AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1204770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204770 MtrunA17_Chr4g0053731 88.462 208 18 3 1 203 1 207 4.15e-75 225
Msa1204770 MtrunA17_Chr5g0401591 49.393 247 58 10 1 203 1 224 6.69e-20 84.0
Msa1204770 MtrunA17_Chr7g0235881 45.902 122 58 4 1 121 1 115 1.39e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204770 AT4G37450.1 58.333 72 22 3 1 64 1 72 8.83e-13 65.1
Msa1204770 AT4G37450.2 58.333 72 22 3 1 64 70 141 1.80e-12 65.1

Find 104 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTATAGATATATAAATTT+TGG 0.155194 8_1:-60567725 Msa1204770:three_prime_UTR
CAAACTTTCAACTTTCAATA+TGG 0.214473 8_1:-60569735 Msa1204770:exon
CCCTTGCTTGGTGCTGGAGC+TGG 0.249954 8_1:+60569341 None:intergenic
TTCTTTCCCTTGCTTGGTGC+TGG 0.263309 8_1:+60569335 None:intergenic
GGTGTTGTTGGTGTGGTTGT+AGG 0.304465 8_1:+60569572 None:intergenic
GGTGCTCCTGCTGGTGGTGC+TGG 0.331916 8_1:+60569263 None:intergenic
AATGCTAGATATCAGAATAA+TGG 0.353155 8_1:+60567830 None:intergenic
AGCAGCTGGAGGAGATGATT+TGG 0.353606 8_1:+60569532 None:intergenic
AGTGAGTGAGAGAGGGTTTG+AGG 0.359174 8_1:+60569809 None:intergenic
TTGTTCTTCTTTCCCTTGCT+TGG 0.362413 8_1:+60569329 None:intergenic
GGAGGTTTGGTTGCCGGAGC+AGG 0.362636 8_1:+60569506 None:intergenic
GTGGTGGCGGCCGGAGTTGA+TGG 0.392958 8_1:+60569623 None:intergenic
CACCACTCCTGTTGCATCTC+CGG 0.398121 8_1:-60569606 Msa1204770:CDS
AGAGTGGAGCAGAAACTATC+AGG 0.404075 8_1:-60568140 Msa1204770:CDS
GCTGCCGGAGGTTTGGTTGC+CGG 0.408047 8_1:+60569500 None:intergenic
GCACCACCAGCAGGAGCACC+TGG 0.414679 8_1:-60569260 Msa1204770:CDS
CCTGCATCTTCGCTTGGTCC+AGG 0.415878 8_1:+60569242 None:intergenic
GCTGGTGGTGGAGTGCTGAC+TGG 0.421414 8_1:+60569458 None:intergenic
GGTGGTGAGCTGACTGGAGC+AGG 0.426318 8_1:+60569407 None:intergenic
GTGCGATGAAAGGTTTATAT+AGG 0.426969 8_1:+60569836 None:intergenic
GCCGGAGCAGGTGCAGCAGC+TGG 0.433970 8_1:+60569518 None:intergenic
AGCACCATCACCAGCGTTGT+TGG 0.436518 8_1:-60569291 Msa1204770:CDS
GCACCATCACCAGCGTTGTT+GGG 0.436941 8_1:-60569290 Msa1204770:CDS
GCAGCTGGAGGAGATGATTT+GGG 0.439226 8_1:+60569533 None:intergenic
GGTGCTGGAGCTGGAACCGC+TGG 0.440384 8_1:+60569350 None:intergenic
AAGATTTACCTCATCGTTCG+CGG 0.444163 8_1:+60569199 None:intergenic
TGCATTATCGTCGCCGGCGT+CGG 0.448153 8_1:-60569680 Msa1204770:CDS
GCTCCTGCTGGTGGTGCTGG+TGG 0.457667 8_1:+60569266 None:intergenic
TCCAGCTGCTGCACCTGCTC+CGG 0.458206 8_1:-60569519 Msa1204770:CDS
GAAGAAAGAGTGAGTGAGAG+AGG 0.460675 8_1:+60569801 None:intergenic
CTTGGTCCAGGTGCTCCTGC+TGG 0.461592 8_1:+60569254 None:intergenic
TGGTGATGCTGCCGGAGGTT+TGG 0.463953 8_1:+60569493 None:intergenic
TTGGGAGAAGCAACGGGAGC+TGG 0.468676 8_1:+60569551 None:intergenic
GAGCTGACTGGAGCAGGTGT+GGG 0.472900 8_1:+60569413 None:intergenic
AAATGCGAGCTTACAAATTG+AGG 0.475190 8_1:+60567656 None:intergenic
ACAGGAACTGGTGCTGGTGG+TGG 0.475601 8_1:+60569446 None:intergenic
ACTGCTGGTGGTGAGCTGAC+TGG 0.475791 8_1:+60569401 None:intergenic
AGGCTTAGCTTTGAGCTGGA+TGG 0.476021 8_1:-60568100 Msa1204770:CDS
GGTGGTGATTTGACAGGAAC+TGG 0.477818 8_1:+60569434 None:intergenic
AATGCGAGCTTACAAATTGA+GGG 0.479342 8_1:+60567657 None:intergenic
GGTGCTCCTGCATCTTCGCT+TGG 0.481476 8_1:+60569236 None:intergenic
AGCGAAGATGCAGGAGCACC+TGG 0.485174 8_1:-60569233 Msa1204770:CDS
TGAGCTGACTGGAGCAGGTG+TGG 0.488282 8_1:+60569412 None:intergenic
CTCATCGTTCGCGGTAGAAG+CGG 0.489228 8_1:+60569208 None:intergenic
GCAACGGGAGCTGGTGTTGT+TGG 0.490912 8_1:+60569560 None:intergenic
GATGATTTGGGAGAAGCAAC+GGG 0.491381 8_1:+60569545 None:intergenic
TTGGTGCAGCGGAAGGTGAC+TGG 0.491418 8_1:+60569654 None:intergenic
GTGAGTATGTGACTGCTTGA+CGG 0.492797 8_1:-60567773 Msa1204770:three_prime_UTR
GCTGCTACCGGAGATGCAAC+AGG 0.501881 8_1:+60569599 None:intergenic
AAGAAAGAGTGAGTGAGAGA+GGG 0.505156 8_1:+60569802 None:intergenic
GCAACAGGAGTGGTGGCGGC+CGG 0.507920 8_1:+60569614 None:intergenic
TCCAGCTCCAGCACCAAGCA+AGG 0.510907 8_1:-60569342 Msa1204770:CDS
GGAGTTGATGGTGAGGTGGT+TGG 0.517435 8_1:+60569635 None:intergenic
GTGGTGGTTGGAGCAGCCAC+AGG 0.519021 8_1:+60569374 None:intergenic
CCTGGACCAAGCGAAGATGC+AGG 0.520602 8_1:-60569242 Msa1204770:CDS
GGTCCAGGTGCTCCTGCTGG+TGG 0.523649 8_1:+60569257 None:intergenic
