Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356400 | XP_013450684.1 | 95.395 | 304 | 12 | 1 | 1 | 304 | 1 | 302 | 0.0 | 592 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356400 | sp|B9SEZ6|EFTS_RICCO | 65.373 | 335 | 85 | 4 | 1 | 304 | 1 | 335 | 7.51e-145 | 419 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356400 | A0A072U4T1 | 95.395 | 304 | 12 | 1 | 1 | 304 | 1 | 302 | 0.0 | 592 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021220 | Msa1356400 | 0.808061 | 3.726414e-50 | -8.615850e-47 |
| Msa0030200 | Msa1356400 | 0.817883 | 2.617698e-52 | -8.615850e-47 |
| Msa0070700 | Msa1356400 | 0.801389 | 9.214075e-49 | -8.615850e-47 |
| Msa0079820 | Msa1356400 | 0.801678 | 8.037617e-49 | -8.615850e-47 |
| Msa0115130 | Msa1356400 | 0.801380 | 9.253068e-49 | -8.615850e-47 |
| Msa0118590 | Msa1356400 | 0.803647 | 3.154600e-49 | -8.615850e-47 |
| Msa0648780 | Msa1356400 | 0.827014 | 1.976260e-54 | -8.615850e-47 |
| Msa0659050 | Msa1356400 | 0.807027 | 6.175953e-50 | -8.615850e-47 |
| Msa0660850 | Msa1356400 | 0.855982 | 4.375284e-62 | -8.615850e-47 |
| Msa0687440 | Msa1356400 | 0.857924 | 1.171149e-62 | -8.615850e-47 |
| Msa0704980 | Msa1356400 | 0.852439 | 4.612856e-61 | -8.615850e-47 |
| Msa0709730 | Msa1356400 | 0.825342 | 4.940559e-54 | -8.615850e-47 |
| Msa0719610 | Msa1356400 | 0.812280 | 4.590851e-51 | -8.615850e-47 |
| Msa0757940 | Msa1356400 | 0.850176 | 2.010780e-60 | -8.615850e-47 |
| Msa0763330 | Msa1356400 | 0.812991 | 3.208607e-51 | -8.615850e-47 |
| Msa0772510 | Msa1356400 | 0.832717 | 8.062211e-56 | -8.615850e-47 |
| Msa0798480 | Msa1356400 | 0.809598 | 1.748406e-50 | -8.615850e-47 |
| Msa0799260 | Msa1356400 | 0.860530 | 1.936823e-63 | -8.615850e-47 |
| Msa0799310 | Msa1356400 | 0.863097 | 3.174178e-64 | -8.615850e-47 |
| Msa0837630 | Msa1356400 | 0.824039 | 1.001770e-53 | -8.615850e-47 |
| Msa0139350 | Msa1356400 | 0.815674 | 8.190604e-52 | -8.615850e-47 |
| Msa0144370 | Msa1356400 | 0.810787 | 9.688083e-51 | -8.615850e-47 |
| Msa0164770 | Msa1356400 | 0.850014 | 2.233150e-60 | -8.615850e-47 |
| Msa0170200 | Msa1356400 | 0.812012 | 5.250776e-51 | -8.615850e-47 |
| Msa0188440 | Msa1356400 | 0.830941 | 2.211880e-55 | -8.615850e-47 |
| Msa0231030 | Msa1356400 | 0.801537 | 8.591806e-49 | -8.615850e-47 |
| Msa0398810 | Msa1356400 | 0.824634 | 7.257105e-54 | -8.615850e-47 |
| Msa1025460 | Msa1356400 | 0.811629 | 6.361774e-51 | -8.615850e-47 |
| Msa0278910 | Msa1356400 | 0.806743 | 7.090906e-50 | -8.615850e-47 |
| Msa0325590 | Msa1356400 | 0.820267 | 7.505998e-53 | -8.615850e-47 |
| Msa1153060 | Msa1356400 | 0.839787 | 1.285522e-57 | -8.615850e-47 |
| Msa1209850 | Msa1356400 | 0.814750 | 1.313839e-51 | -8.615850e-47 |
| Msa0485510 | Msa1356400 | 0.803125 | 4.046091e-49 | -8.615850e-47 |
| Msa0573140 | Msa1356400 | 0.803768 | 2.978279e-49 | -8.615850e-47 |
| Msa0869130 | Msa1356400 | 0.807254 | 5.528570e-50 | -8.615850e-47 |
| Msa0879540 | Msa1356400 | 0.802363 | 5.814189e-49 | -8.615850e-47 |
| Msa0930490 | Msa1356400 | 0.820097 | 8.212871e-53 | -8.615850e-47 |
| Msa0933300 | Msa1356400 | 0.802492 | 5.468160e-49 | -8.615850e-47 |
| Msa0970880 | Msa1356400 | 0.802794 | 4.736797e-49 | -8.615850e-47 |
| Msa0970920 | Msa1356400 | 0.822792 | 1.959926e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356400 | MtrunA17_Chr6g0448841 | 95.395 | 304 | 12 | 1 | 1 | 304 | 1 | 302 | 0.0 | 592 |
| Msa1356400 | MtrunA17_Chr6g0486531 | 47.872 | 94 | 48 | 1 | 32 | 124 | 853 | 946 | 8.11e-17 | 82.8 |
| Msa1356400 | MtrunA17_Chr6g0486531 | 32.663 | 199 | 95 | 6 | 18 | 178 | 598 | 795 | 1.34e-16 | 82.4 |
| Msa1356400 | MtrunA17_Chr6g0486241 | 35.366 | 164 | 81 | 5 | 33 | 195 | 48 | 187 | 1.44e-14 | 72.0 |
| Msa1356400 | MtrunA17_Chr7g0223561 | 60.000 | 75 | 21 | 2 | 296 | 367 | 245 | 313 | 6.26e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1356400 | AT4G11120.1 | 69.858 | 282 | 80 | 1 | 28 | 304 | 72 | 353 | 1.95e-143 | 414 |
| Msa1356400 | AT4G29060.2 | 34.463 | 177 | 85 | 3 | 33 | 178 | 523 | 699 | 2.73e-19 | 90.5 |
| Msa1356400 | AT4G29060.1 | 33.871 | 186 | 80 | 5 | 33 | 178 | 761 | 943 | 9.67e-19 | 89.4 |
| Msa1356400 | AT4G29060.1 | 50.538 | 93 | 45 | 1 | 33 | 124 | 523 | 615 | 6.39e-18 | 86.7 |
Find 123 sgRNAs with CRISPR-Local
Find 582 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTCAGTAGCCTAATTTA+AGG | 0.197560 | tig0015628:-24361 | Msa1356400:three_prime_UTR |
| ATGTTGAAAGATGTCATTTC+TGG | 0.205279 | tig0015628:+32192 | None:intergenic |
| TGCTCAGGTAGCCTAATTTA+AGG | 0.239560 | tig0015628:-24434 | Msa1356400:exon |
| AGCGGCTTTCACGTCCTTAA+TGG | 0.242559 | tig0015628:+32387 | None:intergenic |
| CTTTGAAAATGTTGTGCTTA+TGG | 0.244964 | tig0015628:-30105 | Msa1356400:CDS |
| GCACTGAATCACCTTAAATT+AGG | 0.267244 | tig0015628:+24350 | None:intergenic |
| GCACTGAATCACCTTAAATT+AGG | 0.267244 | tig0015628:+24423 | None:intergenic |
| AACAAAGGAACTTGTGTCTT+TGG | 0.272170 | tig0015628:-31012 | Msa1356400:CDS |
| AGTTCCTTTGTTAAGAATAA+TGG | 0.280027 | tig0015628:+31023 | None:intergenic |
| GTAGTTTCTCCATTGATCTT+TGG | 0.286688 | tig0015628:+31978 | None:intergenic |
| TAGAAAAGTTGGTAGAAAAT+AGG | 0.288105 | tig0015628:-27721 | Msa1356400:CDS |
| TACGGATGAACCCACCTCTT+TGG | 0.288259 | tig0015628:+25740 | None:intergenic |
| TTAGGTTTGGGTCGCATTGC+TGG | 0.309704 | tig0015628:-31140 | Msa1356400:intron |
| TATCATTAATAACAAACTTT+TGG | 0.309796 | tig0015628:+30081 | None:intergenic |
| GAAAATAGGCTTAGATGGTT+TGG | 0.322680 | tig0015628:-27707 | Msa1356400:CDS |
| CTTTGGTCCTCAATCGTTAG+AGG | 0.326457 | tig0015628:-32113 | Msa1356400:intron |
| AACTTTCCAGGATCAATAAA+TGG | 0.331386 | tig0015628:+24244 | None:intergenic |
| AAATGACATCTTTCAACATT+TGG | 0.335048 | tig0015628:-32188 | Msa1356400:CDS |
| CGCTAATCAAGCTTTGTTGT+TGG | 0.336859 | tig0015628:-32155 | Msa1356400:CDS |
| ACCTTCAACCATTCTGTCTA+TGG | 0.338970 | tig0015628:+30142 | None:intergenic |
| GAGAAAATGTAGAGAGGGAG+TGG | 0.341806 | tig0015628:-27759 | Msa1356400:CDS |
| AAGAACAAGCGCTCCCATTA+AGG | 0.341980 | tig0015628:-32401 | Msa1356400:CDS |
| TGGTAGAAAATAGGCTTAGA+TGG | 0.349489 | tig0015628:-27712 | Msa1356400:CDS |
| ATTGTACCTCAAAACTTTCC+AGG | 0.364319 | tig0015628:+24232 | None:intergenic |
| TGTCTCTTTGCAGGAGGTGC+TGG | 0.369227 | tig0015628:-25772 | Msa1356400:intron |
| AACCATTAGAAAAGATTTAG+AGG | 0.369865 | tig0015628:-27591 | Msa1356400:intron |
| ATCTTATCTCTTGAAGTTGA+TGG | 0.381841 | tig0015628:-31116 | Msa1356400:CDS |
| GCGGCTTTCACGTCCTTAAT+GGG | 0.382230 | tig0015628:+32388 | None:intergenic |
| TCAACGTGTTGGATCAGAAT+TGG | 0.389217 | tig0015628:-31069 | Msa1356400:CDS |
| CGCTCTCGTCGATTCCAATT+GGG | 0.393868 | tig0015628:-32368 | Msa1356400:CDS |
| CCGCTCTCGTCGATTCCAAT+TGG | 0.397858 | tig0015628:-32369 | Msa1356400:CDS |
| CATGCTCCATTTATTGATCC+TGG | 0.409582 | tig0015628:-24250 | Msa1356400:three_prime_UTR |
| AGATCAAATGGAGGAGAGTC+AGG | 0.409734 | tig0015628:-27642 | Msa1356400:CDS |
| AGCGGTTCGAGATGATTTCT+TGG | 0.412539 | tig0015628:+32294 | None:intergenic |
| AGCTGCTTCTAAATCCCAAT+TGG | 0.417167 | tig0015628:+32354 | None:intergenic |
| GCTTTCTCAGAATGGAAGTT+GGG | 0.418439 | tig0015628:-25707 | Msa1356400:CDS |
| TCTTCTTACAACGGCATCTA+CGG | 0.424045 | tig0015628:+27667 | None:intergenic |
| ATCTCCATCACTCGCCGCCA+TGG | 0.425643 | tig0015628:-32536 | Msa1356400:exon |
| GTGATGCACGCACCATCTAA+TGG | 0.439679 | tig0015628:-31888 | Msa1356400:CDS |
| ATATTTCAGGCAGAAGCCTC+TGG | 0.446318 | tig0015628:-30179 | Msa1356400:intron |
| GGTTGTAAGCTTTCTCAGAA+TGG | 0.446907 | tig0015628:-25715 | Msa1356400:CDS |
| AGTCAGGTTAAAAGAGGTAG+AGG | 0.455911 | tig0015628:-27626 | Msa1356400:CDS |
| TTCATCTGAGTCTGTTGCTC+AGG | 0.458062 | tig0015628:-24449 | Msa1356400:CDS |
| TAGGTTTGGGTCGCATTGCT+GGG | 0.464264 | tig0015628:-31139 | Msa1356400:CDS |
| ACGTGAAATTCTTAAATCTC+AGG | 0.465929 | tig0015628:-30973 | Msa1356400:intron |
| ACCAACTCTTCCTTTCACTT+TGG | 0.469243 | tig0015628:-32130 | Msa1356400:CDS |
| CTTGAACATCCAAAGATCAA+TGG | 0.475022 | tig0015628:-31987 | Msa1356400:CDS |
| CACTGAAGTAGCTGCCATCA+TGG | 0.475449 | tig0015628:-31940 | Msa1356400:CDS |
| GAAAATGTAGAGAGGGAGTG+GGG | 0.477638 | tig0015628:-27757 | Msa1356400:CDS |
| TGTAAGAAGAGTAGATCAAA+TGG | 0.483895 | tig0015628:-27654 | Msa1356400:CDS |
| AAGGTGATTCAGTGCAATAA+TGG | 0.496500 | tig0015628:-24342 | Msa1356400:three_prime_UTR |
| AAGGTGATTCAGTGCAATAA+TGG | 0.496500 | tig0015628:-24415 | Msa1356400:three_prime_UTR |
| AGCTTTCTCAGAATGGAAGT+TGG | 0.497230 | tig0015628:-25708 | Msa1356400:CDS |
