGG + chr5_3:12484833-12484852 None:intergenic 25.0%
!!! TCAATTTGTTATTGCACTTA+TGG + chr5_3:12484891-12484910 None:intergenic 25.0%
!! TCATTTCTTTATTGCTCTTT+TGG - chr5_3:12485337-12485356 Msa0799310:intron 25.0%
!! ATTTATCTCCTTTCTTTTCT+TGG - chr5_3:12485471-12485490 Msa0799310:intron 25.0%
! AATGATTAATAGAGACAAAC+CGG + chr5_3:12486287-12486306 None:intergenic 25.0%
! TCATTCTATACTACTAATGA+AGG - chr5_3:12486302-12486321 Msa0799310:intron 25.0%
! CATTCTATACTACTAATGAA+GGG - chr5_3:12486303-12486322 Msa0799310:intron 25.0%
! ATTCTATACTACTAATGAAG+GGG - chr5_3:12486304-12486323 Msa0799310:intron 25.0%
! TAATCCCCATATTTAAATAG+CGG - chr5_3:12486440-12486459 Msa0799310:intron 25.0%
! ATAACCGCTATTTAAATATG+GGG + chr5_3:12486447-12486466 None:intergenic 25.0%
! CATAACCGCTATTTAAATAT+GGG + chr5_3:12486448-12486467 None:intergenic 25.0%
! AAAGTTAGTTCCTTAAACTA+TGG + chr5_3:12486519-12486538 None:intergenic 25.0%
! ATAGTTTAAGGAACTAACTT+TGG - chr5_3:12486518-12486537 Msa0799310:intron 25.0%
! GGATAAATTTGTACAGAAAA+AGG + chr5_3:12486549-12486568 None:intergenic 25.0%
!! ATTTTTCCTATGTGTAAAAG+TGG - chr5_3:12486616-12486635 Msa0799310:intron 25.0%
!!! TAATAACCACTTTTACACAT+AGG + chr5_3:12486625-12486644 None:intergenic 25.0%
! AGTGGTTATTACATAATAAG+AGG - chr5_3:12486634-12486653 Msa0799310:intron 25.0%
! GTGGTTATTACATAATAAGA+GGG - chr5_3:12486635-12486654 Msa0799310:intron 25.0%
! AAGATTTAATCAATACAACC+TGG - chr5_3:12486928-12486947 Msa0799310:intron 25.0%
! AGATTTAATCAATACAACCT+GGG - chr5_3:12486929-12486948 Msa0799310:intron 25.0%
! CCAAAACTCAAAAACAAATA+TGG + chr5_3:12487066-12487085 None:intergenic 25.0%
!!! CCATATTTGTTTTTGAGTTT+TGG - chr5_3:12487063-12487082 Msa0799310:intron 25.0%
! ATATCAGACTACAAATTTGT+TGG - chr5_3:12487255-12487274 Msa0799310:intron 25.0%
!!! AAATGTTGTTTCTATACTAG+AGG - chr5_3:12487281-12487300 Msa0799310:intron 25.0%
! AACATAACAAGTGTAATGTT+TGG + chr5_3:12487694-12487713 None:intergenic 25.0%
! TGAATACTAAGCAAATGTAT+TGG - chr5_3:12487823-12487842 Msa0799310:intron 25.0%
! GAATACTAAGCAAATGTATT+GGG - chr5_3:12487824-12487843 Msa0799310:intron 25.0%
!!! AGTTTATTGATAACGAACTT+GGG + chr5_3:12488220-12488239 None:intergenic 25.0%
!!! TAGTTTATTGATAACGAACT+TGG + chr5_3:12488221-12488240 None:intergenic 25.0%
! TAACATGGGGATATATTAAT+CGG - chr5_3:12488352-12488371 Msa0799310:CDS 25.0%
!! TAAAAAAGCATGTTACGAAA+CGG + chr5_3:12488606-12488625 None:intergenic 25.0%
!!! TTTCGTAACATGCTTTTTTA+TGG - chr5_3:12488606-12488625 Msa0799310:intron 25.0%
!!! TTCGTAACATGCTTTTTTAT+GGG - chr5_3:12488607-12488626 Msa0799310:intron 25.0%
!!! TTACATGTGACTTTTTTTGT+TGG - chr5_3:12488743-12488762 Msa0799310:CDS 25.0%
! GATAAATCAAATCCATTTGT+AGG + chr5_3:12488925-12488944 None:intergenic 25.0%
!! CTAAAGTGAAAAAGTCATTT+TGG - chr5_3:12489012-12489031 Msa0799310:intron 25.0%
! GTCAATGATAAGAAAATCAA+CGG + chr5_3:12489143-12489162 None:intergenic 25.0%
!! TACTTTATTTGCAGAAATTG+AGG - chr5_3:12489220-12489239 Msa0799310:CDS 25.0%
!! ATCAAATATCTCGTGAATTT+TGG + chr5_3:12489354-12489373 None:intergenic 25.0%
! AAATTCACGAGATATTTGAT+TGG - chr5_3:12489354-12489373 Msa0799310:intron 25.0%
! AATTCACGAGATATTTGATT+GGG - chr5_3:12489355-12489374 Msa0799310:intron 25.0%
! CTATTAGGTTTCATATAACA+GGG + chr5_3:12489637-12489656 None:intergenic 25.0%
!!! TGATCATTTTGATTCAATTC+AGG - chr5_3:12489746-12489765 Msa0799310:intron 25.0%
! TATCTATGTGATGAAAGTAA+TGG - chr5_3:12489985-12490004 Msa0799310:intron 25.0%
!! TCTTTTATGGTAATTTTCTG+GGG + chr5_3:12490042-12490061 None:intergenic 25.0%
!! GTCTTCTGATAAATCTTTTA+TGG + chr5_3:12490055-12490074 None:intergenic 25.0%
!! TAGAGAAATTGTTGATTACA+AGG - chr5_3:12490197-12490216 Msa0799310:intron 25.0%
! AAAAGTTGTTACATTTGATC+AGG + chr5_3:12490274-12490293 None:intergenic 25.0%
!! GCTTTATTAATTACTAGCAT+TGG - chr5_3:12490371-12490390 Msa0799310:CDS 25.0%
!! TTATTAATTACTAGCATTGG+AGG - chr5_3:12490374-12490393 Msa0799310:CDS 25.0%
! AATTCCAATAAGAATCTACA+TGG - chr5_3:12490595-12490614 Msa0799310:five_prime_UTR 25.0%
!!! CATTGTTTTGGTATTGGAAA+TGG + chr5_3:12483754-12483773 None:intergenic 30.0%
CCAATCATCTGATAACAAAT+CGG - chr5_3:12483923-12483942 Msa0799310:three_prime_UTR 30.0%
!! GAGGAGAATTATTGATTTCA+CGG + chr5_3:12484025-12484044 None:intergenic 30.0%
!! TAAAAAACCTTTTTAGCGTG+AGG + chr5_3:12484044-12484063 None:intergenic 30.0%
ATAATGCGTGTTTATTGCAT+TGG - chr5_3:12484125-12484144 Msa0799310:CDS 30.0%
!!! GTATTTTGGTGTTGTATTTC+AGG - chr5_3:12484175-12484194 Msa0799310:CDS 30.0%
TATGAACTTATTCAGACTCA+AGG - chr5_3:12484263-12484282 Msa0799310:CDS 30.0%
!!! TTTCAAGTTGTTTTCTAAGC+TGG - chr5_3:12484318-12484337 Msa0799310:CDS 30.0%
! ATCTACTCACATAAGTTTTG+TGG - chr5_3:12484405-12484424 Msa0799310:CDS 30.0%
!! TAAGTTTTGTGGAGAACTTA+TGG - chr5_3:12484416-12484435 Msa0799310:CDS 30.0%
!! TGTTTCTGTATTTGCTATCT+TGG + chr5_3:12484498-12484517 None:intergenic 30.0%