AGGACTTTGATGTTATTTGA+CGG 0.525183 8_1:+60569856 None:intergenic
AGCTGGAACCGCTGGTGTGG+TGG 0.532724 8_1:+60569358 None:intergenic
AGAGTGTGATAATAAGATCA+AGG 0.533089 8_1:+60568044 None:intergenic
GGAACCGCTGGTGTGGTGGT+TGG 0.535849 8_1:+60569362 None:intergenic
TTGAGGAACTGTGCGATGAA+AGG 0.537713 8_1:+60569826 None:intergenic
AACCACCTCACCATCAACTC+CGG 0.540937 8_1:-60569633 Msa1204770:CDS
AGATGATTTGGGAGAAGCAA+CGG 0.541525 8_1:+60569544 None:intergenic
GAGGTGGTTGGTGCAGCGGA+AGG 0.541625 8_1:+60569647 None:intergenic
AACAACGCTGGTGATGGTGC+TGG 0.542731 8_1:+60569293 None:intergenic
AGATGCAACAGGAGTGGTGG+CGG 0.543847 8_1:+60569610 None:intergenic
GTTGTTGGTGTGGTTGTAGG+AGG 0.547446 8_1:+60569575 None:intergenic
TAGGAGGCTTAGCTTTGAGC+TGG 0.549247 8_1:-60568104 Msa1204770:CDS
TGGAGCTGGAACCGCTGGTG+TGG 0.549390 8_1:+60569355 None:intergenic
GGTCCACCAGCACCACCAGC+AGG 0.553644 8_1:-60569269 Msa1204770:CDS
GGAGCAGGTGCAGCAGCTGG+AGG 0.554589 8_1:+60569521 None:intergenic
TTCATCTGCATTATCGTCGC+CGG 0.560042 8_1:-60569686 Msa1204770:CDS
TGCTCCGGCAACCAAACCTC+CGG 0.560313 8_1:-60569504 Msa1204770:CDS
CTGACTGGAGCAGGTGTGGG+TGG 0.564849 8_1:+60569416 None:intergenic
GGCCGGAGTTGATGGTGAGG+TGG 0.565131 8_1:+60569631 None:intergenic
ACCTCCGGCAGCATCACCAC+CGG 0.566788 8_1:-60569489 Msa1204770:CDS
GGACCCAACAACGCTGGTGA+TGG 0.568484 8_1:+60569287 None:intergenic
GATTTGACAGGAACTGGTGC+TGG 0.568714 8_1:+60569440 None:intergenic
ATTATCGTCGCCGGCGTCGG+TGG 0.572475 8_1:-60569677 Msa1204770:CDS
GCAGCCACAGGTGTTACTGC+TGG 0.577094 8_1:+60569386 None:intergenic
CGGAGATGCAACAGGAGTGG+TGG 0.583940 8_1:+60569607 None:intergenic
GTTGTAGGAGGTGCTGCTAC+CGG 0.584827 8_1:+60569587 None:intergenic
ATAGTATCATAGATGTCTCA+AGG 0.606965 8_1:+60567921 None:intergenic
TGCTCCAACCACCACACCAG+CGG 0.608500 8_1:-60569366 Msa1204770:CDS
TGGTGAGGTGGTTGGTGCAG+CGG 0.610327 8_1:+60569643 None:intergenic
GGGAGCTGGTGTTGTTGGTG+TGG 0.611766 8_1:+60569565 None:intergenic
TTGACAGGAACTGGTGCTGG+TGG 0.617477 8_1:+60569443 None:intergenic
CGATAATGCAGATGAATGCG+AGG 0.621043 8_1:+60569693 None:intergenic
GCCGGTGGTGATGCTGCCGG+AGG 0.626872 8_1:+60569488 None:intergenic
ATCAGGAGCTTGAAGATGCT+AGG 0.627021 8_1:-60568123 Msa1204770:CDS
CTGACTGGTGTCACCGCCGG+TGG 0.627806 8_1:+60569473 None:intergenic
GGCGGCCGGAGTTGATGGTG+AGG 0.629145 8_1:+60569628 None:intergenic
TACCGGAGATGCAACAGGAG+TGG 0.639684 8_1:+60569604 None:intergenic
GGAAAGAAGAACAAGAAGCA+CGG 0.641441 8_1:-60569320 Msa1204770:CDS
CCAGCTCCAGCACCAAGCAA+GGG 0.643686 8_1:-60569341 Msa1204770:CDS
GGTGTGGGTGGTGATTTGAC+AGG 0.655827 8_1:+60569428 None:intergenic
GCTGGTGGACCCAACAACGC+TGG 0.656094 8_1:+60569281 None:intergenic
CGCTTCTACCGCGAACGATG+AGG 0.660407 8_1:-60569207 Msa1204770:intron
GCCACAGGTGTTACTGCTGG+TGG 0.660434 8_1:+60569389 None:intergenic
TCCGGCAGCATCACCACCGG+CGG 0.672479 8_1:-60569486 Msa1204770:CDS
AGGAGCTTGAAGATGCTAGG+AGG 0.675654 8_1:-60568120 Msa1204770:CDS
GATAATGCAGATGAATGCGA+GGG 0.678738 8_1:+60569694 None:intergenic
ACTTTGATGTTATTTGACGG+TGG 0.699372 8_1:+60569859 None:intergenic
ACCACCAGCAGTAACACCTG+TGG 0.703069 8_1:-60569390 Msa1204770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAATTTATATTTATAT+TGG + chr8_1:60569192-60569211 None:intergenic 0.0%
!! ATATAAATTTATATTTATAT+TGG + chr8_1:60569192-60569211 None:intergenic 0.0%
!!! TTACTTTCTTTTTAAAATAA+AGG + chr8_1:60568791-60568810 None:intergenic 10.0%
!! AAGAATAAAAAAAATAAAGA+TGG + chr8_1:60569526-60569545 None:intergenic 10.0%
!!! TTGTATAGATATATAAATTT+TGG - chr8_1:60569805-60569824 Msa1204770:five_prime_UTR 10.0%
!!! TTACTTTCTTTTTAAAATAA+AGG + chr8_1:60568791-60568810 None:intergenic 10.0%
!! AAGAATAAAAAAAATAAAGA+TGG + chr8_1:60569526-60569545 None:intergenic 10.0%
!!! TTGTATAGATATATAAATTT+TGG - chr8_1:60569805-60569824 Msa1204770:five_prime_UTR 10.0%
!! AAATAAGGTTATAAAGATAA+AGG - chr8_1:60568692-60568711 Msa1204770:intron 15.0%
!! AATAAGGTTATAAAGATAAA+GGG - chr8_1:60568693-60568712 Msa1204770:intron 15.0%
!! TAAATATATTGTTCATACAA+TGG - chr8_1:60568839-60568858 Msa1204770:intron 15.0%
!! AAATAAGGTTATAAAGATAA+AGG - chr8_1:60568692-60568711 Msa1204770:intron 15.0%
!! AATAAGGTTATAAAGATAAA+GGG - chr8_1:60568693-60568712 Msa1204770:intron 15.0%
!! TAAATATATTGTTCATACAA+TGG - chr8_1:60568839-60568858 Msa1204770:intron 15.0%