| AGAAAATGTAGAGAGGGAGT+GGG | 0.499905 | tig0015628:-27758 | Msa1356400:CDS |
| GTAGATACAAGACCATTAGA+TGG | 0.500024 | tig0015628:+31876 | None:intergenic |
| AGCGAGAGCGAGTAAACCTT+CGG | 0.503696 | tig0015628:+32270 | None:intergenic |
| TCAGAAGGAACTCAGAAAGA+AGG | 0.504159 | tig0015628:-32332 | Msa1356400:CDS |
| CTTCACATTCTCTCCCATGA+TGG | 0.504791 | tig0015628:+31926 | None:intergenic |
| GAGAAAGCTTACAACCCTTA+CGG | 0.513891 | tig0015628:+25722 | None:intergenic |
| CCTTTCAGGGTCTATTTCGT+AGG | 0.515255 | tig0015628:-23988 | Msa1356400:intron |
| GAGGAGAGTCAGGTTAAAAG+AGG | 0.517218 | tig0015628:-27632 | Msa1356400:CDS |
| TCTCCATCACTCGCCGCCAT+GGG | 0.521411 | tig0015628:-32535 | Msa1356400:exon |
| TTGTAGAGAAAATGTAGAGA+GGG | 0.522583 | tig0015628:-27764 | Msa1356400:intron |
| GGCTACTCTGCTTAAACCCA+TGG | 0.524468 | tig0015628:+32519 | None:intergenic |
| ATTCTGTCTATGGCCTTCTG+AGG | 0.525528 | tig0015628:+30152 | None:intergenic |
| GGATTTAGAAGCAGCTCAGA+AGG | 0.526570 | tig0015628:-32347 | Msa1356400:CDS |
| ATGTATGTATGTTCACCAAA+GGG | 0.528871 | tig0015628:+32578 | None:intergenic |
| AGCACCTATAGTAGAAAAGT+TGG | 0.529249 | tig0015628:-27732 | Msa1356400:CDS |
| GAGCAGTTAGTTACCAGGTA+GGG | 0.530487 | tig0015628:+31836 | None:intergenic |
| GAGATAATGTTTGTTTCGAG+AGG | 0.530817 | tig0015628:-24306 | Msa1356400:three_prime_UTR |
| AAACCCATGGCGGCGAGTGA+TGG | 0.532026 | tig0015628:+32532 | None:intergenic |
| CAGAAGGAACTCAGAAAGAA+GGG | 0.532376 | tig0015628:-32331 | Msa1356400:CDS |
| TCATCTCGAACCGCTTCCGA+AGG | 0.538366 | tig0015628:-32286 | Msa1356400:CDS |
| TTTCATGCACAGACGTCTGC+CGG | 0.538625 | tig0015628:+32498 | None:intergenic |
| AAGAGGTGGGTTCATCCGTA+AGG | 0.540458 | tig0015628:-25737 | Msa1356400:CDS |
| GCAGATGCACTTCAACGTGT+TGG | 0.542478 | tig0015628:-31080 | Msa1356400:CDS |
| AGCAGTTAGTTACCAGGTAG+GGG | 0.545098 | tig0015628:+31837 | None:intergenic |
| AGCGAGTAAACCTTCGGAAG+CGG | 0.545132 | tig0015628:+32276 | None:intergenic |
| CTTCATACCAGTCCCCTACC+TGG | 0.545935 | tig0015628:-31849 | Msa1356400:intron |
| AGTCATTAAATATAATGAGT+TGG | 0.548247 | tig0015628:+24273 | None:intergenic |
| CTTCTTACAACGGCATCTAC+GGG | 0.551114 | tig0015628:+27668 | None:intergenic |
| AAAATGTAGAGAGGGAGTGG+GGG | 0.551403 | tig0015628:-27756 | Msa1356400:CDS |
| TGAGCAGTTAGTTACCAGGT+AGG | 0.553038 | tig0015628:+31835 | None:intergenic |
| GCCATAGACAGAATGGTTGA+AGG | 0.553039 | tig0015628:-30143 | Msa1356400:CDS |
| ACTGAAGTAGCTGCCATCAT+GGG | 0.558496 | tig0015628:-31939 | Msa1356400:CDS |
| TATGTATGTATGTTCACCAA+AGG | 0.560608 | tig0015628:+32577 | None:intergenic |
| ATGGGTTTAAGCAGAGTAGC+CGG | 0.567814 | tig0015628:-32517 | Msa1356400:CDS |
| GCAATTGAGTTCAACGAGAG+CGG | 0.568794 | tig0015628:+32231 | None:intergenic |
| AGCCTCTGGTAAACCTCAGA+AGG | 0.569054 | tig0015628:-30165 | Msa1356400:CDS |
| CTCAGAATGGAAGTTGGGGA+AGG | 0.569708 | tig0015628:-25702 | Msa1356400:CDS |
| GAGAATGTGAAGCTAAGAAG+AGG | 0.570254 | tig0015628:-31915 | Msa1356400:CDS |
| ATTTCGTAGGAGAAAACTGA+AGG | 0.571008 | tig0015628:-23975 | Msa1356400:three_prime_UTR |
| TAATTATTCAACATCATCTA+CGG | 0.571714 | tig0015628:-32461 | Msa1356400:CDS |
| AAGAAGAGTAGATCAAATGG+AGG | 0.572060 | tig0015628:-27651 | Msa1356400:CDS |
| GTGATGGAGATGACAGAGAA+AGG | 0.579110 | tig0015628:+32548 | None:intergenic |
| TCAGAAGGCCATAGACAGAA+TGG | 0.584037 | tig0015628:-30150 | Msa1356400:CDS |
| TTGATCTACTCTTCTTACAA+CGG | 0.585966 | tig0015628:+27658 | None:intergenic |
| ACCAAAGTGAAAGGAAGAGT+TGG | 0.586010 | tig0015628:+32129 | None:intergenic |
| GGATAATCTATCCAAAGAGG+TGG | 0.587087 | tig0015628:-25751 | Msa1356400:CDS |
| AAAACCATTATTCTTAACAA+AGG | 0.588617 | tig0015628:-31027 | Msa1356400:CDS |
| TTAGTTACCAGGTAGGGGAC+TGG | 0.588627 | tig0015628:+31842 | None:intergenic |
| TAATGATACTATAAAAGTGA+AGG | 0.594087 | tig0015628:-30066 | Msa1356400:intron |
| CTTTCTCAGAATGGAAGTTG+GGG | 0.602536 | tig0015628:-25706 | Msa1356400:CDS |
| AGAATTGGCCATGCATGTAG+TGG | 0.606879 | tig0015628:-31054 | Msa1356400:CDS |
| CGATTGAGGACCAAAGTGAA+AGG | 0.609237 | tig0015628:+32120 | None:intergenic |
| GGCCTTCTGAGGTTTACCAG+AGG | 0.611160 | tig0015628:+30163 | None:intergenic |
| CCAATTGGAATCGACGAGAG+CGG | 0.611818 | tig0015628:+32369 | None:intergenic |
| ATTGTAGAGAAAATGTAGAG+AGG | 0.615347 | tig0015628:-27765 | Msa1356400:intron |
| TTATCTCTTGAAGTTGATGG+TGG | 0.619105 | tig0015628:-31113 | Msa1356400:CDS |
| AGATGATGTTGAATAATTAG+CGG | 0.628468 | tig0015628:+32465 | None:intergenic |
| TGAGTTACCTCTAACGATTG+AGG | 0.629800 | tig0015628:+32106 | None:intergenic |
| GTGATTCAGTGCAATAATGG+AGG | 0.632295 | tig0015628:-24339 | Msa1356400:three_prime_UTR |
| GTGATTCAGTGCAATAATGG+AGG | 0.632295 | tig0015628:-24412 | Msa1356400:three_prime_UTR |
| AGAGGTGGGTTCATCCGTAA+GGG | 0.632469 | tig0015628:-25736 | Msa1356400:CDS |
| TTTCGTAGGAGAAAACTGAA+GGG | 0.635097 | tig0015628:-23974 | Msa1356400:three_prime_UTR |
| TTCGTAGGAGAAAACTGAAG+GGG | 0.642594 | tig0015628:-23973 | Msa1356400:three_prime_UTR |
| GTAGGAGAAAACTGAAGGGG+AGG | 0.661178 | tig0015628:-23970 | Msa1356400:three_prime_UTR |
| GATAATCTATCCAAAGAGGT+GGG | 0.662257 | tig0015628:-25750 | Msa1356400:CDS |
| AAAACTGAAGGGGAGGACAG+AGG | 0.664102 | tig0015628:-23963 | Msa1356400:three_prime_UTR |
| GCTGGATAATCTATCCAAAG+AGG | 0.672392 | tig0015628:-25754 | Msa1356400:CDS |
| TGATGTTGAATAATTAGCGG+CGG | 0.683012 | tig0015628:+32468 | None:intergenic |
| AAGTTGGGGAAGGAATTGCA+AGG | 0.699483 | tig0015628:-25692 | Msa1356400:intron |
| TACTCTGCTTAAACCCATGG+CGG | 0.727395 | tig0015628:+32522 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTTATTATTTTT+AGG | + | tig0015628:26816-26835 | None:intergenic | 0.0% |
| !!! | AAAAATTTATTTTAATATTT+CGG | - | tig0015628:27127-27146 | Msa1356400:intron | 0.0% |
| !!! | AATTTATAATTTATTTTTTT+CGG | - | tig0015628:27230-27249 | Msa1356400:intron | 0.0% |
| !!! | AAATTTTTTTTGTTTGAAAA+TGG | - | tig0015628:26606-26625 | Msa1356400:intron | 10.0% |
| !!! | AAATTTATTTTCAGATTTTT+CGG | + | tig0015628:27456-27475 | None:intergenic | 10.0% |
| !!! | TCACATTTTTTTAAATTTTT+CGG | - | tig0015628:27265-27284 | Msa1356400:intron | 10.0% |
| !!! | AAAAAAAATTGAAAATTTTC+GGG | + | tig0015628:27357-27376 | None:intergenic | 10.0% |
| !!! | AAATTTATTTTCAGATTTTT+TGG | - | tig0015628:27456-27475 | Msa1356400:intron | 10.0% |
| !!! | TTATAATTTTCAGATTTTTT+CGG | - | tig0015628:27486-27505 | Msa1356400:intron | 10.0% |
| !!! | AAATTTATTTTCAGATTTTT+CGG | - | tig0015628:27456-27475 | Msa1356400:intron | 10.0% |
| !!! | TATAATTTTCAGAATTTTTT+CGG | - | tig0015628:27558-27577 | Msa1356400:intron | 10.0% |
| !!! | AAAAAAATTTTGTTTGAAAA+TGG | + | tig0015628:27777-27796 | None:intergenic | 10.0% |
| !! | TATCAATTATCATAAAATAA+TGG | + | tig0015628:27885-27904 | None:intergenic | 10.0% |
| !! | AACTTCATATATAATATATA+GGG | + | tig0015628:28539-28558 | None:intergenic | 10.0% |
| !! | TAACTTCATATATAATATAT+AGG | + | tig0015628:28540-28559 | None:intergenic | 10.0% |
| !!! | TTGTTTTTTTTTTTTTTTTG+AGG | + | tig0015628:28723-28742 | None:intergenic | 10.0% |
| !! | ATAATACTGAATTTATTTAA+TGG | + | tig0015628:30119-30138 | None:intergenic | 10.0% |
| !!! | ATCAAACTAAAATTAATTTT+AGG | - | tig0015628:31684-31703 | Msa1356400:intron | 10.0% |
| !!! | TAATTTAACTCTTTTTCAAA+TGG | - | tig0015628:24751-24770 | Msa1356400:intron | 15.0% |
| !! | ATTATGAATCATAATTATTG+TGG | - | tig0015628:25645-25664 | Msa1356400:intron | 15.0% |
| !! | TTCTTAAAGATCATAATTAA+TGG | + | tig0015628:25687-25706 | None:intergenic | 15.0% |
| !!! | TATCATTAATAACAAACTTT+TGG | + | tig0015628:26440-26459 | None:intergenic | 15.0% |
| !!! | CAAACAAAAAAAATTTTACA+GGG | + | tig0015628:26602-26621 | None:intergenic | 15.0% |
| !!! | TCAAACAAAAAAAATTTTAC+AGG | + | tig0015628:26603-26622 | None:intergenic | 15.0% |
| !!! | AAATTTATTTTGGGATTTTT+CGG | + | tig0015628:26839-26858 | None:intergenic | 15.0% |
| !!! | TCAAACAAAATTTTTTTTAC+AGG | - | tig0015628:27780-27799 | Msa1356400:intron | 15.0% |
| !!! | CAAACAAAATTTTTTTTACA+GGG | - | tig0015628:27781-27800 | Msa1356400:intron | 15.0% |
| !!! | ATTCAAACTTTTTTTTTTAC+AGG | - | tig0015628:27809-27828 | Msa1356400:intron | 15.0% |
| !!! | TTCAAACTTTTTTTTTTACA+GGG | - | tig0015628:27810-27829 | Msa1356400:intron | 15.0% |
| !! | AATGAAATTAAAAAGTGAAA+GGG | + | tig0015628:28005-28024 | None:intergenic | 15.0% |
| !! | AAATGAAATTAAAAAGTGAA+AGG | + | tig0015628:28006-28025 | None:intergenic | 15.0% |
| !! | AATGAAATTAAAAAGTGAAA+GGG | + | tig0015628:28005-28024 | None:intergenic | 15.0% |
