AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1329350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329350 MtrunA17_Chr4g0053731 88.462 208 18 3 1 203 1 207 4.15e-75 225
Msa1329350 MtrunA17_Chr5g0401591 49.393 247 58 10 1 203 1 224 6.69e-20 84.0
Msa1329350 MtrunA17_Chr7g0235881 45.902 122 58 4 1 121 1 115 1.39e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329350 AT4G37450.1 58.333 72 22 3 1 64 1 72 8.83e-13 65.1
Msa1329350 AT4G37450.2 58.333 72 22 3 1 64 70 141 1.80e-12 65.1

Find 104 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTATAGATATATAAATTT+TGG 0.155194 8_4:+47927788 Msa1329350:three_prime_UTR
CAAACTTTCAACTTTCAATA+TGG 0.214473 8_4:+47925972 Msa1329350:exon
CCCTTGCTTGGTGCTGGAGC+TGG 0.249954 8_4:-47926366 None:intergenic
TTCTTTCCCTTGCTTGGTGC+TGG 0.263309 8_4:-47926372 None:intergenic
GGTGTTGTTGGTGTGGTTGT+AGG 0.304465 8_4:-47926135 None:intergenic
GGTGCTCCTGCTGGTGGTGC+TGG 0.331916 8_4:-47926444 None:intergenic
AATGCTAGATATCAGAATAA+TGG 0.353155 8_4:-47927683 None:intergenic
AGCAGCTGGAGGAGATGATT+TGG 0.353606 8_4:-47926175 None:intergenic
AGTGAGTGAGAGAGGGTTTG+AGG 0.359174 8_4:-47925899 None:intergenic
TTGTTCTTCTTTCCCTTGCT+TGG 0.362413 8_4:-47926378 None:intergenic
GGAGGTTTGGTTGCCGGAGC+AGG 0.362636 8_4:-47926201 None:intergenic
GTGGTGGCGGCCGGAGTTGA+TGG 0.392958 8_4:-47926084 None:intergenic
CACCACTCCTGTTGCATCTC+CGG 0.398121 8_4:+47926101 Msa1329350:CDS
AGAGTGGAGCAGAAACTATC+AGG 0.404075 8_4:+47927376 Msa1329350:intron
GCTGCCGGAGGTTTGGTTGC+CGG 0.408047 8_4:-47926207 None:intergenic
GCACCACCAGCAGGAGCACC+TGG 0.414679 8_4:+47926447 Msa1329350:CDS
CCTGCATCTTCGCTTGGTCC+AGG 0.415878 8_4:-47926465 None:intergenic
GCTGGTGGTGGAGTGCTGAC+TGG 0.421414 8_4:-47926249 None:intergenic
GGTGGTGAGCTGACTGGAGC+AGG 0.426318 8_4:-47926300 None:intergenic
GTGCGATGAAAGGTTTATAT+AGG 0.426969 8_4:-47925872 None:intergenic
GCCGGAGCAGGTGCAGCAGC+TGG 0.433970 8_4:-47926189 None:intergenic
AGAGAAAGAGTGAGTGAGAG+AGG 0.435994 8_4:-47925907 None:intergenic
AGCACCATCACCAGCGTTGT+TGG 0.436518 8_4:+47926416 Msa1329350:CDS
GCACCATCACCAGCGTTGTT+GGG 0.436941 8_4:+47926417 Msa1329350:CDS
GCAGCTGGAGGAGATGATTT+GGG 0.439226 8_4:-47926174 None:intergenic
GGTGCTGGAGCTGGAACCGC+TGG 0.440384 8_4:-47926357 None:intergenic
AAGATTTACCTCATCGTTCG+CGG 0.444163 8_4:-47926508 None:intergenic
TGCATTATCGTCGCCGGCGT+CGG 0.448153 8_4:+47926027 Msa1329350:CDS
GCTCCTGCTGGTGGTGCTGG+TGG 0.457667 8_4:-47926441 None:intergenic
TCCAGCTGCTGCACCTGCTC+CGG 0.458206 8_4:+47926188 Msa1329350:CDS
CTTGGTCCAGGTGCTCCTGC+TGG 0.461592 8_4:-47926453 None:intergenic
TGGTGATGCTGCCGGAGGTT+TGG 0.463953 8_4:-47926214 None:intergenic
TTGGGAGAAGCAACGGGAGC+TGG 0.468676 8_4:-47926156 None:intergenic
GAGCTGACTGGAGCAGGTGT+GGG 0.472900 8_4:-47926294 None:intergenic
AAATGCGAGCTTACAAATTG+AGG 0.475190 8_4:-47927856 None:intergenic
ACAGGAACTGGTGCTGGTGG+TGG 0.475601 8_4:-47926261 None:intergenic
ACTGCTGGTGGTGAGCTGAC+TGG 0.475791 8_4:-47926306 None:intergenic
AGGCTTAGCTTTGAGCTGGA+TGG 0.476021 8_4:+47927416 Msa1329350:CDS
GGTGGTGATTTGACAGGAAC+TGG 0.477818 8_4:-47926273 None:intergenic
AATGCGAGCTTACAAATTGA+GGG 0.479342 8_4:-47927855 None:intergenic
GGTGCTCCTGCATCTTCGCT+TGG 0.481476 8_4:-47926471 None:intergenic
AGCGAAGATGCAGGAGCACC+TGG 0.485174 8_4:+47926474 Msa1329350:CDS
TGAGCTGACTGGAGCAGGTG+TGG 0.488282 8_4:-47926295 None:intergenic
CTCATCGTTCGCGGTAGAAG+CGG 0.489228 8_4:-47926499 None:intergenic
GCAACGGGAGCTGGTGTTGT+TGG 0.490912 8_4:-47926147 None:intergenic
GATGATTTGGGAGAAGCAAC+GGG 0.491381 8_4:-47926162 None:intergenic
TTGGTGCAGCGGAAGGTGAC+TGG 0.491418 8_4:-47926053 None:intergenic
GTGAGTATGTGACTGCTTGA+CGG 0.492797 8_4:+47927740 Msa1329350:three_prime_UTR
GCTGCTACCGGAGATGCAAC+AGG 0.501881 8_4:-47926108 None:intergenic
GCAACAGGAGTGGTGGCGGC+CGG 0.507920 8_4:-47926093 None:intergenic
TCCAGCTCCAGCACCAAGCA+AGG 0.510907 8_4:+47926365 Msa1329350:CDS
GGAGTTGATGGTGAGGTGGT+TGG 0.517435 8_4:-47926072 None:intergenic
GTGGTGGTTGGAGCAGCCAC+AGG 0.519021 8_4:-47926333 None:intergenic
CCTGGACCAAGCGAAGATGC+AGG 0.520602 8_4:+47926465 Msa1329350:CDS
