Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0992860 | XP_013452470.1 | 97.570 | 535 | 6 | 4 | 1 | 531 | 1 | 532 | 0.0 | 1058 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0992860 | sp|Q8GYY0|1A112_ARATH | 60.558 | 502 | 187 | 4 | 32 | 529 | 1 | 495 | 0.0 | 634 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0992860 | A0A072UBT9 | 97.570 | 535 | 6 | 4 | 1 | 531 | 1 | 532 | 0.0 | 1058 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0039780 | Msa0992860 | 0.815668 | 8.216232e-52 | -8.615850e-47 |
| Msa0087370 | Msa0992860 | 0.813420 | 2.583131e-51 | -8.615850e-47 |
| Msa0175240 | Msa0992860 | 0.808093 | 3.668443e-50 | -8.615850e-47 |
| Msa0186400 | Msa0992860 | 0.802755 | 4.825905e-49 | -8.615850e-47 |
| Msa0433890 | Msa0992860 | 0.806349 | 8.587744e-50 | -8.615850e-47 |
| Msa0992860 | Msa1373310 | 0.802159 | 6.402395e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0992860 | MtrunA17_Chr6g0475681 | 97.570 | 535 | 6 | 4 | 1 | 531 | 1 | 532 | 0.0 | 1058 |
| Msa0992860 | MtrunA17_Chr5g0398431 | 53.213 | 498 | 226 | 4 | 32 | 526 | 1 | 494 | 0.0 | 551 |
| Msa0992860 | MtrunA17_Chr4g0054371 | 45.327 | 428 | 219 | 6 | 118 | 531 | 16 | 442 | 7.68e-142 | 417 |
| Msa0992860 | MtrunA17_Chr6g0488041 | 44.471 | 425 | 230 | 3 | 104 | 524 | 12 | 434 | 1.58e-141 | 415 |
| Msa0992860 | MtrunA17_Chr8g0389311 | 44.340 | 424 | 224 | 4 | 102 | 521 | 8 | 423 | 3.31e-138 | 406 |
| Msa0992860 | MtrunA17_Chr8g0389321 | 44.340 | 424 | 224 | 4 | 102 | 521 | 8 | 423 | 3.31e-138 | 406 |
| Msa0992860 | MtrunA17_Chr3g0135251 | 44.988 | 429 | 227 | 3 | 106 | 526 | 2 | 429 | 3.39e-137 | 405 |
| Msa0992860 | MtrunA17_Chr5g0400831 | 44.153 | 419 | 221 | 6 | 118 | 524 | 16 | 433 | 1.84e-136 | 404 |
| Msa0992860 | MtrunA17_Chr8g0387481 | 41.647 | 425 | 241 | 3 | 106 | 524 | 12 | 435 | 1.08e-130 | 389 |
| Msa0992860 | MtrunA17_Chr8g0348351 | 41.531 | 431 | 248 | 2 | 97 | 524 | 2 | 431 | 3.45e-128 | 382 |
| Msa0992860 | MtrunA17_Chr7g0248681 | 41.135 | 423 | 244 | 3 | 106 | 524 | 11 | 432 | 1.59e-123 | 370 |
| Msa0992860 | MtrunA17_Chr5g0412871 | 23.843 | 432 | 267 | 14 | 138 | 522 | 47 | 463 | 1.91e-20 | 94.4 |
| Msa0992860 | MtrunA17_Chr8g0345201 | 20.994 | 362 | 256 | 13 | 185 | 520 | 154 | 511 | 1.65e-12 | 69.7 |
| Msa0992860 | MtrunA17_Chr8g0382671 | 21.726 | 336 | 239 | 10 | 168 | 492 | 115 | 437 | 3.44e-12 | 68.6 |
| Msa0992860 | MtrunA17_Chr2g0324801 | 25.448 | 279 | 165 | 9 | 185 | 441 | 46 | 303 | 9.91e-12 | 66.6 |
| Msa0992860 | MtrunA17_Chr7g0267911 | 20.541 | 370 | 263 | 12 | 168 | 524 | 113 | 464 | 2.19e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0992860 | AT5G51690.1 | 60.558 | 502 | 187 | 4 | 32 | 529 | 1 | 495 | 0.0 | 634 |
| Msa0992860 | AT1G62960.1 | 52.985 | 536 | 211 | 9 | 30 | 531 | 29 | 557 | 0.0 | 556 |
| Msa0992860 | AT5G51690.2 | 61.081 | 370 | 141 | 1 | 163 | 529 | 3 | 372 | 1.93e-173 | 494 |
| Msa0992860 | AT4G37770.1 | 46.838 | 427 | 219 | 3 | 106 | 525 | 4 | 429 | 5.66e-144 | 423 |
| Msa0992860 | AT2G22810.1 | 45.057 | 435 | 230 | 4 | 104 | 530 | 2 | 435 | 8.33e-141 | 415 |
| Msa0992860 | AT3G49700.1 | 46.809 | 423 | 217 | 3 | 114 | 529 | 12 | 433 | 2.51e-139 | 411 |
| Msa0992860 | AT5G65800.1 | 44.952 | 416 | 221 | 3 | 118 | 526 | 16 | 430 | 1.52e-135 | 401 |
| Msa0992860 | AT4G26200.1 | 44.444 | 450 | 230 | 7 | 84 | 525 | 5 | 442 | 5.04e-135 | 399 |
| Msa0992860 | AT4G08040.1 | 44.068 | 413 | 226 | 3 | 118 | 526 | 14 | 425 | 1.25e-133 | 396 |
| Msa0992860 | AT4G11280.1 | 42.619 | 420 | 236 | 3 | 106 | 521 | 15 | 433 | 7.89e-130 | 387 |
| Msa0992860 | AT1G01480.1 | 41.299 | 431 | 245 | 4 | 106 | 529 | 12 | 441 | 2.26e-124 | 374 |
| Msa0992860 | AT3G61510.1 | 39.352 | 432 | 254 | 4 | 97 | 524 | 2 | 429 | 1.28e-121 | 366 |
| Msa0992860 | AT1G01480.2 | 41.194 | 335 | 190 | 3 | 202 | 529 | 1 | 335 | 4.81e-96 | 297 |
| Msa0992860 | AT1G23310.1 | 25.132 | 378 | 246 | 15 | 175 | 522 | 93 | 463 | 4.88e-21 | 96.7 |
| Msa0992860 | AT1G70580.4 | 25.995 | 377 | 244 | 15 | 175 | 522 | 93 | 463 | 5.20e-21 | 96.7 |
| Msa0992860 | AT1G70580.2 | 25.995 | 377 | 244 | 15 | 175 | 522 | 93 | 463 | 5.20e-21 | 96.7 |
