AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1329580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329580 MtrunA17_Chr4g0053731 87.981 208 19 3 1 203 1 207 3.31e-74 223
Msa1329580 MtrunA17_Chr5g0401591 51.477 237 68 9 1 203 1 224 1.28e-22 91.3
Msa1329580 MtrunA17_Chr7g0235881 45.902 122 58 4 1 121 1 115 1.62e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329580 AT4G37450.1 58.333 72 22 3 1 64 1 72 1.02e-12 64.7
Msa1329580 AT4G37450.2 58.333 72 22 3 1 64 70 141 1.97e-12 64.7

Find 105 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTATAGATATATAAATTT+TGG 0.155194 8_4:-48258139 Msa1329580:three_prime_UTR
CAAACTTTCAACTTTCAATA+TGG 0.214473 8_4:-48259954 Msa1329580:exon
CCCTTGCTTGGTGCTGGAGC+TGG 0.249954 8_4:+48259560 None:intergenic
TTCTTTCCCTTGCTTGGTGC+TGG 0.263309 8_4:+48259554 None:intergenic
GGTGTTGTTGGTGTGGTTGT+AGG 0.304465 8_4:+48259791 None:intergenic
GGTGCTCCTGCTGGTGGTGC+TGG 0.331916 8_4:+48259482 None:intergenic
AATGCTAGATATCAGAATAA+TGG 0.353155 8_4:+48258244 None:intergenic
AGCAGCTGGAGGAGATGATT+TGG 0.353606 8_4:+48259751 None:intergenic
AGTGAGTGAGAGAGGGTTTG+AGG 0.359174 8_4:+48260027 None:intergenic
TTGTTCTTCTTTCCCTTGCT+TGG 0.362413 8_4:+48259548 None:intergenic
GGAGGTTTGGTTGCCGGAGC+AGG 0.362636 8_4:+48259725 None:intergenic
GTGGTGGCGGCCGGAGTTGA+TGG 0.392958 8_4:+48259842 None:intergenic
CACCACTCCTGTTGCATCTC+CGG 0.398121 8_4:-48259825 Msa1329580:CDS
AGAGTGGAGCAGAAACTATC+AGG 0.404075 8_4:-48258550 Msa1329580:CDS
GCTGCCGGAGGTTTGGTTGC+CGG 0.408047 8_4:+48259719 None:intergenic
GCACCACCAGCAGGAGCACC+TGG 0.414679 8_4:-48259479 Msa1329580:CDS
CCTGCATCTTCGCTTGGTCC+AGG 0.415878 8_4:+48259461 None:intergenic
GCTGGTGGTGGAGTGCTGAC+TGG 0.421414 8_4:+48259677 None:intergenic
GTGCGATGAAAGGTTTATAT+AGG 0.426969 8_4:+48260054 None:intergenic
GCCGGAGCAGGTGCAGCAGC+TGG 0.433970 8_4:+48259737 None:intergenic
AGAGAAAGAGTGAGTGAGAG+AGG 0.435994 8_4:+48260019 None:intergenic
AGCACCATCACCAGCGTTGT+TGG 0.436518 8_4:-48259510 Msa1329580:CDS
GCACCATCACCAGCGTTGTT+GGG 0.436941 8_4:-48259509 Msa1329580:CDS
GCAGCTGGAGGAGATGATTT+GGG 0.439226 8_4:+48259752 None:intergenic
AGGTGACTGGCCTCCGACGC+CGG 0.439946 8_4:+48259886 None:intergenic
GGTGCTGGAGCTGGAACCGC+TGG 0.440384 8_4:+48259569 None:intergenic
AAGATTTACCTCATCGTTCG+CGG 0.444163 8_4:+48259418 None:intergenic
GCTCCTGCTGGTGGTGCTGG+TGG 0.457667 8_4:+48259485 None:intergenic
TGCATTATCGTCGCCGGCGT+CGG 0.458092 8_4:-48259899 Msa1329580:CDS
TCCAGCTGCTGCACCTGCTC+CGG 0.458206 8_4:-48259738 Msa1329580:CDS
CTTGGTCCAGGTGCTCCTGC+TGG 0.461592 8_4:+48259473 None:intergenic
TGGTGATGCTGCCGGAGGTT+TGG 0.463953 8_4:+48259712 None:intergenic
TTGGGAGAAGCAACGGGAGC+TGG 0.468676 8_4:+48259770 None:intergenic
TTGGTGCAGCGGAAGGTGAC+TGG 0.475188 8_4:+48259873 None:intergenic
AAATGCGAGCTTACAAATTG+AGG 0.475190 8_4:+48258070 None:intergenic
ACAGGAACTGGTGCTGGTGG+TGG 0.475601 8_4:+48259665 None:intergenic
AGGCTTAGCTTTGAGCTGGA+TGG 0.476021 8_4:-48258510 Msa1329580:CDS
GGTGGTGATTTGACAGGAAC+TGG 0.477818 8_4:+48259653 None:intergenic
AATGCGAGCTTACAAATTGA+GGG 0.479342 8_4:+48258071 None:intergenic
GGTGCTCCTGCATCTTCGCT+TGG 0.481476 8_4:+48259455 None:intergenic
AGCGAAGATGCAGGAGCACC+TGG 0.485174 8_4:-48259452 Msa1329580:CDS
CTCATCGTTCGCGGTAGAAG+CGG 0.489228 8_4:+48259427 None:intergenic
GCAACGGGAGCTGGTGTTGT+TGG 0.490912 8_4:+48259779 None:intergenic
GATGATTTGGGAGAAGCAAC+GGG 0.491381 8_4:+48259764 None:intergenic
GTGAGTATGTGACTGCTTGA+CGG 0.492797 8_4:-48258187 Msa1329580:three_prime_UTR
ACTGCTGGTGGTGAGCTGAC+TGG 0.499839 8_4:+48259620 None:intergenic
GCTGCTACCGGAGATGCAAC+AGG 0.501881 8_4:+48259818 None:intergenic
GCAACAGGAGTGGTGGCGGC+CGG 0.507920 8_4:+48259833 None:intergenic
TCCAGCTCCAGCACCAAGCA+AGG 0.510907 8_4:-48259561 Msa1329580:CDS
GGAGTTGATGGTGAGGTGGT+TGG 0.517435 8_4:+48259854 None:intergenic
GTGGTGGTTGGAGCAGCCAC+AGG 0.519021 8_4:+48259593 None:intergenic
GGTGGTGAGCTGACTGGAGT+AGG 0.519043 8_4:+48259626 None:intergenic
CCTGGACCAAGCGAAGATGC+AGG 0.520602 8_4:-48259461 Msa1329580:CDS
GGTCCAGGTGCTCCTGCTGG+TGG 0.523649 8_4:+48259476 None:intergenic
AGGACTTTGATGTTATTTGA+CGG 0.525183 8_4:+48260074 None:intergenic