| !! | AAATGAAATTAAAAAGTGAA+AGG | + | tig0015628:28006-28025 | None:intergenic | 15.0% |
| !! | AATGAAATTAAAAAGTGAAA+GGG | + | tig0015628:28005-28024 | None:intergenic | 15.0% |
| !! | AAATGAAATTAAAAAGTGAA+AGG | + | tig0015628:28006-28025 | None:intergenic | 15.0% |
| !! | ACTTCATATATAATATATAG+GGG | + | tig0015628:28538-28557 | None:intergenic | 15.0% |
| !! | AAGGAATAAAAAATAAGAAT+TGG | - | tig0015628:29722-29741 | Msa1356400:intron | 15.0% |
| !! | AGGAATAAAAAATAAGAATT+GGG | - | tig0015628:29723-29742 | Msa1356400:intron | 15.0% |
| !!! | TGCTATTTATAATATATGTA+TGG | - | tig0015628:30646-30665 | Msa1356400:intron | 15.0% |
| !! | TATAAATTACCAAAAAAGTA+AGG | + | tig0015628:30857-30876 | None:intergenic | 15.0% |
| !! | AAAAAAAATATGCATATTGT+GGG | + | tig0015628:31384-31403 | None:intergenic | 15.0% |
| !! | AAAAAAAAATATGCATATTG+TGG | + | tig0015628:31385-31404 | None:intergenic | 15.0% |
| !!! | TTGCTGTTTAATATAAATTT+TGG | - | tig0015628:31543-31562 | Msa1356400:intron | 15.0% |
| !!! | TGCTGTTTAATATAAATTTT+GGG | - | tig0015628:31544-31563 | Msa1356400:intron | 15.0% |
| !! | TAATTATTCAACATCATCTA+CGG | - | tig0015628:24057-24076 | Msa1356400:intron | 20.0% |
| !! | ACCTATAATAGAAAAAATGA+TGG | - | tig0015628:24835-24854 | Msa1356400:intron | 20.0% |
| !!! | TCCATCATTTTTTCTATTAT+AGG | + | tig0015628:24839-24858 | None:intergenic | 20.0% |
| !!! | TTTCTCTAAAAAGTTTTTCT+AGG | + | tig0015628:24967-24986 | None:intergenic | 20.0% |
| !! | TGTTGTTGCTAATAAAATTT+AGG | - | tig0015628:25104-25123 | Msa1356400:intron | 20.0% |
| !! | GTTGTTGCTAATAAAATTTA+GGG | - | tig0015628:25105-25124 | Msa1356400:intron | 20.0% |
| !! | AAAACCATTATTCTTAACAA+AGG | - | tig0015628:25491-25510 | Msa1356400:intron | 20.0% |
| !!! | TTCTTATTATTCAAGTTTAG+AGG | - | tig0015628:25799-25818 | Msa1356400:intron | 20.0% |
| !!! | TCTTATTATTCAAGTTTAGA+GGG | - | tig0015628:25800-25819 | Msa1356400:intron | 20.0% |
| !! | CTGAAATATAAAAACCAAAA+CGG | + | tig0015628:26328-26347 | None:intergenic | 20.0% |
| !! | TAATGATACTATAAAAGTGA+AGG | - | tig0015628:26452-26471 | Msa1356400:intron | 20.0% |
| !!! | AAATCGAATTGGATTATTTT+AGG | - | tig0015628:26498-26517 | Msa1356400:intron | 20.0% |
| !!! | TTCAAACTTTTTTTTTGACA+GGG | + | tig0015628:26573-26592 | None:intergenic | 20.0% |
| !!! | ATTCAAACTTTTTTTTTGAC+AGG | + | tig0015628:26574-26593 | None:intergenic | 20.0% |
| !! | TATGATAATTGATATTACGA+TGG | - | tig0015628:27891-27910 | Msa1356400:intron | 20.0% |
| !! | ATGAAATTAAAAAGTGAAAG+GGG | + | tig0015628:28004-28023 | None:intergenic | 20.0% |
| !!! | TGTTTTTCCTTTCTAAAAAA+AGG | + | tig0015628:28038-28057 | None:intergenic | 20.0% |
| !!! | CCATAAAATGTTATTTTGAT+CGG | - | tig0015628:28102-28121 | Msa1356400:intron | 20.0% |
| !! | ATGAAATTAAAAAGTGAAAG+GGG | + | tig0015628:28004-28023 | None:intergenic | 20.0% |
| !!! | CCATAAAATGTTATTTTGAT+CGG | - | tig0015628:28102-28121 | Msa1356400:intron | 20.0% |
| !! | ATGAAATTAAAAAGTGAAAG+GGG | + | tig0015628:28004-28023 | None:intergenic | 20.0% |
| !! | AAAAAATCATAGAAACCAAA+AGG | + | tig0015628:28429-28448 | None:intergenic | 20.0% |
| !! | CTTCATATATAATATATAGG+GGG | + | tig0015628:28537-28556 | None:intergenic | 20.0% |
| !! | GTTCTATCAAAAATCATATT+TGG | + | tig0015628:28967-28986 | None:intergenic | 20.0% |
| !! | TAGAAATACAATAAAAGAGA+AGG | + | tig0015628:29868-29887 | None:intergenic | 20.0% |
| !!! | TTTATTTAATTAGTCTCTGA+AGG | + | tig0015628:29924-29943 | None:intergenic | 20.0% |
| !! | TTCAGAGACTAATTAAATAA+AGG | - | tig0015628:29923-29942 | Msa1356400:intron | 20.0% |
| !!! | AAGACAAAATTTCTTTTTGT+GGG | - | tig0015628:30055-30074 | Msa1356400:intron | 20.0% |
| !! | ATCATCTATGTATAGTTATA+TGG | - | tig0015628:30576-30595 | Msa1356400:intron | 20.0% |
| !!! | ATATTATAAATAGCACGTTT+TGG | + | tig0015628:30641-30660 | None:intergenic | 20.0% |
| !! | GAATGAGCAAATAAAAAAAT+CGG | + | tig0015628:30708-30727 | None:intergenic | 20.0% |
| !! | AAACTATAAGAGAAACTATT+AGG | + | tig0015628:31216-31235 | None:intergenic | 20.0% |
| !! | AAAAAAATATGCATATTGTG+GGG | + | tig0015628:31383-31402 | None:intergenic | 20.0% |
| !!! | TTTCTGTTCAATTTATGTTT+TGG | - | tig0015628:31614-31633 | Msa1356400:intron | 20.0% |
| !!! | TTCTGTTCAATTTATGTTTT+GGG | - | tig0015628:31615-31634 | Msa1356400:intron | 20.0% |
| !! | AGAATTGAAGAATAAAAATG+TGG | - | tig0015628:31948-31967 | Msa1356400:CDS | 20.0% |
| !!! | CTGTTAATTGATTTTTACTA+TGG | - | tig0015628:32019-32038 | Msa1356400:intron | 20.0% |
| !! | AGTCATTAAATATAATGAGT+TGG | + | tig0015628:32248-32267 | None:intergenic | 20.0% |
| ! | AGATGATGTTGAATAATTAG+CGG | + | tig0015628:24056-24075 | None:intergenic | 25.0% |
| ! | AAATGACATCTTTCAACATT+TGG | - | tig0015628:24330-24349 | Msa1356400:three_prime_UTR | 25.0% |
| ! | TCTAACTTAAACCTATGATT+TGG | - | tig0015628:24776-24795 | Msa1356400:intron | 25.0% |
| !! | TAGTTTATGATAGAGCATTA+TGG | - | tig0015628:25029-25048 | Msa1356400:intron | 25.0% |
| !! | TTGCTAATAAAATTTAGGGT+GGG | - | tig0015628:25109-25128 | Msa1356400:intron | 25.0% |
| ! | AGTTCCTTTGTTAAGAATAA+TGG | + | tig0015628:25498-25517 | None:intergenic | 25.0% |
| ! | AATTCTTAAATCTCAGGTAT+TGG | - | tig0015628:25551-25570 | Msa1356400:intron | 25.0% |
| ! | CATAATTTCATATACTTGCA+TGG | + | tig0015628:25631-25650 | None:intergenic | 25.0% |
| ! | TAGAATGAATGATTGCTTAT+CGG | - | tig0015628:25756-25775 | Msa1356400:CDS | 25.0% |
| !! | CTTATTATTCAAGTTTAGAG+GGG | - | tig0015628:25801-25820 | Msa1356400:intron | 25.0% |
| !!! | TATATTCTGTTTCTACAATG+TGG | + | tig0015628:26289-26308 | None:intergenic | 25.0% |
| !!! | CGTTTTGGTTTTTATATTTC+AGG | - | tig0015628:26326-26345 | Msa1356400:intron | 25.0% |
| !!! | GCCATTATTGTTATTTTGAT+CGG | - | tig0015628:27926-27945 | Msa1356400:intron | 25.0% |
| ! | AATAAAATTCTACCAATGCT+TGG | - | tig0015628:27956-27975 | Msa1356400:intron | 25.0% |
| ! | ATAAAATTCTACCAATGCTT+GGG | - | tig0015628:27957-27976 | Msa1356400:intron | 25.0% |
| ! | TGAAAAAATCATAGAAACCA+AGG | + | tig0015628:28076-28095 | None:intergenic | 25.0% |
| !! | CCGATCAAAATAACATTTTA+TGG | + | tig0015628:28105-28124 | None:intergenic | 25.0% |
| ! | AATAAAATTCTACCAATGCT+TGG | - | tig0015628:27956-27975 | Msa1356400:intron | 25.0% |
| ! | ATAAAATTCTACCAATGCTT+GGG | - | tig0015628:27957-27976 | Msa1356400:intron | 25.0% |
| !!! | ACTCTTCCTTTTTTTAGAAA+GGG | - | tig0015628:28029-28048 | Msa1356400:intron | 25.0% |
| !!! | TGTTTTCCCTTTCTAAAAAA+AGG | + | tig0015628:28214-28233 | None:intergenic | 25.0% |
| ! | GAAAAAAATCATAGAAACCA+AGG | + | tig0015628:28252-28271 | None:intergenic | 25.0% |
| !! | CCGATCAAAATAACATTTTA+TGG | + | tig0015628:28105-28124 | None:intergenic | 25.0% |
| ! | AATAAAATTCTACCAATGCT+TGG | - | tig0015628:27956-27975 | Msa1356400:intron | 25.0% |
| ! | ATAAAATTCTACCAATGCTT+GGG | - | tig0015628:27957-27976 | Msa1356400:intron | 25.0% |
| !!! | ACTCTTCCTTTTTTTAGAAA+GGG | - | tig0015628:28029-28048 | Msa1356400:intron | 25.0% |
| !!! | TGTTTTCCCTTTCTAAAAAA+AGG | + | tig0015628:28214-28233 | None:intergenic | 25.0% |
| !! | TCTGTGTTTTATCTCTATTT+CGG | + | tig0015628:28563-28582 | None:intergenic | 25.0% |
| ! | CAAGTCTTTGATTAAAGAAA+GGG | - | tig0015628:28600-28619 | Msa1356400:intron | 25.0% |
| ! | AACAACCTTGTATATTCATA+AGG | + | tig0015628:28635-28654 | None:intergenic | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | tig0015628:28797-28816 | Msa1356400:intron | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | tig0015628:28927-28946 | Msa1356400:intron | 25.0% |
| !! | TGATTTTTGATAGAACACTA+TGG | - | tig0015628:28971-28990 | Msa1356400:intron | 25.0% |
| ! | ATGGATTTATTAAGTCCAAA+TGG | - | tig0015628:29123-29142 | Msa1356400:intron | 25.0% |
| ! | CAAGTTTCATTAAGATGATT+AGG | + | tig0015628:29287-29306 | None:intergenic | 25.0% |
| ! | AATGTAAACCTATCAGTATT+AGG | - | tig0015628:29332-29351 | Msa1356400:intron | 25.0% |
| ! | TTATAAATACCACAGAAAAC+AGG | + | tig0015628:29359-29378 | None:intergenic | 25.0% |
| ! | TTTGTTCCAGTTACATTATT+CGG | - | tig0015628:29571-29590 | Msa1356400:intron | 25.0% |
| !! | TTTTATCCATAATCCATGTA+AGG | + | tig0015628:29608-29627 | None:intergenic | 25.0% |
| !!! | GAGAGATTATCATTTTTAGA+TGG | + | tig0015628:29690-29709 | None:intergenic | 25.0% |
| ! | TTTATTCCTTGAATCAGAAA+CGG | + | tig0015628:29712-29731 | None:intergenic | 25.0% |
| ! | ACAATAAAAGAGAAGGAAAA+AGG | + | tig0015628:29861-29880 | None:intergenic | 25.0% |
| ! | TCAACATAGAGATATTTATG+AGG | + | tig0015628:29896-29915 | None:intergenic | 25.0% |
| !! | ATTGTAAAAGTTACTGCTTT+TGG | + | tig0015628:29988-30007 | None:intergenic | 25.0% |