! TAAGTTTTGCTTATCCAAAC+AGG - chr5_3:12484569-12484588 Msa0799310:intron 30.0%
! AAGTTTTGCTTATCCAAACA+GGG - chr5_3:12484570-12484589 Msa0799310:intron 30.0%
AAAGTTTGGTCAGAATTCAA+CGG - chr5_3:12484727-12484746 Msa0799310:intron 30.0%
TGACAATGATCAGATGATAT+TGG - chr5_3:12484908-12484927 Msa0799310:CDS 30.0%
ATCCTGCAATGAAATAGATT+TGG + chr5_3:12484996-12485015 None:intergenic 30.0%
AATCTATTTCATTGCAGGAT+AGG - chr5_3:12484996-12485015 Msa0799310:CDS 30.0%
GTTACGATTTGAAGATGAAT+TGG - chr5_3:12485084-12485103 Msa0799310:intron 30.0%
TATGAACTTAGATAATCCCA+TGG - chr5_3:12485430-12485449 Msa0799310:intron 30.0%
TTTGAAAGCCAAGAAAAGAA+AGG + chr5_3:12485482-12485501 None:intergenic 30.0%
TTCCTTTAGTAGTCTAACTA+CGG - chr5_3:12485533-12485552 Msa0799310:intron 30.0%
CTAAACTAACCCACTTAAAT+TGG + chr5_3:12485654-12485673 None:intergenic 30.0%
TTCATAGAGTAATCTAACTG+TGG - chr5_3:12485772-12485791 Msa0799310:CDS 30.0%
TCATAGAGTAATCTAACTGT+GGG - chr5_3:12485773-12485792 Msa0799310:CDS 30.0%
!! AGAGAAGCTTAATTTGCATA+AGG + chr5_3:12485820-12485839 None:intergenic 30.0%
CAAATGGAAAATTGTGGATA+AGG + chr5_3:12485879-12485898 None:intergenic 30.0%
AAAAGAAACTGCTAGAACTA+AGG - chr5_3:12486051-12486070 Msa0799310:intron 30.0%
!!! GCTACTTTTAGTCATATTGA+AGG - chr5_3:12486190-12486209 Msa0799310:intron 30.0%
!! CAAAGGATGTTTTTATCAGT+TGG + chr5_3:12486220-12486239 None:intergenic 30.0%
CAACTGATAAAAACATCCTT+TGG - chr5_3:12486218-12486237 Msa0799310:intron 30.0%
GAAGATCATATTATGTGTAC+CGG - chr5_3:12486265-12486284 Msa0799310:intron 30.0%
TTCTATACTACTAATGAAGG+GGG - chr5_3:12486305-12486324 Msa0799310:intron 30.0%
GCAACCGAATCATAATTAAT+GGG + chr5_3:12486402-12486421 None:intergenic 30.0%
AGCAACCGAATCATAATTAA+TGG + chr5_3:12486403-12486422 None:intergenic 30.0%
CCATAACCGCTATTTAAATA+TGG + chr5_3:12486449-12486468 None:intergenic 30.0%
CCATATTTAAATAGCGGTTA+TGG - chr5_3:12486446-12486465 Msa0799310:intron 30.0%
ATATCACGTACCATAGTTTA+AGG - chr5_3:12486506-12486525 Msa0799310:intron 30.0%
TTTAAGGAACTAACTTTGGT+CGG - chr5_3:12486522-12486541 Msa0799310:intron 30.0%
AGGGAATGCTATTAACTTAT+TGG - chr5_3:12486654-12486673 Msa0799310:intron 30.0%
TTGTGTATGTGGATATTACT+TGG + chr5_3:12486702-12486721 None:intergenic 30.0%
TGCATATCTTCTGTTTGTAT+AGG - chr5_3:12486853-12486872 Msa0799310:intron 30.0%
GCATATCTTCTGTTTGTATA+GGG - chr5_3:12486854-12486873 Msa0799310:intron 30.0%
TTCATGATTGTTTGACTAGT+AGG - chr5_3:12486997-12487016 Msa0799310:intron 30.0%
AAACAAATATGGTTCGTAAG+TGG + chr5_3:12487055-12487074 None:intergenic 30.0%
TTGCAAGGTTAAAATGTTGT+TGG - chr5_3:12487124-12487143 Msa0799310:intron 30.0%
! AAAATAGTTGATACACAACG+AGG + chr5_3:12487191-12487210 None:intergenic 30.0%
CACATATCGCATAAAAACAA+CGG + chr5_3:12487360-12487379 None:intergenic 30.0%
TTTAGTACAGTGTTGTCAAA+TGG - chr5_3:12487381-12487400 Msa0799310:intron 30.0%
TAAGGATATTATTGACCGAT+AGG - chr5_3:12487503-12487522 Msa0799310:intron 30.0%
AAGGATATTATTGACCGATA+GGG - chr5_3:12487504-12487523 Msa0799310:intron 30.0%
TCAAAATGAAATGCACTAAG+AGG + chr5_3:12487608-12487627 None:intergenic 30.0%
! AGTGCATTTCATTTTGAACT+TGG - chr5_3:12487611-12487630 Msa0799310:intron 30.0%
CTACTACAAAAGACATTCAA+TGG + chr5_3:12487744-12487763 None:intergenic 30.0%
! TGAATGTCTTTTGTAGTAGT+TGG - chr5_3:12487745-12487764 Msa0799310:intron 30.0%
! GATACAACTATTTTGCAATC+AGG + chr5_3:12487771-12487790 None:intergenic 30.0%
AGTAACATTCACAATGTCTA+TGG - chr5_3:12487854-12487873 Msa0799310:intron 30.0%
CTTACTTAAACTCCTTGATT+CGG + chr5_3:12487892-12487911 None:intergenic 30.0%
! TAAACATTTTTATGGGGTCT+AGG + chr5_3:12488006-12488025 None:intergenic 30.0%
! AGTTTATTGATTGAAAAGGG+AGG + chr5_3:12488086-12488105 None:intergenic 30.0%
GGATATATTAATCGGATTCT+GGG - chr5_3:12488360-12488379 Msa0799310:CDS 30.0%
GATATATTAATCGGATTCTG+GGG - chr5_3:12488361-12488380 Msa0799310:CDS 30.0%
AAGGGAAATAGCTAGAAAAT+CGG - chr5_3:12488659-12488678 Msa0799310:intron 30.0%
TATTCATATCGCATATTACC+AGG + chr5_3:12488845-12488864 None:intergenic 30.0%
ATATATCTAAAGGAAGTCCA+TGG + chr5_3:12488972-12488991 None:intergenic 30.0%
!! AAGTGAAAAAGTCATTTTGG+AGG - chr5_3:12489015-12489034 Msa0799310:intron 30.0%
ATTTAGTGCCTCACTTTAAA+GGG + chr5_3:12489178-12489197 None:intergenic 30.0%
! TCAATTTTTCTGTAAGGGTT+TGG - chr5_3:12489274-12489293 Msa0799310:CDS 30.0%
! AGCGCTGCTTTAATATTATT+TGG - chr5_3:12489501-12489520 Msa0799310:intron 30.0%
TTCTCACATTTAGATCAACT+TGG + chr5_3:12489528-12489547 None:intergenic 30.0%
TAAAATTGTAGACGTCTACA+TGG - chr5_3:12489557-12489576 Msa0799310:intron 30.0%
CCTATTAGGTTTCATATAAC+AGG + chr5_3:12489638-12489657 None:intergenic 30.0%
CCTGTTATATGAAACCTAAT+AGG - chr5_3:12489635-12489654 Msa0799310:intron 30.0%
TCTGAAAAGCAATGCATTTA+GGG + chr5_3:12489809-12489828 None:intergenic 30.0%
! TTCTGAAAAGCAATGCATTT+AGG + chr5_3:12489810-12489829 None:intergenic 30.0%
TCTAAACAACTTAGAATCCA+AGG + chr5_3:12490181-12490200 None:intergenic 30.0%