GGTCCAGGTGCTCCTGCTGG+TGG 0.523649 8_4:-47926450 None:intergenic
AGGACTTTGATGTTATTTGA+CGG 0.525183 8_4:-47925852 None:intergenic
AGCTGGAACCGCTGGTGTGG+TGG 0.532724 8_4:-47926349 None:intergenic
AGAGTGTGATAATAAGATCA+AGG 0.533089 8_4:-47927472 None:intergenic
GGAACCGCTGGTGTGGTGGT+TGG 0.535849 8_4:-47926345 None:intergenic
TTGAGGAACTGTGCGATGAA+AGG 0.537713 8_4:-47925882 None:intergenic
AACCACCTCACCATCAACTC+CGG 0.540937 8_4:+47926074 Msa1329350:CDS
AGATGATTTGGGAGAAGCAA+CGG 0.541525 8_4:-47926163 None:intergenic
GAGGTGGTTGGTGCAGCGGA+AGG 0.541625 8_4:-47926060 None:intergenic
AACAACGCTGGTGATGGTGC+TGG 0.542731 8_4:-47926414 None:intergenic
AGATGCAACAGGAGTGGTGG+CGG 0.543847 8_4:-47926097 None:intergenic
GTTGTTGGTGTGGTTGTAGG+AGG 0.547446 8_4:-47926132 None:intergenic
GAGAAAGAGTGAGTGAGAGA+GGG 0.548946 8_4:-47925906 None:intergenic
TAGGAGGCTTAGCTTTGAGC+TGG 0.549247 8_4:+47927412 Msa1329350:CDS
TGGAGCTGGAACCGCTGGTG+TGG 0.549390 8_4:-47926352 None:intergenic
GGTCCACCAGCACCACCAGC+AGG 0.553644 8_4:+47926438 Msa1329350:CDS
GGAGCAGGTGCAGCAGCTGG+AGG 0.554589 8_4:-47926186 None:intergenic
TTCATCTGCATTATCGTCGC+CGG 0.560042 8_4:+47926021 Msa1329350:CDS
TGCTCCGGCAACCAAACCTC+CGG 0.560313 8_4:+47926203 Msa1329350:CDS
CTGACTGGAGCAGGTGTGGG+TGG 0.564849 8_4:-47926291 None:intergenic
GGCCGGAGTTGATGGTGAGG+TGG 0.565131 8_4:-47926076 None:intergenic
ACCTCCGGCAGCATCACCAC+CGG 0.566788 8_4:+47926218 Msa1329350:CDS
GGACCCAACAACGCTGGTGA+TGG 0.568484 8_4:-47926420 None:intergenic
GATTTGACAGGAACTGGTGC+TGG 0.568714 8_4:-47926267 None:intergenic
ATTATCGTCGCCGGCGTCGG+TGG 0.572475 8_4:+47926030 Msa1329350:CDS
GCAGCCACAGGTGTTACTGC+TGG 0.577094 8_4:-47926321 None:intergenic
CGGAGATGCAACAGGAGTGG+TGG 0.583940 8_4:-47926100 None:intergenic
GTTGTAGGAGGTGCTGCTAC+CGG 0.584827 8_4:-47926120 None:intergenic
ATAGTATCATAGATGTCTCA+AGG 0.606965 8_4:-47927592 None:intergenic
TGCTCCAACCACCACACCAG+CGG 0.608500 8_4:+47926341 Msa1329350:CDS
TGGTGAGGTGGTTGGTGCAG+CGG 0.610327 8_4:-47926064 None:intergenic
GGGAGCTGGTGTTGTTGGTG+TGG 0.611766 8_4:-47926142 None:intergenic
TTGACAGGAACTGGTGCTGG+TGG 0.617477 8_4:-47926264 None:intergenic
CGATAATGCAGATGAATGCG+AGG 0.621043 8_4:-47926014 None:intergenic
GCCGGTGGTGATGCTGCCGG+AGG 0.626872 8_4:-47926219 None:intergenic
ATCAGGAGCTTGAAGATGCT+AGG 0.627021 8_4:+47927393 Msa1329350:CDS
CTGACTGGTGTCACCGCCGG+TGG 0.627806 8_4:-47926234 None:intergenic
GGCGGCCGGAGTTGATGGTG+AGG 0.629145 8_4:-47926079 None:intergenic
TACCGGAGATGCAACAGGAG+TGG 0.639684 8_4:-47926103 None:intergenic
GGAAAGAAGAACAAGAAGCA+CGG 0.641441 8_4:+47926387 Msa1329350:CDS
CCAGCTCCAGCACCAAGCAA+GGG 0.643686 8_4:+47926366 Msa1329350:CDS
GGTGTGGGTGGTGATTTGAC+AGG 0.655827 8_4:-47926279 None:intergenic
GCTGGTGGACCCAACAACGC+TGG 0.656094 8_4:-47926426 None:intergenic
CGCTTCTACCGCGAACGATG+AGG 0.660407 8_4:+47926500 Msa1329350:CDS
GCCACAGGTGTTACTGCTGG+TGG 0.660434 8_4:-47926318 None:intergenic
TCCGGCAGCATCACCACCGG+CGG 0.672479 8_4:+47926221 Msa1329350:CDS
AGGAGCTTGAAGATGCTAGG+AGG 0.675654 8_4:+47927396 Msa1329350:CDS
GATAATGCAGATGAATGCGA+GGG 0.678738 8_4:-47926013 None:intergenic
ACTTTGATGTTATTTGACGG+TGG 0.699372 8_4:-47925849 None:intergenic
ACCACCAGCAGTAACACCTG+TGG 0.703069 8_4:+47926317 Msa1329350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAATTTATATTTATAT+TGG - chr8_4:47927178-47927197 None:intergenic 0.0%
!! ATATAAATTTATATTTATAT+TGG - chr8_4:47927178-47927197 None:intergenic 0.0%
!!! TTACTTTCTTTTTAAAATAA+AGG - chr8_4:47926970-47926989 None:intergenic 10.0%
!! AATAAGAAAAAAAAAAAAGA+TGG - chr8_4:47927512-47927531 None:intergenic 10.0%
!!! TTGTATAGATATATAAATTT+TGG + chr8_4:47927788-47927807 Msa1329350:three_prime_UTR 10.0%
!!! TTACTTTCTTTTTAAAATAA+AGG - chr8_4:47926970-47926989 None:intergenic 10.0%
!! AATAAGAAAAAAAAAAAAGA+TGG - chr8_4:47927512-47927531 None:intergenic 10.0%
!!! TTGTATAGATATATAAATTT+TGG + chr8_4:47927788-47927807 Msa1329350:three_prime_UTR 10.0%
!! AAATAAGGTTATAAAGATAA+AGG + chr8_4:47926871-47926890 Msa1329350:intron 15.0%
!! AATAAGGTTATAAAGATAAA+GGG + chr8_4:47926872-47926891 Msa1329350:intron 15.0%