| !! | AAAAGCAGTAACTTTTACAA+TGG | - | tig0015628:29987-30006 | Msa1356400:intron | 25.0% |
| !! | CAAGACAAAATTTCTTTTTG+TGG | - | tig0015628:30054-30073 | Msa1356400:intron | 25.0% |
| !!! | ATCTATATTGCATGTTTTAG+TGG | + | tig0015628:30207-30226 | None:intergenic | 25.0% |
| ! | AAACATGCAATATAGATCTA+TGG | - | tig0015628:30210-30229 | Msa1356400:intron | 25.0% |
| ! | AACATGCAATATAGATCTAT+GGG | - | tig0015628:30211-30230 | Msa1356400:intron | 25.0% |
| !!! | GAAGGTATTAAAATGTCTTA+CGG | - | tig0015628:30275-30294 | Msa1356400:intron | 25.0% |
| ! | AAAAAATTACCTTCATTTGC+TGG | + | tig0015628:30308-30327 | None:intergenic | 25.0% |
| ! | TAACTATACATAGATGATCA+AGG | + | tig0015628:30574-30593 | None:intergenic | 25.0% |
| !!! | ATATTTTCCTACCTTGTTTT+TGG | - | tig0015628:30874-30893 | Msa1356400:intron | 25.0% |
| ! | GTTTCAGTTTATTCTTATGT+TGG | + | tig0015628:30974-30993 | None:intergenic | 25.0% |
| ! | TATAAGAGAAACTATTAGGA+AGG | + | tig0015628:31212-31231 | None:intergenic | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | - | tig0015628:31220-31239 | Msa1356400:intron | 25.0% |
| !!! | TTTATTTTCTTCCTTACTAG+AGG | + | tig0015628:31256-31275 | None:intergenic | 25.0% |
| ! | ATATGTTTACAAGAGAATGA+GGG | + | tig0015628:31488-31507 | None:intergenic | 25.0% |
| ! | TCTCTTGTAAACATATCTTA+TGG | - | tig0015628:31492-31511 | Msa1356400:intron | 25.0% |
| ! | CTCTTGTAAACATATCTTAT+GGG | - | tig0015628:31493-31512 | Msa1356400:intron | 25.0% |
| !! | GAACTTGGAACATAATTTTT+AGG | + | tig0015628:31803-31822 | None:intergenic | 25.0% |
| ! | ATGTTGAAAGATGTCATTTC+TGG | + | tig0015628:24329-24348 | None:intergenic | 30.0% |
| ! | AGCGAGTTGAATAATGAATT+GGG | + | tig0015628:24812-24831 | None:intergenic | 30.0% |
| ! | AAGCGAGTTGAATAATGAAT+TGG | + | tig0015628:24813-24832 | None:intergenic | 30.0% |
| ! | AAATGATGGAAACTAGACTT+AGG | - | tig0015628:24849-24868 | Msa1356400:intron | 30.0% |
| CTATAAATCTTCTCTCTACA+TGG | + | tig0015628:24883-24902 | None:intergenic | 30.0% | |
| ! | GATTTATAGATTTTGCAGCA+AGG | - | tig0015628:24894-24913 | Msa1356400:intron | 30.0% |
| ! | TGTAATTTTATCCATGTAGC+CGG | - | tig0015628:25052-25071 | Msa1356400:intron | 30.0% |
| GTTGCTAATAAAATTTAGGG+TGG | - | tig0015628:25108-25127 | Msa1356400:intron | 30.0% | |
| ! | TAATAAAATTTAGGGTGGGT+GGG | - | tig0015628:25113-25132 | Msa1356400:intron | 30.0% |
| TTTGATTGGATCATGTTTGT+AGG | + | tig0015628:25335-25354 | None:intergenic | 30.0% | |
| TACAAACATGATCCAATCAA+AGG | - | tig0015628:25334-25353 | Msa1356400:intron | 30.0% | |
| TAATCAAATTGGAGAATGTC+AGG | + | tig0015628:25361-25380 | None:intergenic | 30.0% | |
| TGACATTCTCCAATTTGATT+AGG | - | tig0015628:25360-25379 | Msa1356400:intron | 30.0% | |
| TTCTCCAATTTGATTAGGTT+TGG | - | tig0015628:25365-25384 | Msa1356400:intron | 30.0% | |
| TCTCCAATTTGATTAGGTTT+GGG | - | tig0015628:25366-25385 | Msa1356400:intron | 30.0% | |
| ATCTTATCTCTTGAAGTTGA+TGG | - | tig0015628:25402-25421 | Msa1356400:intron | 30.0% | |
| ACGTGAAATTCTTAAATCTC+AGG | - | tig0015628:25545-25564 | Msa1356400:intron | 30.0% | |
| TCGATTAAGAATGTCTTGTA+GGG | - | tig0015628:25906-25925 | Msa1356400:intron | 30.0% | |
| AAGGCATATTCACATATAGA+AGG | + | tig0015628:26065-26084 | None:intergenic | 30.0% | |
| ACTATAGCTCTTATTCATGA+AGG | + | tig0015628:26084-26103 | None:intergenic | 30.0% | |
| TTCATGAATAAGAGCTATAG+TGG | - | tig0015628:26083-26102 | Msa1356400:intron | 30.0% | |
| ATAAACTTGTGTGTGGATTT+AGG | - | tig0015628:26110-26129 | Msa1356400:intron | 30.0% | |
| ! | TTTCATGTGTTGCTAAATAG+TGG | + | tig0015628:26174-26193 | None:intergenic | 30.0% |
| !! | CTTTTTGTTTAAGACCGTTT+TGG | - | tig0015628:26311-26330 | Msa1356400:intron | 30.0% |
| ! | CTTTGAAAATGTTGTGCTTA+TGG | - | tig0015628:26413-26432 | Msa1356400:intron | 30.0% |
| ! | TATAAAAGTGAAGGTATGTG+AGG | - | tig0015628:26461-26480 | Msa1356400:intron | 30.0% |
| CTCTTATCTCTAAATCGAAT+TGG | - | tig0015628:26487-26506 | Msa1356400:intron | 30.0% | |
| GCCGATCAAAATAACAATAA+TGG | + | tig0015628:27930-27949 | None:intergenic | 30.0% | |
| !!! | CACTCTTCCTTTTTTTAGAA+AGG | - | tig0015628:28028-28047 | Msa1356400:intron | 30.0% |
| AAATTAAAAAGTGAAAGGGG+AGG | + | tig0015628:28001-28020 | None:intergenic | 30.0% | |
| !!! | CACTCTTCCTTTTTTTAGAA+AGG | - | tig0015628:28028-28047 | Msa1356400:intron | 30.0% |
| AAATTAAAAAGTGAAAGGGG+AGG | + | tig0015628:28001-28020 | None:intergenic | 30.0% | |
| !!! | CACTCTTCCTTTTTTTAGAA+AGG | - | tig0015628:28028-28047 | Msa1356400:intron | 30.0% |
| CAACCATAAAAGTGAGTATA+TGG | - | tig0015628:28454-28473 | Msa1356400:intron | 30.0% | |
| !! | GAACCATATACTCACTTTTA+TGG | + | tig0015628:28460-28479 | None:intergenic | 30.0% |
| ATATAATATATAGGGGGCAA+GGG | + | tig0015628:28531-28550 | None:intergenic | 30.0% | |
| TATATAATATATAGGGGGCA+AGG | + | tig0015628:28532-28551 | None:intergenic | 30.0% | |
| CCTTTCTTTAATCAAAGACT+TGG | + | tig0015628:28602-28621 | None:intergenic | 30.0% | |
| CCAAGTCTTTGATTAAAGAA+AGG | - | tig0015628:28599-28618 | Msa1356400:intron | 30.0% | |
| AAGGTTGTTAAGACAAGATT+CGG | - | tig0015628:28646-28665 | Msa1356400:intron | 30.0% | |
| ! | CTCTACATTTTCTCTACAAT+TGG | + | tig0015628:28753-28772 | None:intergenic | 30.0% |
| ATTGTAGAGAAAATGTAGAG+AGG | - | tig0015628:28753-28772 | Msa1356400:intron | 30.0% | |
| TTGTAGAGAAAATGTAGAGA+GGG | - | tig0015628:28754-28773 | Msa1356400:intron | 30.0% | |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | tig0015628:28793-28812 | None:intergenic | 30.0% |
| TTGATCTACTCTTCTTACAA+CGG | + | tig0015628:28863-28882 | None:intergenic | 30.0% | |
| TGTAAGAAGAGTAGATCAAA+TGG | - | tig0015628:28864-28883 | Msa1356400:intron | 30.0% | |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | tig0015628:28932-28951 | None:intergenic | 30.0% |
| TGTTGTTGTAGAGAAAATGT+AGG | - | tig0015628:29046-29065 | Msa1356400:intron | 30.0% | |
| TAACTGTGAAGTTAGAAATC+GGG | + | tig0015628:29096-29115 | None:intergenic | 30.0% | |
| CTAACTGTGAAGTTAGAAAT+CGG | + | tig0015628:29097-29116 | None:intergenic | 30.0% | |
| GATTTATTAAGTCCAAATGG+AGG | - | tig0015628:29126-29145 | Msa1356400:intron | 30.0% | |
| ! | AATTATTTGAGACCTCCATT+TGG | + | tig0015628:29141-29160 | None:intergenic | 30.0% |
| TTACACAATAAACCACCTTT+GGG | + | tig0015628:29211-29230 | None:intergenic | 30.0% | |
| TTTACACAATAAACCACCTT+TGG | + | tig0015628:29212-29231 | None:intergenic | 30.0% | |
| TCATCTTAATGAAACTTGTG+AGG | - | tig0015628:29289-29308 | Msa1356400:intron | 30.0% | |
| GACACCAAGTTGTAAAATAA+TGG | + | tig0015628:29446-29465 | None:intergenic | 30.0% | |
| !!! | TTATTTTACAACTTGGTGTC+AGG | - | tig0015628:29446-29465 | Msa1356400:intron | 30.0% |
| GATGTGTTCACGATTAAAAA+AGG | - | tig0015628:29486-29505 | Msa1356400:intron | 30.0% | |
| GAAAAATAGACTGTGAACTT+GGG | - | tig0015628:29508-29527 | Msa1356400:intron | 30.0% | |
| !! | ATTATCATTTTTAGATGGCC+TGG | + | tig0015628:29685-29704 | None:intergenic | 30.0% |
| TTAGAGTAAGCCTTTACAAT+AGG | + | tig0015628:29769-29788 | None:intergenic | 30.0% | |
| AGAAGGCCACAAAATTAAAT+GGG | - | tig0015628:29790-29809 | Msa1356400:intron | 30.0% | |
| ! | AAATGTTAAGAAGTGCACTT+AGG | - | tig0015628:29947-29966 | Msa1356400:intron | 30.0% |
| ! | AATGTTAAGAAGTGCACTTA+GGG | - | tig0015628:29948-29967 | Msa1356400:intron | 30.0% |
| !! | CTTTAAAGTTTGAAGGCTAT+TGG | + | tig0015628:30240-30259 | None:intergenic | 30.0% |
| !! | TGAATGGCTTTAAAGTTTGA+AGG | + | tig0015628:30247-30266 | None:intergenic | 30.0% |
| ! | TTTAAAGCCATTCAGATTCT+AGG | - | tig0015628:30253-30272 | Msa1356400:intron | 30.0% |
| CTCTTGAAATCAAGAAGAAT+GGG | + | tig0015628:30349-30368 | None:intergenic | 30.0% | |
| ACTCTTGAAATCAAGAAGAA+TGG | + | tig0015628:30350-30369 | None:intergenic | 30.0% | |
| CATAATGCTACACATCTAAA+TGG | + | tig0015628:30381-30400 | None:intergenic | 30.0% | |
| CATTTAGATGTGTAGCATTA+TGG | - | tig0015628:30379-30398 | Msa1356400:intron | 30.0% | |
| AGAAAAAGTCACATGACTTT+GGG | + | tig0015628:30498-30517 | None:intergenic | 30.0% | |
| TAGAAAAAGTCACATGACTT+TGG | + | tig0015628:30499-30518 | None:intergenic | 30.0% | |
| AAAGAGACATGAAAGATACT+AGG | + | tig0015628:30735-30754 | None:intergenic | 30.0% | |
| ATAACAAGACTCCAAAAACA+AGG | + | tig0015628:30888-30907 | None:intergenic | 30.0% | |
| GTTTCATTCATCTTGTAAAG+AGG | + | tig0015628:31036-31055 | None:intergenic | 30.0% | |
| ! | TGGTTTTTGATAGAACACTA+TGG | + | tig0015628:31159-31178 | None:intergenic | 30.0% |
| AAATTGTTGGATTGAGTAGT+GGG | + | tig0015628:31325-31344 | None:intergenic | 30.0% | |