! AGAAATTGTTGATTACAAGG+TGG - chr5_3:12490200-12490219 Msa0799310:intron 30.0%
! CAAATGTAACAACTTTTACG+TGG - chr5_3:12490277-12490296 Msa0799310:CDS 30.0%
! CATTGGAGGCTTTAATTAAA+TGG - chr5_3:12490388-12490407 Msa0799310:CDS 30.0%
! GGCTTTAATTAAATGGAAGT+AGG - chr5_3:12490395-12490414 Msa0799310:CDS 30.0%
! GGAAGTAGGCTTTAATTAAA+TGG - chr5_3:12490409-12490428 Msa0799310:CDS 30.0%
! AGTAGGCTTTAATTAAATGG+AGG - chr5_3:12490412-12490431 Msa0799310:CDS 30.0%
CAATAAGAATCTACATGGAT+GGG - chr5_3:12490600-12490619 Msa0799310:five_prime_UTR 30.0%
!!! TGTTTTGGTATTGGAAATGG+AGG + chr5_3:12483751-12483770 None:intergenic 35.0%
AAGAAGAGAAAAAGGGGAAA+CGG + chr5_3:12483875-12483894 None:intergenic 35.0%
AAGGTGAAGAAGAGAAAAAG+GGG + chr5_3:12483881-12483900 None:intergenic 35.0%
GAAGGTGAAGAAGAGAAAAA+GGG + chr5_3:12483882-12483901 None:intergenic 35.0%
!! CCGATTTGTTATCAGATGAT+TGG + chr5_3:12483926-12483945 None:intergenic 35.0%
TAACGATTCAGGATCAAAAC+CGG + chr5_3:12483982-12484001 None:intergenic 35.0%
TAATTCTCCTCACGCTAAAA+AGG - chr5_3:12484034-12484053 Msa0799310:exon 35.0%
CGTGTTTATTGCATTGGAAA+TGG - chr5_3:12484131-12484150 Msa0799310:CDS 35.0%
TTCAACGGAAAACTAGCAAA+TGG - chr5_3:12484742-12484761 Msa0799310:intron 35.0%
TCAACGGAAAACTAGCAAAT+GGG - chr5_3:12484743-12484762 Msa0799310:intron 35.0%
TGCCAAATCTATTTCATTGC+AGG - chr5_3:12484991-12485010 Msa0799310:CDS 35.0%
GATTTGAAGATGAATTGGCA+AGG - chr5_3:12485089-12485108 Msa0799310:intron 35.0%
TTAGAGACATTGTTCTTCCA+TGG - chr5_3:12485208-12485227 Msa0799310:intron 35.0%
ACTATAATGACTTCTTGCCA+TGG + chr5_3:12485228-12485247 None:intergenic 35.0%
CTGAGCTTGATCTTATCATA+TGG - chr5_3:12485298-12485317 Msa0799310:intron 35.0%
TCCTTTAGTAGTCTAACTAC+GGG - chr5_3:12485534-12485553 Msa0799310:intron 35.0%
GAAGAAAGTGGATAGATTTC+AGG + chr5_3:12485708-12485727 None:intergenic 35.0%
AATCTATCCACTTTCTTCTC+TGG - chr5_3:12485710-12485729 Msa0799310:CDS 35.0%
ATCTATCCACTTTCTTCTCT+GGG - chr5_3:12485711-12485730 Msa0799310:CDS 35.0%
TGTCTGCAAATGGAAAATTG+TGG + chr5_3:12485885-12485904 None:intergenic 35.0%
AGACAGATCATGAAGATCAA+AGG - chr5_3:12485900-12485919 Msa0799310:CDS 35.0%
! AGAGAAGTCTTTTGTACGAA+AGG - chr5_3:12485952-12485971 Msa0799310:CDS 35.0%
! CTTAGCTTGAATCTGTTCTT+CGG + chr5_3:12485996-12486015 None:intergenic 35.0%
TAGAACTAAGGAAATTGCAG+AGG - chr5_3:12486063-12486082 Msa0799310:intron 35.0%
GGCAAAAATAGTTTCTCCAA+AGG + chr5_3:12486237-12486256 None:intergenic 35.0%
AATAGCGGTTATGGAATGAA+TGG - chr5_3:12486455-12486474 Msa0799310:intron 35.0%
ACAGTCTATTCTTGTGTATG+TGG + chr5_3:12486713-12486732 None:intergenic 35.0%
GTTGATATAATTTCCAGCGA+TGG + chr5_3:12486824-12486843 None:intergenic 35.0%
AAAAGCAAGCTTATAAACCC+AGG + chr5_3:12486949-12486968 None:intergenic 35.0%
! TTTTCACTGAGAGTAGATGA+CGG - chr5_3:12487207-12487226 Msa0799310:intron 35.0%
! CAGTTTGTTCAAATTCTGCT+AGG + chr5_3:12487435-12487454 None:intergenic 35.0%
CATAAGCAATTTGTCCCTAT+CGG + chr5_3:12487521-12487540 None:intergenic 35.0%
GACAAATTGCTTATGACTGT+TGG - chr5_3:12487526-12487545 Msa0799310:intron 35.0%
AAATTGCTTATGACTGTTGG+TGG - chr5_3:12487529-12487548 Msa0799310:intron 35.0%
! GTATCTAGAATGCGTAATAG+CGG - chr5_3:12487786-12487805 Msa0799310:intron 35.0%
! AATGCGTAATAGCGGTTTTA+TGG - chr5_3:12487794-12487813 Msa0799310:intron 35.0%
CGAATCAAGGAGTTTAAGTA+AGG - chr5_3:12487890-12487909 Msa0799310:intron 35.0%
!! TTGATAATGGGCATGGAAAT+TGG + chr5_3:12487973-12487992 None:intergenic 35.0%
!! GGAATGAAAGGGTTGATAAT+GGG + chr5_3:12487985-12488004 None:intergenic 35.0%
!! AGGAATGAAAGGGTTGATAA+TGG + chr5_3:12487986-12488005 None:intergenic 35.0%
! TTATTGATTGAAAAGGGAGG+AGG + chr5_3:12488083-12488102 None:intergenic 35.0%
!! TATTGATAACGAACTTGGGT+TGG + chr5_3:12488216-12488235 None:intergenic 35.0%
ACTTTCTATTTCCACAGAGA+AGG - chr5_3:12488321-12488340 Msa0799310:CDS 35.0%
! AGAAGGTGCAAAAGTAACAT+GGG - chr5_3:12488338-12488357 Msa0799310:CDS 35.0%
GGGATATATTAATCGGATTC+TGG - chr5_3:12488359-12488378 Msa0799310:CDS 35.0%
ATCATCAATGGCAAAGTTTC+CGG - chr5_3:12488404-12488423 Msa0799310:intron 35.0%
TAAATTATAGTACCTTGGCC+AGG - chr5_3:12488463-12488482 Msa0799310:intron 35.0%
AAATTATAGTACCTTGGCCA+GGG - chr5_3:12488464-12488483 Msa0799310:intron 35.0%
AAGTCTGTTGGGATTCAAAA+TGG - chr5_3:12488492-12488511 Msa0799310:intron 35.0%
ACTATTCTTCTCTGCAATGA+GGG + chr5_3:12488540-12488559 None:intergenic 35.0%
GAAGAATAGTGCATTTAGCA+CGG - chr5_3:12488550-12488569 Msa0799310:intron 35.0%
AAGAATAGTGCATTTAGCAC+GGG - chr5_3:12488551-12488570 Msa0799310:intron 35.0%
! CTCACTTTAAAGGGAAAAGT+GGG + chr5_3:12489169-12489188 None:intergenic 35.0%
GATTTAGTGCCTCACTTTAA+AGG + chr5_3:12489179-12489198 None:intergenic 35.0%
! ACTGATAGTGAAACGTGATA+TGG + chr5_3:12489201-12489220 None:intergenic 35.0%
TTGGATTATGCAATGATGAC+TGG - chr5_3:12489293-12489312 Msa0799310:intron 35.0%
TCCTTATCTGTAGTAACAAG+TGG - chr5_3:12489672-12489691 Msa0799310:intron 35.0%