| Msa0992860 | AT1G70580.3 | 25.995 | 377 | 244 | 15 | 175 | 522 | 93 | 463 | 5.20e-21 | 96.7 |
| Msa0992860 | AT1G70580.1 | 25.995 | 377 | 244 | 15 | 175 | 522 | 93 | 463 | 5.20e-21 | 96.7 |
| Msa0992860 | AT1G23310.2 | 24.855 | 346 | 227 | 12 | 175 | 492 | 93 | 433 | 1.66e-19 | 91.7 |
| Msa0992860 | AT1G72330.1 | 22.000 | 350 | 225 | 13 | 213 | 526 | 196 | 533 | 2.08e-16 | 82.4 |
| Msa0992860 | AT1G72330.2 | 28.402 | 169 | 105 | 6 | 213 | 376 | 196 | 353 | 8.59e-16 | 80.1 |
| Msa0992860 | AT1G17290.1 | 21.693 | 378 | 246 | 13 | 185 | 526 | 173 | 536 | 1.24e-15 | 80.1 |
| Msa0992860 | AT1G72330.3 | 21.488 | 363 | 224 | 13 | 213 | 526 | 196 | 546 | 4.92e-15 | 78.2 |
| Msa0992860 | AT5G36160.1 | 27.941 | 204 | 116 | 6 | 185 | 378 | 80 | 262 | 7.68e-13 | 70.9 |
| Msa0992860 | AT2G22250.1 | 21.579 | 380 | 257 | 13 | 169 | 530 | 69 | 425 | 8.01e-13 | 70.9 |
| Msa0992860 | AT2G22250.3 | 21.579 | 380 | 257 | 13 | 169 | 530 | 116 | 472 | 9.21e-13 | 70.9 |
| Msa0992860 | AT2G22250.2 | 21.579 | 380 | 257 | 13 | 169 | 530 | 116 | 472 | 9.21e-13 | 70.9 |
Find 129 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAGGACGACGTCGTTTA+AGG | 0.204925 | 6_4:-63317813 | None:intergenic |
| GATATCAATTTGAGTATAAA+TGG | 0.236641 | 6_4:+63319829 | Msa0992860:CDS |
| AGAAGACTGAAAAGCATTTC+TGG | 0.240255 | 6_4:-63322849 | None:intergenic |
| AGAAAGGAGAACTTGAATTA+TGG | 0.243969 | 6_4:+63323327 | Msa0992860:CDS |
| AGAAAGTAGAAGAGTGATAA+AGG | 0.247026 | 6_4:-63317781 | None:intergenic |
| TTCACACAACAAAACTGTTT+TGG | 0.255365 | 6_4:+63323064 | Msa0992860:CDS |
| AGCACACTTGATTCCTAGTT+TGG | 0.291076 | 6_4:-63323243 | None:intergenic |
| TTCCGATAAACGATTCATTC+AGG | 0.315188 | 6_4:+63323157 | Msa0992860:CDS |
| GTCGATTACCCTGGATAATA+AGG | 0.320746 | 6_4:-63322394 | None:intergenic |
| AGAATTTGACCCGTCGAATA+TGG | 0.336104 | 6_4:+63322288 | Msa0992860:CDS |
| GCACCTTATCAATCATTTCA+TGG | 0.336154 | 6_4:+63319856 | Msa0992860:CDS |
| CCTCTTCAAGCCGTAGTTCA+AGG | 0.345242 | 6_4:+63317727 | Msa0992860:CDS |
| TCAAAAGACCTCTCGATTGC+TGG | 0.361792 | 6_4:+63323020 | Msa0992860:CDS |
| TTCCTGAATGAATCGTTTAT+CGG | 0.368687 | 6_4:-63323159 | None:intergenic |
| GAAAGGAGAACTTGAATTAT+GGG | 0.372458 | 6_4:+63323328 | Msa0992860:CDS |
| AACGATAGTATCTCAATTGC+AGG | 0.378929 | 6_4:-63322331 | None:intergenic |
| AGAAGAAGCGTAGGAGAAGA+AGG | 0.381677 | 6_4:-63317853 | None:intergenic |
| GAAAGTAGAAGAGTGATAAA+GGG | 0.384830 | 6_4:-63317780 | None:intergenic |
| AGTTCTCCTTTCTCGCTATA+AGG | 0.388101 | 6_4:-63323317 | None:intergenic |
| AAAACAAACACACACTCATT+TGG | 0.390361 | 6_4:+63317460 | None:intergenic |
| AAATCCCTCTAGTTATTGAT+AGG | 0.392176 | 6_4:+63323456 | Msa0992860:CDS |
| AAGAAGAAGGTGGTTCAGAT+TGG | 0.393811 | 6_4:-63317660 | None:intergenic |
| CTCTAGTTATTGATAGGATT+CGG | 0.409149 | 6_4:+63323462 | Msa0992860:CDS |
| AGAAGAAGGTGGTTCAGATT+GGG | 0.409577 | 6_4:-63317659 | None:intergenic |
| GCACCCGTCTTATTCTATTT+CGG | 0.410492 | 6_4:-63323196 | None:intergenic |
| CATGTTAAGTTTAATCCTCA+TGG | 0.411093 | 6_4:+63318018 | Msa0992860:CDS |
| CTTGACTAAATGCTTGTTCA+AGG | 0.411999 | 6_4:-63322752 | None:intergenic |
| GTCCCTACACCTTATTATCC+AGG | 0.416731 | 6_4:+63322385 | Msa0992860:CDS |
| ATTGCTGACGAAGTATTTGC+AGG | 0.422387 | 6_4:+63322903 | Msa0992860:CDS |
| AGCCGCGTTCATATAGTATA+CGG | 0.426140 | 6_4:+63322993 | Msa0992860:CDS |
| GATGATTCTCTTTATTATGT+TGG | 0.428695 | 6_4:+63317967 | Msa0992860:CDS |
| AGGAACGATGAGTTTCATTC+CGG | 0.428810 | 6_4:-63317707 | None:intergenic |
| TTGGGTTTGGGTCATTGACC+CGG | 0.433153 | 6_4:-63317611 | None:intergenic |
| ACCGTTGCGACCTTGAACTA+CGG | 0.437014 | 6_4:-63317737 | None:intergenic |
| ATCAGACCTTATAGCGAGAA+AGG | 0.438192 | 6_4:+63323311 | Msa0992860:CDS |
| GAAAGGAGAGGAGAAGAAGA+AGG | 0.446308 | 6_4:-63317527 | None:intergenic |
| AATGAGTGAGTGAGAGAGAA+AGG | 0.448306 | 6_4:-63317554 | None:intergenic |
| AAAGGAGAGGAGAAGAAGAA+GGG | 0.455083 | 6_4:-63317526 | None:intergenic |
| TCATCCTCTCCCTCTCGAAC+CGG | 0.457560 | 6_4:+63317688 | Msa0992860:CDS |
| ATGCAATGGCAAGCCGATCC+AGG | 0.473529 | 6_4:-63323386 | None:intergenic |
| ACGGGTGCACGATGAGTTTG+TGG | 0.475034 | 6_4:+63323211 | Msa0992860:CDS |
| GAACTTGGAGGGATCAATGA+TGG | 0.475995 | 6_4:+63319798 | Msa0992860:CDS |