AGCTGGAACCGCTGGTGTGG+TGG 0.532724 8_4:+48259577 None:intergenic
AGAGTGTGATAATAAGATCA+AGG 0.533089 8_4:+48258454 None:intergenic
GGAACCGCTGGTGTGGTGGT+TGG 0.535849 8_4:+48259581 None:intergenic
TTGAGGAACTGTGCGATGAA+AGG 0.537713 8_4:+48260044 None:intergenic
AACCACCTCACCATCAACTC+CGG 0.540937 8_4:-48259852 Msa1329580:CDS
AGATGATTTGGGAGAAGCAA+CGG 0.541525 8_4:+48259763 None:intergenic
GAGGTGGTTGGTGCAGCGGA+AGG 0.541625 8_4:+48259866 None:intergenic
AACAACGCTGGTGATGGTGC+TGG 0.542731 8_4:+48259512 None:intergenic
AGATGCAACAGGAGTGGTGG+CGG 0.543847 8_4:+48259829 None:intergenic
GTTGTTGGTGTGGTTGTAGG+AGG 0.547446 8_4:+48259794 None:intergenic
GAGAAAGAGTGAGTGAGAGA+GGG 0.548946 8_4:+48260020 None:intergenic
TAGGAGGCTTAGCTTTGAGC+TGG 0.549247 8_4:-48258514 Msa1329580:CDS
TGGAGCTGGAACCGCTGGTG+TGG 0.549390 8_4:+48259574 None:intergenic
GAGCTGACTGGAGTAGGTGT+GGG 0.550496 8_4:+48259632 None:intergenic
GGTCCACCAGCACCACCAGC+AGG 0.553644 8_4:-48259488 Msa1329580:CDS
GGAGCAGGTGCAGCAGCTGG+AGG 0.554589 8_4:+48259740 None:intergenic
TTCATCTGCATTATCGTCGC+CGG 0.560042 8_4:-48259905 Msa1329580:CDS
TGCTCCGGCAACCAAACCTC+CGG 0.560313 8_4:-48259723 Msa1329580:CDS
GGCCGGAGTTGATGGTGAGG+TGG 0.565131 8_4:+48259850 None:intergenic
ACCTCCGGCAGCATCACCAC+CGG 0.566788 8_4:-48259708 Msa1329580:CDS
GGACCCAACAACGCTGGTGA+TGG 0.568484 8_4:+48259506 None:intergenic
GATTTGACAGGAACTGGTGC+TGG 0.568714 8_4:+48259659 None:intergenic
TGAGCTGACTGGAGTAGGTG+TGG 0.570354 8_4:+48259631 None:intergenic
GCAGCCACAGGTGTTACTGC+TGG 0.577094 8_4:+48259605 None:intergenic
ATTATCGTCGCCGGCGTCGG+AGG 0.579627 8_4:-48259896 Msa1329580:CDS
CGGAGATGCAACAGGAGTGG+TGG 0.583940 8_4:+48259826 None:intergenic
GTTGTAGGAGGTGCTGCTAC+CGG 0.584827 8_4:+48259806 None:intergenic
ATAGTATCATAGATGTCTCA+AGG 0.606965 8_4:+48258335 None:intergenic
TGCTCCAACCACCACACCAG+CGG 0.608500 8_4:-48259585 Msa1329580:CDS
TGGTGAGGTGGTTGGTGCAG+CGG 0.610327 8_4:+48259862 None:intergenic
GGGAGCTGGTGTTGTTGGTG+TGG 0.611766 8_4:+48259784 None:intergenic
TTGACAGGAACTGGTGCTGG+TGG 0.617477 8_4:+48259662 None:intergenic
CTGACTGGAGTAGGTGTGGG+TGG 0.619650 8_4:+48259635 None:intergenic
CGATAATGCAGATGAATGCG+AGG 0.621043 8_4:+48259912 None:intergenic
GCCGGTGGTGATGCTGCCGG+AGG 0.626872 8_4:+48259707 None:intergenic
ATCAGGAGCTTGAAGATGCT+AGG 0.627021 8_4:-48258533 Msa1329580:CDS
CTGACTGGTGTCACCGCCGG+TGG 0.627806 8_4:+48259692 None:intergenic
GGCGGCCGGAGTTGATGGTG+AGG 0.629145 8_4:+48259847 None:intergenic
TACCGGAGATGCAACAGGAG+TGG 0.639684 8_4:+48259823 None:intergenic
GGAAAGAAGAACAAGAAGCA+CGG 0.641441 8_4:-48259539 Msa1329580:CDS
CCAGCTCCAGCACCAAGCAA+GGG 0.643686 8_4:-48259560 Msa1329580:CDS
GCTGGTGGACCCAACAACGC+TGG 0.656094 8_4:+48259500 None:intergenic
CGCTTCTACCGCGAACGATG+AGG 0.660407 8_4:-48259426 Msa1329580:intron
GCCACAGGTGTTACTGCTGG+TGG 0.660434 8_4:+48259608 None:intergenic
GGTGTGGGTGGTGATTTGAC+AGG 0.660565 8_4:+48259647 None:intergenic
TCCGGCAGCATCACCACCGG+CGG 0.672479 8_4:-48259705 Msa1329580:CDS
AGGAGCTTGAAGATGCTAGG+AGG 0.675654 8_4:-48258530 Msa1329580:CDS
GATAATGCAGATGAATGCGA+GGG 0.678738 8_4:+48259913 None:intergenic
ACTTTGATGTTATTTGACGG+TGG 0.699372 8_4:+48260077 None:intergenic
ACCACCAGCAGTAACACCTG+TGG 0.703069 8_4:-48259609 Msa1329580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAATTTATATTTATAT+TGG + chr8_4:48259415-48259434 None:intergenic 0.0%
!! ATATAAATTTATATTTATAT+TGG + chr8_4:48259415-48259434 None:intergenic 0.0%
!!! TTACTTTCTTTTTAAAATAA+AGG + chr8_4:48259204-48259223 None:intergenic 10.0%
!! AATAAGAATAAAAAAAAAGA+TGG + chr8_4:48259748-48259767 None:intergenic 10.0%
!!! CTTTTTTTTTATTCTTATTT+TGG - chr8_4:48259749-48259768 Msa1329580:CDS 10.0%
!!! TTGTATAGATATATAAATTT+TGG - chr8_4:48260023-48260042 Msa1329580:five_prime_UTR 10.0%
!!! TTACTTTCTTTTTAAAATAA+AGG + chr8_4:48259204-48259223 None:intergenic 10.0%
!! AATAAGAATAAAAAAAAAGA+TGG + chr8_4:48259748-48259767 None:intergenic 10.0%
!!! CTTTTTTTTTATTCTTATTT+TGG - chr8_4:48259749-48259768 Msa1329580:CDS 10.0%
!!! TTGTATAGATATATAAATTT+TGG - chr8_4:48260023-48260042 Msa1329580:five_prime_UTR 10.0%
!! AAATAAGGTTATAAAGATAA+AGG - chr8_4:48259105-48259124 Msa1329580:intron 15.0%