!! AATGCATTGCTTTTCAGAAC+TGG - chr5_3:12489811-12489830 Msa0799310:intron 35.0%
! AATTGTTGATTACAAGGTGG+TGG - chr5_3:12490203-12490222 Msa0799310:intron 35.0%
TTGTTACATTTGATCAGGCA+GGG + chr5_3:12490269-12490288 None:intergenic 35.0%
!! GCTAAAACTTGCTATCTATG+TGG + chr5_3:12490353-12490372 None:intergenic 35.0%
CCATCCATGTAGATTCTTAT+TGG + chr5_3:12490602-12490621 None:intergenic 35.0%
CCAATAAGAATCTACATGGA+TGG - chr5_3:12490599-12490618 Msa0799310:five_prime_UTR 35.0%
GAGGCATGAGGTTAATTTAG+CGG + chr5_3:12483781-12483800 None:intergenic 40.0%
AAGAAAGATTCGGAGTAAGC+GGG + chr5_3:12483852-12483871 None:intergenic 40.0%
GAAGAAAGATTCGGAGTAAG+CGG + chr5_3:12483853-12483872 None:intergenic 40.0%
GGAAGGTGAAGAAGAGAAAA+AGG + chr5_3:12483883-12483902 None:intergenic 40.0%
! TTATCAGATGATTGGTCCGT+TGG + chr5_3:12483918-12483937 None:intergenic 40.0%
GGATCAAAACCGGACTTATT+AGG + chr5_3:12483972-12483991 None:intergenic 40.0%
!! TTTTCTAAGCTGGTGACGAT+AGG - chr5_3:12484328-12484347 Msa0799310:CDS 40.0%
TAGGTTGCTCGTGAATTGTT+TGG - chr5_3:12484347-12484366 Msa0799310:CDS 40.0%
AGGTTGCTCGTGAATTGTTT+GGG - chr5_3:12484348-12484367 Msa0799310:CDS 40.0%
CAACGGAAAACTAGCAAATG+GGG - chr5_3:12484744-12484763 Msa0799310:intron 40.0%
TTATTGCACTTATGGCCTAG+GGG + chr5_3:12484883-12484902 None:intergenic 40.0%
GTTATTGCACTTATGGCCTA+GGG + chr5_3:12484884-12484903 None:intergenic 40.0%
TGTTATTGCACTTATGGCCT+AGG + chr5_3:12484885-12484904 None:intergenic 40.0%
TAATACAAGAGCAGAACCAG+AGG - chr5_3:12485050-12485069 Msa0799310:intron 40.0%
ATTGGCAAGGAAAAGAATGC+AGG - chr5_3:12485102-12485121 Msa0799310:intron 40.0%
CAGCAATTGTCAAGAACCAT+GGG + chr5_3:12485449-12485468 None:intergenic 40.0%
TCAGCAATTGTCAAGAACCA+TGG + chr5_3:12485450-12485469 None:intergenic 40.0%
CCTTTAGTAGTCTAACTACG+GGG - chr5_3:12485535-12485554 Msa0799310:intron 40.0%
!! TCTTCGGTGCCAATTTAAGT+GGG - chr5_3:12485642-12485661 Msa0799310:intron 40.0%
CTTCATGATCTGTCTGCAAA+TGG + chr5_3:12485895-12485914 None:intergenic 40.0%
AAGGCGACATAATGTTGAGT+TGG - chr5_3:12485919-12485938 Msa0799310:CDS 40.0%
CAAAAGACTTCTCTTGCATC+TGG + chr5_3:12485946-12485965 None:intergenic 40.0%
CCTCTGTCAATTGCGTAAAA+AGG + chr5_3:12486102-12486121 None:intergenic 40.0%
! CCTTTTTACGCAATTGACAG+AGG - chr5_3:12486099-12486118 Msa0799310:intron 40.0%
TTTCTCTTTAAGCTCTCTCC+TGG + chr5_3:12486131-12486150 None:intergenic 40.0%
AGAGCTTAAAGAGAAACTGC+AGG - chr5_3:12486135-12486154 Msa0799310:intron 40.0%
GAGCTTAAAGAGAAACTGCA+GGG - chr5_3:12486136-12486155 Msa0799310:intron 40.0%
AGCTTAAAGAGAAACTGCAG+GGG - chr5_3:12486137-12486156 Msa0799310:intron 40.0%
! AGGGGGATACATAGTTCTTT+TGG - chr5_3:12486322-12486341 Msa0799310:intron 40.0%
TATGTAGACGCAAACATGGA+AGG + chr5_3:12486779-12486798 None:intergenic 40.0%
CAGATATGTAGACGCAAACA+TGG + chr5_3:12486783-12486802 None:intergenic 40.0%
CATGTTTGCGTCTACATATC+TGG - chr5_3:12486781-12486800 Msa0799310:CDS 40.0%
TCTTCTGTAATTTCCATCGC+TGG - chr5_3:12486808-12486827 Msa0799310:intron 40.0%
TTGTATAGGGAAAGTCTTGC+TGG - chr5_3:12486867-12486886 Msa0799310:intron 40.0%
TGTTTGACTAGTAGGACTTG+TGG - chr5_3:12487005-12487024 Msa0799310:intron 40.0%
TAGTAGGACTTGTGGTTGAT+TGG - chr5_3:12487013-12487032 Msa0799310:intron 40.0%
ATATGGTTCGTAAGTGGCAT+GGG + chr5_3:12487049-12487068 None:intergenic 40.0%
AATATGGTTCGTAAGTGGCA+TGG + chr5_3:12487050-12487069 None:intergenic 40.0%
! TTTGGTTTCTTTCGTTGCCT+AGG - chr5_3:12487081-12487100 Msa0799310:intron 40.0%
CTAGTTGTTACATGCTTGCA+AGG - chr5_3:12487109-12487128 Msa0799310:intron 40.0%
AGTACAGTGTTGTCAAATGG+TGG - chr5_3:12487384-12487403 Msa0799310:intron 40.0%
GTTCAAATTCTGCTAGGCTA+CGG + chr5_3:12487429-12487448 None:intergenic 40.0%
CACTGAGTTTGAAAGTCTGT+TGG - chr5_3:12487643-12487662 Msa0799310:intron 40.0%
CAAGTGTAATGTTTGGCAGA+AGG + chr5_3:12487687-12487706 None:intergenic 40.0%
TCTATGTTACGCCACAGAAA+AGG - chr5_3:12487929-12487948 Msa0799310:intron 40.0%
TATGGGGTCTAGGAATGAAA+GGG + chr5_3:12487996-12488015 None:intergenic 40.0%
TTATGGGGTCTAGGAATGAA+AGG + chr5_3:12487997-12488016 None:intergenic 40.0%
! ATTCTCACCGGTGTCAATTT+AGG + chr5_3:12488142-12488161 None:intergenic 40.0%
!! TTACTTTTGCACCTTCTCTG+TGG + chr5_3:12488335-12488354 None:intergenic 40.0%
! GAGAAGGTGCAAAAGTAACA+TGG - chr5_3:12488337-12488356 Msa0799310:CDS 40.0%
! GAAGGTGCAAAAGTAACATG+GGG - chr5_3:12488339-12488358 Msa0799310:CDS 40.0%
ATTGATCCGGGAATCATCAA+TGG - chr5_3:12488392-12488411 Msa0799310:CDS 40.0%
! ACTTTGCCATTGATGATTCC+CGG + chr5_3:12488401-12488420 None:intergenic 40.0%
TCATCAATGGCAAAGTTTCC+GGG - chr5_3:12488405-12488424 Msa0799310:intron 40.0%
CCAGGGAAAAAAAGTCTGTT+GGG - chr5_3:12488481-12488500 Msa0799310:intron 40.0%
GTTGGGATTCAAAATGGTCT+TGG - chr5_3:12488498-12488517 Msa0799310:intron 40.0%
CACTATTCTTCTCTGCAATG+AGG + chr5_3:12488541-12488560 None:intergenic 40.0%