| GCTAAGATAAATATAACTCC+TGG | 0.479435 | 6_4:+63323368 | Msa0992860:CDS |
| GAAGAAGCGTAGGAGAAGAA+GGG | 0.481488 | 6_4:-63317852 | None:intergenic |
| AATCCATGAAATGATTGATA+AGG | 0.482294 | 6_4:-63319859 | None:intergenic |
| CCGTCTTATTCTATTTCGGT+TGG | 0.485045 | 6_4:-63323192 | None:intergenic |
| GGTGTCAGAATATTGCCAAC+AGG | 0.485404 | 6_4:-63322828 | None:intergenic |
| GGATTAAACTTAACATGATA+AGG | 0.486687 | 6_4:-63318012 | None:intergenic |
| GATTGGTATGGTGTGGTTGA+AGG | 0.487037 | 6_4:-63317578 | None:intergenic |
| TCAGTACTTCGACAGTGAAC+AGG | 0.488659 | 6_4:-63322705 | None:intergenic |
| ATATTGCCAACAGGATTTGA+AGG | 0.489937 | 6_4:-63322819 | None:intergenic |
| GTATTGTTATTATTATTCTC+AGG | 0.491598 | 6_4:-63317829 | None:intergenic |
| CATTCCGGTTCGAGAGGGAG+AGG | 0.492695 | 6_4:-63317692 | None:intergenic |
| GAACGAGGAAGAAGAAGCGT+AGG | 0.498041 | 6_4:-63317862 | None:intergenic |
| AACAAGTGTGATGGTGATGA+TGG | 0.502662 | 6_4:-63317496 | None:intergenic |
| GTAGCGCCGGTATGTTCTGT+TGG | 0.504601 | 6_4:+63323270 | Msa0992860:CDS |
| TAGCGCCGGTATGTTCTGTT+GGG | 0.508470 | 6_4:+63323271 | Msa0992860:CDS |
| AGGGACGTAAGATGGCGTCC+AGG | 0.510730 | 6_4:+63322669 | Msa0992860:intron |
| ATTGGTATGGTGTGGTTGAA+GGG | 0.514418 | 6_4:-63317577 | None:intergenic |
| AAGAAGCGTAGGAGAAGAAG+GGG | 0.514986 | 6_4:-63317851 | None:intergenic |
| ATGTTAAGTTTAATCCTCAT+GGG | 0.515359 | 6_4:+63318019 | Msa0992860:CDS |
| TCGAATATGGTACTAACATC+GGG | 0.516054 | 6_4:+63322301 | Msa0992860:CDS |
| GTTTGGATTTGATTGAGAAA+TGG | 0.516654 | 6_4:+63319767 | Msa0992860:CDS |
| GAAATGGTTGGTGAAGAACT+TGG | 0.517138 | 6_4:+63319783 | Msa0992860:CDS |
| AACTTGGAGGGATCAATGAT+GGG | 0.518854 | 6_4:+63319799 | Msa0992860:CDS |
| TGAGATACTATCGTTCTGCT+TGG | 0.519831 | 6_4:+63322339 | Msa0992860:CDS |
| CCTCATGGGATTATTCAGCT+TGG | 0.520803 | 6_4:+63318033 | Msa0992860:CDS |
| GTGGATTGTTTAACCAAACT+AGG | 0.523731 | 6_4:+63323230 | Msa0992860:CDS |
| GTATTTGCAGGCTCCACGTA+CGG | 0.524369 | 6_4:+63322915 | Msa0992860:CDS |
| CGTTCGAATTTATCATCTCG+TGG | 0.535040 | 6_4:+63317892 | Msa0992860:CDS |
| GCTTTGACAGGGACGTAAGA+TGG | 0.539978 | 6_4:+63322661 | Msa0992860:intron |
| GATAAATATAACTCCTGGAT+CGG | 0.540003 | 6_4:+63323373 | Msa0992860:CDS |
| TTTAGTGGATTGGTATGGTG+TGG | 0.546076 | 6_4:-63317585 | None:intergenic |
| ACCATCCTGGTTCTATGCAA+TGG | 0.546338 | 6_4:-63323400 | None:intergenic |
| TGGGTTTGGGTCATTGACCC+GGG | 0.546981 | 6_4:-63317610 | None:intergenic |
| GCTTGGTTTGTCTGATAACA+AGG | 0.548963 | 6_4:+63318050 | Msa0992860:CDS |
| GATAATAAGGTGTAGGGACA+AGG | 0.549163 | 6_4:-63322381 | None:intergenic |
| TGAGAGAGAAAGGAAAGGAA+AGG | 0.553080 | 6_4:-63317544 | None:intergenic |
| TCGATTGCTGGATTTAGAGT+CGG | 0.555133 | 6_4:+63323032 | Msa0992860:CDS |
| GAGTTTCATTCCGGTTCGAG+AGG | 0.556125 | 6_4:-63317698 | None:intergenic |
| TATTGCCAACAGGATTTGAA+GGG | 0.556392 | 6_4:-63322818 | None:intergenic |
| GAGGATGAAGAAGAAGAAGA+AGG | 0.556434 | 6_4:-63317673 | None:intergenic |
| GGAGAGGAGAAGAAGAAGGG+AGG | 0.559626 | 6_4:-63317523 | None:intergenic |
| GAGAAAGGAAAGGAAAGGAG+AGG | 0.562092 | 6_4:-63317539 | None:intergenic |
| ACAGGTATTAAGTCTATCCC+TGG | 0.566102 | 6_4:-63322687 | None:intergenic |
| TCCCTACACCTTATTATCCA+GGG | 0.567075 | 6_4:+63322386 | Msa0992860:CDS |
| GGATTTGATTGAGAAATGGT+TGG | 0.569337 | 6_4:+63319771 | Msa0992860:CDS |
| AGTGTGATGGTGATGATGGA+TGG | 0.569574 | 6_4:-63317492 | None:intergenic |
| GAAGTAACTAACCTCTGTGT+TGG | 0.575820 | 6_4:-63323128 | None:intergenic |
| GCCATTGCATAGAACCAGGA+TGG | 0.576139 | 6_4:+63323399 | Msa0992860:CDS |
| ATATTCTGAATCGAGAACTT+CGG | 0.576552 | 6_4:-63322961 | None:intergenic |
| TTCTGTTGGGCTGATATGAG+TGG | 0.577234 | 6_4:+63323284 | Msa0992860:CDS |
| AAACTCCTCGCTTCCGTACG+TGG | 0.582162 | 6_4:-63322928 | None:intergenic |
| ATGGTTGGTGAAGAACTTGG+AGG | 0.582724 | 6_4:+63319786 | Msa0992860:CDS |
| ACCCTGGATAATAAGGTGTA+GGG | 0.583042 | 6_4:-63322387 | None:intergenic |
| CGAATCCTATCAATAACTAG+AGG | 0.584201 | 6_4:-63323461 | None:intergenic |
| TCGTTCTGCTTGGCAGACCA+TGG | 0.585867 | 6_4:+63322349 | Msa0992860:CDS |
| AAACGAGGAGTCAAAGTTCG+CGG | 0.587306 | 6_4:+63322780 | Msa0992860:CDS |