| GAAAATAGAGTGGAAATTGT+TGG | + | tig0015628:31338-31357 | None:intergenic | 30.0% | |
| TATGTTTACAAGAGAATGAG+GGG | + | tig0015628:31487-31506 | None:intergenic | 30.0% | |
| GATATGTTTACAAGAGAATG+AGG | + | tig0015628:31489-31508 | None:intergenic | 30.0% | |
| !! | AAATTTTGGGTGTCAACATT+AGG | - | tig0015628:31557-31576 | Msa1356400:intron | 30.0% |
| !!! | GTCATTTTTGTCTTGTCTAA+TGG | + | tig0015628:31757-31776 | None:intergenic | 30.0% |
| TTAGACAAGACAAAAATGAC+AGG | - | tig0015628:31757-31776 | Msa1356400:intron | 30.0% | |
| GTAGAATGAAGATATGATCA+CGG | + | tig0015628:31829-31848 | None:intergenic | 30.0% | |
| ! | ACTATGGACATCTAATTTTC+AGG | - | tig0015628:32035-32054 | Msa1356400:intron | 30.0% |
| AACTTTCCAGGATCAATAAA+TGG | + | tig0015628:32277-32296 | None:intergenic | 30.0% | |
| TTGCTCTTGTAAAACTTCAA+AGG | - | tig0015628:32324-32343 | Msa1356400:CDS | 30.0% | |
| TGATGTTGAATAATTAGCGG+CGG | + | tig0015628:24053-24072 | None:intergenic | 35.0% | |
| GTTGAAATGAATCAATTGCC+AGG | - | tig0015628:24494-24513 | Msa1356400:intron | 35.0% | |
| CAAGATTCAATTTCATCTCC+TGG | + | tig0015628:24515-24534 | None:intergenic | 35.0% | |
| CTTGAACATCCAAAGATCAA+TGG | - | tig0015628:24531-24550 | Msa1356400:intron | 35.0% | |
| GTAGTTTCTCCATTGATCTT+TGG | + | tig0015628:24543-24562 | None:intergenic | 35.0% | |
| !! | TTCAGTGATAGCGTTTTGAA+CGG | + | tig0015628:24565-24584 | None:intergenic | 35.0% |
| GTAGATACAAGACCATTAGA+TGG | + | tig0015628:24645-24664 | None:intergenic | 35.0% | |
| ! | CGAGTTGAATAATGAATTGG+GGG | + | tig0015628:24810-24829 | None:intergenic | 35.0% |
| ! | GCGAGTTGAATAATGAATTG+GGG | + | tig0015628:24811-24830 | None:intergenic | 35.0% |
| AGATCTAGAGATTAACGAGT+TGG | - | tig0015628:24997-25016 | Msa1356400:intron | 35.0% | |
| ! | CTAATAAAATTTAGGGTGGG+TGG | - | tig0015628:25112-25131 | Msa1356400:intron | 35.0% |
| TGTAGGAGTTGCATAGAATT+TGG | + | tig0015628:25318-25337 | None:intergenic | 35.0% | |
| !! | TTATCTCTTGAAGTTGATGG+TGG | - | tig0015628:25405-25424 | Msa1356400:intron | 35.0% |
| AACAAAGGAACTTGTGTCTT+TGG | - | tig0015628:25506-25525 | Msa1356400:intron | 35.0% | |
| ATTATTGTGGTCATGTGCTT+AGG | - | tig0015628:25658-25677 | Msa1356400:intron | 35.0% | |
| ATTGGATGAAACTATGGTGA+AGG | + | tig0015628:25883-25902 | None:intergenic | 35.0% | |
| GACATTCTTAATCGACACAT+TGG | + | tig0015628:25901-25920 | None:intergenic | 35.0% | |
| GTCGATTAAGAATGTCTTGT+AGG | - | tig0015628:25905-25924 | Msa1356400:intron | 35.0% | |
| CCTTGTCAGTCAAAGTATAT+TGG | + | tig0015628:25968-25987 | None:intergenic | 35.0% | |
| CCAATATACTTTGACTGACA+AGG | - | tig0015628:25965-25984 | Msa1356400:intron | 35.0% | |
| TTCACATATAGAAGGCAAAG+AGG | + | tig0015628:26057-26076 | None:intergenic | 35.0% | |
| TGGCTATATAAACTTGTGTG+TGG | - | tig0015628:26103-26122 | Msa1356400:intron | 35.0% | |
| CTACAATGTGGTAAAGAAAG+TGG | + | tig0015628:26277-26296 | None:intergenic | 35.0% | |
| ! | GATTTTCGTCCCTGTAATAT+AGG | - | tig0015628:26530-26549 | Msa1356400:intron | 35.0% |
| !! | TTTTGTTTGAAAATGGTCCC+TGG | - | tig0015628:26613-26632 | Msa1356400:intron | 35.0% |
| TTTGTTTGAAAATGGTCCCT+GGG | - | tig0015628:26614-26633 | Msa1356400:intron | 35.0% | |
| TTTGTTTGAAAATGGTCCCT+GGG | + | tig0015628:26614-26633 | None:intergenic | 35.0% | |
| !! | TTTTGTTTGAAAATGGTCCC+TGG | + | tig0015628:26613-26632 | None:intergenic | 35.0% |
| TCAAAACACGCCTATATTAC+AGG | - | tig0015628:27840-27859 | Msa1356400:intron | 35.0% | |
| CAAAACACGCCTATATTACA+GGG | - | tig0015628:27841-27860 | Msa1356400:intron | 35.0% | |
| GAATTTCGTCCCTGTAATAT+AGG | + | tig0015628:27853-27872 | None:intergenic | 35.0% | |
| ACGTGCCTTATGAATATACA+AGG | - | tig0015628:28627-28646 | Msa1356400:intron | 35.0% | |
| AGGTTGTTAAGACAAGATTC+GGG | - | tig0015628:28647-28666 | Msa1356400:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | tig0015628:28786-28805 | Msa1356400:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | tig0015628:28806-28825 | Msa1356400:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | tig0015628:28811-28830 | Msa1356400:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | tig0015628:28867-28886 | Msa1356400:intron | 35.0% | |
| ! | TCTTTTCTAATGGTTTCTCG+AGG | + | tig0015628:28922-28941 | None:intergenic | 35.0% |
| AGATTTAGAGGTCAATGAGT+TGG | - | tig0015628:28939-28958 | Msa1356400:intron | 35.0% | |
| ! | TAGGTTTTGCTTCTATGTTC+TGG | - | tig0015628:29065-29084 | Msa1356400:intron | 35.0% |
| CGATTTCTAACTTCACAGTT+AGG | - | tig0015628:29095-29114 | Msa1356400:intron | 35.0% | |
| ! | ACTTCACAGTTAGGCTTTAA+TGG | - | tig0015628:29104-29123 | Msa1356400:intron | 35.0% |
| GTAGTTTCACTCAAGTGTAA+TGG | - | tig0015628:29246-29265 | Msa1356400:intron | 35.0% | |
| AAACAGGTCCTAATACTGAT+AGG | + | tig0015628:29343-29362 | None:intergenic | 35.0% | |
| ATATCGGTGCAATCTACAAA+AGG | + | tig0015628:29383-29402 | None:intergenic | 35.0% | |
| GGAAAAATAGACTGTGAACT+TGG | - | tig0015628:29507-29526 | Msa1356400:intron | 35.0% | |
| !! | TTCTTACTTTGAAACACCAC+AGG | - | tig0015628:29545-29564 | Msa1356400:intron | 35.0% |
| CATAATCCATGTAAGGAAGT+AGG | + | tig0015628:29601-29620 | None:intergenic | 35.0% | |
| ! | CTACTTCCTTACATGGATTA+TGG | - | tig0015628:29599-29618 | Msa1356400:intron | 35.0% |
| !! | ATTTTTAGATGGCCTGGATT+AGG | + | tig0015628:29679-29698 | None:intergenic | 35.0% |
| TTCTAGACCTCCTATTGTAA+AGG | - | tig0015628:29756-29775 | Msa1356400:intron | 35.0% | |
| ! | TAAAGGCTTACTCTAAGAGA+AGG | - | tig0015628:29773-29792 | Msa1356400:intron | 35.0% |
| GAGAAGGCCACAAAATTAAA+TGG | - | tig0015628:29789-29808 | Msa1356400:intron | 35.0% | |
| !! | CCTATGCCCATTTAATTTTG+TGG | + | tig0015628:29799-29818 | None:intergenic | 35.0% |
| CCACAAAATTAAATGGGCAT+AGG | - | tig0015628:29796-29815 | Msa1356400:intron | 35.0% | |
| TTCCTTAAACAATGCCCTTA+GGG | - | tig0015628:30078-30097 | Msa1356400:CDS | 35.0% | |
| ATACCTTCCTAGAATCTGAA+TGG | + | tig0015628:30263-30282 | None:intergenic | 35.0% | |
| AATGCTACACATCTAAATGG+TGG | + | tig0015628:30378-30397 | None:intergenic | 35.0% | |
| ! | TTTTGGATATGTGTGTCTTG+TGG | + | tig0015628:30624-30643 | None:intergenic | 35.0% |
| ! | TATTGTGAAGTATCCATCGA+AGG | - | tig0015628:30680-30699 | Msa1356400:intron | 35.0% |
| TATCTTTCATGTCTCTTTGC+AGG | - | tig0015628:30737-30756 | Msa1356400:intron | 35.0% | |
| GATAATCTATCCAAAGAGGT+GGG | - | tig0015628:30768-30787 | Msa1356400:intron | 35.0% | |
| !!! | AAGGTGAGACCTTACTTTTT+TGG | - | tig0015628:30845-30864 | Msa1356400:intron | 35.0% |
| !! | TGTATTGATGATGAACTCAG+TGG | - | tig0015628:31004-31023 | Msa1356400:CDS | 35.0% |
| ! | AAATGAGTTGGAGAAAGACA+TGG | + | tig0015628:31179-31198 | None:intergenic | 35.0% |
| TCTCCAACTCATTTATCTCT+AGG | - | tig0015628:31185-31204 | Msa1356400:intron | 35.0% | |
| TTTCTTCCTTACTAGAGGTA+GGG | + | tig0015628:31251-31270 | None:intergenic | 35.0% | |
| ! | TTTTCTTCCTTACTAGAGGT+AGG | + | tig0015628:31252-31271 | None:intergenic | 35.0% |
| ! | GGAATTTTCATCTCATTAGG+GGG | + | tig0015628:31301-31320 | None:intergenic | 35.0% |
| ! | GGGAATTTTCATCTCATTAG+GGG | + | tig0015628:31302-31321 | None:intergenic | 35.0% |
| ! | GGGGAATTTTCATCTCATTA+GGG | + | tig0015628:31303-31322 | None:intergenic | 35.0% |
| AATTGTTGGATTGAGTAGTG+GGG | + | tig0015628:31324-31343 | None:intergenic | 35.0% | |
| GAAATTGTTGGATTGAGTAG+TGG | + | tig0015628:31326-31345 | None:intergenic | 35.0% | |
| GGAGTAGAATGAAAATAGAG+TGG | + | tig0015628:31348-31367 | None:intergenic | 35.0% | |
| AGACAGGTTTAGATTGGAAA+GGG | + | tig0015628:31434-31453 | None:intergenic | 35.0% | |
| TAGACAGGTTTAGATTGGAA+AGG | + | tig0015628:31435-31454 | None:intergenic | 35.0% | |
| ! | TAATAGAAAGCACAGTAGAC+AGG | + | tig0015628:31450-31469 | None:intergenic | 35.0% |
| GTCTACTGTGCTTTCTATTA+TGG | - | tig0015628:31450-31469 | Msa1356400:intron | 35.0% | |
| ATGTTTACAAGAGAATGAGG+GGG | + | tig0015628:31486-31505 | None:intergenic | 35.0% | |
| TTTAGGTATCTCTAGCAATG+TGG | - | tig0015628:31701-31720 | Msa1356400:intron | 35.0% | |
| AATGAAGATATGATCACGGA+AGG | + | tig0015628:31825-31844 | None:intergenic | 35.0% | |
| TTCCAAGTTCCTTTCTTGAT+TGG | - | tig0015628:31886-31905 | Msa1356400:CDS | 35.0% | |
| AGGATATTGCCAATCAAGAA+AGG | + | tig0015628:31898-31917 | None:intergenic | 35.0% | |
| GCACTGAATCACCTTAAATT+AGG | + | tig0015628:32098-32117 | None:intergenic | 35.0% | |
| AAGGTGATTCAGTGCAATAA+TGG | - | tig0015628:32103-32122 | Msa1356400:intron | 35.0% | |
| TTGCTCAGTAGCCTAATTTA+AGG | - | tig0015628:32157-32176 | Msa1356400:CDS | 35.0% | |
| GCACTGAATCACCTTAAATT+AGG | + | tig0015628:32098-32117 | None:intergenic | 35.0% | |