TGGTAAAACCATGGTTGCAA+GGG - chr5_3:12488641-12488660 Msa0799310:intron 40.0%
! TTGAGTTTGTACCGACAAGT+TGG - chr5_3:12488811-12488830 Msa0799310:intron 40.0%
AGGAATTCATGCCAACTTGT+CGG + chr5_3:12488825-12488844 None:intergenic 40.0%
!! CTGTTTCTGCTATTAAGCCA+TGG - chr5_3:12488952-12488971 Msa0799310:intron 40.0%
! CCTCACTTTAAAGGGAAAAG+TGG + chr5_3:12489170-12489189 None:intergenic 40.0%
!!! CCACTTTTCCCTTTAAAGTG+AGG - chr5_3:12489167-12489186 Msa0799310:intron 40.0%
GATTATGCAATGATGACTGG+AGG - chr5_3:12489296-12489315 Msa0799310:intron 40.0%
!! GAATTTTGGTAACAGCCTGT+GGG + chr5_3:12489340-12489359 None:intergenic 40.0%
!! TGAATTTTGGTAACAGCCTG+TGG + chr5_3:12489341-12489360 None:intergenic 40.0%
TGGGCCAAGAAATCTAAAAG+AGG - chr5_3:12489374-12489393 Msa0799310:intron 40.0%
! CAGGCCTCTTTTAGATTTCT+TGG + chr5_3:12489381-12489400 None:intergenic 40.0%
CCTCGTCAATAAAAAGCAAC+AGG + chr5_3:12489400-12489419 None:intergenic 40.0%
!!! CCTGTTGCTTTTTATTGACG+AGG - chr5_3:12489397-12489416 Msa0799310:intron 40.0%
ATATTAAAGCAGCGCTACTC+AGG + chr5_3:12489497-12489516 None:intergenic 40.0%
! GCCACTTGTTACTACAGATA+AGG + chr5_3:12489676-12489695 None:intergenic 40.0%
ATTGCACTATCAAGATCTCC+TGG + chr5_3:12489880-12489899 None:intergenic 40.0%
TGATGAAAGTAATGGCTCCA+AGG - chr5_3:12489993-12490012 Msa0799310:intron 40.0%
GATGAAAGTAATGGCTCCAA+GGG - chr5_3:12489994-12490013 Msa0799310:intron 40.0%
ATGAAAGTAATGGCTCCAAG+GGG - chr5_3:12489995-12490014 Msa0799310:intron 40.0%
CTTCATAAATAATCCCCCCT+TGG + chr5_3:12490013-12490032 None:intergenic 40.0%
! AGAAAACCCCTCTGTTTTCT+TGG + chr5_3:12490094-12490113 None:intergenic 40.0%
! AAGAAAACAGAGGGGTTTTC+TGG - chr5_3:12490093-12490112 Msa0799310:CDS 40.0%
ACATCATCAGCGGTTAAAAC+TGG - chr5_3:12490227-12490246 Msa0799310:intron 40.0%
GTTGTTACATTTGATCAGGC+AGG + chr5_3:12490270-12490289 None:intergenic 40.0%
GTGGCTCATAAAATGCATCT+CGG + chr5_3:12490334-12490353 None:intergenic 40.0%
CCATATAGCACGAAAAGAAC+AGG + chr5_3:12490454-12490473 None:intergenic 40.0%
! CCTGTTCTTTTCGTGCTATA+TGG - chr5_3:12490451-12490470 Msa0799310:CDS 40.0%
!!! GGCGGACATTGTTTTGGTAT+TGG + chr5_3:12483760-12483779 None:intergenic 45.0%
! TTTAGCGGCGGACATTGTTT+TGG + chr5_3:12483766-12483785 None:intergenic 45.0%
GCATGAGGTTAATTTAGCGG+CGG + chr5_3:12483778-12483797 None:intergenic 45.0%
GGGGAAACGGAAGAAAGATT+CGG + chr5_3:12483862-12483881 None:intergenic 45.0%
GACTTATTAGGTTCTTCCGC+CGG + chr5_3:12483960-12483979 None:intergenic 45.0%
GCGGAAGAACCTAATAAGTC+CGG - chr5_3:12483960-12483979 Msa0799310:three_prime_UTR 45.0%
GCAGCTCTTTCTAACGATTC+AGG + chr5_3:12483993-12484012 None:intergenic 45.0%
GAAGTGACTATGACCCTGTT+TGG + chr5_3:12484586-12484605 None:intergenic 45.0%
TATTGCACTTATGGCCTAGG+GGG + chr5_3:12484882-12484901 None:intergenic 45.0%
GCAGGATAGGTTGCGTAAAA+TGG - chr5_3:12485009-12485028 Msa0799310:CDS 45.0%
AAGGAAAAGAATGCAGGTGC+AGG - chr5_3:12485108-12485127 Msa0799310:intron 45.0%
CCCCGTAGTTAGACTACTAA+AGG + chr5_3:12485538-12485557 None:intergenic 45.0%
ACAATTCAACCCACTTGGGT+TGG - chr5_3:12485558-12485577 Msa0799310:intron 45.0%
GTCTCAGGTTCGATTCTCTT+CGG - chr5_3:12485626-12485645 Msa0799310:intron 45.0%
!! CTCTTCGGTGCCAATTTAAG+TGG - chr5_3:12485641-12485660 Msa0799310:intron 45.0%
TGAACACCCAGAGAAGAAAG+TGG + chr5_3:12485720-12485739 None:intergenic 45.0%
! GTCTTTTGTACGAAAGGAGC+AGG - chr5_3:12485958-12485977 Msa0799310:CDS 45.0%
TGTGACTCAGCAACAGAAAG+CGG - chr5_3:12486021-12486040 Msa0799310:intron 45.0%
AATTGACAGAGGAGCAAACC+AGG - chr5_3:12486110-12486129 Msa0799310:intron 45.0%
GCTTAAAGAGAAACTGCAGG+GGG - chr5_3:12486138-12486157 Msa0799310:intron 45.0%
TGCAGGGGGAAAGAGATAAA+TGG - chr5_3:12486152-12486171 Msa0799310:intron 45.0%
!!! GTGAGTGGTGTCATGAGTTT+TGG + chr5_3:12486754-12486773 None:intergenic 45.0%
TGTAACAACTAGCAACGCCT+AGG + chr5_3:12487101-12487120 None:intergenic 45.0%
! CGGCTGCTTGCACTTTTATT+TGG - chr5_3:12487227-12487246 Msa0799310:intron 45.0%
TACTAAATGCAGGCGGTCTA+AGG - chr5_3:12487485-12487504 Msa0799310:intron 45.0%
!! TCACTACAAGTGCCGAATCA+AGG - chr5_3:12487877-12487896 Msa0799310:intron 45.0%
! AGTAGCGACAACCTTTTCTG+TGG + chr5_3:12487943-12487962 None:intergenic 45.0%
!! GAAAGGGTTGATAATGGGCA+TGG + chr5_3:12487980-12487999 None:intergenic 45.0%
TGATTGAAAAGGGAGGAGGA+GGG + chr5_3:12488079-12488098 None:intergenic 45.0%
TTGATTGAAAAGGGAGGAGG+AGG + chr5_3:12488080-12488099 None:intergenic 45.0%
TAGCCCACCTAAATTGACAC+CGG - chr5_3:12488132-12488151 Msa0799310:CDS 45.0%
! TCACCGGTGTCAATTTAGGT+GGG + chr5_3:12488138-12488157 None:intergenic 45.0%
GATGATTCCCGGATCAATGA+TGG + chr5_3:12488390-12488409 None:intergenic 45.0%
TGAGACATGATCCTTGATCC+CGG + chr5_3:12488426-12488445 None:intergenic 45.0%
!!! AGACTTTTTTTCCCTGGCCA+AGG + chr5_3:12488478-12488497 None:intergenic 45.0%
GCCAGGGAAAAAAAGTCTGT+TGG - chr5_3:12488480-12488499 Msa0799310:intron 45.0%
!!! CCCAACAGACTTTTTTTCCC+TGG + chr5_3:12488484-12488503 None:intergenic 45.0%