!!! ATTTATTTTCAGACCTAATA+AGG + chr8_1:60568544-60568563 None:intergenic 20.0%
!!! ATTTTATTCATATTTGGATC+TGG + chr8_1:60568667-60568686 None:intergenic 20.0%
!!! AGAAAATATGTTCATAGTTT+TGG - chr8_1:60568737-60568756 Msa1204770:intron 20.0%
!! TGAATAGTATATGTCTATTT+AGG + chr8_1:60568816-60568835 None:intergenic 20.0%
!! TTCTTATTGGTCAAAAATAA+TGG - chr8_1:60568934-60568953 Msa1204770:intron 20.0%
!! GTATGATTATAAAACAATGA+TGG - chr8_1:60569312-60569331 Msa1204770:CDS 20.0%
!! AATGATGGTTTAATGTTAAT+CGG - chr8_1:60569327-60569346 Msa1204770:CDS 20.0%
!!! AAGAAATTTCAAGATTTGTT+TGG + chr8_1:60569354-60569373 None:intergenic 20.0%
!!! ATTATTTTTTGAAAATGCTG+TGG - chr8_1:60569645-60569664 Msa1204770:CDS 20.0%
!!! ATTTATTTTCAGACCTAATA+AGG + chr8_1:60568544-60568563 None:intergenic 20.0%
!!! ATTTTATTCATATTTGGATC+TGG + chr8_1:60568667-60568686 None:intergenic 20.0%
!!! AGAAAATATGTTCATAGTTT+TGG - chr8_1:60568737-60568756 Msa1204770:intron 20.0%
!! TGAATAGTATATGTCTATTT+AGG + chr8_1:60568816-60568835 None:intergenic 20.0%
!! TTCTTATTGGTCAAAAATAA+TGG - chr8_1:60568934-60568953 Msa1204770:intron 20.0%
!! GTATGATTATAAAACAATGA+TGG - chr8_1:60569312-60569331 Msa1204770:CDS 20.0%
!! AATGATGGTTTAATGTTAAT+CGG - chr8_1:60569327-60569346 Msa1204770:CDS 20.0%
!!! AAGAAATTTCAAGATTTGTT+TGG + chr8_1:60569354-60569373 None:intergenic 20.0%
!!! ATTATTTTTTGAAAATGCTG+TGG - chr8_1:60569645-60569664 Msa1204770:CDS 20.0%
! CAAACTTTCAACTTTCAATA+TGG - chr8_1:60567795-60567814 Msa1204770:three_prime_UTR 25.0%
! ATAGTTAACATAGTACAATG+TGG - chr8_1:60568391-60568410 Msa1204770:intron 25.0%
! CTAACCAAAATCTAAGTTTA+AGG - chr8_1:60568474-60568493 Msa1204770:intron 25.0%
! ACCATAAAAAGAAGAGTAAT+TGG - chr8_1:60568576-60568595 Msa1204770:intron 25.0%
!! ACCAATTACTCTTCTTTTTA+TGG + chr8_1:60568580-60568599 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + chr8_1:60568922-60568941 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - chr8_1:60568921-60568940 Msa1204770:intron 25.0%
!! AAAATAATGGAGAGAGAAAA+AGG - chr8_1:60568947-60568966 Msa1204770:intron 25.0%
!!! ATGAAATGATGTTAGTTTTC+TGG - chr8_1:60569244-60569263 Msa1204770:CDS 25.0%
!!! TCTTATTTTTGGCTATCTTA+TGG - chr8_1:60569542-60569561 Msa1204770:CDS 25.0%
!!! CTTATTTTTGGCTATCTTAT+GGG - chr8_1:60569543-60569562 Msa1204770:CDS 25.0%
!!! TGTGGTCATTATTTTATTCT+TGG - chr8_1:60569663-60569682 Msa1204770:CDS 25.0%
! AATGCTAGATATCAGAATAA+TGG + chr8_1:60569703-60569722 None:intergenic 25.0%
!! TTACAAATTGAGGGATTTTA+CGG + chr8_1:60569867-60569886 None:intergenic 25.0%
! CAAACTTTCAACTTTCAATA+TGG - chr8_1:60567795-60567814 Msa1204770:three_prime_UTR 25.0%
! ATAGTTAACATAGTACAATG+TGG - chr8_1:60568391-60568410 Msa1204770:intron 25.0%
! CTAACCAAAATCTAAGTTTA+AGG - chr8_1:60568474-60568493 Msa1204770:intron 25.0%
! ACCATAAAAAGAAGAGTAAT+TGG - chr8_1:60568576-60568595 Msa1204770:intron 25.0%
!! ACCAATTACTCTTCTTTTTA+TGG + chr8_1:60568580-60568599 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + chr8_1:60568922-60568941 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - chr8_1:60568921-60568940 Msa1204770:intron 25.0%
!! AAAATAATGGAGAGAGAAAA+AGG - chr8_1:60568947-60568966 Msa1204770:intron 25.0%
!!! ATGAAATGATGTTAGTTTTC+TGG - chr8_1:60569244-60569263 Msa1204770:CDS 25.0%
!!! TCTTATTTTTGGCTATCTTA+TGG - chr8_1:60569542-60569561 Msa1204770:CDS 25.0%
!!! CTTATTTTTGGCTATCTTAT+GGG - chr8_1:60569543-60569562 Msa1204770:CDS 25.0%
!!! TGTGGTCATTATTTTATTCT+TGG - chr8_1:60569663-60569682 Msa1204770:CDS 25.0%
! AATGCTAGATATCAGAATAA+TGG + chr8_1:60569703-60569722 None:intergenic 25.0%
!! TTACAAATTGAGGGATTTTA+CGG + chr8_1:60569867-60569886 None:intergenic 25.0%
! AGGACTTTGATGTTATTTGA+CGG + chr8_1:60567677-60567696 None:intergenic 30.0%
! CACACCTTAAACTTAGATTT+TGG + chr8_1:60568481-60568500 None:intergenic 30.0%
TATTCATATTTGGATCTGGA+TGG + chr8_1:60568663-60568682 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG + chr8_1:60568896-60568915 None:intergenic 30.0%
GTCAAAAAGTTGTCAAAAAG+TGG - chr8_1:60569014-60569033 Msa1204770:intron 30.0%
ATTAACAGTTACTGATGATC+TGG - chr8_1:60569073-60569092 Msa1204770:intron 30.0%
TTAACAGTTACTGATGATCT+GGG - chr8_1:60569074-60569093 Msa1204770:intron 30.0%
!!! TGTTCCATTTTTTTTCAGAG+TGG - chr8_1:60569374-60569393 Msa1204770:CDS 30.0%