!! TAAATATATTGTTCATACAA+TGG + chr8_4:47927018-47927037 Msa1329350:intron 15.0%
!! AAATAAGGTTATAAAGATAA+AGG + chr8_4:47926871-47926890 Msa1329350:intron 15.0%
!! AATAAGGTTATAAAGATAAA+GGG + chr8_4:47926872-47926891 Msa1329350:intron 15.0%
!! TAAATATATTGTTCATACAA+TGG + chr8_4:47927018-47927037 Msa1329350:intron 15.0%
!!! TTTTATTTTCAGACCTAATA+AGG - chr8_4:47926721-47926740 None:intergenic 20.0%
!!! ATTTTATTCATATTTGGATC+TGG - chr8_4:47926846-47926865 None:intergenic 20.0%
!!! AGAAAATATGTTCATAGTTT+TGG + chr8_4:47926916-47926935 Msa1329350:intron 20.0%
!! TGAATAGTATATGTCTATTT+AGG - chr8_4:47926995-47927014 None:intergenic 20.0%
!! GTATGATTATAAAACAATGA+TGG + chr8_4:47927298-47927317 Msa1329350:intron 20.0%
!! AATGATGGTTTAATGTTAAT+CGG + chr8_4:47927313-47927332 Msa1329350:intron 20.0%
!!! AAGAAATTTCAAGATTTGTT+TGG - chr8_4:47927340-47927359 None:intergenic 20.0%
!!! ATTATTTTTTGAAAATGCTG+TGG + chr8_4:47927628-47927647 Msa1329350:three_prime_UTR 20.0%
!!! TTTTATTTTCAGACCTAATA+AGG - chr8_4:47926721-47926740 None:intergenic 20.0%
!!! ATTTTATTCATATTTGGATC+TGG - chr8_4:47926846-47926865 None:intergenic 20.0%
!!! AGAAAATATGTTCATAGTTT+TGG + chr8_4:47926916-47926935 Msa1329350:intron 20.0%
!! TGAATAGTATATGTCTATTT+AGG - chr8_4:47926995-47927014 None:intergenic 20.0%
!! GTATGATTATAAAACAATGA+TGG + chr8_4:47927298-47927317 Msa1329350:intron 20.0%
!! AATGATGGTTTAATGTTAAT+CGG + chr8_4:47927313-47927332 Msa1329350:intron 20.0%
!!! AAGAAATTTCAAGATTTGTT+TGG - chr8_4:47927340-47927359 None:intergenic 20.0%
!!! ATTATTTTTTGAAAATGCTG+TGG + chr8_4:47927628-47927647 Msa1329350:three_prime_UTR 20.0%
! CAAACTTTCAACTTTCAATA+TGG + chr8_4:47925972-47925991 Msa1329350:exon 25.0%
! ATAGTTAACATAGTACAATG+TGG + chr8_4:47926568-47926587 Msa1329350:intron 25.0%
! CTAACCAAAATCTAAGTTTA+AGG + chr8_4:47926651-47926670 Msa1329350:intron 25.0%
! ACCATAAAAAGAAGAGTAAT+TGG + chr8_4:47926755-47926774 Msa1329350:intron 25.0%
!! ACCAATTACTCTTCTTTTTA+TGG - chr8_4:47926759-47926778 None:intergenic 25.0%
!!! ATGAAATGATGTTAGTTTTC+TGG + chr8_4:47927230-47927249 Msa1329350:intron 25.0%
!!! TCTTATTTTTGGCTATCTTA+TGG + chr8_4:47927525-47927544 Msa1329350:three_prime_UTR 25.0%
!!! CTTATTTTTGGCTATCTTAT+GGG + chr8_4:47927526-47927545 Msa1329350:three_prime_UTR 25.0%
!!! TGTGGTCATTATTTTATTCT+TGG + chr8_4:47927646-47927665 Msa1329350:three_prime_UTR 25.0%
! AATGCTAGATATCAGAATAA+TGG - chr8_4:47927686-47927705 None:intergenic 25.0%
!! TTACAAATTGAGGGATTTTA+CGG - chr8_4:47927849-47927868 None:intergenic 25.0%
! CAAACTTTCAACTTTCAATA+TGG + chr8_4:47925972-47925991 Msa1329350:exon 25.0%
! ATAGTTAACATAGTACAATG+TGG + chr8_4:47926568-47926587 Msa1329350:intron 25.0%
! CTAACCAAAATCTAAGTTTA+AGG + chr8_4:47926651-47926670 Msa1329350:intron 25.0%
! ACCATAAAAAGAAGAGTAAT+TGG + chr8_4:47926755-47926774 Msa1329350:intron 25.0%
!! ACCAATTACTCTTCTTTTTA+TGG - chr8_4:47926759-47926778 None:intergenic 25.0%
!!! ATGAAATGATGTTAGTTTTC+TGG + chr8_4:47927230-47927249 Msa1329350:intron 25.0%
!!! TCTTATTTTTGGCTATCTTA+TGG + chr8_4:47927525-47927544 Msa1329350:three_prime_UTR 25.0%
!!! CTTATTTTTGGCTATCTTAT+GGG + chr8_4:47927526-47927545 Msa1329350:three_prime_UTR 25.0%
!!! TGTGGTCATTATTTTATTCT+TGG + chr8_4:47927646-47927665 Msa1329350:three_prime_UTR 25.0%
! AATGCTAGATATCAGAATAA+TGG - chr8_4:47927686-47927705 None:intergenic 25.0%
!! TTACAAATTGAGGGATTTTA+CGG - chr8_4:47927849-47927868 None:intergenic 25.0%
! AGGACTTTGATGTTATTTGA+CGG - chr8_4:47925855-47925874 None:intergenic 30.0%
! CACACCTTAAACTTAGATTT+TGG - chr8_4:47926658-47926677 None:intergenic 30.0%
TATTCATATTTGGATCTGGA+TGG - chr8_4:47926842-47926861 None:intergenic 30.0%
ATTAACAGTTACTGATGATC+TGG + chr8_4:47927059-47927078 Msa1329350:intron 30.0%
TTAACAGTTACTGATGATCT+GGG + chr8_4:47927060-47927079 Msa1329350:intron 30.0%
!!! TGTTCCATTTTTTTTCAGAG+TGG + chr8_4:47927360-47927379 Msa1329350:intron 30.0%
!! GTTGTTTTATTCTTCTAGTC+TGG + chr8_4:47927441-47927460 Msa1329350:exon 30.0%
AGAGTGTGATAATAAGATCA+AGG - chr8_4:47927475-47927494 None:intergenic 30.0%
ATAGTATCATAGATGTCTCA+AGG - chr8_4:47927595-47927614 None:intergenic 30.0%