!!! ATGCTTTTTTATGGGCCTCC+TGG - chr5_3:12488615-12488634 Msa0799310:intron 45.0%
!!! TGCTTTTTTATGGGCCTCCT+GGG - chr5_3:12488616-12488635 Msa0799310:intron 45.0%
CTGGTAAAACCATGGTTGCA+AGG - chr5_3:12488640-12488659 Msa0799310:intron 45.0%
! AGCTATTTCCCTTGCAACCA+TGG + chr5_3:12488652-12488671 None:intergenic 45.0%
! GACAAGTTGGCATGAATTCC+TGG - chr5_3:12488824-12488843 Msa0799310:intron 45.0%
TTGACACTGCTGCCTACAAA+TGG - chr5_3:12488910-12488929 Msa0799310:intron 45.0%
ACTGCAAGACTTACTCGCAA+AGG + chr5_3:12489433-12489452 None:intergenic 45.0%
GTGATTGAATTCCCACTTCC+AGG - chr5_3:12489919-12489938 Msa0799310:intron 45.0%
TGAAAGTAATGGCTCCAAGG+GGG - chr5_3:12489996-12490015 Msa0799310:intron 45.0%
ATCAGAAGACGTGCTGAAAG+AGG - chr5_3:12490065-12490084 Msa0799310:CDS 45.0%
CCATGAGTTTGGCTATCTCA+CGG + chr5_3:12490119-12490138 None:intergenic 45.0%
TTAAAACTGGCAGCTGAAGG+CGG - chr5_3:12490240-12490259 Msa0799310:intron 45.0%
TTACATTTGATCAGGCAGGG+AGG + chr5_3:12490266-12490285 None:intergenic 45.0%
ACGAAAAGAACAGGTTCTGC+TGG + chr5_3:12490445-12490464 None:intergenic 45.0%
ATTTCTACGCTCTCAAGACC+TGG + chr5_3:12490486-12490505 None:intergenic 45.0%
!!! TTTTTAATTATCATTTTTTT+TGG - chr5_3:12484058-12484077 Msa0799310:CDS 5.0%
!!! ATAATTTAAAACTTTATTTT+TGG + chr5_3:12488451-12488470 None:intergenic 5.0%
TTCCGCTAAAACCCTAACCG+AGG - chr5_3:12483700-12483719 Msa0799310:three_prime_UTR 50.0%
TCCGCTAAAACCCTAACCGA+GGG - chr5_3:12483701-12483720 Msa0799310:three_prime_UTR 50.0%
!! ACCCTCGGTTAGGGTTTTAG+CGG + chr5_3:12483705-12483724 None:intergenic 50.0%
CGAGGTTAAACCCTCGGTTA+GGG + chr5_3:12483714-12483733 None:intergenic 50.0%
GGAAATGGAGGTTCAGAGCA+TGG + chr5_3:12483739-12483758 None:intergenic 50.0%
AGATTCGGAGTAAGCGGGAT+TGG + chr5_3:12483847-12483866 None:intergenic 50.0%
TTCCAATTCACCTCCGCCAA+CGG - chr5_3:12483899-12483918 Msa0799310:three_prime_UTR 50.0%
! TCAGATGATTGGTCCGTTGG+CGG + chr5_3:12483915-12483934 None:intergenic 50.0%
TTATTAGGTTCTTCCGCCGG+CGG + chr5_3:12483957-12483976 None:intergenic 50.0%
ATCATCATCATCCTCCCCCT+AGG - chr5_3:12484865-12484884 Msa0799310:intron 50.0%
GGGGACAATTCAACCCACTT+GGG - chr5_3:12485554-12485573 Msa0799310:intron 50.0%
ACGAAAGGAGCAGGCAAGAA+AGG - chr5_3:12485967-12485986 Msa0799310:intron 50.0%
CAAACATGGAAGGACGTGAG+TGG + chr5_3:12486769-12486788 None:intergenic 50.0%
CACCGCTCTCTACTAAATGC+AGG - chr5_3:12487475-12487494 Msa0799310:intron 50.0%
CGCCTGCATTTAGTAGAGAG+CGG + chr5_3:12487480-12487499 None:intergenic 50.0%
CGCTCTCTACTAAATGCAGG+CGG - chr5_3:12487478-12487497 Msa0799310:intron 50.0%
! CTGCAGGAGTATATACGACG+AGG - chr5_3:12487566-12487585 Msa0799310:intron 50.0%
ATTGAAAAGGGAGGAGGAGG+GGG + chr5_3:12488077-12488096 None:intergenic 50.0%
GATTGAAAAGGGAGGAGGAG+GGG + chr5_3:12488078-12488097 None:intergenic 50.0%
! CTCACCGGTGTCAATTTAGG+TGG + chr5_3:12488139-12488158 None:intergenic 50.0%
CTCTCAGGTTCGATTCTCAC+CGG + chr5_3:12488154-12488173 None:intergenic 50.0%
TGAGAATCGAACCTGAGAGG+AGG - chr5_3:12488155-12488174 Msa0799310:CDS 50.0%
!! TGGCCTAGTGGTATTGGCTT+GGG + chr5_3:12488196-12488215 None:intergenic 50.0%
!! TTGGCCTAGTGGTATTGGCT+TGG + chr5_3:12488197-12488216 None:intergenic 50.0%
!! TTGGGTTGGCCTAGTGGTAT+TGG + chr5_3:12488202-12488221 None:intergenic 50.0%
TGGCAAAGTTTCCGGGATCA+AGG - chr5_3:12488412-12488431 Msa0799310:intron 50.0%
ACGGGCAACATCAAACACGA+AGG - chr5_3:12488569-12488588 Msa0799310:intron 50.0%
ATCAAACACGAAGGCCCATC+AGG - chr5_3:12488578-12488597 Msa0799310:intron 50.0%
GTTACGAAACGGTGCCTGAT+GGG + chr5_3:12488595-12488614 None:intergenic 50.0%
TGTTACGAAACGGTGCCTGA+TGG + chr5_3:12488596-12488615 None:intergenic 50.0%
!! ATGGTTTTACCAGTCCCAGG+AGG + chr5_3:12488633-12488652 None:intergenic 50.0%
! TCCTGGGACTGGTAAAACCA+TGG - chr5_3:12488632-12488651 Msa0799310:intron 50.0%
!! ACCATGGTTTTACCAGTCCC+AGG + chr5_3:12488636-12488655 None:intergenic 50.0%
TGAATTCCCACTTCCAGGAG+AGG - chr5_3:12489924-12489943 Msa0799310:intron 50.0%
TTAAGACGTTCCTCCTCTCC+TGG + chr5_3:12489940-12489959 None:intergenic 50.0%
GAAAGTAATGGCTCCAAGGG+GGG - chr5_3:12489997-12490016 Msa0799310:intron 50.0%
AGAGGCTGCCAAGAAAACAG+AGG - chr5_3:12490083-12490102 Msa0799310:CDS 50.0%
GAGGCTGCCAAGAAAACAGA+GGG - chr5_3:12490084-12490103 Msa0799310:CDS 50.0%
AGGCTGCCAAGAAAACAGAG+GGG - chr5_3:12490085-12490104 Msa0799310:CDS 50.0%
CCGTGAGATAGCCAAACTCA+TGG - chr5_3:12490116-12490135 Msa0799310:intron 50.0%
TTAGAATCCAAGGCGCAGTC+AGG + chr5_3:12490171-12490190 None:intergenic 50.0%
!! AGGTGGTGGAACATCATCAG+CGG - chr5_3:12490217-12490236 Msa0799310:intron 50.0%
CGGTTAAAACTGGCAGCTGA+AGG - chr5_3:12490237-12490256 Msa0799310:intron 50.0%
GCTATATGGAGCAAGAAGCC+AGG - chr5_3:12490465-12490484 Msa0799310:CDS 50.0%
GCGAGGTTAAACCCTCGGTT+AGG + chr5_3:12483715-12483734 None:intergenic 55.0%
ATGGCGCGAGGTTAAACCCT+CGG + chr5_3:12483720-12483739 None:intergenic 55.0%