!! AATAAGGTTATAAAGATAAA+GGG - chr8_4:48259106-48259125 Msa1329580:intron 15.0%
!! TAAATATATTGTTCATACAA+TGG - chr8_4:48259255-48259274 Msa1329580:intron 15.0%
!! AAATAAGGTTATAAAGATAA+AGG - chr8_4:48259105-48259124 Msa1329580:intron 15.0%
!! AATAAGGTTATAAAGATAAA+GGG - chr8_4:48259106-48259125 Msa1329580:intron 15.0%
!! TAAATATATTGTTCATACAA+TGG - chr8_4:48259255-48259274 Msa1329580:intron 15.0%
!!! TTTTATTTTCAGACCTAATA+AGG + chr8_4:48258957-48258976 None:intergenic 20.0%
!!! ATTTTATTCATATTTGGATC+TGG + chr8_4:48259080-48259099 None:intergenic 20.0%
!!! AGAAAATATGTTCATAGTTT+TGG - chr8_4:48259150-48259169 Msa1329580:intron 20.0%
!! ATAGTAGTATATGTCTATTT+AGG + chr8_4:48259229-48259248 None:intergenic 20.0%
!! GTATGATTATAAAACAATGA+TGG - chr8_4:48259534-48259553 Msa1329580:CDS 20.0%
!! AATGATGGTTTAATGTTAAT+CGG - chr8_4:48259549-48259568 Msa1329580:CDS 20.0%
!!! AAGAAATTTCAAGATTTGTT+TGG + chr8_4:48259576-48259595 None:intergenic 20.0%
!!! ATTATTTTTTGAAAATGCTG+TGG - chr8_4:48259863-48259882 Msa1329580:CDS 20.0%
!!! TTTTATTTTCAGACCTAATA+AGG + chr8_4:48258957-48258976 None:intergenic 20.0%
!!! ATTTTATTCATATTTGGATC+TGG + chr8_4:48259080-48259099 None:intergenic 20.0%
!!! AGAAAATATGTTCATAGTTT+TGG - chr8_4:48259150-48259169 Msa1329580:intron 20.0%
!! ATAGTAGTATATGTCTATTT+AGG + chr8_4:48259229-48259248 None:intergenic 20.0%
!! GTATGATTATAAAACAATGA+TGG - chr8_4:48259534-48259553 Msa1329580:CDS 20.0%
!! AATGATGGTTTAATGTTAAT+CGG - chr8_4:48259549-48259568 Msa1329580:CDS 20.0%
!!! AAGAAATTTCAAGATTTGTT+TGG + chr8_4:48259576-48259595 None:intergenic 20.0%
!!! ATTATTTTTTGAAAATGCTG+TGG - chr8_4:48259863-48259882 Msa1329580:CDS 20.0%
! CAAACTTTCAACTTTCAATA+TGG - chr8_4:48258208-48258227 Msa1329580:three_prime_UTR 25.0%
! ATAGTTAACATAGTACAATG+TGG - chr8_4:48258804-48258823 Msa1329580:intron 25.0%
! CTAACCAAAATCTAAGTTTA+AGG - chr8_4:48258887-48258906 Msa1329580:intron 25.0%
! ACCATAAAAAGAAGAGTAAT+TGG - chr8_4:48258989-48259008 Msa1329580:intron 25.0%
!! ACCAATTACTCTTCTTTTTA+TGG + chr8_4:48258993-48259012 None:intergenic 25.0%
!!! ATGAAATGATGTTAGTTTTC+TGG - chr8_4:48259467-48259486 Msa1329580:CDS 25.0%
!!! TTCTTATTTTGGCTATCTTA+TGG - chr8_4:48259760-48259779 Msa1329580:CDS 25.0%
!!! TCTTATTTTGGCTATCTTAT+GGG - chr8_4:48259761-48259780 Msa1329580:CDS 25.0%
!!! TGTGGTCATTATTTTATTCT+TGG - chr8_4:48259881-48259900 Msa1329580:CDS 25.0%
! AATGCTAGATATCAGAATAA+TGG + chr8_4:48259921-48259940 None:intergenic 25.0%
!! TTACAAATTGAGGGATTTTA+CGG + chr8_4:48260085-48260104 None:intergenic 25.0%
! CAAACTTTCAACTTTCAATA+TGG - chr8_4:48258208-48258227 Msa1329580:three_prime_UTR 25.0%
! ATAGTTAACATAGTACAATG+TGG - chr8_4:48258804-48258823 Msa1329580:intron 25.0%
! CTAACCAAAATCTAAGTTTA+AGG - chr8_4:48258887-48258906 Msa1329580:intron 25.0%
! ACCATAAAAAGAAGAGTAAT+TGG - chr8_4:48258989-48259008 Msa1329580:intron 25.0%
!! ACCAATTACTCTTCTTTTTA+TGG + chr8_4:48258993-48259012 None:intergenic 25.0%
!!! ATGAAATGATGTTAGTTTTC+TGG - chr8_4:48259467-48259486 Msa1329580:CDS 25.0%
!!! TTCTTATTTTGGCTATCTTA+TGG - chr8_4:48259760-48259779 Msa1329580:CDS 25.0%
!!! TCTTATTTTGGCTATCTTAT+GGG - chr8_4:48259761-48259780 Msa1329580:CDS 25.0%
!!! TGTGGTCATTATTTTATTCT+TGG - chr8_4:48259881-48259900 Msa1329580:CDS 25.0%
! AATGCTAGATATCAGAATAA+TGG + chr8_4:48259921-48259940 None:intergenic 25.0%
!! TTACAAATTGAGGGATTTTA+CGG + chr8_4:48260085-48260104 None:intergenic 25.0%
! AGGACTTTGATGTTATTTGA+CGG + chr8_4:48258091-48258110 None:intergenic 30.0%
! CACACCTTAAACTTAGATTT+TGG + chr8_4:48258894-48258913 None:intergenic 30.0%
TATTCATATTTGGATCTGGA+TGG + chr8_4:48259076-48259095 None:intergenic 30.0%
ATTAACAGTTACTGATGATC+TGG - chr8_4:48259296-48259315 Msa1329580:intron 30.0%
TTAACAGTTACTGATGATCT+GGG - chr8_4:48259297-48259316 Msa1329580:intron 30.0%
!!! TGTTCCATTTTTTTTCAGAG+TGG - chr8_4:48259596-48259615 Msa1329580:CDS 30.0%
!! GTTGTTTTATTCTTCTAGTC+TGG - chr8_4:48259677-48259696 Msa1329580:CDS 30.0%
AGAGTGTGATAATAAGATCA+AGG + chr8_4:48259711-48259730 None:intergenic 30.0%
ATAGTATCATAGATGTCTCA+AGG + chr8_4:48259830-48259849 None:intergenic 30.0%