!! GTTGTTTTATTCTTCTAGTC+TGG - chr8_1:60569455-60569474 Msa1204770:CDS 30.0%
AGAGTGTGATAATAAGATCA+AGG + chr8_1:60569489-60569508 None:intergenic 30.0%
ATAGTATCATAGATGTCTCA+AGG + chr8_1:60569612-60569631 None:intergenic 30.0%
! TACAAATTGAGGGATTTTAC+GGG + chr8_1:60569866-60569885 None:intergenic 30.0%
! AGGACTTTGATGTTATTTGA+CGG + chr8_1:60567677-60567696 None:intergenic 30.0%
! CACACCTTAAACTTAGATTT+TGG + chr8_1:60568481-60568500 None:intergenic 30.0%
TATTCATATTTGGATCTGGA+TGG + chr8_1:60568663-60568682 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG + chr8_1:60568896-60568915 None:intergenic 30.0%
GTCAAAAAGTTGTCAAAAAG+TGG - chr8_1:60569014-60569033 Msa1204770:intron 30.0%
ATTAACAGTTACTGATGATC+TGG - chr8_1:60569073-60569092 Msa1204770:intron 30.0%
TTAACAGTTACTGATGATCT+GGG - chr8_1:60569074-60569093 Msa1204770:intron 30.0%
!!! TGTTCCATTTTTTTTCAGAG+TGG - chr8_1:60569374-60569393 Msa1204770:CDS 30.0%
!! GTTGTTTTATTCTTCTAGTC+TGG - chr8_1:60569455-60569474 Msa1204770:CDS 30.0%
AGAGTGTGATAATAAGATCA+AGG + chr8_1:60569489-60569508 None:intergenic 30.0%
ATAGTATCATAGATGTCTCA+AGG + chr8_1:60569612-60569631 None:intergenic 30.0%
! TACAAATTGAGGGATTTTAC+GGG + chr8_1:60569866-60569885 None:intergenic 30.0%
! ACTTTGATGTTATTTGACGG+TGG + chr8_1:60567674-60567693 None:intergenic 35.0%
GTGCGATGAAAGGTTTATAT+AGG + chr8_1:60567697-60567716 None:intergenic 35.0%
! TGCTCCACTCTGAAAAAAAA+TGG + chr8_1:60569381-60569400 None:intergenic 35.0%
! ACAAATTGAGGGATTTTACG+GGG + chr8_1:60569865-60569884 None:intergenic 35.0%
! ACTTTGATGTTATTTGACGG+TGG + chr8_1:60567674-60567693 None:intergenic 35.0%
GTGCGATGAAAGGTTTATAT+AGG + chr8_1:60567697-60567716 None:intergenic 35.0%
! TGCTCCACTCTGAAAAAAAA+TGG + chr8_1:60569381-60569400 None:intergenic 35.0%
! ACAAATTGAGGGATTTTACG+GGG + chr8_1:60569865-60569884 None:intergenic 35.0%
AAGAAAGAGTGAGTGAGAGA+GGG + chr8_1:60567731-60567750 None:intergenic 40.0%
GATAATGCAGATGAATGCGA+GGG + chr8_1:60567839-60567858 None:intergenic 40.0%
! AGATGATTTGGGAGAAGCAA+CGG + chr8_1:60567989-60568008 None:intergenic 40.0%
TTGTTCTTCTTTCCCTTGCT+TGG + chr8_1:60568204-60568223 None:intergenic 40.0%
GGAAAGAAGAACAAGAAGCA+CGG - chr8_1:60568210-60568229 Msa1204770:intron 40.0%
AAGATTTACCTCATCGTTCG+CGG + chr8_1:60568334-60568353 None:intergenic 40.0%
!!! GAGCTGTCGTTTTTGTTTTC+TGG - chr8_1:60568625-60568644 Msa1204770:intron 40.0%
! AAGATAAAGGGTGTACTCTC+TGG - chr8_1:60568705-60568724 Msa1204770:intron 40.0%
AAGAAAGAGTGAGTGAGAGA+GGG + chr8_1:60567731-60567750 None:intergenic 40.0%
GATAATGCAGATGAATGCGA+GGG + chr8_1:60567839-60567858 None:intergenic 40.0%
! AGATGATTTGGGAGAAGCAA+CGG + chr8_1:60567989-60568008 None:intergenic 40.0%
TTGTTCTTCTTTCCCTTGCT+TGG + chr8_1:60568204-60568223 None:intergenic 40.0%
GGAAAGAAGAACAAGAAGCA+CGG - chr8_1:60568210-60568229 Msa1204770:intron 40.0%
AAGATTTACCTCATCGTTCG+CGG + chr8_1:60568334-60568353 None:intergenic 40.0%
!!! GAGCTGTCGTTTTTGTTTTC+TGG - chr8_1:60568625-60568644 Msa1204770:intron 40.0%
! AAGATAAAGGGTGTACTCTC+TGG - chr8_1:60568705-60568724 Msa1204770:intron 40.0%
TTGAGGAACTGTGCGATGAA+AGG + chr8_1:60567707-60567726 None:intergenic 45.0%
GAAGAAAGAGTGAGTGAGAG+AGG + chr8_1:60567732-60567751 None:intergenic 45.0%
CGATAATGCAGATGAATGCG+AGG + chr8_1:60567840-60567859 None:intergenic 45.0%
TTCATCTGCATTATCGTCGC+CGG - chr8_1:60567844-60567863 Msa1204770:three_prime_UTR 45.0%
! GATGATTTGGGAGAAGCAAC+GGG + chr8_1:60567988-60568007 None:intergenic 45.0%
GGTGTAGGAGACACCTTATT+AGG - chr8_1:60568528-60568547 Msa1204770:intron 45.0%
AGAGTGGAGCAGAAACTATC+AGG - chr8_1:60569390-60569409 Msa1204770:CDS 45.0%
ATCAGGAGCTTGAAGATGCT+AGG - chr8_1:60569407-60569426 Msa1204770:CDS 45.0%
GTGAGTATGTGACTGCTTGA+CGG - chr8_1:60569757-60569776 Msa1204770:five_prime_UTR 45.0%
! GGATTTTACGGGGAAAAGAC+AGG + chr8_1:60569855-60569874 None:intergenic 45.0%
TTGAGGAACTGTGCGATGAA+AGG + chr8_1:60567707-60567726 None:intergenic 45.0%
GAAGAAAGAGTGAGTGAGAG+AGG + chr8_1:60567732-60567751 None:intergenic 45.0%
CGATAATGCAGATGAATGCG+AGG + chr8_1:60567840-60567859 None:intergenic 45.0%
TTCATCTGCATTATCGTCGC+CGG - chr8_1:60567844-60567863 Msa1204770:three_prime_UTR 45.0%
! GATGATTTGGGAGAAGCAAC+GGG + chr8_1:60567988-60568007 None:intergenic 45.0%