! TACAAATTGAGGGATTTTAC+GGG - chr8_4:47927848-47927867 None:intergenic 30.0%
! AGGACTTTGATGTTATTTGA+CGG - chr8_4:47925855-47925874 None:intergenic 30.0%
! CACACCTTAAACTTAGATTT+TGG - chr8_4:47926658-47926677 None:intergenic 30.0%
TATTCATATTTGGATCTGGA+TGG - chr8_4:47926842-47926861 None:intergenic 30.0%
ATTAACAGTTACTGATGATC+TGG + chr8_4:47927059-47927078 Msa1329350:intron 30.0%
TTAACAGTTACTGATGATCT+GGG + chr8_4:47927060-47927079 Msa1329350:intron 30.0%
!!! TGTTCCATTTTTTTTCAGAG+TGG + chr8_4:47927360-47927379 Msa1329350:intron 30.0%
!! GTTGTTTTATTCTTCTAGTC+TGG + chr8_4:47927441-47927460 Msa1329350:exon 30.0%
AGAGTGTGATAATAAGATCA+AGG - chr8_4:47927475-47927494 None:intergenic 30.0%
ATAGTATCATAGATGTCTCA+AGG - chr8_4:47927595-47927614 None:intergenic 30.0%
! TACAAATTGAGGGATTTTAC+GGG - chr8_4:47927848-47927867 None:intergenic 30.0%
! ACTTTGATGTTATTTGACGG+TGG - chr8_4:47925852-47925871 None:intergenic 35.0%
GTGCGATGAAAGGTTTATAT+AGG - chr8_4:47925875-47925894 None:intergenic 35.0%
! AAGATAAAGGGTGTACTATC+TGG + chr8_4:47926884-47926903 Msa1329350:intron 35.0%
! TGCTCCACTCTGAAAAAAAA+TGG - chr8_4:47927367-47927386 None:intergenic 35.0%
! ACTTTGATGTTATTTGACGG+TGG - chr8_4:47925852-47925871 None:intergenic 35.0%
GTGCGATGAAAGGTTTATAT+AGG - chr8_4:47925875-47925894 None:intergenic 35.0%
! AAGATAAAGGGTGTACTATC+TGG + chr8_4:47926884-47926903 Msa1329350:intron 35.0%
! TGCTCCACTCTGAAAAAAAA+TGG - chr8_4:47927367-47927386 None:intergenic 35.0%
GATAATGCAGATGAATGCGA+GGG - chr8_4:47926016-47926035 None:intergenic 40.0%
! AGATGATTTGGGAGAAGCAA+CGG - chr8_4:47926166-47926185 None:intergenic 40.0%
TTGTTCTTCTTTCCCTTGCT+TGG - chr8_4:47926381-47926400 None:intergenic 40.0%
GGAAAGAAGAACAAGAAGCA+CGG + chr8_4:47926387-47926406 Msa1329350:CDS 40.0%
AAGATTTACCTCATCGTTCG+CGG - chr8_4:47926511-47926530 None:intergenic 40.0%
!!! GAGCTGTCGTTTTTGTTTTC+TGG + chr8_4:47926804-47926823 Msa1329350:intron 40.0%
GATAATGCAGATGAATGCGA+GGG - chr8_4:47926016-47926035 None:intergenic 40.0%
! AGATGATTTGGGAGAAGCAA+CGG - chr8_4:47926166-47926185 None:intergenic 40.0%
TTGTTCTTCTTTCCCTTGCT+TGG - chr8_4:47926381-47926400 None:intergenic 40.0%
GGAAAGAAGAACAAGAAGCA+CGG + chr8_4:47926387-47926406 Msa1329350:CDS 40.0%
AAGATTTACCTCATCGTTCG+CGG - chr8_4:47926511-47926530 None:intergenic 40.0%
!!! GAGCTGTCGTTTTTGTTTTC+TGG + chr8_4:47926804-47926823 Msa1329350:intron 40.0%
TTGAGGAACTGTGCGATGAA+AGG - chr8_4:47925885-47925904 None:intergenic 45.0%
GAGAAAGAGTGAGTGAGAGA+GGG - chr8_4:47925909-47925928 None:intergenic 45.0%
AGAGAAAGAGTGAGTGAGAG+AGG - chr8_4:47925910-47925929 None:intergenic 45.0%
CGATAATGCAGATGAATGCG+AGG - chr8_4:47926017-47926036 None:intergenic 45.0%
TTCATCTGCATTATCGTCGC+CGG + chr8_4:47926021-47926040 Msa1329350:CDS 45.0%
! GATGATTTGGGAGAAGCAAC+GGG - chr8_4:47926165-47926184 None:intergenic 45.0%
GGTGTAGGAGACACCTTATT+AGG + chr8_4:47926705-47926724 Msa1329350:intron 45.0%
AGAGTGGAGCAGAAACTATC+AGG + chr8_4:47927376-47927395 Msa1329350:intron 45.0%
ATCAGGAGCTTGAAGATGCT+AGG + chr8_4:47927393-47927412 Msa1329350:CDS 45.0%
GTGAGTATGTGACTGCTTGA+CGG + chr8_4:47927740-47927759 Msa1329350:three_prime_UTR 45.0%
! GGGATTTTACGGGAAAAGAC+AGG - chr8_4:47927838-47927857 None:intergenic 45.0%
TTGAGGAACTGTGCGATGAA+AGG - chr8_4:47925885-47925904 None:intergenic 45.0%
GAGAAAGAGTGAGTGAGAGA+GGG - chr8_4:47925909-47925928 None:intergenic 45.0%
AGAGAAAGAGTGAGTGAGAG+AGG - chr8_4:47925910-47925929 None:intergenic 45.0%
CGATAATGCAGATGAATGCG+AGG - chr8_4:47926017-47926036 None:intergenic 45.0%
TTCATCTGCATTATCGTCGC+CGG + chr8_4:47926021-47926040 Msa1329350:CDS 45.0%
! GATGATTTGGGAGAAGCAAC+GGG - chr8_4:47926165-47926184 None:intergenic 45.0%
GGTGTAGGAGACACCTTATT+AGG + chr8_4:47926705-47926724 Msa1329350:intron 45.0%
AGAGTGGAGCAGAAACTATC+AGG + chr8_4:47927376-47927395 Msa1329350:intron 45.0%
ATCAGGAGCTTGAAGATGCT+AGG + chr8_4:47927393-47927412 Msa1329350:CDS 45.0%
GTGAGTATGTGACTGCTTGA+CGG + chr8_4:47927740-47927759 Msa1329350:three_prime_UTR 45.0%
! GGGATTTTACGGGAAAAGAC+AGG - chr8_4:47927838-47927857 None:intergenic 45.0%