| AAGTGTGCTAAGAGTAGCGC+CGG | 0.588898 | 6_4:+63323257 | Msa0992860:CDS |
| TACCCTGGATAATAAGGTGT+AGG | 0.592046 | 6_4:-63322388 | None:intergenic |
| CAACCGAAATAGAATAAGAC+GGG | 0.592241 | 6_4:+63323193 | Msa0992860:CDS |
| GTGAGTGAGAGAGAAAGGAA+AGG | 0.595183 | 6_4:-63317549 | None:intergenic |
| AAACAAATACGAAACCATCC+TGG | 0.595378 | 6_4:-63323413 | None:intergenic |
| GGGACGTAAGATGGCGTCCA+GGG | 0.596829 | 6_4:+63322670 | Msa0992860:intron |
| TTGACTAAATGCTTGTTCAA+GGG | 0.597175 | 6_4:-63322751 | None:intergenic |
| TCGAACCCTTCAAATCCTGT+TGG | 0.599882 | 6_4:+63322813 | Msa0992860:CDS |
| GGACAAGGAATGCATTTCCA+TGG | 0.601989 | 6_4:-63322366 | None:intergenic |
| GGAGGAAGAAACAAGTGTGA+TGG | 0.605618 | 6_4:-63317505 | None:intergenic |
| AGTTTCATTCCGGTTCGAGA+GGG | 0.606450 | 6_4:-63317697 | None:intergenic |
| CTCTAAATCCAGCAATCGAG+AGG | 0.607302 | 6_4:-63323028 | None:intergenic |
| GCTTGCCATTGCATAGAACC+AGG | 0.608825 | 6_4:+63323395 | Msa0992860:CDS |
| GCCGTAGTTCAAGGTCGCAA+CGG | 0.614336 | 6_4:+63317736 | Msa0992860:CDS |
| TTTATGCATCAGGTTATGGG+AGG | 0.621158 | 6_4:+63322259 | Msa0992860:CDS |
| AGGCTCCACGTACGGAAGCG+AGG | 0.623216 | 6_4:+63322923 | Msa0992860:CDS |
| CCTTGAACTACGGCTTGAAG+AGG | 0.628674 | 6_4:-63317727 | None:intergenic |
| GTCGAATATGGTACTAACAT+CGG | 0.632417 | 6_4:+63322300 | Msa0992860:CDS |
| CCAACCGAAATAGAATAAGA+CGG | 0.633080 | 6_4:+63323192 | Msa0992860:CDS |
| ATGTTAGTACCATATTCGAC+GGG | 0.633455 | 6_4:-63322297 | None:intergenic |
| GATGTTAGTACCATATTCGA+CGG | 0.633600 | 6_4:-63322298 | None:intergenic |
| TGGTTGGTGAAGAACTTGGA+GGG | 0.633885 | 6_4:+63319787 | Msa0992860:CDS |
| ATCAGCCCAACAGAACATAC+CGG | 0.634233 | 6_4:-63323276 | None:intergenic |
| GAATCCTATCAATAACTAGA+GGG | 0.646614 | 6_4:-63323460 | None:intergenic |
| TTTAGTCAAGCAAGAAAACG+AGG | 0.661177 | 6_4:+63322765 | Msa0992860:CDS |
| ACTTGGAGGGATCAATGATG+GGG | 0.673771 | 6_4:+63319800 | Msa0992860:CDS |
| ATAAAGGGATTAAACTACCG+AGG | 0.687862 | 6_4:-63317765 | None:intergenic |
| CCAAGCTGAATAATCCCATG+AGG | 0.701633 | 6_4:-63318033 | None:intergenic |
| TTCGAACGAGAAGAAGAACG+AGG | 0.751950 | 6_4:-63317877 | None:intergenic |
| GGCCGTATACTATATGAACG+CGG | 0.756649 | 6_4:-63322995 | None:intergenic |
| CTATATCTGCACCAACACAG+AGG | 0.756871 | 6_4:+63323117 | Msa0992860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTGTTATAAAAATGT+TGG | + | chr6_4:63318516-63318535 | Msa0992860:intron | 10.0% |
| !!! | AAAAAATGTTTGTTTTTTTT+TGG | + | chr6_4:63318727-63318746 | Msa0992860:intron | 10.0% |
| !! | AAAAATTATAAAATCCATAT+TGG | - | chr6_4:63318851-63318870 | None:intergenic | 10.0% |
| !!! | TTTAAGATGAATAATTTTAT+AGG | + | chr6_4:63321126-63321145 | Msa0992860:intron | 10.0% |
| !! | TCTAATTAAAATTAAAATGT+CGG | - | chr6_4:63321595-63321614 | None:intergenic | 10.0% |
| !! | ATGTATAAAAACTATTTATA+AGG | + | chr6_4:63322548-63322567 | Msa0992860:intron | 10.0% |
| !!! | TTTTGTTTAATGATTGTTTT+CGG | + | chr6_4:63318099-63318118 | Msa0992860:intron | 15.0% |
| !!! | TTTTTGGTTAAAATAAATGT+TGG | + | chr6_4:63318143-63318162 | Msa0992860:intron | 15.0% |
| !!! | AAAATGTTTATGTTGTTATT+TGG | + | chr6_4:63318271-63318290 | Msa0992860:intron | 15.0% |
| !! | TTATTTGGTTAAAAAAATGT+TGG | + | chr6_4:63318286-63318305 | Msa0992860:intron | 15.0% |
| !!! | AAAAACACTTTGAAATATTT+CGG | - | chr6_4:63318367-63318386 | None:intergenic | 15.0% |
| !!! | TTTTATAATCCAAAATGAAT+AGG | + | chr6_4:63318421-63318440 | Msa0992860:intron | 15.0% |
| !! | TTTATAATCCAAAATGAATA+GGG | + | chr6_4:63318422-63318441 | Msa0992860:intron | 15.0% |
| !!! | TTTTTTGGTTATAAAAATGT+TGG | + | chr6_4:63318742-63318761 | Msa0992860:intron | 15.0% |
| !! | AAATTGTAAATGACTAAATT+GGG | - | chr6_4:63318978-63318997 | None:intergenic | 15.0% |
| !! | AAAATTGTAAATGACTAAAT+TGG | - | chr6_4:63318979-63318998 | None:intergenic | 15.0% |
| !!! | TTTAGTCATTTACAATTTTT+CGG | + | chr6_4:63318980-63318999 | Msa0992860:intron | 15.0% |
| !! | AAAATATCAACAACAAATTT+GGG | - | chr6_4:63319026-63319045 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTGGTTTTAATTT+TGG | + | chr6_4:63319717-63319736 | Msa0992860:intron | 15.0% |