GGTGTAGGAGACACCTTATT+AGG - chr8_1:60568528-60568547 Msa1204770:intron 45.0%
AGAGTGGAGCAGAAACTATC+AGG - chr8_1:60569390-60569409 Msa1204770:CDS 45.0%
ATCAGGAGCTTGAAGATGCT+AGG - chr8_1:60569407-60569426 Msa1204770:CDS 45.0%
GTGAGTATGTGACTGCTTGA+CGG - chr8_1:60569757-60569776 Msa1204770:five_prime_UTR 45.0%
! GGATTTTACGGGGAAAAGAC+AGG + chr8_1:60569855-60569874 None:intergenic 45.0%
!!! TTATTTATTTTATTCATATT+TGG + chr8_1:60568673-60568692 None:intergenic 5.0%
!! TGAATAAAATAAATAAAATA+AGG - chr8_1:60568677-60568696 Msa1204770:intron 5.0%
!!! ATTTTTTTTATTCTTATTTT+TGG - chr8_1:60569531-60569550 Msa1204770:CDS 5.0%
!!! TTATTTATTTTATTCATATT+TGG + chr8_1:60568673-60568692 None:intergenic 5.0%
!! TGAATAAAATAAATAAAATA+AGG - chr8_1:60568677-60568696 Msa1204770:intron 5.0%
!!! ATTTTTTTTATTCTTATTTT+TGG - chr8_1:60569531-60569550 Msa1204770:CDS 5.0%
AGTGAGTGAGAGAGGGTTTG+AGG + chr8_1:60567724-60567743 None:intergenic 50.0%
AACCACCTCACCATCAACTC+CGG - chr8_1:60567897-60567916 Msa1204770:three_prime_UTR 50.0%
GTTGTTGGTGTGGTTGTAGG+AGG + chr8_1:60567958-60567977 None:intergenic 50.0%
!! GGTGTTGTTGGTGTGGTTGT+AGG + chr8_1:60567961-60567980 None:intergenic 50.0%
GCAGCTGGAGGAGATGATTT+GGG + chr8_1:60568000-60568019 None:intergenic 50.0%
AGCAGCTGGAGGAGATGATT+TGG + chr8_1:60568001-60568020 None:intergenic 50.0%
GATTTGACAGGAACTGGTGC+TGG + chr8_1:60568093-60568112 None:intergenic 50.0%
GGTGGTGATTTGACAGGAAC+TGG + chr8_1:60568099-60568118 None:intergenic 50.0%
!! TTCTTTCCCTTGCTTGGTGC+TGG + chr8_1:60568198-60568217 None:intergenic 50.0%
AGGAGCTTGAAGATGCTAGG+AGG - chr8_1:60569410-60569429 Msa1204770:CDS 50.0%
!! TAGGAGGCTTAGCTTTGAGC+TGG - chr8_1:60569426-60569445 Msa1204770:CDS 50.0%
!! AGGCTTAGCTTTGAGCTGGA+TGG - chr8_1:60569430-60569449 Msa1204770:CDS 50.0%
AGTGAGTGAGAGAGGGTTTG+AGG + chr8_1:60567724-60567743 None:intergenic 50.0%
AACCACCTCACCATCAACTC+CGG - chr8_1:60567897-60567916 Msa1204770:three_prime_UTR 50.0%
GTTGTTGGTGTGGTTGTAGG+AGG + chr8_1:60567958-60567977 None:intergenic 50.0%
!! GGTGTTGTTGGTGTGGTTGT+AGG + chr8_1:60567961-60567980 None:intergenic 50.0%
GCAGCTGGAGGAGATGATTT+GGG + chr8_1:60568000-60568019 None:intergenic 50.0%
AGCAGCTGGAGGAGATGATT+TGG + chr8_1:60568001-60568020 None:intergenic 50.0%
GATTTGACAGGAACTGGTGC+TGG + chr8_1:60568093-60568112 None:intergenic 50.0%
GGTGGTGATTTGACAGGAAC+TGG + chr8_1:60568099-60568118 None:intergenic 50.0%
!! TTCTTTCCCTTGCTTGGTGC+TGG + chr8_1:60568198-60568217 None:intergenic 50.0%
AGGAGCTTGAAGATGCTAGG+AGG - chr8_1:60569410-60569429 Msa1204770:CDS 50.0%
!! TAGGAGGCTTAGCTTTGAGC+TGG - chr8_1:60569426-60569445 Msa1204770:CDS 50.0%
!! AGGCTTAGCTTTGAGCTGGA+TGG - chr8_1:60569430-60569449 Msa1204770:CDS 50.0%
!! GGAGTTGATGGTGAGGTGGT+TGG + chr8_1:60567898-60567917 None:intergenic 55.0%
AGATGCAACAGGAGTGGTGG+CGG + chr8_1:60567923-60567942 None:intergenic 55.0%
CACCACTCCTGTTGCATCTC+CGG - chr8_1:60567924-60567943 Msa1204770:three_prime_UTR 55.0%
TACCGGAGATGCAACAGGAG+TGG + chr8_1:60567929-60567948 None:intergenic 55.0%
!! GTTGTAGGAGGTGCTGCTAC+CGG + chr8_1:60567946-60567965 None:intergenic 55.0%
! TTGACAGGAACTGGTGCTGG+TGG + chr8_1:60568090-60568109 None:intergenic 55.0%
GGTGTGGGTGGTGATTTGAC+AGG + chr8_1:60568105-60568124 None:intergenic 55.0%
ACCACCAGCAGTAACACCTG+TGG - chr8_1:60568140-60568159 Msa1204770:CDS 55.0%
!! AACAACGCTGGTGATGGTGC+TGG + chr8_1:60568240-60568259 None:intergenic 55.0%
AGCACCATCACCAGCGTTGT+TGG - chr8_1:60568239-60568258 Msa1204770:intron 55.0%
GCACCATCACCAGCGTTGTT+GGG - chr8_1:60568240-60568259 Msa1204770:intron 55.0%
TCATCGTTCGCGGTAGAAGC+GGG + chr8_1:60568324-60568343 None:intergenic 55.0%
CTCATCGTTCGCGGTAGAAG+CGG + chr8_1:60568325-60568344 None:intergenic 55.0%
TACACCGAACCCACCGTCAA+TGG + chr8_1:60568514-60568533 None:intergenic 55.0%
!! ATTGACGGTGGGTTCGGTGT+AGG - chr8_1:60568513-60568532 Msa1204770:intron 55.0%
!! GGAGTTGATGGTGAGGTGGT+TGG + chr8_1:60567898-60567917 None:intergenic 55.0%
AGATGCAACAGGAGTGGTGG+CGG + chr8_1:60567923-60567942 None:intergenic 55.0%
CACCACTCCTGTTGCATCTC+CGG - chr8_1:60567924-60567943 Msa1204770:three_prime_UTR 55.0%
TACCGGAGATGCAACAGGAG+TGG + chr8_1:60567929-60567948 None:intergenic 55.0%
!! GTTGTAGGAGGTGCTGCTAC+CGG + chr8_1:60567946-60567965 None:intergenic 55.0%