! TACAAATTGAGGGATTTTAC+GGG + chr8_4:48260084-48260103 None:intergenic 30.0%
! AGGACTTTGATGTTATTTGA+CGG + chr8_4:48258091-48258110 None:intergenic 30.0%
! CACACCTTAAACTTAGATTT+TGG + chr8_4:48258894-48258913 None:intergenic 30.0%
TATTCATATTTGGATCTGGA+TGG + chr8_4:48259076-48259095 None:intergenic 30.0%
ATTAACAGTTACTGATGATC+TGG - chr8_4:48259296-48259315 Msa1329580:intron 30.0%
TTAACAGTTACTGATGATCT+GGG - chr8_4:48259297-48259316 Msa1329580:intron 30.0%
!!! TGTTCCATTTTTTTTCAGAG+TGG - chr8_4:48259596-48259615 Msa1329580:CDS 30.0%
!! GTTGTTTTATTCTTCTAGTC+TGG - chr8_4:48259677-48259696 Msa1329580:CDS 30.0%
AGAGTGTGATAATAAGATCA+AGG + chr8_4:48259711-48259730 None:intergenic 30.0%
ATAGTATCATAGATGTCTCA+AGG + chr8_4:48259830-48259849 None:intergenic 30.0%
! TACAAATTGAGGGATTTTAC+GGG + chr8_4:48260084-48260103 None:intergenic 30.0%
! ACTTTGATGTTATTTGACGG+TGG + chr8_4:48258088-48258107 None:intergenic 35.0%
GTGCGATGAAAGGTTTATAT+AGG + chr8_4:48258111-48258130 None:intergenic 35.0%
! AAGATAAAGGGTGTACTATC+TGG - chr8_4:48259118-48259137 Msa1329580:intron 35.0%
! TGCTCCACTCTGAAAAAAAA+TGG + chr8_4:48259603-48259622 None:intergenic 35.0%
! ACAAATTGAGGGATTTTACG+GGG + chr8_4:48260083-48260102 None:intergenic 35.0%
! ACTTTGATGTTATTTGACGG+TGG + chr8_4:48258088-48258107 None:intergenic 35.0%
GTGCGATGAAAGGTTTATAT+AGG + chr8_4:48258111-48258130 None:intergenic 35.0%
! AAGATAAAGGGTGTACTATC+TGG - chr8_4:48259118-48259137 Msa1329580:intron 35.0%
! TGCTCCACTCTGAAAAAAAA+TGG + chr8_4:48259603-48259622 None:intergenic 35.0%
! ACAAATTGAGGGATTTTACG+GGG + chr8_4:48260083-48260102 None:intergenic 35.0%
GATAATGCAGATGAATGCGA+GGG + chr8_4:48258252-48258271 None:intergenic 40.0%
! AGATGATTTGGGAGAAGCAA+CGG + chr8_4:48258402-48258421 None:intergenic 40.0%
TTGTTCTTCTTTCCCTTGCT+TGG + chr8_4:48258617-48258636 None:intergenic 40.0%
GGAAAGAAGAACAAGAAGCA+CGG - chr8_4:48258623-48258642 Msa1329580:intron 40.0%
AAGATTTACCTCATCGTTCG+CGG + chr8_4:48258747-48258766 None:intergenic 40.0%
!!! GAGCTGTCGTTTTTGTTTTC+TGG - chr8_4:48259038-48259057 Msa1329580:intron 40.0%
GATAATGCAGATGAATGCGA+GGG + chr8_4:48258252-48258271 None:intergenic 40.0%
! AGATGATTTGGGAGAAGCAA+CGG + chr8_4:48258402-48258421 None:intergenic 40.0%
TTGTTCTTCTTTCCCTTGCT+TGG + chr8_4:48258617-48258636 None:intergenic 40.0%
GGAAAGAAGAACAAGAAGCA+CGG - chr8_4:48258623-48258642 Msa1329580:intron 40.0%
AAGATTTACCTCATCGTTCG+CGG + chr8_4:48258747-48258766 None:intergenic 40.0%
!!! GAGCTGTCGTTTTTGTTTTC+TGG - chr8_4:48259038-48259057 Msa1329580:intron 40.0%
TTGAGGAACTGTGCGATGAA+AGG + chr8_4:48258121-48258140 None:intergenic 45.0%
GAGAAAGAGTGAGTGAGAGA+GGG + chr8_4:48258145-48258164 None:intergenic 45.0%
AGAGAAAGAGTGAGTGAGAG+AGG + chr8_4:48258146-48258165 None:intergenic 45.0%
CGATAATGCAGATGAATGCG+AGG + chr8_4:48258253-48258272 None:intergenic 45.0%
TTCATCTGCATTATCGTCGC+CGG - chr8_4:48258257-48258276 Msa1329580:three_prime_UTR 45.0%
! GATGATTTGGGAGAAGCAAC+GGG + chr8_4:48258401-48258420 None:intergenic 45.0%
GGTGTAGGAGACACCTTATT+AGG - chr8_4:48258941-48258960 Msa1329580:intron 45.0%
AGAGTGGAGCAGAAACTATC+AGG - chr8_4:48259612-48259631 Msa1329580:CDS 45.0%
ATCAGGAGCTTGAAGATGCT+AGG - chr8_4:48259629-48259648 Msa1329580:CDS 45.0%
GTGAGTATGTGACTGCTTGA+CGG - chr8_4:48259975-48259994 Msa1329580:five_prime_UTR 45.0%
! GGATTTTACGGGGAAAAGAC+AGG + chr8_4:48260073-48260092 None:intergenic 45.0%
TTGAGGAACTGTGCGATGAA+AGG + chr8_4:48258121-48258140 None:intergenic 45.0%
GAGAAAGAGTGAGTGAGAGA+GGG + chr8_4:48258145-48258164 None:intergenic 45.0%
AGAGAAAGAGTGAGTGAGAG+AGG + chr8_4:48258146-48258165 None:intergenic 45.0%
CGATAATGCAGATGAATGCG+AGG + chr8_4:48258253-48258272 None:intergenic 45.0%
TTCATCTGCATTATCGTCGC+CGG - chr8_4:48258257-48258276 Msa1329580:three_prime_UTR 45.0%
! GATGATTTGGGAGAAGCAAC+GGG + chr8_4:48258401-48258420 None:intergenic 45.0%
GGTGTAGGAGACACCTTATT+AGG - chr8_4:48258941-48258960 Msa1329580:intron 45.0%
AGAGTGGAGCAGAAACTATC+AGG - chr8_4:48259612-48259631 Msa1329580:CDS 45.0%
ATCAGGAGCTTGAAGATGCT+AGG - chr8_4:48259629-48259648 Msa1329580:CDS 45.0%
GTGAGTATGTGACTGCTTGA+CGG - chr8_4:48259975-48259994 Msa1329580:five_prime_UTR 45.0%