GTAAGCGGGATTGGATTGCG+AGG + chr5_3:12483838-12483857 None:intergenic 55.0%
GTTGGCGGAGGTGAATTGGA+AGG + chr5_3:12483900-12483919 None:intergenic 55.0%
ACAAGAGCAGAACCAGAGGC+AGG - chr5_3:12485054-12485073 Msa0799310:intron 55.0%
CGGGGACAATTCAACCCACT+TGG - chr5_3:12485553-12485572 Msa0799310:intron 55.0%
!! TTGGGTTGGCCTGGTGGTAT+TGG - chr5_3:12485572-12485591 Msa0799310:intron 55.0%
!! TTGGCCTGGTGGTATTGGCT+TGG - chr5_3:12485577-12485596 Msa0799310:intron 55.0%
!! TGGCCTGGTGGTATTGGCTT+GGG - chr5_3:12485578-12485597 Msa0799310:intron 55.0%
GAATCGAACCTGAGACCTCG+AGG + chr5_3:12485622-12485641 None:intergenic 55.0%
!! GAGAGCGGTGTCATCAATCG+CGG + chr5_3:12487465-12487484 None:intergenic 55.0%
GGAGCTACTGCATTAGCTGC+AGG - chr5_3:12487550-12487569 Msa0799310:intron 55.0%
CGGTGAGAATCGAACCTGAG+AGG - chr5_3:12488152-12488171 Msa0799310:CDS 55.0%
!! GTGGTATTGGCTTGGGACCT+GGG + chr5_3:12488189-12488208 None:intergenic 55.0%
!! AGTGGTATTGGCTTGGGACC+TGG + chr5_3:12488190-12488209 None:intergenic 55.0%
GGTCCCAAGCCAATACCACT+AGG - chr5_3:12488190-12488209 Msa0799310:CDS 55.0%
!! ACGAACTTGGGTTGGCCTAG+TGG + chr5_3:12488208-12488227 None:intergenic 55.0%
TGGGGCAGCCATCATTGATC+CGG - chr5_3:12488379-12488398 Msa0799310:CDS 55.0%
! TTTTATGGGCCTCCTGGGAC+TGG - chr5_3:12488621-12488640 Msa0799310:intron 55.0%
TGGAGGAGATGTTGCACCTC+TGG - chr5_3:12489313-12489332 Msa0799310:intron 55.0%
GGAGGAGATGTTGCACCTCT+GGG - chr5_3:12489314-12489333 Msa0799310:intron 55.0%
GTGCTTGCGACAAACAGACC+AGG - chr5_3:12489859-12489878 Msa0799310:intron 55.0%
ATTCCCACTTCCAGGAGAGG+AGG - chr5_3:12489927-12489946 Msa0799310:intron 55.0%
GTTCCTCCTCTCCTGGAAGT+GGG + chr5_3:12489933-12489952 None:intergenic 55.0%
TTGGACGCTGGCCATGAGTT+TGG + chr5_3:12490130-12490149 None:intergenic 55.0%
ATAGACAGCAGCTTGGACGC+TGG + chr5_3:12490142-12490161 None:intergenic 55.0%
AGCGTCCAAGCTGCTGTCTA+TGG - chr5_3:12490141-12490160 Msa0799310:intron 55.0%
GCGTCCAAGCTGCTGTCTAT+GGG - chr5_3:12490142-12490161 Msa0799310:intron 55.0%
GGAGATTGAAGCCGCTGCAG+CGG + chr5_3:12483817-12483836 None:intergenic 60.0%
GTCCGTTGGCGGAGGTGAAT+TGG + chr5_3:12483904-12483923 None:intergenic 60.0%
! GATGATTGGTCCGTTGGCGG+AGG + chr5_3:12483912-12483931 None:intergenic 60.0%
CAAATCGGATTCACCGCCGC+CGG - chr5_3:12483938-12483957 Msa0799310:three_prime_UTR 60.0%
TGCACTTATGGCCTAGGGGG+AGG + chr5_3:12484879-12484898 None:intergenic 60.0%
GTAACACCTGAGCCTGCCTC+TGG + chr5_3:12485069-12485088 None:intergenic 60.0%
!! TCAACCCACTTGGGTTGGCC+TGG - chr5_3:12485563-12485582 Msa0799310:intron 60.0%
ACCACCAGGCCAACCCAAGT+GGG + chr5_3:12485570-12485589 None:intergenic 60.0%
TACCACCAGGCCAACCCAAG+TGG + chr5_3:12485571-12485590 None:intergenic 60.0%
!! GGCCTGGTGGTATTGGCTTG+GGG - chr5_3:12485579-12485598 Msa0799310:intron 60.0%
!! GTGGTATTGGCTTGGGGCCT+GGG - chr5_3:12485585-12485604 Msa0799310:intron 60.0%
TCGAACCTGAGACCTCGAGG+AGG + chr5_3:12485619-12485638 None:intergenic 60.0%
GGGGCAGCCATCATTGATCC+GGG - chr5_3:12488380-12488399 Msa0799310:CDS 60.0%
CGTTCCTCCTCTCCTGGAAG+TGG + chr5_3:12489934-12489953 None:intergenic 60.0%
GACGCCCATAGACAGCAGCT+TGG + chr5_3:12490149-12490168 None:intergenic 60.0%
GAGGTTCAGAGCATGGCGCG+AGG + chr5_3:12483732-12483751 None:intergenic 65.0%
GATTGAAGCCGCTGCAGCGG+CGG + chr5_3:12483814-12483833 None:intergenic 65.0%
TTAGGTTCTTCCGCCGGCGG+CGG + chr5_3:12483954-12483973 None:intergenic 65.0%
GCAGAACCAGAGGCAGGCTC+AGG - chr5_3:12485060-12485079 Msa0799310:intron 65.0%
!! ACCCACTTGGGTTGGCCTGG+TGG - chr5_3:12485566-12485585 Msa0799310:intron 65.0%
GGCCCCAAGCCAATACCACC+AGG + chr5_3:12485584-12485603 None:intergenic 65.0%
!! GGTGGTATTGGCTTGGGGCC+TGG - chr5_3:12485584-12485603 Msa0799310:intron 65.0%
! TCGAGGAGGAGCACACTCCC+AGG + chr5_3:12485605-12485624 None:intergenic 65.0%
! TGGGAGTGTGCTCCTCCTCG+AGG - chr5_3:12485604-12485623 Msa0799310:intron 65.0%
GTGCTCCTCCTCGAGGTCTC+AGG - chr5_3:12485611-12485630 Msa0799310:intron 65.0%
GAAAAGGGAGGAGGAGGGGG+AGG + chr5_3:12488074-12488093 None:intergenic 65.0%
! GGGAGTGTGCTCCTCCTCTC+AGG + chr5_3:12488169-12488188 None:intergenic 65.0%
! GAGAGGAGGAGCACACTCCC+AGG - chr5_3:12488169-12488188 Msa0799310:CDS 65.0%
TGTTGCACCTCTGGGCCCAC+AGG - chr5_3:12489322-12489341 Msa0799310:intron 65.0%
GTAACAGCCTGTGGGCCCAG+AGG + chr5_3:12489332-12489351 None:intergenic 65.0%
ATCGGATTCACCGCCGCCGG+CGG - chr5_3:12483941-12483960 Msa0799310:three_prime_UTR 70.0%
TGGGCGTCCTGACTGCGCCT+TGG - chr5_3:12490161-12490180 Msa0799310:intron 70.0%
GGTGGCTGCGGCGAGGCATG+AGG + chr5_3:12483793-12483812 None:intergenic 75.0%
TGAAGCCGCTGCAGCGGCGG+TGG + chr5_3:12483811-12483830 None:intergenic 75.0%
! CGCTGCAGCGGCGGTGGCTG+CGG + chr5_3:12483805-12483824 None:intergenic 80.0%
! CGCAGCCACCGCCGCTGCAG+CGG - chr5_3:12483803-12483822 Msa0799310:three_prime_UTR 80.0%