!!! TTATTTATTTTATTCATATT+TGG - chr8_4:47926852-47926871 None:intergenic 5.0%
!! TGAATAAAATAAATAAAATA+AGG + chr8_4:47926856-47926875 Msa1329350:intron 5.0%
!!! TTTTTTTTTTTTCTTATTTT+TGG + chr8_4:47927514-47927533 Msa1329350:three_prime_UTR 5.0%
!!! TTATTTATTTTATTCATATT+TGG - chr8_4:47926852-47926871 None:intergenic 5.0%
!! TGAATAAAATAAATAAAATA+AGG + chr8_4:47926856-47926875 Msa1329350:intron 5.0%
!!! TTTTTTTTTTTTCTTATTTT+TGG + chr8_4:47927514-47927533 Msa1329350:three_prime_UTR 5.0%
AGTGAGTGAGAGAGGGTTTG+AGG - chr8_4:47925902-47925921 None:intergenic 50.0%
AACCACCTCACCATCAACTC+CGG + chr8_4:47926074-47926093 Msa1329350:CDS 50.0%
GTTGTTGGTGTGGTTGTAGG+AGG - chr8_4:47926135-47926154 None:intergenic 50.0%
!! GGTGTTGTTGGTGTGGTTGT+AGG - chr8_4:47926138-47926157 None:intergenic 50.0%
GCAGCTGGAGGAGATGATTT+GGG - chr8_4:47926177-47926196 None:intergenic 50.0%
AGCAGCTGGAGGAGATGATT+TGG - chr8_4:47926178-47926197 None:intergenic 50.0%
GATTTGACAGGAACTGGTGC+TGG - chr8_4:47926270-47926289 None:intergenic 50.0%
GGTGGTGATTTGACAGGAAC+TGG - chr8_4:47926276-47926295 None:intergenic 50.0%
!! TTCTTTCCCTTGCTTGGTGC+TGG - chr8_4:47926375-47926394 None:intergenic 50.0%
AGGAGCTTGAAGATGCTAGG+AGG + chr8_4:47927396-47927415 Msa1329350:CDS 50.0%
!! TAGGAGGCTTAGCTTTGAGC+TGG + chr8_4:47927412-47927431 Msa1329350:CDS 50.0%
!! AGGCTTAGCTTTGAGCTGGA+TGG + chr8_4:47927416-47927435 Msa1329350:CDS 50.0%
AGTGAGTGAGAGAGGGTTTG+AGG - chr8_4:47925902-47925921 None:intergenic 50.0%
AACCACCTCACCATCAACTC+CGG + chr8_4:47926074-47926093 Msa1329350:CDS 50.0%
GTTGTTGGTGTGGTTGTAGG+AGG - chr8_4:47926135-47926154 None:intergenic 50.0%
!! GGTGTTGTTGGTGTGGTTGT+AGG - chr8_4:47926138-47926157 None:intergenic 50.0%
GCAGCTGGAGGAGATGATTT+GGG - chr8_4:47926177-47926196 None:intergenic 50.0%
AGCAGCTGGAGGAGATGATT+TGG - chr8_4:47926178-47926197 None:intergenic 50.0%
GATTTGACAGGAACTGGTGC+TGG - chr8_4:47926270-47926289 None:intergenic 50.0%
GGTGGTGATTTGACAGGAAC+TGG - chr8_4:47926276-47926295 None:intergenic 50.0%
!! TTCTTTCCCTTGCTTGGTGC+TGG - chr8_4:47926375-47926394 None:intergenic 50.0%
AGGAGCTTGAAGATGCTAGG+AGG + chr8_4:47927396-47927415 Msa1329350:CDS 50.0%
!! TAGGAGGCTTAGCTTTGAGC+TGG + chr8_4:47927412-47927431 Msa1329350:CDS 50.0%
!! AGGCTTAGCTTTGAGCTGGA+TGG + chr8_4:47927416-47927435 Msa1329350:CDS 50.0%
!! GGAGTTGATGGTGAGGTGGT+TGG - chr8_4:47926075-47926094 None:intergenic 55.0%
AGATGCAACAGGAGTGGTGG+CGG - chr8_4:47926100-47926119 None:intergenic 55.0%
CACCACTCCTGTTGCATCTC+CGG + chr8_4:47926101-47926120 Msa1329350:CDS 55.0%
TACCGGAGATGCAACAGGAG+TGG - chr8_4:47926106-47926125 None:intergenic 55.0%
!! GTTGTAGGAGGTGCTGCTAC+CGG - chr8_4:47926123-47926142 None:intergenic 55.0%
! TTGACAGGAACTGGTGCTGG+TGG - chr8_4:47926267-47926286 None:intergenic 55.0%
GGTGTGGGTGGTGATTTGAC+AGG - chr8_4:47926282-47926301 None:intergenic 55.0%
ACCACCAGCAGTAACACCTG+TGG + chr8_4:47926317-47926336 Msa1329350:CDS 55.0%
!! AACAACGCTGGTGATGGTGC+TGG - chr8_4:47926417-47926436 None:intergenic 55.0%
AGCACCATCACCAGCGTTGT+TGG + chr8_4:47926416-47926435 Msa1329350:CDS 55.0%
GCACCATCACCAGCGTTGTT+GGG + chr8_4:47926417-47926436 Msa1329350:CDS 55.0%
TCATCGTTCGCGGTAGAAGC+GGG - chr8_4:47926501-47926520 None:intergenic 55.0%
CTCATCGTTCGCGGTAGAAG+CGG - chr8_4:47926502-47926521 None:intergenic 55.0%
TACACCGAACCCACCGTCAA+TGG - chr8_4:47926691-47926710 None:intergenic 55.0%
!! ATTGACGGTGGGTTCGGTGT+AGG + chr8_4:47926690-47926709 Msa1329350:intron 55.0%
!! GGAGTTGATGGTGAGGTGGT+TGG - chr8_4:47926075-47926094 None:intergenic 55.0%
AGATGCAACAGGAGTGGTGG+CGG - chr8_4:47926100-47926119 None:intergenic 55.0%
CACCACTCCTGTTGCATCTC+CGG + chr8_4:47926101-47926120 Msa1329350:CDS 55.0%
TACCGGAGATGCAACAGGAG+TGG - chr8_4:47926106-47926125 None:intergenic 55.0%
!! GTTGTAGGAGGTGCTGCTAC+CGG - chr8_4:47926123-47926142 None:intergenic 55.0%
! TTGACAGGAACTGGTGCTGG+TGG - chr8_4:47926267-47926286 None:intergenic 55.0%
GGTGTGGGTGGTGATTTGAC+AGG - chr8_4:47926282-47926301 None:intergenic 55.0%
ACCACCAGCAGTAACACCTG+TGG + chr8_4:47926317-47926336 Msa1329350:CDS 55.0%
!! AACAACGCTGGTGATGGTGC+TGG - chr8_4:47926417-47926436 None:intergenic 55.0%