! TTGACAGGAACTGGTGCTGG+TGG + chr8_1:60568090-60568109 None:intergenic 55.0%
GGTGTGGGTGGTGATTTGAC+AGG + chr8_1:60568105-60568124 None:intergenic 55.0%
ACCACCAGCAGTAACACCTG+TGG - chr8_1:60568140-60568159 Msa1204770:CDS 55.0%
!! AACAACGCTGGTGATGGTGC+TGG + chr8_1:60568240-60568259 None:intergenic 55.0%
AGCACCATCACCAGCGTTGT+TGG - chr8_1:60568239-60568258 Msa1204770:intron 55.0%
GCACCATCACCAGCGTTGTT+GGG - chr8_1:60568240-60568259 Msa1204770:intron 55.0%
TCATCGTTCGCGGTAGAAGC+GGG + chr8_1:60568324-60568343 None:intergenic 55.0%
CTCATCGTTCGCGGTAGAAG+CGG + chr8_1:60568325-60568344 None:intergenic 55.0%
TACACCGAACCCACCGTCAA+TGG + chr8_1:60568514-60568533 None:intergenic 55.0%
!! ATTGACGGTGGGTTCGGTGT+AGG - chr8_1:60568513-60568532 Msa1204770:intron 55.0%
TGCATTATCGTCGCCGGCGT+CGG - chr8_1:60567850-60567869 Msa1204770:three_prime_UTR 60.0%
TTGGTGCAGCGGAAGGTGAC+TGG + chr8_1:60567879-60567898 None:intergenic 60.0%
! TGGTGAGGTGGTTGGTGCAG+CGG + chr8_1:60567890-60567909 None:intergenic 60.0%
CGGAGATGCAACAGGAGTGG+TGG + chr8_1:60567926-60567945 None:intergenic 60.0%
GCTGCTACCGGAGATGCAAC+AGG + chr8_1:60567934-60567953 None:intergenic 60.0%
!! GGGAGCTGGTGTTGTTGGTG+TGG + chr8_1:60567968-60567987 None:intergenic 60.0%
!! GCAACGGGAGCTGGTGTTGT+TGG + chr8_1:60567973-60567992 None:intergenic 60.0%
TTGGGAGAAGCAACGGGAGC+TGG + chr8_1:60567982-60568001 None:intergenic 60.0%
TGCTCCGGCAACCAAACCTC+CGG - chr8_1:60568026-60568045 Msa1204770:three_prime_UTR 60.0%
! TGGTGATGCTGCCGGAGGTT+TGG + chr8_1:60568040-60568059 None:intergenic 60.0%
!! ACAGGAACTGGTGCTGGTGG+TGG + chr8_1:60568087-60568106 None:intergenic 60.0%
GAGCTGACTGGAGCAGGTGT+GGG + chr8_1:60568120-60568139 None:intergenic 60.0%
TGAGCTGACTGGAGCAGGTG+TGG + chr8_1:60568121-60568140 None:intergenic 60.0%
! ACTGCTGGTGGTGAGCTGAC+TGG + chr8_1:60568132-60568151 None:intergenic 60.0%
!! GCCACAGGTGTTACTGCTGG+TGG + chr8_1:60568144-60568163 None:intergenic 60.0%
!! GCAGCCACAGGTGTTACTGC+TGG + chr8_1:60568147-60568166 None:intergenic 60.0%
TGCTCCAACCACCACACCAG+CGG - chr8_1:60568164-60568183 Msa1204770:intron 60.0%
TCCAGCTCCAGCACCAAGCA+AGG - chr8_1:60568188-60568207 Msa1204770:intron 60.0%
CCAGCTCCAGCACCAAGCAA+GGG - chr8_1:60568189-60568208 Msa1204770:intron 60.0%
GGACCCAACAACGCTGGTGA+TGG + chr8_1:60568246-60568265 None:intergenic 60.0%
CCTGCATCTTCGCTTGGTCC+AGG + chr8_1:60568291-60568310 None:intergenic 60.0%
CCTGGACCAAGCGAAGATGC+AGG - chr8_1:60568288-60568307 Msa1204770:intron 60.0%
GGTGCTCCTGCATCTTCGCT+TGG + chr8_1:60568297-60568316 None:intergenic 60.0%
!! AGCGAAGATGCAGGAGCACC+TGG - chr8_1:60568297-60568316 Msa1204770:intron 60.0%
CGCTTCTACCGCGAACGATG+AGG - chr8_1:60568323-60568342 Msa1204770:intron 60.0%
! GCCACCATTGACGGTGGGTT+CGG - chr8_1:60568507-60568526 Msa1204770:intron 60.0%
ACCGAACCCACCGTCAATGG+TGG + chr8_1:60568511-60568530 None:intergenic 60.0%
TGCATTATCGTCGCCGGCGT+CGG - chr8_1:60567850-60567869 Msa1204770:three_prime_UTR 60.0%
TTGGTGCAGCGGAAGGTGAC+TGG + chr8_1:60567879-60567898 None:intergenic 60.0%
! TGGTGAGGTGGTTGGTGCAG+CGG + chr8_1:60567890-60567909 None:intergenic 60.0%
CGGAGATGCAACAGGAGTGG+TGG + chr8_1:60567926-60567945 None:intergenic 60.0%
GCTGCTACCGGAGATGCAAC+AGG + chr8_1:60567934-60567953 None:intergenic 60.0%
!! GGGAGCTGGTGTTGTTGGTG+TGG + chr8_1:60567968-60567987 None:intergenic 60.0%
!! GCAACGGGAGCTGGTGTTGT+TGG + chr8_1:60567973-60567992 None:intergenic 60.0%
TTGGGAGAAGCAACGGGAGC+TGG + chr8_1:60567982-60568001 None:intergenic 60.0%
TGCTCCGGCAACCAAACCTC+CGG - chr8_1:60568026-60568045 Msa1204770:three_prime_UTR 60.0%
! TGGTGATGCTGCCGGAGGTT+TGG + chr8_1:60568040-60568059 None:intergenic 60.0%
!! ACAGGAACTGGTGCTGGTGG+TGG + chr8_1:60568087-60568106 None:intergenic 60.0%
GAGCTGACTGGAGCAGGTGT+GGG + chr8_1:60568120-60568139 None:intergenic 60.0%
TGAGCTGACTGGAGCAGGTG+TGG + chr8_1:60568121-60568140 None:intergenic 60.0%
! ACTGCTGGTGGTGAGCTGAC+TGG + chr8_1:60568132-60568151 None:intergenic 60.0%
!! GCCACAGGTGTTACTGCTGG+TGG + chr8_1:60568144-60568163 None:intergenic 60.0%
!! GCAGCCACAGGTGTTACTGC+TGG + chr8_1:60568147-60568166 None:intergenic 60.0%
TGCTCCAACCACCACACCAG+CGG - chr8_1:60568164-60568183 Msa1204770:intron 60.0%
TCCAGCTCCAGCACCAAGCA+AGG - chr8_1:60568188-60568207 Msa1204770:intron 60.0%