! CAGCGGCGGTGGCTGCGGCG+AGG + chr5_3:12483800-12483819 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 12483675 12490648 12483675 ID=Msa0799310;Name=Msa0799310
chr5_3 mRNA 12483675 12490648 12483675 ID=Msa0799310-mRNA-1;Parent=Msa0799310;Name=Msa0799310-mRNA-1;_AED=0.14;_eAED=0.14;_QI=96|0.75|0.88|0.88|1|1|9|373|657
chr5_3 exon 12483675 12484555 12483675 ID=Msa0799310-mRNA-1:exon:5185;Parent=Msa0799310-mRNA-1
chr5_3 exon 12484885 12485033 12484885 ID=Msa0799310-mRNA-1:exon:5184;Parent=Msa0799310-mRNA-1
chr5_3 exon 12485643 12485985 12485643 ID=Msa0799310-mRNA-1:exon:5183;Parent=Msa0799310-mRNA-1
chr5_3 exon 12486736 12486826 12486736 ID=Msa0799310-mRNA-1:exon:5182;Parent=Msa0799310-mRNA-1
chr5_3 exon 12488112 12488421 12488112 ID=Msa0799310-mRNA-1:exon:5181;Parent=Msa0799310-mRNA-1
chr5_3 exon 12488698 12488778 12488698 ID=Msa0799310-mRNA-1:exon:5180;Parent=Msa0799310-mRNA-1
chr5_3 exon 12489200 12489310 12489200 ID=Msa0799310-mRNA-1:exon:5179;Parent=Msa0799310-mRNA-1
chr5_3 exon 12490031 12490126 12490031 ID=Msa0799310-mRNA-1:exon:5178;Parent=Msa0799310-mRNA-1
chr5_3 exon 12490268 12490648 12490268 ID=Msa0799310-mRNA-1:exon:5177;Parent=Msa0799310-mRNA-1
chr5_3 five_prime_UTR 12490553 12490648 12490553 ID=Msa0799310-mRNA-1:five_prime_utr;Parent=Msa0799310-mRNA-1
chr5_3 CDS 12490268 12490552 12490268 ID=Msa0799310-mRNA-1:cds;Parent=Msa0799310-mRNA-1
chr5_3 CDS 12490031 12490126 12490031 ID=Msa0799310-mRNA-1:cds;Parent=Msa0799310-mRNA-1
chr5_3 CDS 12489200 12489310 12489200 ID=Msa0799310-mRNA-1:cds;Parent=Msa0799310-mRNA-1
chr5_3 CDS 12488698 12488778 12488698 ID=Msa0799310-mRNA-1:cds;Parent=Msa0799310-mRNA-1
chr5_3 CDS 12488112 12488421 12488112 ID=Msa0799310-mRNA-1:cds;Parent=Msa0799310-mRNA-1
chr5_3 CDS 12486736 12486826 12486736 ID=Msa0799310-mRNA-1:cds;Parent=Msa0799310-mRNA-1
chr5_3 CDS 12485643 12485985 12485643 ID=Msa0799310-mRNA-1:cds;Parent=Msa0799310-mRNA-1
chr5_3 CDS 12484885 12485033 12484885 ID=Msa0799310-mRNA-1:cds;Parent=Msa0799310-mRNA-1
chr5_3 CDS 12484048 12484555 12484048 ID=Msa0799310-mRNA-1:cds;Parent=Msa0799310-mRNA-1
chr5_3 three_prime_UTR 12483675 12484047 12483675 ID=Msa0799310-mRNA-1:three_prime_utr;Parent=Msa0799310-mRNA-1
Gene Sequence

>Msa0799310

ATGTCCGCCGCTAAATTAACCTCATGCCTCGCCGCAGCCACCGCCGCTGCAGCGGCTTCAATCTCCTCGCAATCCAATCCCGCTTACTCCGAATCTTTCTTCCGTTTCCCCTTTTTCTCTTCTTCACCTTCCAATTCACCTCCGCCAACGGACCAATCATCTGATAACAAATCGGATTCACCGCCGCCGGCGGAAGAACCTAATAAGTCCGGTTTTGATCCTGAATCGTTAGAAAGAGCTGCTAAAGCTCTCCGTGAAATCAATAATTCTCCTCACGCTAAAAAGGTGTTTGATTTAATGCGTAAACAAGAACAATCTCGTCTTGCTGAGTTAGATGCTGAAAAAGTTAATTATGAACTTATTCAGACTCAAGGAGATATTGATAGGTTGCGTAAAATGGCTGAAGAACAACGAAATCTAATACAAGAGCAGAACCAGAGGCAGGCTCAGGTGTTACGATTTGAAGATGAATTGGCAAGGAAAAGAATGCAGTCTAACTACGGGGACAATTCAACCCACTTGGGTTGGCCTGGTGGTATTGGCTTGGGGCCTGGGAGTGTGCTCCTCCTCGAGACAGATCATGAAGATCAAAGGCGACATAATGTTGAGTTGGTCCAGATGCAAGAGAAGTCTTTTGTACGAAAGGAGCAGGCAAGAAAGGATTCCGAAGAACAGATTCAAGCTAAGAAACGTGTGACTCAGCAACAGAAAGCGGAAATAGAAAAAGAAACTGCTAGAACTAAGGAAATTGCAGAGGCTGAAAAACGAATCCTTTTTACGCAATTGACAGAGGAGCAAACCAGGAGAGAGCTTAAAGAGAAACTGCAGGGGGAAAGAGATAAATGGATTGCTTCAATTAATGCTACTTTTAGTCATATTGAAGGCGGTCTAAGGATATTATTGACCGATAGGGACAAATTGCTTATGACTGTTGGTGGAGCTACTGCATTAGCTGCAGGAGTATATACGACGAGAGAAGGTGCAAAAGTAACATGGGGATATATTAATCGGATTCTGGGGCAGCCATCATTGATCCGGGAATCATCAATGGCAAAGTTTCCGGGATCAAGGATCATGTCTCAAGCCAAAAATAAAGTTTTAAATTATAGTACCTTGGCCAGGGAAAAAAAGTCTGTTGGGATTCAAAATGGTCTTGGAAATGTAATCTTGCATCCCTCATTGCAGAGAAGAATAGTGCATTTAGCACGGGCAACATCAAACACGAAGGCCCATCAGGCACCGTTTCGTAACATGCTTTTTTATGGGCCTCCTGGGACTGGTAAAACCATGGTTGCAAGGGAAATAGCTAGAAAATCGGGTTTGGATTATGCAATGATGACTGGAGGAGATGTTGCACCTCTGGGCCCACAGGCTGTTACCAAAATTCACGAGATATTTGATTGGGCCAAGAAATCTAAAAGAGGCCTGTTGCTTTTTATTGACGAGGCAGATGCTTTCCTTTGCGAGCGTAATAGCTCACACATGAGTGAAGCTCAACGAAGTGCCCTAAATGCATTGCTTTTCAGAACTGGTGATCAGTCTAGAGACATAGTACTTGTGCTTGCGACAAACAGACCAGGAGATCTTGATAGTGCAATTACTGATCGCATTGATGAAGTGATTGAATTCCCACTTCCAGGAGAGGAGGAACGTCTTAAGTTATTGAATCTCTATTTGAACAAGTATCTATGTGATGAAAGTAATGGCTCCAAGGGGGGATTATTTATGAAGAAGCAGCCCCAGAAAATTACCATAAAAGATTTATCAGAAGACGTGCTGAAAGAGGCTGCCAAGAAAACAGAGGGGTTTTCTGGCCGTGAGATAGCCAAACTCATGGCCAGCGTCCAAGCTGCTGTCTATGGGCGTCCTGACTGCGCCTTGGATTCTAAGTTGTTTAGAGAAATTGTTGATTACAAGGTGGTGGAACATCATCAGCGGTTAAAACTGGCAGCTGAAGGCGGCCTCCCTGCCTGA
Protein sequence

>Msa0799310

MSAAKLTSCLAAATAAAAASISSQSNPAYSESFFRFPFFSSSPSNSPPPTDQSSDNKSDSPPPAEEPNKSGFDPESLERAAKALREINNSPHAKKVFDLMRKQEQSRLAELDAEKVNYELIQTQGDIDRLRKMAEEQRNLIQEQNQRQAQVLRFEDELARKRMQSNYGDNSTHLGWPGGIGLGPGSVLLLETDHEDQRRHNVELVQMQEKSFVRKEQARKDSEEQIQAKKRVTQQQKAEIEKETARTKEIAEAEKRILFTQLTEEQTRRELKEKLQGERDKWIASINATFSHIEGGLRILLTDRDKLLMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGSRIMSQAKNKVLNYSTLAREKKSVGIQNGLGNVILHPSLQRRIVHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSKRGLLLFIDEADAFLCERNSSHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPGEEERLKLLNLYLNKYLCDESNGSKGGLFMKKQPQKITIKDLSEDVLKEAAKKTEGFSGREIAKLMASVQAAVYGRPDCALDSKLFREIVDYKVVEHHQRLKLAAEGGLPA*