AGCACCATCACCAGCGTTGT+TGG + chr8_4:47926416-47926435 Msa1329350:CDS 55.0%
GCACCATCACCAGCGTTGTT+GGG + chr8_4:47926417-47926436 Msa1329350:CDS 55.0%
TCATCGTTCGCGGTAGAAGC+GGG - chr8_4:47926501-47926520 None:intergenic 55.0%
CTCATCGTTCGCGGTAGAAG+CGG - chr8_4:47926502-47926521 None:intergenic 55.0%
TACACCGAACCCACCGTCAA+TGG - chr8_4:47926691-47926710 None:intergenic 55.0%
!! ATTGACGGTGGGTTCGGTGT+AGG + chr8_4:47926690-47926709 Msa1329350:intron 55.0%
TGCATTATCGTCGCCGGCGT+CGG + chr8_4:47926027-47926046 Msa1329350:CDS 60.0%
TTGGTGCAGCGGAAGGTGAC+TGG - chr8_4:47926056-47926075 None:intergenic 60.0%
! TGGTGAGGTGGTTGGTGCAG+CGG - chr8_4:47926067-47926086 None:intergenic 60.0%
CGGAGATGCAACAGGAGTGG+TGG - chr8_4:47926103-47926122 None:intergenic 60.0%
GCTGCTACCGGAGATGCAAC+AGG - chr8_4:47926111-47926130 None:intergenic 60.0%
!! GGGAGCTGGTGTTGTTGGTG+TGG - chr8_4:47926145-47926164 None:intergenic 60.0%
!! GCAACGGGAGCTGGTGTTGT+TGG - chr8_4:47926150-47926169 None:intergenic 60.0%
TTGGGAGAAGCAACGGGAGC+TGG - chr8_4:47926159-47926178 None:intergenic 60.0%
TGCTCCGGCAACCAAACCTC+CGG + chr8_4:47926203-47926222 Msa1329350:CDS 60.0%
! TGGTGATGCTGCCGGAGGTT+TGG - chr8_4:47926217-47926236 None:intergenic 60.0%
!! ACAGGAACTGGTGCTGGTGG+TGG - chr8_4:47926264-47926283 None:intergenic 60.0%
GAGCTGACTGGAGCAGGTGT+GGG - chr8_4:47926297-47926316 None:intergenic 60.0%
TGAGCTGACTGGAGCAGGTG+TGG - chr8_4:47926298-47926317 None:intergenic 60.0%
! ACTGCTGGTGGTGAGCTGAC+TGG - chr8_4:47926309-47926328 None:intergenic 60.0%
!! GCCACAGGTGTTACTGCTGG+TGG - chr8_4:47926321-47926340 None:intergenic 60.0%
!! GCAGCCACAGGTGTTACTGC+TGG - chr8_4:47926324-47926343 None:intergenic 60.0%
TGCTCCAACCACCACACCAG+CGG + chr8_4:47926341-47926360 Msa1329350:CDS 60.0%
TCCAGCTCCAGCACCAAGCA+AGG + chr8_4:47926365-47926384 Msa1329350:CDS 60.0%
CCAGCTCCAGCACCAAGCAA+GGG + chr8_4:47926366-47926385 Msa1329350:CDS 60.0%
GGACCCAACAACGCTGGTGA+TGG - chr8_4:47926423-47926442 None:intergenic 60.0%
CCTGCATCTTCGCTTGGTCC+AGG - chr8_4:47926468-47926487 None:intergenic 60.0%
CCTGGACCAAGCGAAGATGC+AGG + chr8_4:47926465-47926484 Msa1329350:CDS 60.0%
GGTGCTCCTGCATCTTCGCT+TGG - chr8_4:47926474-47926493 None:intergenic 60.0%
!! AGCGAAGATGCAGGAGCACC+TGG + chr8_4:47926474-47926493 Msa1329350:CDS 60.0%
CGCTTCTACCGCGAACGATG+AGG + chr8_4:47926500-47926519 Msa1329350:CDS 60.0%
! GCCACCATTGACGGTGGGTT+CGG + chr8_4:47926684-47926703 Msa1329350:intron 60.0%
ACCGAACCCACCGTCAATGG+TGG - chr8_4:47926688-47926707 None:intergenic 60.0%
TGCATTATCGTCGCCGGCGT+CGG + chr8_4:47926027-47926046 Msa1329350:CDS 60.0%
TTGGTGCAGCGGAAGGTGAC+TGG - chr8_4:47926056-47926075 None:intergenic 60.0%
! TGGTGAGGTGGTTGGTGCAG+CGG - chr8_4:47926067-47926086 None:intergenic 60.0%
CGGAGATGCAACAGGAGTGG+TGG - chr8_4:47926103-47926122 None:intergenic 60.0%
GCTGCTACCGGAGATGCAAC+AGG - chr8_4:47926111-47926130 None:intergenic 60.0%
!! GGGAGCTGGTGTTGTTGGTG+TGG - chr8_4:47926145-47926164 None:intergenic 60.0%
!! GCAACGGGAGCTGGTGTTGT+TGG - chr8_4:47926150-47926169 None:intergenic 60.0%
TTGGGAGAAGCAACGGGAGC+TGG - chr8_4:47926159-47926178 None:intergenic 60.0%
TGCTCCGGCAACCAAACCTC+CGG + chr8_4:47926203-47926222 Msa1329350:CDS 60.0%
! TGGTGATGCTGCCGGAGGTT+TGG - chr8_4:47926217-47926236 None:intergenic 60.0%
!! ACAGGAACTGGTGCTGGTGG+TGG - chr8_4:47926264-47926283 None:intergenic 60.0%
GAGCTGACTGGAGCAGGTGT+GGG - chr8_4:47926297-47926316 None:intergenic 60.0%
TGAGCTGACTGGAGCAGGTG+TGG - chr8_4:47926298-47926317 None:intergenic 60.0%
! ACTGCTGGTGGTGAGCTGAC+TGG - chr8_4:47926309-47926328 None:intergenic 60.0%
!! GCCACAGGTGTTACTGCTGG+TGG - chr8_4:47926321-47926340 None:intergenic 60.0%
!! GCAGCCACAGGTGTTACTGC+TGG - chr8_4:47926324-47926343 None:intergenic 60.0%
TGCTCCAACCACCACACCAG+CGG + chr8_4:47926341-47926360 Msa1329350:CDS 60.0%
TCCAGCTCCAGCACCAAGCA+AGG + chr8_4:47926365-47926384 Msa1329350:CDS 60.0%
CCAGCTCCAGCACCAAGCAA+GGG + chr8_4:47926366-47926385 Msa1329350:CDS 60.0%
GGACCCAACAACGCTGGTGA+TGG - chr8_4:47926423-47926442 None:intergenic 60.0%
CCTGCATCTTCGCTTGGTCC+AGG - chr8_4:47926468-47926487 None:intergenic 60.0%