CCAGCTCCAGCACCAAGCAA+GGG - chr8_1:60568189-60568208 Msa1204770:intron 60.0%
GGACCCAACAACGCTGGTGA+TGG + chr8_1:60568246-60568265 None:intergenic 60.0%
CCTGCATCTTCGCTTGGTCC+AGG + chr8_1:60568291-60568310 None:intergenic 60.0%
CCTGGACCAAGCGAAGATGC+AGG - chr8_1:60568288-60568307 Msa1204770:intron 60.0%
GGTGCTCCTGCATCTTCGCT+TGG + chr8_1:60568297-60568316 None:intergenic 60.0%
!! AGCGAAGATGCAGGAGCACC+TGG - chr8_1:60568297-60568316 Msa1204770:intron 60.0%
CGCTTCTACCGCGAACGATG+AGG - chr8_1:60568323-60568342 Msa1204770:intron 60.0%
! GCCACCATTGACGGTGGGTT+CGG - chr8_1:60568507-60568526 Msa1204770:intron 60.0%
ACCGAACCCACCGTCAATGG+TGG + chr8_1:60568511-60568530 None:intergenic 60.0%
! ATTATCGTCGCCGGCGTCGG+TGG - chr8_1:60567853-60567872 Msa1204770:three_prime_UTR 65.0%
! GAGGTGGTTGGTGCAGCGGA+AGG + chr8_1:60567886-60567905 None:intergenic 65.0%
!! GGCCGGAGTTGATGGTGAGG+TGG + chr8_1:60567902-60567921 None:intergenic 65.0%
TCCAGCTGCTGCACCTGCTC+CGG - chr8_1:60568011-60568030 Msa1204770:three_prime_UTR 65.0%
! GGAGGTTTGGTTGCCGGAGC+AGG + chr8_1:60568027-60568046 None:intergenic 65.0%
! GCTGCCGGAGGTTTGGTTGC+CGG + chr8_1:60568033-60568052 None:intergenic 65.0%
ACCTCCGGCAGCATCACCAC+CGG - chr8_1:60568041-60568060 Msa1204770:three_prime_UTR 65.0%
!! GTGCTGACTGGTGTCACCGC+CGG + chr8_1:60568063-60568082 None:intergenic 65.0%
!! GCTGGTGGTGGAGTGCTGAC+TGG + chr8_1:60568075-60568094 None:intergenic 65.0%
CTGACTGGAGCAGGTGTGGG+TGG + chr8_1:60568117-60568136 None:intergenic 65.0%
GGTGGTGAGCTGACTGGAGC+AGG + chr8_1:60568126-60568145 None:intergenic 65.0%
GTGGTGGTTGGAGCAGCCAC+AGG + chr8_1:60568159-60568178 None:intergenic 65.0%
GGAACCGCTGGTGTGGTGGT+TGG + chr8_1:60568171-60568190 None:intergenic 65.0%
AGCTGGAACCGCTGGTGTGG+TGG + chr8_1:60568175-60568194 None:intergenic 65.0%
TGGAGCTGGAACCGCTGGTG+TGG + chr8_1:60568178-60568197 None:intergenic 65.0%
!! CCCTTGCTTGGTGCTGGAGC+TGG + chr8_1:60568192-60568211 None:intergenic 65.0%
! GCTGGTGGACCCAACAACGC+TGG + chr8_1:60568252-60568271 None:intergenic 65.0%
CTTGGTCCAGGTGCTCCTGC+TGG + chr8_1:60568279-60568298 None:intergenic 65.0%
TTCGCGGTAGAAGCGGGTCC+AGG + chr8_1:60568318-60568337 None:intergenic 65.0%
GTGCCACGCGCCACCATTGA+CGG - chr8_1:60568498-60568517 Msa1204770:intron 65.0%
CACGCGCCACCATTGACGGT+GGG - chr8_1:60568502-60568521 Msa1204770:intron 65.0%
! ATTATCGTCGCCGGCGTCGG+TGG - chr8_1:60567853-60567872 Msa1204770:three_prime_UTR 65.0%
! GAGGTGGTTGGTGCAGCGGA+AGG + chr8_1:60567886-60567905 None:intergenic 65.0%
!! GGCCGGAGTTGATGGTGAGG+TGG + chr8_1:60567902-60567921 None:intergenic 65.0%
TCCAGCTGCTGCACCTGCTC+CGG - chr8_1:60568011-60568030 Msa1204770:three_prime_UTR 65.0%
! GGAGGTTTGGTTGCCGGAGC+AGG + chr8_1:60568027-60568046 None:intergenic 65.0%
! GCTGCCGGAGGTTTGGTTGC+CGG + chr8_1:60568033-60568052 None:intergenic 65.0%
ACCTCCGGCAGCATCACCAC+CGG - chr8_1:60568041-60568060 Msa1204770:three_prime_UTR 65.0%
!! GTGCTGACTGGTGTCACCGC+CGG + chr8_1:60568063-60568082 None:intergenic 65.0%
!! GCTGGTGGTGGAGTGCTGAC+TGG + chr8_1:60568075-60568094 None:intergenic 65.0%
CTGACTGGAGCAGGTGTGGG+TGG + chr8_1:60568117-60568136 None:intergenic 65.0%
GGTGGTGAGCTGACTGGAGC+AGG + chr8_1:60568126-60568145 None:intergenic 65.0%
GTGGTGGTTGGAGCAGCCAC+AGG + chr8_1:60568159-60568178 None:intergenic 65.0%
GGAACCGCTGGTGTGGTGGT+TGG + chr8_1:60568171-60568190 None:intergenic 65.0%
AGCTGGAACCGCTGGTGTGG+TGG + chr8_1:60568175-60568194 None:intergenic 65.0%
TGGAGCTGGAACCGCTGGTG+TGG + chr8_1:60568178-60568197 None:intergenic 65.0%
!! CCCTTGCTTGGTGCTGGAGC+TGG + chr8_1:60568192-60568211 None:intergenic 65.0%
! GCTGGTGGACCCAACAACGC+TGG + chr8_1:60568252-60568271 None:intergenic 65.0%
CTTGGTCCAGGTGCTCCTGC+TGG + chr8_1:60568279-60568298 None:intergenic 65.0%
TTCGCGGTAGAAGCGGGTCC+AGG + chr8_1:60568318-60568337 None:intergenic 65.0%
GTGCCACGCGCCACCATTGA+CGG - chr8_1:60568498-60568517 Msa1204770:intron 65.0%
CACGCGCCACCATTGACGGT+GGG - chr8_1:60568502-60568521 Msa1204770:intron 65.0%
! AGGTGACTGGCCACCGACGC+CGG + chr8_1:60567866-60567885 None:intergenic 70.0%
!! GGCGGCCGGAGTTGATGGTG+AGG + chr8_1:60567905-60567924 None:intergenic 70.0%
!! GTGGTGGCGGCCGGAGTTGA+TGG + chr8_1:60567910-60567929 None:intergenic 70.0%
!! GCAACAGGAGTGGTGGCGGC+CGG + chr8_1:60567919-60567938 None:intergenic 70.0%