! GGATTTTACGGGGAAAAGAC+AGG + chr8_4:48260073-48260092 None:intergenic 45.0%
!!! TTATTTATTTTATTCATATT+TGG + chr8_4:48259086-48259105 None:intergenic 5.0%
!! TGAATAAAATAAATAAAATA+AGG - chr8_4:48259090-48259109 Msa1329580:intron 5.0%
!!! TTATTTATTTTATTCATATT+TGG + chr8_4:48259086-48259105 None:intergenic 5.0%
!! TGAATAAAATAAATAAAATA+AGG - chr8_4:48259090-48259109 Msa1329580:intron 5.0%
AGTGAGTGAGAGAGGGTTTG+AGG + chr8_4:48258138-48258157 None:intergenic 50.0%
AACCACCTCACCATCAACTC+CGG - chr8_4:48258310-48258329 Msa1329580:three_prime_UTR 50.0%
GTTGTTGGTGTGGTTGTAGG+AGG + chr8_4:48258371-48258390 None:intergenic 50.0%
!! GGTGTTGTTGGTGTGGTTGT+AGG + chr8_4:48258374-48258393 None:intergenic 50.0%
GCAGCTGGAGGAGATGATTT+GGG + chr8_4:48258413-48258432 None:intergenic 50.0%
AGCAGCTGGAGGAGATGATT+TGG + chr8_4:48258414-48258433 None:intergenic 50.0%
GATTTGACAGGAACTGGTGC+TGG + chr8_4:48258506-48258525 None:intergenic 50.0%
GGTGGTGATTTGACAGGAAC+TGG + chr8_4:48258512-48258531 None:intergenic 50.0%
!! TTCTTTCCCTTGCTTGGTGC+TGG + chr8_4:48258611-48258630 None:intergenic 50.0%
AGGAGCTTGAAGATGCTAGG+AGG - chr8_4:48259632-48259651 Msa1329580:CDS 50.0%
!! TAGGAGGCTTAGCTTTGAGC+TGG - chr8_4:48259648-48259667 Msa1329580:CDS 50.0%
!! AGGCTTAGCTTTGAGCTGGA+TGG - chr8_4:48259652-48259671 Msa1329580:CDS 50.0%
AGTGAGTGAGAGAGGGTTTG+AGG + chr8_4:48258138-48258157 None:intergenic 50.0%
AACCACCTCACCATCAACTC+CGG - chr8_4:48258310-48258329 Msa1329580:three_prime_UTR 50.0%
GTTGTTGGTGTGGTTGTAGG+AGG + chr8_4:48258371-48258390 None:intergenic 50.0%
!! GGTGTTGTTGGTGTGGTTGT+AGG + chr8_4:48258374-48258393 None:intergenic 50.0%
GCAGCTGGAGGAGATGATTT+GGG + chr8_4:48258413-48258432 None:intergenic 50.0%
AGCAGCTGGAGGAGATGATT+TGG + chr8_4:48258414-48258433 None:intergenic 50.0%
GATTTGACAGGAACTGGTGC+TGG + chr8_4:48258506-48258525 None:intergenic 50.0%
GGTGGTGATTTGACAGGAAC+TGG + chr8_4:48258512-48258531 None:intergenic 50.0%
!! TTCTTTCCCTTGCTTGGTGC+TGG + chr8_4:48258611-48258630 None:intergenic 50.0%
AGGAGCTTGAAGATGCTAGG+AGG - chr8_4:48259632-48259651 Msa1329580:CDS 50.0%
!! TAGGAGGCTTAGCTTTGAGC+TGG - chr8_4:48259648-48259667 Msa1329580:CDS 50.0%
!! AGGCTTAGCTTTGAGCTGGA+TGG - chr8_4:48259652-48259671 Msa1329580:CDS 50.0%
!! GGAGTTGATGGTGAGGTGGT+TGG + chr8_4:48258311-48258330 None:intergenic 55.0%
AGATGCAACAGGAGTGGTGG+CGG + chr8_4:48258336-48258355 None:intergenic 55.0%
CACCACTCCTGTTGCATCTC+CGG - chr8_4:48258337-48258356 Msa1329580:three_prime_UTR 55.0%
TACCGGAGATGCAACAGGAG+TGG + chr8_4:48258342-48258361 None:intergenic 55.0%
!! GTTGTAGGAGGTGCTGCTAC+CGG + chr8_4:48258359-48258378 None:intergenic 55.0%
! TTGACAGGAACTGGTGCTGG+TGG + chr8_4:48258503-48258522 None:intergenic 55.0%
GGTGTGGGTGGTGATTTGAC+AGG + chr8_4:48258518-48258537 None:intergenic 55.0%
GAGCTGACTGGAGTAGGTGT+GGG + chr8_4:48258533-48258552 None:intergenic 55.0%
TGAGCTGACTGGAGTAGGTG+TGG + chr8_4:48258534-48258553 None:intergenic 55.0%
ACCACCAGCAGTAACACCTG+TGG - chr8_4:48258553-48258572 Msa1329580:intron 55.0%
!! AACAACGCTGGTGATGGTGC+TGG + chr8_4:48258653-48258672 None:intergenic 55.0%
AGCACCATCACCAGCGTTGT+TGG - chr8_4:48258652-48258671 Msa1329580:intron 55.0%
GCACCATCACCAGCGTTGTT+GGG - chr8_4:48258653-48258672 Msa1329580:intron 55.0%
TCATCGTTCGCGGTAGAAGC+GGG + chr8_4:48258737-48258756 None:intergenic 55.0%
CTCATCGTTCGCGGTAGAAG+CGG + chr8_4:48258738-48258757 None:intergenic 55.0%
TACACCGAACCCACCGTCAA+TGG + chr8_4:48258927-48258946 None:intergenic 55.0%
!! ATTGACGGTGGGTTCGGTGT+AGG - chr8_4:48258926-48258945 Msa1329580:intron 55.0%
!! GGAGTTGATGGTGAGGTGGT+TGG + chr8_4:48258311-48258330 None:intergenic 55.0%
AGATGCAACAGGAGTGGTGG+CGG + chr8_4:48258336-48258355 None:intergenic 55.0%
CACCACTCCTGTTGCATCTC+CGG - chr8_4:48258337-48258356 Msa1329580:three_prime_UTR 55.0%
TACCGGAGATGCAACAGGAG+TGG + chr8_4:48258342-48258361 None:intergenic 55.0%
!! GTTGTAGGAGGTGCTGCTAC+CGG + chr8_4:48258359-48258378 None:intergenic 55.0%
! TTGACAGGAACTGGTGCTGG+TGG + chr8_4:48258503-48258522 None:intergenic 55.0%
GGTGTGGGTGGTGATTTGAC+AGG + chr8_4:48258518-48258537 None:intergenic 55.0%