| !!! | TTTTGTTTGGTTTTAATTTT+GGG | + | chr6_4:63319718-63319737 | Msa0992860:intron | 15.0% |
| !! | TGTTATCATTAAATATTAAG+TGG | + | chr6_4:63320814-63320833 | Msa0992860:intron | 15.0% |
| !! | ACAAAATTGCTAAAATTTAT+GGG | - | chr6_4:63320911-63320930 | None:intergenic | 15.0% |
| !! | TACAAAATTGCTAAAATTTA+TGG | - | chr6_4:63320912-63320931 | None:intergenic | 15.0% |
| !!! | TGATGATGATTTTTAAATTT+TGG | + | chr6_4:63321007-63321026 | Msa0992860:intron | 15.0% |
| !! | AAGACAAGTTTATATTTAAA+TGG | + | chr6_4:63321898-63321917 | Msa0992860:intron | 15.0% |
| !!! | GTATTGTTATTATTATTCTC+AGG | - | chr6_4:63317832-63317851 | None:intergenic | 20.0% |
| !!! | ACAATGTTTATGTTGTTTTT+TGG | + | chr6_4:63318127-63318146 | Msa0992860:intron | 20.0% |
| !! | AGTTTATAGCTAGTATTAAT+TGG | + | chr6_4:63318188-63318207 | Msa0992860:intron | 20.0% |
| !! | AAAAACAGGTTAAAACATTT+CGG | - | chr6_4:63318597-63318616 | None:intergenic | 20.0% |
| !!! | TTTTATAGTCCAAAATGAAT+AGG | + | chr6_4:63318651-63318670 | Msa0992860:intron | 20.0% |
| !! | TTTATAGTCCAAAATGAATA+GGG | + | chr6_4:63318652-63318671 | Msa0992860:intron | 20.0% |
| !! | GAAAATATCAACAACAAATT+TGG | - | chr6_4:63319027-63319046 | None:intergenic | 20.0% |
| !!! | TCTGTTTTGTTTTATTAGAA+TGG | + | chr6_4:63319067-63319086 | Msa0992860:intron | 20.0% |
| !!! | TTTTGTTTTATTAGAATGGA+GGG | + | chr6_4:63319071-63319090 | Msa0992860:intron | 20.0% |
| !!! | TAAAACCACATTTTCATAAT+GGG | - | chr6_4:63319108-63319127 | None:intergenic | 20.0% |
| !!! | ATAAAACCACATTTTCATAA+TGG | - | chr6_4:63319109-63319128 | None:intergenic | 20.0% |
| !! | AAATTTGTAAGAACCAATTT+GGG | - | chr6_4:63319439-63319458 | None:intergenic | 20.0% |
| !! | AAAATTTGTAAGAACCAATT+TGG | - | chr6_4:63319440-63319459 | None:intergenic | 20.0% |
| !! | AAAATTGTGATGTATCAAAT+TGG | + | chr6_4:63319619-63319638 | Msa0992860:intron | 20.0% |
| !! | AAATTGTGATGTATCAAATT+GGG | + | chr6_4:63319620-63319639 | Msa0992860:intron | 20.0% |
| !!! | TTTTTTTTTCTCTCTTTTTC+TGG | + | chr6_4:63319673-63319692 | Msa0992860:intron | 20.0% |
| !!! | TTTTTTTTCTCTCTTTTTCT+GGG | + | chr6_4:63319674-63319693 | Msa0992860:intron | 20.0% |
| !! | GATATCAATTTGAGTATAAA+TGG | + | chr6_4:63319829-63319848 | Msa0992860:CDS | 20.0% |
| !!! | TTTCTCATATAGTTTTTTCT+AGG | - | chr6_4:63320360-63320379 | None:intergenic | 20.0% |
| !! | AACTATATGAGAAACTATTA+AGG | + | chr6_4:63320366-63320385 | Msa0992860:intron | 20.0% |
| !! | TAGAGATTAATGAGTTATAT+AGG | + | chr6_4:63320392-63320411 | Msa0992860:intron | 20.0% |
| !! | AGAGATTAATGAGTTATATA+GGG | + | chr6_4:63320393-63320412 | Msa0992860:intron | 20.0% |
| !! | TGATATATCATTGAACATTA+TGG | + | chr6_4:63320419-63320438 | Msa0992860:intron | 20.0% |
| !!! | TTTGAACAAAACACTATTTT+CGG | - | chr6_4:63320584-63320603 | None:intergenic | 20.0% |
| !! | TAATTAAAATTAAGCACAAG+AGG | - | chr6_4:63320965-63320984 | None:intergenic | 20.0% |
| !! | CTTCTAGTATAATTGATTAA+TGG | - | chr6_4:63321106-63321125 | None:intergenic | 20.0% |
| !!! | TTAATTTTGTTACAACTGAT+GGG | + | chr6_4:63321665-63321684 | Msa0992860:intron | 20.0% |
| !! | AATAAAGTTAGATAGAAAGT+TGG | + | chr6_4:63321715-63321734 | Msa0992860:intron | 20.0% |
| !! | TGATACATAATAAGACATTA+TGG | + | chr6_4:63322044-63322063 | Msa0992860:intron | 20.0% |
| !!! | TGAATTTTGTTGATTTAGTT+AGG | + | chr6_4:63322168-63322187 | Msa0992860:intron | 20.0% |
| !!! | TTAAACTATTGATTCCTATT+TGG | + | chr6_4:63322426-63322445 | Msa0992860:intron | 20.0% |
| !!! | TAAACTATTGATTCCTATTT+GGG | + | chr6_4:63322427-63322446 | Msa0992860:intron | 20.0% |
| ! | GATGATTCTCTTTATTATGT+TGG | + | chr6_4:63317967-63317986 | Msa0992860:CDS | 25.0% |
| ! | GGATTAAACTTAACATGATA+AGG | - | chr6_4:63318015-63318034 | None:intergenic | 25.0% |
| ! | ATGTTAAGTTTAATCCTCAT+GGG | + | chr6_4:63318019-63318038 | Msa0992860:CDS | 25.0% |
| !!! | ATATTTCAAAGTGTTTTTCG+AGG | + | chr6_4:63318369-63318388 | Msa0992860:intron | 25.0% |
| ! | AAAAACACGTTGAAACATTT+CGG | - | chr6_4:63318819-63318838 | None:intergenic | 25.0% |
| !!! | GTTTTGTTTTATTAGAATGG+AGG | + | chr6_4:63319070-63319089 | Msa0992860:intron | 25.0% |
| !! | AAAACCACATTTTCATAATG+GGG | - | chr6_4:63319107-63319126 | None:intergenic | 25.0% |