CCTGGACCAAGCGAAGATGC+AGG + chr8_4:47926465-47926484 Msa1329350:CDS 60.0%
GGTGCTCCTGCATCTTCGCT+TGG - chr8_4:47926474-47926493 None:intergenic 60.0%
!! AGCGAAGATGCAGGAGCACC+TGG + chr8_4:47926474-47926493 Msa1329350:CDS 60.0%
CGCTTCTACCGCGAACGATG+AGG + chr8_4:47926500-47926519 Msa1329350:CDS 60.0%
! GCCACCATTGACGGTGGGTT+CGG + chr8_4:47926684-47926703 Msa1329350:intron 60.0%
ACCGAACCCACCGTCAATGG+TGG - chr8_4:47926688-47926707 None:intergenic 60.0%
! ATTATCGTCGCCGGCGTCGG+TGG + chr8_4:47926030-47926049 Msa1329350:CDS 65.0%
! GAGGTGGTTGGTGCAGCGGA+AGG - chr8_4:47926063-47926082 None:intergenic 65.0%
!! GGCCGGAGTTGATGGTGAGG+TGG - chr8_4:47926079-47926098 None:intergenic 65.0%
TCCAGCTGCTGCACCTGCTC+CGG + chr8_4:47926188-47926207 Msa1329350:CDS 65.0%
! GGAGGTTTGGTTGCCGGAGC+AGG - chr8_4:47926204-47926223 None:intergenic 65.0%
! GCTGCCGGAGGTTTGGTTGC+CGG - chr8_4:47926210-47926229 None:intergenic 65.0%
ACCTCCGGCAGCATCACCAC+CGG + chr8_4:47926218-47926237 Msa1329350:CDS 65.0%
!! GTGCTGACTGGTGTCACCGC+CGG - chr8_4:47926240-47926259 None:intergenic 65.0%
!! GCTGGTGGTGGAGTGCTGAC+TGG - chr8_4:47926252-47926271 None:intergenic 65.0%
CTGACTGGAGCAGGTGTGGG+TGG - chr8_4:47926294-47926313 None:intergenic 65.0%
GGTGGTGAGCTGACTGGAGC+AGG - chr8_4:47926303-47926322 None:intergenic 65.0%
GTGGTGGTTGGAGCAGCCAC+AGG - chr8_4:47926336-47926355 None:intergenic 65.0%
GGAACCGCTGGTGTGGTGGT+TGG - chr8_4:47926348-47926367 None:intergenic 65.0%
AGCTGGAACCGCTGGTGTGG+TGG - chr8_4:47926352-47926371 None:intergenic 65.0%
TGGAGCTGGAACCGCTGGTG+TGG - chr8_4:47926355-47926374 None:intergenic 65.0%
!! CCCTTGCTTGGTGCTGGAGC+TGG - chr8_4:47926369-47926388 None:intergenic 65.0%
! GCTGGTGGACCCAACAACGC+TGG - chr8_4:47926429-47926448 None:intergenic 65.0%
CTTGGTCCAGGTGCTCCTGC+TGG - chr8_4:47926456-47926475 None:intergenic 65.0%
TTCGCGGTAGAAGCGGGTCC+AGG - chr8_4:47926495-47926514 None:intergenic 65.0%
GTGCCACGCGCCACCATTGA+CGG + chr8_4:47926675-47926694 Msa1329350:intron 65.0%
CACGCGCCACCATTGACGGT+GGG + chr8_4:47926679-47926698 Msa1329350:intron 65.0%
! ATTATCGTCGCCGGCGTCGG+TGG + chr8_4:47926030-47926049 Msa1329350:CDS 65.0%
! GAGGTGGTTGGTGCAGCGGA+AGG - chr8_4:47926063-47926082 None:intergenic 65.0%
!! GGCCGGAGTTGATGGTGAGG+TGG - chr8_4:47926079-47926098 None:intergenic 65.0%
TCCAGCTGCTGCACCTGCTC+CGG + chr8_4:47926188-47926207 Msa1329350:CDS 65.0%
! GGAGGTTTGGTTGCCGGAGC+AGG - chr8_4:47926204-47926223 None:intergenic 65.0%
! GCTGCCGGAGGTTTGGTTGC+CGG - chr8_4:47926210-47926229 None:intergenic 65.0%
ACCTCCGGCAGCATCACCAC+CGG + chr8_4:47926218-47926237 Msa1329350:CDS 65.0%
!! GTGCTGACTGGTGTCACCGC+CGG - chr8_4:47926240-47926259 None:intergenic 65.0%
!! GCTGGTGGTGGAGTGCTGAC+TGG - chr8_4:47926252-47926271 None:intergenic 65.0%
CTGACTGGAGCAGGTGTGGG+TGG - chr8_4:47926294-47926313 None:intergenic 65.0%
GGTGGTGAGCTGACTGGAGC+AGG - chr8_4:47926303-47926322 None:intergenic 65.0%
GTGGTGGTTGGAGCAGCCAC+AGG - chr8_4:47926336-47926355 None:intergenic 65.0%
GGAACCGCTGGTGTGGTGGT+TGG - chr8_4:47926348-47926367 None:intergenic 65.0%
AGCTGGAACCGCTGGTGTGG+TGG - chr8_4:47926352-47926371 None:intergenic 65.0%
TGGAGCTGGAACCGCTGGTG+TGG - chr8_4:47926355-47926374 None:intergenic 65.0%
!! CCCTTGCTTGGTGCTGGAGC+TGG - chr8_4:47926369-47926388 None:intergenic 65.0%
! GCTGGTGGACCCAACAACGC+TGG - chr8_4:47926429-47926448 None:intergenic 65.0%
CTTGGTCCAGGTGCTCCTGC+TGG - chr8_4:47926456-47926475 None:intergenic 65.0%
TTCGCGGTAGAAGCGGGTCC+AGG - chr8_4:47926495-47926514 None:intergenic 65.0%
GTGCCACGCGCCACCATTGA+CGG + chr8_4:47926675-47926694 Msa1329350:intron 65.0%
CACGCGCCACCATTGACGGT+GGG + chr8_4:47926679-47926698 Msa1329350:intron 65.0%
! AGGTGACTGGCCACCGACGC+CGG - chr8_4:47926043-47926062 None:intergenic 70.0%
!! GGCGGCCGGAGTTGATGGTG+AGG - chr8_4:47926082-47926101 None:intergenic 70.0%
!! GTGGTGGCGGCCGGAGTTGA+TGG - chr8_4:47926087-47926106 None:intergenic 70.0%
!! GCAACAGGAGTGGTGGCGGC+CGG - chr8_4:47926096-47926115 None:intergenic 70.0%
GGAGCAGGTGCAGCAGCTGG+AGG - chr8_4:47926189-47926208 None:intergenic 70.0%