GAGCTGACTGGAGTAGGTGT+GGG + chr8_4:48258533-48258552 None:intergenic 55.0%
TGAGCTGACTGGAGTAGGTG+TGG + chr8_4:48258534-48258553 None:intergenic 55.0%
ACCACCAGCAGTAACACCTG+TGG - chr8_4:48258553-48258572 Msa1329580:intron 55.0%
!! AACAACGCTGGTGATGGTGC+TGG + chr8_4:48258653-48258672 None:intergenic 55.0%
AGCACCATCACCAGCGTTGT+TGG - chr8_4:48258652-48258671 Msa1329580:intron 55.0%
GCACCATCACCAGCGTTGTT+GGG - chr8_4:48258653-48258672 Msa1329580:intron 55.0%
TCATCGTTCGCGGTAGAAGC+GGG + chr8_4:48258737-48258756 None:intergenic 55.0%
CTCATCGTTCGCGGTAGAAG+CGG + chr8_4:48258738-48258757 None:intergenic 55.0%
TACACCGAACCCACCGTCAA+TGG + chr8_4:48258927-48258946 None:intergenic 55.0%
!! ATTGACGGTGGGTTCGGTGT+AGG - chr8_4:48258926-48258945 Msa1329580:intron 55.0%
TGCATTATCGTCGCCGGCGT+CGG - chr8_4:48258263-48258282 Msa1329580:three_prime_UTR 60.0%
TTGGTGCAGCGGAAGGTGAC+TGG + chr8_4:48258292-48258311 None:intergenic 60.0%
! TGGTGAGGTGGTTGGTGCAG+CGG + chr8_4:48258303-48258322 None:intergenic 60.0%
CGGAGATGCAACAGGAGTGG+TGG + chr8_4:48258339-48258358 None:intergenic 60.0%
GCTGCTACCGGAGATGCAAC+AGG + chr8_4:48258347-48258366 None:intergenic 60.0%
!! GGGAGCTGGTGTTGTTGGTG+TGG + chr8_4:48258381-48258400 None:intergenic 60.0%
!! GCAACGGGAGCTGGTGTTGT+TGG + chr8_4:48258386-48258405 None:intergenic 60.0%
TTGGGAGAAGCAACGGGAGC+TGG + chr8_4:48258395-48258414 None:intergenic 60.0%
TGCTCCGGCAACCAAACCTC+CGG - chr8_4:48258439-48258458 Msa1329580:three_prime_UTR 60.0%
! TGGTGATGCTGCCGGAGGTT+TGG + chr8_4:48258453-48258472 None:intergenic 60.0%
!! ACAGGAACTGGTGCTGGTGG+TGG + chr8_4:48258500-48258519 None:intergenic 60.0%
CTGACTGGAGTAGGTGTGGG+TGG + chr8_4:48258530-48258549 None:intergenic 60.0%
GGTGGTGAGCTGACTGGAGT+AGG + chr8_4:48258539-48258558 None:intergenic 60.0%
! ACTGCTGGTGGTGAGCTGAC+TGG + chr8_4:48258545-48258564 None:intergenic 60.0%
!! GCCACAGGTGTTACTGCTGG+TGG + chr8_4:48258557-48258576 None:intergenic 60.0%
!! GCAGCCACAGGTGTTACTGC+TGG + chr8_4:48258560-48258579 None:intergenic 60.0%
TGCTCCAACCACCACACCAG+CGG - chr8_4:48258577-48258596 Msa1329580:intron 60.0%
TCCAGCTCCAGCACCAAGCA+AGG - chr8_4:48258601-48258620 Msa1329580:intron 60.0%
CCAGCTCCAGCACCAAGCAA+GGG - chr8_4:48258602-48258621 Msa1329580:intron 60.0%
GGACCCAACAACGCTGGTGA+TGG + chr8_4:48258659-48258678 None:intergenic 60.0%
CCTGCATCTTCGCTTGGTCC+AGG + chr8_4:48258704-48258723 None:intergenic 60.0%
CCTGGACCAAGCGAAGATGC+AGG - chr8_4:48258701-48258720 Msa1329580:intron 60.0%
GGTGCTCCTGCATCTTCGCT+TGG + chr8_4:48258710-48258729 None:intergenic 60.0%
!! AGCGAAGATGCAGGAGCACC+TGG - chr8_4:48258710-48258729 Msa1329580:intron 60.0%
CGCTTCTACCGCGAACGATG+AGG - chr8_4:48258736-48258755 Msa1329580:intron 60.0%
! GCCACCATTGACGGTGGGTT+CGG - chr8_4:48258920-48258939 Msa1329580:intron 60.0%
ACCGAACCCACCGTCAATGG+TGG + chr8_4:48258924-48258943 None:intergenic 60.0%
TGCATTATCGTCGCCGGCGT+CGG - chr8_4:48258263-48258282 Msa1329580:three_prime_UTR 60.0%
TTGGTGCAGCGGAAGGTGAC+TGG + chr8_4:48258292-48258311 None:intergenic 60.0%
! TGGTGAGGTGGTTGGTGCAG+CGG + chr8_4:48258303-48258322 None:intergenic 60.0%
CGGAGATGCAACAGGAGTGG+TGG + chr8_4:48258339-48258358 None:intergenic 60.0%
GCTGCTACCGGAGATGCAAC+AGG + chr8_4:48258347-48258366 None:intergenic 60.0%
!! GGGAGCTGGTGTTGTTGGTG+TGG + chr8_4:48258381-48258400 None:intergenic 60.0%
!! GCAACGGGAGCTGGTGTTGT+TGG + chr8_4:48258386-48258405 None:intergenic 60.0%
TTGGGAGAAGCAACGGGAGC+TGG + chr8_4:48258395-48258414 None:intergenic 60.0%
TGCTCCGGCAACCAAACCTC+CGG - chr8_4:48258439-48258458 Msa1329580:three_prime_UTR 60.0%
! TGGTGATGCTGCCGGAGGTT+TGG + chr8_4:48258453-48258472 None:intergenic 60.0%
!! ACAGGAACTGGTGCTGGTGG+TGG + chr8_4:48258500-48258519 None:intergenic 60.0%
CTGACTGGAGTAGGTGTGGG+TGG + chr8_4:48258530-48258549 None:intergenic 60.0%
GGTGGTGAGCTGACTGGAGT+AGG + chr8_4:48258539-48258558 None:intergenic 60.0%
! ACTGCTGGTGGTGAGCTGAC+TGG + chr8_4:48258545-48258564 None:intergenic 60.0%
!! GCCACAGGTGTTACTGCTGG+TGG + chr8_4:48258557-48258576 None:intergenic 60.0%
!! GCAGCCACAGGTGTTACTGC+TGG + chr8_4:48258560-48258579 None:intergenic 60.0%
TGCTCCAACCACCACACCAG+CGG - chr8_4:48258577-48258596 Msa1329580:intron 60.0%