| !! | TTTTATCTTTGAGTGTCTAA+GGG | + | chr6_4:63319123-63319142 | Msa0992860:intron | 25.0% |
| !! | TTTTGAATAAAGACCCAAAT+TGG | + | chr6_4:63319423-63319442 | Msa0992860:intron | 25.0% |
| ! | AATCCATGAAATGATTGATA+AGG | - | chr6_4:63319862-63319881 | None:intergenic | 25.0% |
| ! | TATATCATTGAACATTATGG+TGG | + | chr6_4:63320422-63320441 | Msa0992860:intron | 25.0% |
| ! | ATCAACAACACTTAAATAAG+TGG | - | chr6_4:63320552-63320571 | None:intergenic | 25.0% |
| !!! | TAACTACACTGCTTATTTTA+AGG | + | chr6_4:63320725-63320744 | Msa0992860:intron | 25.0% |
| ! | AAAAGCTAAATATCAACACA+CGG | - | chr6_4:63320767-63320786 | None:intergenic | 25.0% |
| !!! | TGTGTTGATATTTAGCTTTT+AGG | + | chr6_4:63320767-63320786 | Msa0992860:intron | 25.0% |
| !!! | GATATTTAGCTTTTAGGTAT+TGG | + | chr6_4:63320773-63320792 | Msa0992860:intron | 25.0% |
| ! | TTATAGGATTTCTAACATTC+TGG | + | chr6_4:63321142-63321161 | Msa0992860:intron | 25.0% |
| ! | GGAAATATGGATATTATTAG+AGG | - | chr6_4:63321177-63321196 | None:intergenic | 25.0% |
| ! | GATTCTCTTATTAATGTACA+GGG | + | chr6_4:63321522-63321541 | Msa0992860:intron | 25.0% |
| !! | TAATTTTGTTACAACGAAAC+AGG | + | chr6_4:63321642-63321661 | Msa0992860:intron | 25.0% |
| !! | GTTAATTTTGTTACAACTGA+TGG | + | chr6_4:63321664-63321683 | Msa0992860:intron | 25.0% |
| !! | TAATTTTGTTACAACTGATG+GGG | + | chr6_4:63321666-63321685 | Msa0992860:intron | 25.0% |
| ! | TTAACAGACAAACAAAACAA+CGG | - | chr6_4:63322199-63322218 | None:intergenic | 25.0% |
| ! | TTTGTTTGTCTGTTAAACTT+TGG | + | chr6_4:63322203-63322222 | Msa0992860:intron | 25.0% |
| ! | CATTTCTCTTAAAAGAAGTT+AGG | + | chr6_4:63322476-63322495 | Msa0992860:intron | 25.0% |
| !!! | TGAAAATCTGCTCATTTTTT+TGG | - | chr6_4:63323096-63323115 | None:intergenic | 25.0% |
| GAAAGTAGAAGAGTGATAAA+GGG | - | chr6_4:63317783-63317802 | None:intergenic | 30.0% | |
| AGAAAGTAGAAGAGTGATAA+AGG | - | chr6_4:63317784-63317803 | None:intergenic | 30.0% | |
| CATGTTAAGTTTAATCCTCA+TGG | + | chr6_4:63318018-63318037 | Msa0992860:CDS | 30.0% | |
| CTAGCTATAAACTCATAAGA+TGG | - | chr6_4:63318181-63318200 | None:intergenic | 30.0% | |
| ! | TTTTATAATCCGAACTGCAT+AGG | + | chr6_4:63318212-63318231 | Msa0992860:intron | 30.0% |
| TTTATAATCCGAACTGCATA+GGG | + | chr6_4:63318213-63318232 | Msa0992860:intron | 30.0% | |
| TCATAGGGTGGAAAAAATAA+CGG | - | chr6_4:63318312-63318331 | None:intergenic | 30.0% | |
| !!! | ATGTTTTAACCTGTTTTTCG+AGG | + | chr6_4:63318599-63318618 | Msa0992860:intron | 30.0% |
| ! | GAAATGTTTCAACGTGTTTT+TGG | + | chr6_4:63318818-63318837 | Msa0992860:intron | 30.0% |
| !!! | TTTTTGGAGTTATGCCAATA+TGG | + | chr6_4:63318834-63318853 | Msa0992860:intron | 30.0% |
| ! | TTTTATAATCCGAACTGCAT+AGG | + | chr6_4:63318212-63318231 | Msa0992860:intron | 30.0% |
| TTTATAATCCGAACTGCATA+GGG | + | chr6_4:63318213-63318232 | Msa0992860:intron | 30.0% | |
| ! | GTTTTATCTTTGAGTGTCTA+AGG | + | chr6_4:63319122-63319141 | Msa0992860:intron | 30.0% |
| TTTATCTTTGAGTGTCTAAG+GGG | + | chr6_4:63319124-63319143 | Msa0992860:intron | 30.0% | |
| ! | GTATTATCGATAACTTGTCA+AGG | + | chr6_4:63319212-63319231 | Msa0992860:intron | 30.0% |
| ! | TGTGATGATACAATTTTCGT+TGG | + | chr6_4:63319255-63319274 | Msa0992860:intron | 30.0% |
| TGTCATGACATGAACTAATT+TGG | + | chr6_4:63319560-63319579 | Msa0992860:intron | 30.0% | |
| ! | ATTTTATGTCGCGACTAAAT+TGG | + | chr6_4:63319588-63319607 | Msa0992860:intron | 30.0% |
| !!! | TTTGGGTTTTTGTTGTTTTG+TGG | + | chr6_4:63319735-63319754 | Msa0992860:intron | 30.0% |
| GTTTGGATTTGATTGAGAAA+TGG | + | chr6_4:63319767-63319786 | Msa0992860:CDS | 30.0% | |
| TTATCATACAGCTGTAAAAC+CGG | + | chr6_4:63319990-63320009 | Msa0992860:intron | 30.0% | |
| TAAAACCGGTAATGTTGTAT+GGG | + | chr6_4:63320004-63320023 | Msa0992860:intron | 30.0% | |
| AGTAAGGAGAGTAGATAAAA+TGG | + | chr6_4:63320302-63320321 | Msa0992860:intron | 30.0% | |
| ! | TGCATTGTATTTTGCTTAGA+GGG | + | chr6_4:63320501-63320520 | Msa0992860:intron | 30.0% |
| AATGTTATATCAGTGTTGTG+TGG | - | chr6_4:63320612-63320631 | None:intergenic | 30.0% | |
| TTTGGAGAATTGAAGATTGA+AGG | + | chr6_4:63321025-63321044 | Msa0992860:intron | 30.0% | |
| TTGGAGAATTGAAGATTGAA+GGG | + | chr6_4:63321026-63321045 | Msa0992860:intron | 30.0% | |