| AAGGTGATTCAGTGCAATAA+TGG | - | tig0015628:32103-32122 | Msa1356400:intron | 35.0% | |
| GAGATAATGTTTGTTTCGAG+AGG | - | tig0015628:32212-32231 | Msa1356400:CDS | 35.0% | |
| ! | ATTGATCCTGGAAAGTTTTG+AGG | - | tig0015628:32280-32299 | Msa1356400:CDS | 35.0% |
| ATTGTACCTCAAAACTTTCC+AGG | + | tig0015628:32289-32308 | None:intergenic | 35.0% | |
| TTTCTGTTAGTGTGTACTAG+TGG | - | tig0015628:32347-32366 | Msa1356400:CDS | 35.0% | |
| TTCTGTTAGTGTGTACTAGT+GGG | - | tig0015628:32348-32367 | Msa1356400:CDS | 35.0% | |
| AATAAGCTCGTTATCCTTTC+AGG | - | tig0015628:32516-32535 | Msa1356400:CDS | 35.0% | |
| ATAAGCTCGTTATCCTTTCA+GGG | - | tig0015628:32517-32536 | Msa1356400:CDS | 35.0% | |
| ATTTCGTAGGAGAAAACTGA+AGG | - | tig0015628:32543-32562 | Msa1356400:five_prime_UTR | 35.0% | |
| TTTCGTAGGAGAAAACTGAA+GGG | - | tig0015628:32544-32563 | Msa1356400:five_prime_UTR | 35.0% | |
| AGCTGCTTCTAAATCCCAAT+TGG | + | tig0015628:24167-24186 | None:intergenic | 40.0% | |
| TCAGAAGGAACTCAGAAAGA+AGG | - | tig0015628:24186-24205 | Msa1356400:intron | 40.0% | |
| CAGAAGGAACTCAGAAAGAA+GGG | - | tig0015628:24187-24206 | Msa1356400:intron | 40.0% | |
| !! | CGCTAATCAAGCTTTGTTGT+TGG | - | tig0015628:24363-24382 | Msa1356400:three_prime_UTR | 40.0% |
| ACCAACTCTTCCTTTCACTT+TGG | - | tig0015628:24388-24407 | Msa1356400:three_prime_UTR | 40.0% | |
| ACCAAAGTGAAAGGAAGAGT+TGG | + | tig0015628:24392-24411 | None:intergenic | 40.0% | |
| TGAGTTACCTCTAACGATTG+AGG | + | tig0015628:24415-24434 | None:intergenic | 40.0% | |
| TCAATCGTTAGAGGTAACTC+AGG | - | tig0015628:24414-24433 | Msa1356400:three_prime_UTR | 40.0% | |
| GAGAATGTGAAGCTAAGAAG+AGG | - | tig0015628:24603-24622 | Msa1356400:intron | 40.0% | |
| AGTTTGAGCAGTTAGTTACC+AGG | + | tig0015628:24690-24709 | None:intergenic | 40.0% | |
| TGATGGAAACTAGACTTAGG+TGG | - | tig0015628:24852-24871 | Msa1356400:intron | 40.0% | |
| ! | AAGTCTTATCCCACTAAGTG+AGG | + | tig0015628:25078-25097 | None:intergenic | 40.0% |
| TCACTTAGTGGGATAAGACT+TGG | - | tig0015628:25077-25096 | Msa1356400:intron | 40.0% | |
| AGAATGTCAGGACCTTTGAT+TGG | + | tig0015628:25349-25368 | None:intergenic | 40.0% | |
| CGACCCAAACCTAATCAAAT+TGG | + | tig0015628:25372-25391 | None:intergenic | 40.0% | |
| TCAACGTGTTGGATCAGAAT+TGG | - | tig0015628:25449-25468 | Msa1356400:intron | 40.0% | |
| ATGGTGAAGGCAGTTAAAGA+AGG | + | tig0015628:25870-25889 | None:intergenic | 40.0% | |
| CGACACATTGGATGAAACTA+TGG | + | tig0015628:25889-25908 | None:intergenic | 40.0% | |
| !! | TGTCTTGTAGGGTTTTTGAG+TGG | - | tig0015628:25917-25936 | Msa1356400:intron | 40.0% |
| !!! | GTCTTGTAGGGTTTTTGAGT+GGG | - | tig0015628:25918-25937 | Msa1356400:intron | 40.0% |
| ! | TGACAAGGTTTTGCTCAGTT+TGG | - | tig0015628:25980-25999 | Msa1356400:intron | 40.0% |
| TGGTAAAGAAAGTGGCACTT+CGG | + | tig0015628:26269-26288 | None:intergenic | 40.0% | |
| ACCTTCAACCATTCTGTCTA+TGG | + | tig0015628:26379-26398 | None:intergenic | 40.0% | |
| CAAAACGCGCCTATATTACA+GGG | + | tig0015628:26542-26561 | None:intergenic | 40.0% | |
| TCAAAACGCGCCTATATTAC+AGG | + | tig0015628:26543-26562 | None:intergenic | 40.0% | |
| AATTCTACCAATGCTTGGGT+TGG | - | tig0015628:27961-27980 | Msa1356400:intron | 40.0% | |
| AATTCTACCAATGCTTGGGT+TGG | - | tig0015628:27961-27980 | Msa1356400:intron | 40.0% | |
| AATTCTACCAATGCTTGGGT+TGG | - | tig0015628:27961-27980 | Msa1356400:intron | 40.0% | |
| !! | AACCAAAAGGTATCACGTCA+TGG | + | tig0015628:28416-28435 | None:intergenic | 40.0% |
| GTGAGTATATGGTTCGCTAA+TGG | - | tig0015628:28465-28484 | Msa1356400:intron | 40.0% | |
| AGAAAATGTAGAGAGGGAGT+GGG | - | tig0015628:28760-28779 | Msa1356400:intron | 40.0% | |
| TCTTCTTACAACGGCATCTA+CGG | + | tig0015628:28854-28873 | None:intergenic | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | tig0015628:28892-28911 | Msa1356400:intron | 40.0% | |
| !! | TGAAACTTGTGAGGAGTATC+AGG | - | tig0015628:29298-29317 | Msa1356400:intron | 40.0% |
| ! | GTATTAGGACCTGTTTTCTG+TGG | - | tig0015628:29347-29366 | Msa1356400:intron | 40.0% |
| TAACTGGAACAAATTGCCTG+TGG | + | tig0015628:29564-29583 | None:intergenic | 40.0% | |
| GGACTTCCGAATAATGTAAC+TGG | + | tig0015628:29580-29599 | None:intergenic | 40.0% | |
| GATTAGGCTCATGTGAGTAT+AGG | + | tig0015628:29663-29682 | None:intergenic | 40.0% | |
| ATCTCTCCGTTTCTGATTCA+AGG | - | tig0015628:29703-29722 | Msa1356400:intron | 40.0% | |
| GAGTAAGCCTTTACAATAGG+AGG | + | tig0015628:29766-29785 | None:intergenic | 40.0% | |
| AAGAGAAGGAAAAAGGTAGC+TGG | + | tig0015628:29854-29873 | None:intergenic | 40.0% | |
| GTTCCTTAAACAATGCCCTT+AGG | - | tig0015628:30077-30096 | Msa1356400:CDS | 40.0% | |
| CTTAGATTCACAGCAAACAC+AGG | + | tig0015628:30168-30187 | None:intergenic | 40.0% | |
| ! | AAGCCATTCAGATTCTAGGA+AGG | - | tig0015628:30257-30276 | Msa1356400:intron | 40.0% |
| ! | AAAAAAATCGGCTCCTTCGA+TGG | + | tig0015628:30696-30715 | None:intergenic | 40.0% |
| GCTGGATAATCTATCCAAAG+AGG | - | tig0015628:30764-30783 | Msa1356400:intron | 40.0% | |
| GGATAATCTATCCAAAGAGG+TGG | - | tig0015628:30767-30786 | Msa1356400:intron | 40.0% | |
| GAGAAAGCTTACAACCCTTA+CGG | + | tig0015628:30799-30818 | None:intergenic | 40.0% | |
| GGTTGTAAGCTTTCTCAGAA+TGG | - | tig0015628:30803-30822 | Msa1356400:intron | 40.0% | |
| AGCTTTCTCAGAATGGAAGT+TGG | - | tig0015628:30810-30829 | Msa1356400:intron | 40.0% | |
| GCTTTCTCAGAATGGAAGTT+GGG | - | tig0015628:30811-30830 | Msa1356400:intron | 40.0% | |
| CTTTCTCAGAATGGAAGTTG+GGG | - | tig0015628:30812-30831 | Msa1356400:intron | 40.0% | |
| CAAGACTCCAAAAACAAGGT+AGG | + | tig0015628:30884-30903 | None:intergenic | 40.0% | |
| TACCACACTGTCATTGAACT+TGG | - | tig0015628:30912-30931 | Msa1356400:intron | 40.0% | |
| GAAACAGTAGTGACAGACAA+TGG | - | tig0015628:31051-31070 | Msa1356400:CDS | 40.0% | |
| !! | CGGTTGTTGTTGTTGTTTCA+AGG | + | tig0015628:31091-31110 | None:intergenic | 40.0% |
| GGACCTAGAGATAAATGAGT+TGG | + | tig0015628:31191-31210 | None:intergenic | 40.0% | |
| TTCTTCCTTACTAGAGGTAG+GGG | + | tig0015628:31250-31269 | None:intergenic | 40.0% | |
| ! | GGGGGAATTTTCATCTCATT+AGG | + | tig0015628:31304-31323 | None:intergenic | 40.0% |
| ATTGTTGGATTGAGTAGTGG+GGG | + | tig0015628:31323-31342 | None:intergenic | 40.0% | |
| ATTGTGGGGAGTAACAGAAA+TGG | + | tig0015628:31369-31388 | None:intergenic | 40.0% | |
| AGGTTTAGATTGGAAAGGGA+AGG | + | tig0015628:31430-31449 | None:intergenic | 40.0% | |
| CACAGTAGACAGGTTTAGAT+TGG | + | tig0015628:31440-31459 | None:intergenic | 40.0% | |
| TAGTTGTCACGGTAGGATTT+GGG | - | tig0015628:31646-31665 | Msa1356400:intron | 40.0% | |
| ATATGATCACGGAAGGAACT+TGG | + | tig0015628:31818-31837 | None:intergenic | 40.0% | |
| TGCCAATCAAGAAAGGAACT+TGG | + | tig0015628:31891-31910 | None:intergenic | 40.0% | |
| GGCAATATCCTATTCCATGA+TGG | - | tig0015628:31907-31926 | Msa1356400:CDS | 40.0% | |
| TCAATTCTCAAGACTTGCGA+GGG | + | tig0015628:31936-31955 | None:intergenic | 40.0% | |
| TTCAATTCTCAAGACTTGCG+AGG | + | tig0015628:31937-31956 | None:intergenic | 40.0% | |
| TGCTCAGGTAGCCTAATTTA+AGG | - | tig0015628:32084-32103 | Msa1356400:intron | 40.0% | |
| GTGATTCAGTGCAATAATGG+AGG | - | tig0015628:32106-32125 | Msa1356400:intron | 40.0% | |
| GTGATTCAGTGCAATAATGG+AGG | - | tig0015628:32106-32125 | Msa1356400:intron | 40.0% | |
| CATGCTCCATTTATTGATCC+TGG | - | tig0015628:32268-32287 | Msa1356400:CDS | 40.0% | |
| TTCGTAGGAGAAAACTGAAG+GGG | - | tig0015628:32545-32564 | Msa1356400:five_prime_UTR | 40.0% | |
| ! | GTGATGGAGATGACAGAGAA+AGG | + | tig0015628:23973-23992 | None:intergenic | 45.0% |
| TACTCTGCTTAAACCCATGG+CGG | + | tig0015628:23999-24018 | None:intergenic | 45.0% | |
| ATGGGTTTAAGCAGAGTAGC+CGG | - | tig0015628:24001-24020 | Msa1356400:intron | 45.0% | |
| AAGAACAAGCGCTCCCATTA+AGG | - | tig0015628:24117-24136 | Msa1356400:intron | 45.0% | |
| GGATTTAGAAGCAGCTCAGA+AGG | - | tig0015628:24171-24190 | Msa1356400:intron | 45.0% | |
| AGCGGTTCGAGATGATTTCT+TGG | + | tig0015628:24227-24246 | None:intergenic | 45.0% | |
| GCAATTGAGTTCAACGAGAG+CGG | + | tig0015628:24290-24309 | None:intergenic | 45.0% | |
| CGATTGAGGACCAAAGTGAA+AGG | + | tig0015628:24401-24420 | None:intergenic | 45.0% | |
| CTTTGGTCCTCAATCGTTAG+AGG | - | tig0015628:24405-24424 | Msa1356400:three_prime_UTR | 45.0% | |
| ACTGAAGTAGCTGCCATCAT+GGG | - | tig0015628:24579-24598 | Msa1356400:intron | 45.0% | |
| CTTCACATTCTCTCCCATGA+TGG | + | tig0015628:24595-24614 | None:intergenic | 45.0% | |
| AGCAGTTAGTTACCAGGTAG+GGG | + | tig0015628:24684-24703 | None:intergenic | 45.0% | |