GGAGCAGGTGCAGCAGCTGG+AGG + chr8_1:60568012-60568031 None:intergenic 70.0%
TCCGGCAGCATCACCACCGG+CGG - chr8_1:60568044-60568063 Msa1204770:three_prime_UTR 70.0%
! ACCGCCGGTGGTGATGCTGC+CGG + chr8_1:60568048-60568067 None:intergenic 70.0%
!! CTGACTGGTGTCACCGCCGG+TGG + chr8_1:60568060-60568079 None:intergenic 70.0%
! GGTGCTGGAGCTGGAACCGC+TGG + chr8_1:60568183-60568202 None:intergenic 70.0%
GGTCCACCAGCACCACCAGC+AGG - chr8_1:60568261-60568280 Msa1204770:intron 70.0%
! GCTCCTGCTGGTGGTGCTGG+TGG + chr8_1:60568267-60568286 None:intergenic 70.0%
! GGTGCTCCTGCTGGTGGTGC+TGG + chr8_1:60568270-60568289 None:intergenic 70.0%
!! GCACCACCAGCAGGAGCACC+TGG - chr8_1:60568270-60568289 Msa1204770:intron 70.0%
GGTCCAGGTGCTCCTGCTGG+TGG + chr8_1:60568276-60568295 None:intergenic 70.0%
! CCACCGTCAATGGTGGCGCG+TGG + chr8_1:60568504-60568523 None:intergenic 70.0%
CCACGCGCCACCATTGACGG+TGG - chr8_1:60568501-60568520 Msa1204770:intron 70.0%
! AGGTGACTGGCCACCGACGC+CGG + chr8_1:60567866-60567885 None:intergenic 70.0%
!! GGCGGCCGGAGTTGATGGTG+AGG + chr8_1:60567905-60567924 None:intergenic 70.0%
!! GTGGTGGCGGCCGGAGTTGA+TGG + chr8_1:60567910-60567929 None:intergenic 70.0%
!! GCAACAGGAGTGGTGGCGGC+CGG + chr8_1:60567919-60567938 None:intergenic 70.0%
GGAGCAGGTGCAGCAGCTGG+AGG + chr8_1:60568012-60568031 None:intergenic 70.0%
TCCGGCAGCATCACCACCGG+CGG - chr8_1:60568044-60568063 Msa1204770:three_prime_UTR 70.0%
! ACCGCCGGTGGTGATGCTGC+CGG + chr8_1:60568048-60568067 None:intergenic 70.0%
!! CTGACTGGTGTCACCGCCGG+TGG + chr8_1:60568060-60568079 None:intergenic 70.0%
! GGTGCTGGAGCTGGAACCGC+TGG + chr8_1:60568183-60568202 None:intergenic 70.0%
GGTCCACCAGCACCACCAGC+AGG - chr8_1:60568261-60568280 Msa1204770:intron 70.0%
! GCTCCTGCTGGTGGTGCTGG+TGG + chr8_1:60568267-60568286 None:intergenic 70.0%
! GGTGCTCCTGCTGGTGGTGC+TGG + chr8_1:60568270-60568289 None:intergenic 70.0%
!! GCACCACCAGCAGGAGCACC+TGG - chr8_1:60568270-60568289 Msa1204770:intron 70.0%
GGTCCAGGTGCTCCTGCTGG+TGG + chr8_1:60568276-60568295 None:intergenic 70.0%
! CCACCGTCAATGGTGGCGCG+TGG + chr8_1:60568504-60568523 None:intergenic 70.0%
CCACGCGCCACCATTGACGG+TGG - chr8_1:60568501-60568520 Msa1204770:intron 70.0%
GCCGGAGCAGGTGCAGCAGC+TGG + chr8_1:60568015-60568034 None:intergenic 75.0%
! GCCGGTGGTGATGCTGCCGG+AGG + chr8_1:60568045-60568064 None:intergenic 75.0%
GCCGGAGCAGGTGCAGCAGC+TGG + chr8_1:60568015-60568034 None:intergenic 75.0%
! GCCGGTGGTGATGCTGCCGG+AGG + chr8_1:60568045-60568064 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 60567661 60569891 60567661 ID=Msa1204770;Name=Msa1204770
chr8_1 mRNA 60567661 60569891 60567661 ID=Msa1204770-mRNA-1;Parent=Msa1204770;Name=Msa1204770-mRNA-1;_AED=0.04;_eAED=0.04;_QI=153|1|1|1|1|1|2|419|203
chr8_1 exon 60567661 60568160 60567661 ID=Msa1204770-mRNA-1:exon:19659;Parent=Msa1204770-mRNA-1
chr8_1 exon 60569208 60569891 60569208 ID=Msa1204770-mRNA-1:exon:19658;Parent=Msa1204770-mRNA-1
chr8_1 five_prime_UTR 60569739 60569891 60569739 ID=Msa1204770-mRNA-1:five_prime_utr;Parent=Msa1204770-mRNA-1
chr8_1 CDS 60569208 60569738 60569208 ID=Msa1204770-mRNA-1:cds;Parent=Msa1204770-mRNA-1
chr8_1 CDS 60568080 60568160 60568080 ID=Msa1204770-mRNA-1:cds;Parent=Msa1204770-mRNA-1
chr8_1 three_prime_UTR 60567661 60568079 60567661 ID=Msa1204770-mRNA-1:three_prime_utr;Parent=Msa1204770-mRNA-1
Gene Sequence

>Msa1204770

ATGGATCGTAACAATCTCTTCACCCTCGCATTCATCTGCATTATCGTCGCCGGCGTCGGTGGCCAGTCACCTTCCGCTGCACCAACCACCTCACCATCAACTCCGGCCGCCACCACTCCTGTTGCATCTCCGGTAGCAGCACCTCCTACAACCACACCAACAACACCAGCTCCCGTTGCTTCTCCCAAATCATCTCCTCCAGCTGCTGCACCTGCTCCGGCAACCAAACCTCCGGCAGCATCACCACCGGCGGTGACACCAGTCAGCACTCCACCACCAGCACCAGTTCCTGTCAAATCACCACCCACACCTGCTCCAGTCAGCTCACCACCAGCAGTAACACCTGTGGCTGCTCCAACCACCACACCAGCGGTTCCAGCTCCAGCACCAAGCAAGGGAAAGAAGAACAAGAAGCACGGTGCTCCAGCACCATCACCAGCGTTGTTGGGTCCACCAGCACCACCAGCAGGAGCACCTGGACCAAGCGAAGATGCAGGAGCACCTGGACCCGCTTCTACCGCGAACGATGAGAGTGGAGCAGAAACTATCAGGAGCTTGAAGATGCTAGGAGGCTTAGCTTTGAGCTGGATGGCTGTTGTTTTATTCTTCTAG
Protein sequence

>Msa1204770

MDRNNLFTLAFICIIVAGVGGQSPSAAPTTSPSTPAATTPVASPVAAPPTTTPTTPAPVASPKSSPPAAAPAPATKPPAASPPAVTPVSTPPPAPVPVKSPPTPAPVSSPPAVTPVAAPTTTPAVPAPAPSKGKKNKKHGAPAPSPALLGPPAPPAGAPGPSEDAGAPGPASTANDESGAETIRSLKMLGGLALSWMAVVLFF*