| ACAACTATGTATGGGAAATA+TGG | - | chr6_4:63321190-63321209 | None:intergenic | 30.0% | |
| ATATAACCTTGTTAGCTGAA+TGG | + | chr6_4:63321404-63321423 | Msa0992860:intron | 30.0% | |
| TAAAAACCATTCAGCTAACA+AGG | - | chr6_4:63321413-63321432 | None:intergenic | 30.0% | |
| CGATTCTCTTATTAATGTAC+AGG | + | chr6_4:63321521-63321540 | Msa0992860:intron | 30.0% | |
| AAGCGTGTTTATATTCAAAC+CGG | - | chr6_4:63321556-63321575 | None:intergenic | 30.0% | |
| !! | TAGAGTTATTTGCTGTCTTA+AGG | + | chr6_4:63321611-63321630 | Msa0992860:intron | 30.0% |
| ! | AATTTTGTTACAACTGATGG+GGG | + | chr6_4:63321667-63321686 | Msa0992860:intron | 30.0% |
| ACACAAAACAAGTTAGGATT+AGG | + | chr6_4:63321692-63321711 | Msa0992860:intron | 30.0% | |
| ACAAGTCATTCTTGAAAAGA+TGG | + | chr6_4:63321742-63321761 | Msa0992860:intron | 30.0% | |
| AGTTCAATAGTTAGAGAAAG+AGG | + | chr6_4:63321844-63321863 | Msa0992860:intron | 30.0% | |
| ! | ATCTAACCTATAGTTTTCCA+TGG | - | chr6_4:63321874-63321893 | None:intergenic | 30.0% |
| TTGTCAAATAGCCACTATTA+TGG | + | chr6_4:63321967-63321986 | Msa0992860:intron | 30.0% | |
| TGTCTAATGATCACAGAAAA+TGG | - | chr6_4:63322024-63322043 | None:intergenic | 30.0% | |
| ! | AGATTTTATGCATCAGGTTA+TGG | + | chr6_4:63322255-63322274 | Msa0992860:CDS | 30.0% |
| ! | GATTTTATGCATCAGGTTAT+GGG | + | chr6_4:63322256-63322275 | Msa0992860:CDS | 30.0% |
| TTGACTAAATGCTTGTTCAA+GGG | - | chr6_4:63322754-63322773 | None:intergenic | 30.0% | |
| ATATTCTGAATCGAGAACTT+CGG | - | chr6_4:63322964-63322983 | None:intergenic | 30.0% | |
| ! | TTCACACAACAAAACTGTTT+TGG | + | chr6_4:63323064-63323083 | Msa0992860:CDS | 30.0% |
| TTCCTGAATGAATCGTTTAT+CGG | - | chr6_4:63323162-63323181 | None:intergenic | 30.0% | |
| AGAAAGGAGAACTTGAATTA+TGG | + | chr6_4:63323327-63323346 | Msa0992860:CDS | 30.0% | |
| GAAAGGAGAACTTGAATTAT+GGG | + | chr6_4:63323328-63323347 | Msa0992860:CDS | 30.0% | |
| GCTAAGATAAATATAACTCC+TGG | + | chr6_4:63323368-63323387 | Msa0992860:CDS | 30.0% | |
| GATAAATATAACTCCTGGAT+CGG | + | chr6_4:63323373-63323392 | Msa0992860:CDS | 30.0% | |
| ! | TTTTACAACTATATCGTTCG+AGG | + | chr6_4:63323433-63323452 | Msa0992860:CDS | 30.0% |
| AAATCCCTCTAGTTATTGAT+AGG | + | chr6_4:63323456-63323475 | Msa0992860:CDS | 30.0% | |
| GAATCCTATCAATAACTAGA+GGG | - | chr6_4:63323463-63323482 | None:intergenic | 30.0% | |
| CTCTAGTTATTGATAGGATT+CGG | + | chr6_4:63323462-63323481 | Msa0992860:CDS | 30.0% | |
| ATACCAATCCACTAAAAACC+CGG | + | chr6_4:63317592-63317611 | Msa0992860:five_prime_UTR | 35.0% | |
| !!! | GTTCAGATTGGGTTTTTTTG+GGG | - | chr6_4:63317651-63317670 | None:intergenic | 35.0% |
| !!! | GGTTCAGATTGGGTTTTTTT+GGG | - | chr6_4:63317652-63317671 | None:intergenic | 35.0% |
| !!! | TGGTTCAGATTGGGTTTTTT+TGG | - | chr6_4:63317653-63317672 | None:intergenic | 35.0% |
| ATAAAGGGATTAAACTACCG+AGG | - | chr6_4:63317768-63317787 | None:intergenic | 35.0% | |
| ACTCATAGGGTGAAAAAAGT+AGG | + | chr6_4:63318246-63318265 | Msa0992860:intron | 35.0% | |
| AGTTTCTTGCGCATCTTATT+TGG | + | chr6_4:63318331-63318350 | Msa0992860:intron | 35.0% | |
| TCCAAAATGAATAGGGTGAA+CGG | + | chr6_4:63318429-63318448 | Msa0992860:intron | 35.0% | |
| ! | TCATGTGGTGGAAAAAGTAA+CGG | - | chr6_4:63318542-63318561 | None:intergenic | 35.0% |
| AGTTTCTTGCGCATCTTATT+TGG | + | chr6_4:63318331-63318350 | Msa0992860:intron | 35.0% | |
| CTGTAAAAACCTCGAAAAAC+AGG | - | chr6_4:63318381-63318400 | None:intergenic | 35.0% | |
| TCCAAAATGAATAGGGTGAA+CGG | + | chr6_4:63318429-63318448 | Msa0992860:intron | 35.0% | |
| CATAGGGTGGAAAAAAGTAA+CGG | - | chr6_4:63318768-63318787 | None:intergenic | 35.0% | |
| TTTGCCATGAGAAAATTGTG+CGG | + | chr6_4:63319370-63319389 | Msa0992860:intron | 35.0% | |
| AAAATTGTGCGGGATCAAAA+TGG | + | chr6_4:63319381-63319400 | Msa0992860:intron | 35.0% | |
| AAATTGTGCGGGATCAAAAT+GGG | + | chr6_4:63319382-63319401 | Msa0992860:intron | 35.0% | |
| ! | TTTTGTGGTGTAGTTGAGTT+TGG | + | chr6_4:63319750-63319769 | Msa0992860:intron | 35.0% |
| GGATTTGATTGAGAAATGGT+TGG | + | chr6_4:63319771-63319790 | Msa0992860:CDS | 35.0% | |
| GCACCTTATCAATCATTTCA+TGG | + | chr6_4:63319856-63319875 | Msa0992860:CDS | 35.0% | |