TCCAGCTCCAGCACCAAGCA+AGG - chr8_4:48258601-48258620 Msa1329580:intron 60.0%
CCAGCTCCAGCACCAAGCAA+GGG - chr8_4:48258602-48258621 Msa1329580:intron 60.0%
GGACCCAACAACGCTGGTGA+TGG + chr8_4:48258659-48258678 None:intergenic 60.0%
CCTGCATCTTCGCTTGGTCC+AGG + chr8_4:48258704-48258723 None:intergenic 60.0%
CCTGGACCAAGCGAAGATGC+AGG - chr8_4:48258701-48258720 Msa1329580:intron 60.0%
GGTGCTCCTGCATCTTCGCT+TGG + chr8_4:48258710-48258729 None:intergenic 60.0%
!! AGCGAAGATGCAGGAGCACC+TGG - chr8_4:48258710-48258729 Msa1329580:intron 60.0%
CGCTTCTACCGCGAACGATG+AGG - chr8_4:48258736-48258755 Msa1329580:intron 60.0%
! GCCACCATTGACGGTGGGTT+CGG - chr8_4:48258920-48258939 Msa1329580:intron 60.0%
ACCGAACCCACCGTCAATGG+TGG + chr8_4:48258924-48258943 None:intergenic 60.0%
! ATTATCGTCGCCGGCGTCGG+AGG - chr8_4:48258266-48258285 Msa1329580:three_prime_UTR 65.0%
! GAGGTGGTTGGTGCAGCGGA+AGG + chr8_4:48258299-48258318 None:intergenic 65.0%
!! GGCCGGAGTTGATGGTGAGG+TGG + chr8_4:48258315-48258334 None:intergenic 65.0%
TCCAGCTGCTGCACCTGCTC+CGG - chr8_4:48258424-48258443 Msa1329580:three_prime_UTR 65.0%
! GGAGGTTTGGTTGCCGGAGC+AGG + chr8_4:48258440-48258459 None:intergenic 65.0%
! GCTGCCGGAGGTTTGGTTGC+CGG + chr8_4:48258446-48258465 None:intergenic 65.0%
ACCTCCGGCAGCATCACCAC+CGG - chr8_4:48258454-48258473 Msa1329580:three_prime_UTR 65.0%
!! GTGCTGACTGGTGTCACCGC+CGG + chr8_4:48258476-48258495 None:intergenic 65.0%
!! GCTGGTGGTGGAGTGCTGAC+TGG + chr8_4:48258488-48258507 None:intergenic 65.0%
GTGGTGGTTGGAGCAGCCAC+AGG + chr8_4:48258572-48258591 None:intergenic 65.0%
GGAACCGCTGGTGTGGTGGT+TGG + chr8_4:48258584-48258603 None:intergenic 65.0%
AGCTGGAACCGCTGGTGTGG+TGG + chr8_4:48258588-48258607 None:intergenic 65.0%
TGGAGCTGGAACCGCTGGTG+TGG + chr8_4:48258591-48258610 None:intergenic 65.0%
!! CCCTTGCTTGGTGCTGGAGC+TGG + chr8_4:48258605-48258624 None:intergenic 65.0%
! GCTGGTGGACCCAACAACGC+TGG + chr8_4:48258665-48258684 None:intergenic 65.0%
CTTGGTCCAGGTGCTCCTGC+TGG + chr8_4:48258692-48258711 None:intergenic 65.0%
TTCGCGGTAGAAGCGGGTCC+AGG + chr8_4:48258731-48258750 None:intergenic 65.0%
GTGCCACGCGCCACCATTGA+CGG - chr8_4:48258911-48258930 Msa1329580:intron 65.0%
CACGCGCCACCATTGACGGT+GGG - chr8_4:48258915-48258934 Msa1329580:intron 65.0%
! ATTATCGTCGCCGGCGTCGG+AGG - chr8_4:48258266-48258285 Msa1329580:three_prime_UTR 65.0%
! GAGGTGGTTGGTGCAGCGGA+AGG + chr8_4:48258299-48258318 None:intergenic 65.0%
!! GGCCGGAGTTGATGGTGAGG+TGG + chr8_4:48258315-48258334 None:intergenic 65.0%
TCCAGCTGCTGCACCTGCTC+CGG - chr8_4:48258424-48258443 Msa1329580:three_prime_UTR 65.0%
! GGAGGTTTGGTTGCCGGAGC+AGG + chr8_4:48258440-48258459 None:intergenic 65.0%
! GCTGCCGGAGGTTTGGTTGC+CGG + chr8_4:48258446-48258465 None:intergenic 65.0%
ACCTCCGGCAGCATCACCAC+CGG - chr8_4:48258454-48258473 Msa1329580:three_prime_UTR 65.0%
!! GTGCTGACTGGTGTCACCGC+CGG + chr8_4:48258476-48258495 None:intergenic 65.0%
!! GCTGGTGGTGGAGTGCTGAC+TGG + chr8_4:48258488-48258507 None:intergenic 65.0%
GTGGTGGTTGGAGCAGCCAC+AGG + chr8_4:48258572-48258591 None:intergenic 65.0%
GGAACCGCTGGTGTGGTGGT+TGG + chr8_4:48258584-48258603 None:intergenic 65.0%
AGCTGGAACCGCTGGTGTGG+TGG + chr8_4:48258588-48258607 None:intergenic 65.0%
TGGAGCTGGAACCGCTGGTG+TGG + chr8_4:48258591-48258610 None:intergenic 65.0%
!! CCCTTGCTTGGTGCTGGAGC+TGG + chr8_4:48258605-48258624 None:intergenic 65.0%
! GCTGGTGGACCCAACAACGC+TGG + chr8_4:48258665-48258684 None:intergenic 65.0%
CTTGGTCCAGGTGCTCCTGC+TGG + chr8_4:48258692-48258711 None:intergenic 65.0%
TTCGCGGTAGAAGCGGGTCC+AGG + chr8_4:48258731-48258750 None:intergenic 65.0%
GTGCCACGCGCCACCATTGA+CGG - chr8_4:48258911-48258930 Msa1329580:intron 65.0%
CACGCGCCACCATTGACGGT+GGG - chr8_4:48258915-48258934 Msa1329580:intron 65.0%
!! AGGTGACTGGCCTCCGACGC+CGG + chr8_4:48258279-48258298 None:intergenic 70.0%
!! GGCGGCCGGAGTTGATGGTG+AGG + chr8_4:48258318-48258337 None:intergenic 70.0%
!! GTGGTGGCGGCCGGAGTTGA+TGG + chr8_4:48258323-48258342 None:intergenic 70.0%
!! GCAACAGGAGTGGTGGCGGC+CGG + chr8_4:48258332-48258351 None:intergenic 70.0%
GGAGCAGGTGCAGCAGCTGG+AGG + chr8_4:48258425-48258444 None:intergenic 70.0%