| GAGCAGTTAGTTACCAGGTA+GGG | + | tig0015628:24685-24704 | None:intergenic | 45.0% | |
| TGAGCAGTTAGTTACCAGGT+AGG | + | tig0015628:24686-24705 | None:intergenic | 45.0% | |
| GGGCAAAAGCTCCAAATCAT+AGG | + | tig0015628:24790-24809 | None:intergenic | 45.0% | |
| GAAACTAGACTTAGGTGGTC+TGG | - | tig0015628:24857-24876 | Msa1356400:intron | 45.0% | |
| GAGGATAGTCAGATCTCTAG+AGG | - | tig0015628:24931-24950 | Msa1356400:intron | 45.0% | |
| ! | TAAAATTTAGGGTGGGTGGG+TGG | - | tig0015628:25116-25135 | Msa1356400:intron | 45.0% |
| ! | AAAATTTAGGGTGGGTGGGT+GGG | - | tig0015628:25117-25136 | Msa1356400:intron | 45.0% |
| AGAATTGGCCATGCATGTAG+TGG | - | tig0015628:25464-25483 | Msa1356400:intron | 45.0% | |
| ! | TTTTGCTGCCACTACATGCA+TGG | + | tig0015628:25475-25494 | None:intergenic | 45.0% |
| TGTGGACATGGAGTATAGAG+AGG | + | tig0015628:26020-26039 | None:intergenic | 45.0% | |
| GTCATTCTTGAGTGTGGACA+TGG | + | tig0015628:26032-26051 | None:intergenic | 45.0% | |
| GAGGTTGTCATTCTTGAGTG+TGG | + | tig0015628:26038-26057 | None:intergenic | 45.0% | |
| ATATTTCAGGCAGAAGCCTC+TGG | - | tig0015628:26339-26358 | Msa1356400:intron | 45.0% | |
| ATTCTGTCTATGGCCTTCTG+AGG | + | tig0015628:26369-26388 | None:intergenic | 45.0% | |
| TCAGAAGGCCATAGACAGAA+TGG | - | tig0015628:26368-26387 | Msa1356400:intron | 45.0% | |
| GCCATAGACAGAATGGTTGA+AGG | - | tig0015628:26375-26394 | Msa1356400:intron | 45.0% | |
| ! | GAAACCAAGGTATCACGTCA+TGG | + | tig0015628:28063-28082 | None:intergenic | 45.0% |
| ACAAAGTCCAACCCAAGCAT+TGG | + | tig0015628:28147-28166 | None:intergenic | 45.0% | |
| ! | GAAACCAAGGTATCACGTCA+TGG | + | tig0015628:28063-28082 | None:intergenic | 45.0% |
| ACAAAGTCCAACCCAAGCAT+TGG | + | tig0015628:28147-28166 | None:intergenic | 45.0% | |
| ! | TGCCATGACGTGATACCTTT+TGG | - | tig0015628:28411-28430 | Msa1356400:intron | 45.0% |
| GAGAAAATGTAGAGAGGGAG+TGG | - | tig0015628:28759-28778 | Msa1356400:intron | 45.0% | |
| GAAAATGTAGAGAGGGAGTG+GGG | - | tig0015628:28761-28780 | Msa1356400:intron | 45.0% | |
| AAAATGTAGAGAGGGAGTGG+GGG | - | tig0015628:28762-28781 | Msa1356400:intron | 45.0% | |
| CTTCTTACAACGGCATCTAC+GGG | + | tig0015628:28853-28872 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | tig0015628:28876-28895 | Msa1356400:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | tig0015628:28886-28905 | Msa1356400:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | tig0015628:29020-29039 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | tig0015628:29021-29040 | None:intergenic | 45.0% |
| ATCTGTACACCTAAGCCTCA+TGG | - | tig0015628:29172-29191 | Msa1356400:intron | 45.0% | |
| CTGTGGGGGACTGTTTATAT+CGG | + | tig0015628:29399-29418 | None:intergenic | 45.0% | |
| !! | ACAACTTGGTGTCAGGACTA+TGG | - | tig0015628:29453-29472 | Msa1356400:intron | 45.0% |
| GGAAGTCCTACTTCCTTACA+TGG | - | tig0015628:29592-29611 | Msa1356400:intron | 45.0% | |
| TACTCACATGAGCCTAATCC+AGG | - | tig0015628:29664-29683 | Msa1356400:intron | 45.0% | |
| GCATAGGCTCTATAAGTCGT+AGG | - | tig0015628:29812-29831 | Msa1356400:intron | 45.0% | |
| TAGGCTCTATAAGTCGTAGG+TGG | - | tig0015628:29815-29834 | Msa1356400:intron | 45.0% | |
| !! | TGCCCTAAGGGCATTGTTTA+AGG | + | tig0015628:30083-30102 | None:intergenic | 45.0% |
| CTTGCTAACAAGTGCCCTAA+GGG | + | tig0015628:30095-30114 | None:intergenic | 45.0% | |
| TCTTGCTAACAAGTGCCCTA+AGG | + | tig0015628:30096-30115 | None:intergenic | 45.0% | |
| AACACAGGTCTGATGGAAAG+TGG | + | tig0015628:30153-30172 | None:intergenic | 45.0% | |
| !!! | TTTTTTGCGTGCAATGCCAG+CGG | - | tig0015628:30322-30341 | Msa1356400:intron | 45.0% |
| CTTTCATGTCTCTTTGCAGG+AGG | - | tig0015628:30740-30759 | Msa1356400:intron | 45.0% | |
| AAGTTGGGGAAGGAATTGCA+AGG | - | tig0015628:30826-30845 | Msa1356400:intron | 45.0% | |
| GACCAAGTTCAATGACAGTG+TGG | + | tig0015628:30917-30936 | None:intergenic | 45.0% | |
| !! | CTTATCCCACTTAGTGGACT+CGG | - | tig0015628:31114-31133 | Msa1356400:CDS | 45.0% |
| GTATACCCCTACCTCTAGTA+AGG | - | tig0015628:31242-31261 | Msa1356400:intron | 45.0% | |
| ! | TTGTTGGATTGAGTAGTGGG+GGG | + | tig0015628:31322-31341 | None:intergenic | 45.0% |
| ! | AGATTGGAAAGGGAAGGTGT+GGG | + | tig0015628:31424-31443 | None:intergenic | 45.0% |
| TAGATTGGAAAGGGAAGGTG+TGG | + | tig0015628:31425-31444 | None:intergenic | 45.0% | |
| GGGTGTCAATCTAGTTGTCA+CGG | - | tig0015628:31635-31654 | Msa1356400:intron | 45.0% | |
| GTCAATCTAGTTGTCACGGT+AGG | - | tig0015628:31639-31658 | Msa1356400:intron | 45.0% | |
| CTAGTTGTCACGGTAGGATT+TGG | - | tig0015628:31645-31664 | Msa1356400:intron | 45.0% | |
| AGTTGTCACGGTAGGATTTG+GGG | - | tig0015628:31647-31666 | Msa1356400:intron | 45.0% | |
| ! | GGTAGGATTTGGGGCTAAAA+GGG | - | tig0015628:31656-31675 | Msa1356400:intron | 45.0% |
| TTCATCTGAGTCTGTTGCTC+AGG | - | tig0015628:32069-32088 | Msa1356400:intron | 45.0% | |
| ! | AACACGACGTTGTCTGCTTT+TGG | + | tig0015628:32488-32507 | None:intergenic | 45.0% |
| CCTACGAAATAGACCCTGAA+AGG | + | tig0015628:32533-32552 | None:intergenic | 45.0% | |
| CCTTTCAGGGTCTATTTCGT+AGG | - | tig0015628:32530-32549 | Msa1356400:exon | 45.0% | |
| !!! | ATTTTTATTTTTTAATTATG+TGG | + | tig0015628:26727-26746 | None:intergenic | 5.0% |
| !!! | ATGATTTTTAAATTTATTTT+GGG | + | tig0015628:27447-27466 | None:intergenic | 5.0% |
| !!! | TATGATTTTTAAATTTATTT+TGG | + | tig0015628:27446-27465 | None:intergenic | 5.0% |
| !!! | AAAAAAAAATTGAAAATTTT+CGG | + | tig0015628:27358-27377 | None:intergenic | 5.0% |
| !!! | TTTTAAAATTTAATATTATG+TGG | - | tig0015628:27656-27675 | Msa1356400:CDS | 5.0% |
| !! | AAAATAAACTTAAAAATATT+AGG | + | tig0015628:29633-29652 | None:intergenic | 5.0% |
| GGCTACTCTGCTTAAACCCA+TGG | + | tig0015628:24002-24021 | None:intergenic | 50.0% | |
| TTTCATGCACAGACGTCTGC+CGG | + | tig0015628:24023-24042 | None:intergenic | 50.0% | |
| GCGGCTTTCACGTCCTTAAT+GGG | + | tig0015628:24133-24152 | None:intergenic | 50.0% | |
| AGCGGCTTTCACGTCCTTAA+TGG | + | tig0015628:24134-24153 | None:intergenic | 50.0% | |
| CCAATTGGAATCGACGAGAG+CGG | + | tig0015628:24152-24171 | None:intergenic | 50.0% | |
| !! | CGCTCTCGTCGATTCCAATT+GGG | - | tig0015628:24150-24169 | Msa1356400:intron | 50.0% |
| AGCGAGTAAACCTTCGGAAG+CGG | + | tig0015628:24245-24264 | None:intergenic | 50.0% | |
| AGCGAGAGCGAGTAAACCTT+CGG | + | tig0015628:24251-24270 | None:intergenic | 50.0% | |
| ! | GTTCAACGAGAGCGGTTTTG+TGG | + | tig0015628:24282-24301 | None:intergenic | 50.0% |
| CACTGAAGTAGCTGCCATCA+TGG | - | tig0015628:24578-24597 | Msa1356400:intron | 50.0% | |
| GTGATGCACGCACCATCTAA+TGG | - | tig0015628:24630-24649 | Msa1356400:intron | 50.0% | |
| TTAGTTACCAGGTAGGGGAC+TGG | + | tig0015628:24679-24698 | None:intergenic | 50.0% | |
| TGCAGCAAGGAGAGTAGATC+AGG | - | tig0015628:24907-24926 | Msa1356400:intron | 50.0% | |
| CAAGGAGAGTAGATCAGGTG+AGG | - | tig0015628:24912-24931 | Msa1356400:intron | 50.0% | |
| ! | AGTCAGATCTCTAGAGGCAG+CGG | - | tig0015628:24937-24956 | Msa1356400:intron | 50.0% |
| CTTATCCCACTAAGTGAGGC+CGG | + | tig0015628:25074-25093 | None:intergenic | 50.0% | |
| ! | AAATTTAGGGTGGGTGGGTG+GGG | - | tig0015628:25118-25137 | Msa1356400:intron | 50.0% |
| ! | CAAGGCAGGGAAGGCTTTTT+AGG | - | tig0015628:25150-25169 | Msa1356400:intron | 50.0% |
| TTAGGTTTGGGTCGCATTGC+TGG | - | tig0015628:25378-25397 | Msa1356400:intron | 50.0% | |
| TAGGTTTGGGTCGCATTGCT+GGG | - | tig0015628:25379-25398 | Msa1356400:intron | 50.0% | |
| GCAGATGCACTTCAACGTGT+TGG | - | tig0015628:25438-25457 | Msa1356400:intron | 50.0% | |
| GACATGGAGTATAGAGAGGC+TGG | + | tig0015628:26016-26035 | None:intergenic | 50.0% | |
| AGCCTCTGGTAAACCTCAGA+AGG | - | tig0015628:26353-26372 | Msa1356400:intron | 50.0% | |
| TGCCAACTCAGCTGAACAGT+GGG | + | tig0015628:26640-26659 | None:intergenic | 50.0% | |
| TTGCCAACTCAGCTGAACAG+TGG | + | tig0015628:26641-26660 | None:intergenic | 50.0% | |
| ! | ACTGTTCAGCTGAGTTGGCA+AGG | - | tig0015628:26640-26659 | Msa1356400:intron | 50.0% |
| ! | CTGTTCAGCTGAGTTGGCAA+GGG | - | tig0015628:26641-26660 | Msa1356400:intron | 50.0% |
| ! | ACTGTGCAACTTTTGCCACG+TGG | - | tig0015628:26686-26705 | Msa1356400:intron | 50.0% |
| ! | ACTGTGCAACTTTTGCCACG+TGG | + | tig0015628:26686-26705 | None:intergenic | 50.0% |
| !! | ACCAATGCTTGGGTTGGACT+TGG | - | tig0015628:27967-27986 | Msa1356400:intron | 50.0% |
| ACCAAGTCCAACCCAAGCAT+TGG | + | tig0015628:27971-27990 | None:intergenic | 50.0% | |
| CATGCCATGACGTGATACCT+TGG | - | tig0015628:28056-28075 | Msa1356400:intron | 50.0% | |