TCCGGCAGCATCACCACCGG+CGG + chr8_4:47926221-47926240 Msa1329350:CDS 70.0%
! ACCGCCGGTGGTGATGCTGC+CGG - chr8_4:47926225-47926244 None:intergenic 70.0%
!! CTGACTGGTGTCACCGCCGG+TGG - chr8_4:47926237-47926256 None:intergenic 70.0%
! GGTGCTGGAGCTGGAACCGC+TGG - chr8_4:47926360-47926379 None:intergenic 70.0%
GGTCCACCAGCACCACCAGC+AGG + chr8_4:47926438-47926457 Msa1329350:CDS 70.0%
! GCTCCTGCTGGTGGTGCTGG+TGG - chr8_4:47926444-47926463 None:intergenic 70.0%
! GGTGCTCCTGCTGGTGGTGC+TGG - chr8_4:47926447-47926466 None:intergenic 70.0%
!! GCACCACCAGCAGGAGCACC+TGG + chr8_4:47926447-47926466 Msa1329350:CDS 70.0%
GGTCCAGGTGCTCCTGCTGG+TGG - chr8_4:47926453-47926472 None:intergenic 70.0%
! CCACCGTCAATGGTGGCGCG+TGG - chr8_4:47926681-47926700 None:intergenic 70.0%
CCACGCGCCACCATTGACGG+TGG + chr8_4:47926678-47926697 Msa1329350:intron 70.0%
! AGGTGACTGGCCACCGACGC+CGG - chr8_4:47926043-47926062 None:intergenic 70.0%
!! GGCGGCCGGAGTTGATGGTG+AGG - chr8_4:47926082-47926101 None:intergenic 70.0%
!! GTGGTGGCGGCCGGAGTTGA+TGG - chr8_4:47926087-47926106 None:intergenic 70.0%
!! GCAACAGGAGTGGTGGCGGC+CGG - chr8_4:47926096-47926115 None:intergenic 70.0%
GGAGCAGGTGCAGCAGCTGG+AGG - chr8_4:47926189-47926208 None:intergenic 70.0%
TCCGGCAGCATCACCACCGG+CGG + chr8_4:47926221-47926240 Msa1329350:CDS 70.0%
! ACCGCCGGTGGTGATGCTGC+CGG - chr8_4:47926225-47926244 None:intergenic 70.0%
!! CTGACTGGTGTCACCGCCGG+TGG - chr8_4:47926237-47926256 None:intergenic 70.0%
! GGTGCTGGAGCTGGAACCGC+TGG - chr8_4:47926360-47926379 None:intergenic 70.0%
GGTCCACCAGCACCACCAGC+AGG + chr8_4:47926438-47926457 Msa1329350:CDS 70.0%
! GCTCCTGCTGGTGGTGCTGG+TGG - chr8_4:47926444-47926463 None:intergenic 70.0%
! GGTGCTCCTGCTGGTGGTGC+TGG - chr8_4:47926447-47926466 None:intergenic 70.0%
!! GCACCACCAGCAGGAGCACC+TGG + chr8_4:47926447-47926466 Msa1329350:CDS 70.0%
GGTCCAGGTGCTCCTGCTGG+TGG - chr8_4:47926453-47926472 None:intergenic 70.0%
! CCACCGTCAATGGTGGCGCG+TGG - chr8_4:47926681-47926700 None:intergenic 70.0%
CCACGCGCCACCATTGACGG+TGG + chr8_4:47926678-47926697 Msa1329350:intron 70.0%
GCCGGAGCAGGTGCAGCAGC+TGG - chr8_4:47926192-47926211 None:intergenic 75.0%
! GCCGGTGGTGATGCTGCCGG+AGG - chr8_4:47926222-47926241 None:intergenic 75.0%
GCCGGAGCAGGTGCAGCAGC+TGG - chr8_4:47926192-47926211 None:intergenic 75.0%
! GCCGGTGGTGATGCTGCCGG+AGG - chr8_4:47926222-47926241 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 47925839 47927873 47925839 ID=Msa1329350;Name=Msa1329350
chr8_4 mRNA 47925839 47927873 47925839 ID=Msa1329350-mRNA-1;Parent=Msa1329350;Name=Msa1329350-mRNA-1;_AED=0.04;_eAED=0.04;_QI=152|1|1|1|1|1|2|415|203
chr8_4 exon 47925839 47926521 47925839 ID=Msa1329350-mRNA-1:exon:13724;Parent=Msa1329350-mRNA-1
chr8_4 exon 47927378 47927873 47927378 ID=Msa1329350-mRNA-1:exon:13725;Parent=Msa1329350-mRNA-1
chr8_4 five_prime_UTR 47925839 47925990 47925839 ID=Msa1329350-mRNA-1:five_prime_utr;Parent=Msa1329350-mRNA-1
chr8_4 CDS 47925991 47926521 47925991 ID=Msa1329350-mRNA-1:cds;Parent=Msa1329350-mRNA-1
chr8_4 CDS 47927378 47927458 47927378 ID=Msa1329350-mRNA-1:cds;Parent=Msa1329350-mRNA-1
chr8_4 three_prime_UTR 47927459 47927873 47927459 ID=Msa1329350-mRNA-1:three_prime_utr;Parent=Msa1329350-mRNA-1
Gene Sequence

>Msa1329350

ATGGATCGTAACAATCTCTTCACCCTCGCATTCATCTGCATTATCGTCGCCGGCGTCGGTGGCCAGTCACCTTCCGCTGCACCAACCACCTCACCATCAACTCCGGCCGCCACCACTCCTGTTGCATCTCCGGTAGCAGCACCTCCTACAACCACACCAACAACACCAGCTCCCGTTGCTTCTCCCAAATCATCTCCTCCAGCTGCTGCACCTGCTCCGGCAACCAAACCTCCGGCAGCATCACCACCGGCGGTGACACCAGTCAGCACTCCACCACCAGCACCAGTTCCTGTCAAATCACCACCCACACCTGCTCCAGTCAGCTCACCACCAGCAGTAACACCTGTGGCTGCTCCAACCACCACACCAGCGGTTCCAGCTCCAGCACCAAGCAAGGGAAAGAAGAACAAGAAGCACGGTGCTCCAGCACCATCACCAGCGTTGTTGGGTCCACCAGCACCACCAGCAGGAGCACCTGGACCAAGCGAAGATGCAGGAGCACCTGGACCCGCTTCTACCGCGAACGATGAGAGTGGAGCAGAAACTATCAGGAGCTTGAAGATGCTAGGAGGCTTAGCTTTGAGCTGGATGGCTGTTGTTTTATTCTTCTAG
Protein sequence

>Msa1329350

MDRNNLFTLAFICIIVAGVGGQSPSAAPTTSPSTPAATTPVASPVAAPPTTTPTTPAPVASPKSSPPAAAPAPATKPPAASPPAVTPVSTPPPAPVPVKSPPTPAPVSSPPAVTPVAAPTTTPAVPAPAPSKGKKNKKHGAPAPSPALLGPPAPPAGAPGPSEDAGAPGPASTANDESGAETIRSLKMLGGLALSWMAVVLFF*