TCCGGCAGCATCACCACCGG+CGG - chr8_4:48258457-48258476 Msa1329580:three_prime_UTR 70.0%
! ACCGCCGGTGGTGATGCTGC+CGG + chr8_4:48258461-48258480 None:intergenic 70.0%
!! CTGACTGGTGTCACCGCCGG+TGG + chr8_4:48258473-48258492 None:intergenic 70.0%
! GGTGCTGGAGCTGGAACCGC+TGG + chr8_4:48258596-48258615 None:intergenic 70.0%
GGTCCACCAGCACCACCAGC+AGG - chr8_4:48258674-48258693 Msa1329580:intron 70.0%
! GCTCCTGCTGGTGGTGCTGG+TGG + chr8_4:48258680-48258699 None:intergenic 70.0%
! GGTGCTCCTGCTGGTGGTGC+TGG + chr8_4:48258683-48258702 None:intergenic 70.0%
!! GCACCACCAGCAGGAGCACC+TGG - chr8_4:48258683-48258702 Msa1329580:intron 70.0%
GGTCCAGGTGCTCCTGCTGG+TGG + chr8_4:48258689-48258708 None:intergenic 70.0%
! CCACCGTCAATGGTGGCGCG+TGG + chr8_4:48258917-48258936 None:intergenic 70.0%
CCACGCGCCACCATTGACGG+TGG - chr8_4:48258914-48258933 Msa1329580:intron 70.0%
!! AGGTGACTGGCCTCCGACGC+CGG + chr8_4:48258279-48258298 None:intergenic 70.0%
!! GGCGGCCGGAGTTGATGGTG+AGG + chr8_4:48258318-48258337 None:intergenic 70.0%
!! GTGGTGGCGGCCGGAGTTGA+TGG + chr8_4:48258323-48258342 None:intergenic 70.0%
!! GCAACAGGAGTGGTGGCGGC+CGG + chr8_4:48258332-48258351 None:intergenic 70.0%
GGAGCAGGTGCAGCAGCTGG+AGG + chr8_4:48258425-48258444 None:intergenic 70.0%
TCCGGCAGCATCACCACCGG+CGG - chr8_4:48258457-48258476 Msa1329580:three_prime_UTR 70.0%
! ACCGCCGGTGGTGATGCTGC+CGG + chr8_4:48258461-48258480 None:intergenic 70.0%
!! CTGACTGGTGTCACCGCCGG+TGG + chr8_4:48258473-48258492 None:intergenic 70.0%
! GGTGCTGGAGCTGGAACCGC+TGG + chr8_4:48258596-48258615 None:intergenic 70.0%
GGTCCACCAGCACCACCAGC+AGG - chr8_4:48258674-48258693 Msa1329580:intron 70.0%
! GCTCCTGCTGGTGGTGCTGG+TGG + chr8_4:48258680-48258699 None:intergenic 70.0%
! GGTGCTCCTGCTGGTGGTGC+TGG + chr8_4:48258683-48258702 None:intergenic 70.0%
!! GCACCACCAGCAGGAGCACC+TGG - chr8_4:48258683-48258702 Msa1329580:intron 70.0%
GGTCCAGGTGCTCCTGCTGG+TGG + chr8_4:48258689-48258708 None:intergenic 70.0%
! CCACCGTCAATGGTGGCGCG+TGG + chr8_4:48258917-48258936 None:intergenic 70.0%
CCACGCGCCACCATTGACGG+TGG - chr8_4:48258914-48258933 Msa1329580:intron 70.0%
GCCGGAGCAGGTGCAGCAGC+TGG + chr8_4:48258428-48258447 None:intergenic 75.0%
! GCCGGTGGTGATGCTGCCGG+AGG + chr8_4:48258458-48258477 None:intergenic 75.0%
GCCGGAGCAGGTGCAGCAGC+TGG + chr8_4:48258428-48258447 None:intergenic 75.0%
! GCCGGTGGTGATGCTGCCGG+AGG + chr8_4:48258458-48258477 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 48258075 48260109 48258075 ID=Msa1329580;Name=Msa1329580
chr8_4 mRNA 48258075 48260109 48258075 ID=Msa1329580-mRNA-1;Parent=Msa1329580;Name=Msa1329580-mRNA-1;_AED=0.04;_eAED=0.04;_QI=152|1|1|1|1|1|2|415|203
chr8_4 exon 48258075 48258570 48258075 ID=Msa1329580-mRNA-1:exon:13855;Parent=Msa1329580-mRNA-1
chr8_4 exon 48259427 48260109 48259427 ID=Msa1329580-mRNA-1:exon:13854;Parent=Msa1329580-mRNA-1
chr8_4 five_prime_UTR 48259958 48260109 48259958 ID=Msa1329580-mRNA-1:five_prime_utr;Parent=Msa1329580-mRNA-1
chr8_4 CDS 48259427 48259957 48259427 ID=Msa1329580-mRNA-1:cds;Parent=Msa1329580-mRNA-1
chr8_4 CDS 48258490 48258570 48258490 ID=Msa1329580-mRNA-1:cds;Parent=Msa1329580-mRNA-1
chr8_4 three_prime_UTR 48258075 48258489 48258075 ID=Msa1329580-mRNA-1:three_prime_utr;Parent=Msa1329580-mRNA-1
Gene Sequence

>Msa1329580

ATGGATCGTAACAATCTCTTCACCCTCGCATTCATCTGCATTATCGTCGCCGGCGTCGGAGGCCAGTCACCTTCCGCTGCACCAACCACCTCACCATCAACTCCGGCCGCCACCACTCCTGTTGCATCTCCGGTAGCAGCACCTCCTACAACCACACCAACAACACCAGCTCCCGTTGCTTCTCCCAAATCATCTCCTCCAGCTGCTGCACCTGCTCCGGCAACCAAACCTCCGGCAGCATCACCACCGGCGGTGACACCAGTCAGCACTCCACCACCAGCACCAGTTCCTGTCAAATCACCACCCACACCTACTCCAGTCAGCTCACCACCAGCAGTAACACCTGTGGCTGCTCCAACCACCACACCAGCGGTTCCAGCTCCAGCACCAAGCAAGGGAAAGAAGAACAAGAAGCACGGTGCTCCAGCACCATCACCAGCGTTGTTGGGTCCACCAGCACCACCAGCAGGAGCACCTGGACCAAGCGAAGATGCAGGAGCACCTGGACCCGCTTCTACCGCGAACGATGAGAGTGGAGCAGAAACTATCAGGAGCTTGAAGATGCTAGGAGGCTTAGCTTTGAGCTGGATGGCTGTTGTTTTATTCTTCTAG
Protein sequence

>Msa1329580

MDRNNLFTLAFICIIVAGVGGQSPSAAPTTSPSTPAATTPVASPVAAPPTTTPTTPAPVASPKSSPPAAAPAPATKPPAASPPAVTPVSTPPPAPVPVKSPPTPTPVSSPPAVTPVAAPTTTPAVPAPAPSKGKKNKKHGAPAPSPALLGPPAPPAGAPGPSEDAGAPGPASTANDESGAETIRSLKMLGGLALSWMAVVLFF*