| CATGCCATGACGTGATACCT+TGG | - | tig0015628:28056-28075 | Msa1356400:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | tig0015628:29016-29035 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | tig0015628:29022-29041 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | tig0015628:29019-29038 | Msa1356400:intron | 50.0% | |
| GAACATGAGCCATGAGGCTT+AGG | + | tig0015628:29184-29203 | None:intergenic | 50.0% | |
| AAGCCTCATGGCTCATGTTC+TGG | - | tig0015628:29184-29203 | Msa1356400:intron | 50.0% | |
| ! | TCATGTTCTGGACCCAAAGG+TGG | - | tig0015628:29196-29215 | Msa1356400:intron | 50.0% |
| CACAGCAAACACAGGTCTGA+TGG | + | tig0015628:30160-30179 | None:intergenic | 50.0% | |
| GGTCAGTGACCAGCAAATGA+AGG | - | tig0015628:30296-30315 | Msa1356400:intron | 50.0% | |
| ATCAAGAAGAATGGGTCCGC+TGG | + | tig0015628:30341-30360 | None:intergenic | 50.0% | |
| TACGGATGAACCCACCTCTT+TGG | + | tig0015628:30781-30800 | None:intergenic | 50.0% | |
| ! | AAGAGGTGGGTTCATCCGTA+AGG | - | tig0015628:30781-30800 | Msa1356400:intron | 50.0% |
| ! | AGAGGTGGGTTCATCCGTAA+GGG | - | tig0015628:30782-30801 | Msa1356400:intron | 50.0% |
| CTCAGAATGGAAGTTGGGGA+AGG | - | tig0015628:30816-30835 | Msa1356400:intron | 50.0% | |
| CCACTAAGTGGGATAAGGCT+CGG | + | tig0015628:31111-31130 | None:intergenic | 50.0% | |
| CGAGTCCACTAAGTGGGATA+AGG | + | tig0015628:31116-31135 | None:intergenic | 50.0% | |
| TGTAGCCGAGTCCACTAAGT+GGG | + | tig0015628:31122-31141 | None:intergenic | 50.0% | |
| ATGTAGCCGAGTCCACTAAG+TGG | + | tig0015628:31123-31142 | None:intergenic | 50.0% | |
| ! | CGGTAGGATTTGGGGCTAAA+AGG | - | tig0015628:31655-31674 | Msa1356400:intron | 50.0% |
| !! | GAGGGTGTCCATCATGGAAT+AGG | + | tig0015628:31918-31937 | None:intergenic | 50.0% |
| !! | TAGTGTGTACTAGTGGGCTC+TGG | - | tig0015628:32354-32373 | Msa1356400:CDS | 50.0% |
| GTAGGAGAAAACTGAAGGGG+AGG | - | tig0015628:32548-32567 | Msa1356400:five_prime_UTR | 50.0% | |
| AAAACTGAAGGGGAGGACAG+AGG | - | tig0015628:32555-32574 | Msa1356400:five_prime_UTR | 50.0% | |
| !! | CCGCTCTCGTCGATTCCAAT+TGG | - | tig0015628:24149-24168 | Msa1356400:intron | 55.0% |
| TCATCTCGAACCGCTTCCGA+AGG | - | tig0015628:24232-24251 | Msa1356400:intron | 55.0% | |
| !! | CAACGAGAGCGGTTTTGTGG+TGG | + | tig0015628:24279-24298 | None:intergenic | 55.0% |
| CTTCATACCAGTCCCCTACC+TGG | - | tig0015628:24669-24688 | Msa1356400:intron | 55.0% | |
| ACTAAGTGAGGCCGGCTACA+TGG | + | tig0015628:25066-25085 | None:intergenic | 55.0% | |
| ATGTAGCCGGCCTCACTTAG+TGG | - | tig0015628:25065-25084 | Msa1356400:intron | 55.0% | |
| TGTAGCCGGCCTCACTTAGT+GGG | - | tig0015628:25066-25085 | Msa1356400:intron | 55.0% | |
| ! | AATTTAGGGTGGGTGGGTGG+GGG | - | tig0015628:25119-25138 | Msa1356400:intron | 55.0% |
| GCATCAGTTCAAGGCAGGGA+AGG | - | tig0015628:25141-25160 | Msa1356400:intron | 55.0% | |
| !! | GGCCTTCTGAGGTTTACCAG+AGG | + | tig0015628:26358-26377 | None:intergenic | 55.0% |
| ! | CAGCTGAGTTGGCAAGGGTT+TGG | - | tig0015628:26646-26665 | Msa1356400:intron | 55.0% |
| !! | ACTGTAGCGCTGATGTGGCA+TGG | + | tig0015628:27743-27762 | None:intergenic | 55.0% |
| ATGCCACATCAGCGCTACAG+TGG | - | tig0015628:27742-27761 | Msa1356400:CDS | 55.0% | |
| TGCCACATCAGCGCTACAGT+GGG | - | tig0015628:27743-27762 | Msa1356400:CDS | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | tig0015628:29008-29027 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | tig0015628:29007-29026 | Msa1356400:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | tig0015628:29008-29027 | Msa1356400:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | tig0015628:29014-29033 | Msa1356400:intron | 55.0% | |
| GGTCCAGAACATGAGCCATG+AGG | + | tig0015628:29190-29209 | None:intergenic | 55.0% | |
| ! | GGCTCATGTTCTGGACCCAA+AGG | - | tig0015628:29193-29212 | Msa1356400:intron | 55.0% |
| AGTCCCCTGGATCAAGCGTT+AGG | - | tig0015628:29417-29436 | Msa1356400:intron | 55.0% | |
| ! | TGTCTCTTTGCAGGAGGTGC+TGG | - | tig0015628:30746-30765 | Msa1356400:intron | 55.0% |
| ! | CCGAGCCTTATCCCACTTAG+TGG | - | tig0015628:31108-31127 | Msa1356400:CDS | 55.0% |
| !! | ACTTGCGAGGGTGTCCATCA+TGG | + | tig0015628:31924-31943 | None:intergenic | 55.0% |
| ATCTCCATCACTCGCCGCCA+TGG | - | tig0015628:23982-24001 | Msa1356400:three_prime_UTR | 60.0% | |
| TCTCCATCACTCGCCGCCAT+GGG | - | tig0015628:23983-24002 | Msa1356400:three_prime_UTR | 60.0% | |
| AAACCCATGGCGGCGAGTGA+TGG | + | tig0015628:23989-24008 | None:intergenic | 60.0% | |
| !! | TGGGTGGGGGCATCAGTTCA+AGG | - | tig0015628:25132-25151 | Msa1356400:intron | 60.0% |
| !! | TGGGGGCATCAGTTCAAGGC+AGG | - | tig0015628:25136-25155 | Msa1356400:intron | 60.0% |
| !! | GGGGGCATCAGTTCAAGGCA+GGG | - | tig0015628:25137-25156 | Msa1356400:intron | 60.0% |
| TCAGCTGAACAGTGGGCCCA+GGG | + | tig0015628:26633-26652 | None:intergenic | 60.0% | |
| GGCCCACTGTTCAGCTGAGT+TGG | - | tig0015628:26635-26654 | Msa1356400:intron | 60.0% | |
| TTGGCAAGGGTTTGGCCACG+TGG | - | tig0015628:26654-26673 | Msa1356400:intron | 60.0% | |
| CACAGTCAGCAACTGCCACG+TGG | + | tig0015628:27711-27730 | None:intergenic | 60.0% | |
| !! | TTTGCCACGTGGCACTGACG+TGG | + | tig0015628:27686-27705 | None:intergenic | 60.0% |
| CACAGTCAGCAACTGCCACG+TGG | - | tig0015628:27711-27730 | Msa1356400:CDS | 60.0% | |
| CTTGATCCAGGGGACTGTGG+GGG | + | tig0015628:29413-29432 | None:intergenic | 60.0% | |
| GCTTGATCCAGGGGACTGTG+GGG | + | tig0015628:29414-29433 | None:intergenic | 60.0% | |
| CGCTTGATCCAGGGGACTGT+GGG | + | tig0015628:29415-29434 | None:intergenic | 60.0% | |
| ACGCTTGATCCAGGGGACTG+TGG | + | tig0015628:29416-29435 | None:intergenic | 60.0% | |
| CTCAGCTGAACAGTGGGCCC+AGG | + | tig0015628:26634-26653 | None:intergenic | 65.0% | |
| !! | TTTGCCACGTGGCGCTGACG+TGG | - | tig0015628:26697-26716 | Msa1356400:intron | 65.0% |
| GTGGCATGGCATTCGCCACG+TGG | + | tig0015628:27729-27748 | None:intergenic | 65.0% | |
| !! | GGCCCACTGTAGCGCTGATG+TGG | + | tig0015628:27748-27767 | None:intergenic | 65.0% |
| ATCAGCGCTACAGTGGGCCC+AGG | - | tig0015628:27749-27768 | Msa1356400:CDS | 65.0% | |
| TCAGCGCTACAGTGGGCCCA+GGG | - | tig0015628:27750-27769 | Msa1356400:CDS | 65.0% | |
| AACAGTCCCCCACAGTCCCC+TGG | - | tig0015628:29404-29423 | Msa1356400:intron | 65.0% | |
| CACGCCACGTCAGTGCCACG+TGG | - | tig0015628:27679-27698 | Msa1356400:CDS | 70.0% | |
| CACGCCACGTCAGCGCCACG+TGG | + | tig0015628:26704-26723 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0015628 | gene | 23942 | 32598 | 23942 | ID=Msa1356400;Name=Msa1356400 |
| tig0015628 | mRNA | 23942 | 32598 | 23942 | ID=Msa1356400-mRNA-1;Parent=Msa1356400;Name=Msa1356400-mRNA-1;_AED=0.14;_eAED=0.14;_QI=59|0.71|0.87|0.87|0.85|0.75|8|263|410 |
| tig0015628 | exon | 23942 | 24002 | 23942 | ID=Msa1356400-mRNA-1:exon:9943;Parent=Msa1356400-mRNA-1 |
| tig0015628 | exon | 24239 | 24483 | 24239 | ID=Msa1356400-mRNA-1:exon:9942;Parent=Msa1356400-mRNA-1 |
| tig0015628 | exon | 25693 | 25781 | 25693 | ID=Msa1356400-mRNA-1:exon:9941;Parent=Msa1356400-mRNA-1 |
| tig0015628 | exon | 27592 | 27780 | 27592 | ID=Msa1356400-mRNA-1:exon:9940;Parent=Msa1356400-mRNA-1 |
| tig0015628 | exon | 30067 | 30192 | 30067 | ID=Msa1356400-mRNA-1:exon:9939;Parent=Msa1356400-mRNA-1 |
| tig0015628 | exon | 30974 | 31158 | 30974 | ID=Msa1356400-mRNA-1:exon:9938;Parent=Msa1356400-mRNA-1 |
| tig0015628 | exon | 31850 | 32024 | 31850 | ID=Msa1356400-mRNA-1:exon:9937;Parent=Msa1356400-mRNA-1 |
| tig0015628 | exon | 32114 | 32598 | 32114 | ID=Msa1356400-mRNA-1:exon:9936;Parent=Msa1356400-mRNA-1 |
| tig0015628 | five_prime_UTR | 32540 | 32598 | 32540 | ID=Msa1356400-mRNA-1:five_prime_utr;Parent=Msa1356400-mRNA-1 |
| tig0015628 | CDS | 32114 | 32539 | 32114 | ID=Msa1356400-mRNA-1:cds;Parent=Msa1356400-mRNA-1 |
| tig0015628 | CDS | 31850 | 32024 | 31850 | ID=Msa1356400-mRNA-1:cds;Parent=Msa1356400-mRNA-1 |
| tig0015628 | CDS | 30974 | 31158 | 30974 | ID=Msa1356400-mRNA-1:cds;Parent=Msa1356400-mRNA-1 |
| tig0015628 | CDS | 30067 | 30192 | 30067 | ID=Msa1356400-mRNA-1:cds;Parent=Msa1356400-mRNA-1 |
| tig0015628 | CDS | 27592 | 27780 | 27592 | ID=Msa1356400-mRNA-1:cds;Parent=Msa1356400-mRNA-1 |
| tig0015628 | CDS | 25693 | 25781 | 25693 | ID=Msa1356400-mRNA-1:cds;Parent=Msa1356400-mRNA-1 |
| tig0015628 | CDS | 24441 | 24483 | 24441 | ID=Msa1356400-mRNA-1:cds;Parent=Msa1356400-mRNA-1 |
| tig0015628 | three_prime_UTR | 24239 | 24440 | 24239 | ID=Msa1356400-mRNA-1:three_prime_utr;Parent=Msa1356400-mRNA-1 |
| tig0015628 | three_prime_UTR | 23942 | 24002 | 23942 | ID=Msa1356400-mRNA-1:three_prime_utr;Parent=Msa1356400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