| AAAAATACTGCTCAGACTGA+AGG | + | chr6_4:63319960-63319979 | Msa0992860:intron | 35.0% | |
| AAAATACTGCTCAGACTGAA+GGG | + | chr6_4:63319961-63319980 | Msa0992860:intron | 35.0% | |
| GTAAAACCGGTAATGTTGTA+TGG | + | chr6_4:63320003-63320022 | Msa0992860:intron | 35.0% | |
| TTTGTCCCATACAACATTAC+CGG | - | chr6_4:63320012-63320031 | None:intergenic | 35.0% | |
| !!! | CACTTATTTTACTCTCGTGT+CGG | - | chr6_4:63320122-63320141 | None:intergenic | 35.0% |
| CGAGAGTAAAATAAGTGTAG+AGG | + | chr6_4:63320125-63320144 | Msa0992860:intron | 35.0% | |
| GTCAATATTAGAGAGAGTTG+AGG | + | chr6_4:63320200-63320219 | Msa0992860:intron | 35.0% | |
| ! | GACCTGTAGATTTTGTAGTA+AGG | + | chr6_4:63320286-63320305 | Msa0992860:intron | 35.0% |
| CTCCTTACTACAAAATCTAC+AGG | - | chr6_4:63320291-63320310 | None:intergenic | 35.0% | |
| GAGAGTAGTCAAATCACTAA+AGG | + | chr6_4:63320324-63320343 | Msa0992860:intron | 35.0% | |
| ! | CTGCATTGTATTTTGCTTAG+AGG | + | chr6_4:63320500-63320519 | Msa0992860:intron | 35.0% |
| CACAATGAGAATAGGTGTTA+TGG | + | chr6_4:63320859-63320878 | Msa0992860:intron | 35.0% | |
| CAGGATTCACAACTATGTAT+GGG | - | chr6_4:63321198-63321217 | None:intergenic | 35.0% | |
| AATAGCGACTATAGCACTAT+AGG | - | chr6_4:63321258-63321277 | None:intergenic | 35.0% | |
| TTGTACTAAATAGTGTTCCG+CGG | + | chr6_4:63321288-63321307 | Msa0992860:intron | 35.0% | |
| !! | ACTAGCATTGGCTCAAATAT+GGG | - | chr6_4:63321380-63321399 | None:intergenic | 35.0% |
| !! | AACTAGCATTGGCTCAAATA+TGG | - | chr6_4:63321381-63321400 | None:intergenic | 35.0% |
| GGTTATATCTCAACTAGCAT+TGG | - | chr6_4:63321392-63321411 | None:intergenic | 35.0% | |
| AATGTACAGGGTAATTGTTC+CGG | + | chr6_4:63321534-63321553 | Msa0992860:intron | 35.0% | |
| !! | ATTTGCTGTCTTAAGGAAAC+AGG | + | chr6_4:63321618-63321637 | Msa0992860:intron | 35.0% |
| CACTATTAAGGTAGACTAGA+TGG | + | chr6_4:63321816-63321835 | Msa0992860:intron | 35.0% | |
| CTAATGATCACAGAAAATGG+CGG | - | chr6_4:63322021-63322040 | None:intergenic | 35.0% | |
| ! | AAACCTTTTCCCACTAGATA+GGG | - | chr6_4:63322080-63322099 | None:intergenic | 35.0% |
| ! | AAAACCTTTTCCCACTAGAT+AGG | - | chr6_4:63322081-63322100 | None:intergenic | 35.0% |
| !!! | GTTGTTTGCTATGATTTTGC+AGG | + | chr6_4:63322225-63322244 | Msa0992860:intron | 35.0% |
| ATGTTAGTACCATATTCGAC+GGG | - | chr6_4:63322300-63322319 | None:intergenic | 35.0% | |
| GATGTTAGTACCATATTCGA+CGG | - | chr6_4:63322301-63322320 | None:intergenic | 35.0% | |
| GTCGAATATGGTACTAACAT+CGG | + | chr6_4:63322300-63322319 | Msa0992860:CDS | 35.0% | |
| TCGAATATGGTACTAACATC+GGG | + | chr6_4:63322301-63322320 | Msa0992860:CDS | 35.0% | |
| AACGATAGTATCTCAATTGC+AGG | - | chr6_4:63322334-63322353 | None:intergenic | 35.0% | |
| TTATTATCCAGGGTAATCGA+CGG | + | chr6_4:63322396-63322415 | Msa0992860:intron | 35.0% | |
| CTTGACTAAATGCTTGTTCA+AGG | - | chr6_4:63322755-63322774 | None:intergenic | 35.0% | |
| TTTAGTCAAGCAAGAAAACG+AGG | + | chr6_4:63322765-63322784 | Msa0992860:CDS | 35.0% | |
| TATTGCCAACAGGATTTGAA+GGG | - | chr6_4:63322821-63322840 | None:intergenic | 35.0% | |
| ATATTGCCAACAGGATTTGA+AGG | - | chr6_4:63322822-63322841 | None:intergenic | 35.0% | |
| !! | AGAAGACTGAAAAGCATTTC+TGG | - | chr6_4:63322852-63322871 | None:intergenic | 35.0% |
| TTCCGATAAACGATTCATTC+AGG | + | chr6_4:63323157-63323176 | Msa0992860:CDS | 35.0% | |
| CCAACCGAAATAGAATAAGA+CGG | + | chr6_4:63323192-63323211 | Msa0992860:CDS | 35.0% | |
| CAACCGAAATAGAATAAGAC+GGG | + | chr6_4:63323193-63323212 | Msa0992860:CDS | 35.0% | |
| ! | GTGGATTGTTTAACCAAACT+AGG | + | chr6_4:63323230-63323249 | Msa0992860:CDS | 35.0% |
| AAACAAATACGAAACCATCC+TGG | - | chr6_4:63323416-63323435 | None:intergenic | 35.0% | |
| CGAATCCTATCAATAACTAG+AGG | - | chr6_4:63323464-63323483 | None:intergenic | 35.0% | |
| ! | AACAAGTGTGATGGTGATGA+TGG | - | chr6_4:63317499-63317518 | None:intergenic | 40.0% |
| AAAGGAGAGGAGAAGAAGAA+GGG | - | chr6_4:63317529-63317548 | None:intergenic | 40.0% | |
| TGAGAGAGAAAGGAAAGGAA+AGG | - | chr6_4:63317547-63317566 | None:intergenic | 40.0% | |
| AATGAGTGAGTGAGAGAGAA+AGG | - | chr6_4:63317557-63317576 | None:intergenic | 40.0% | |
| ATTGGTATGGTGTGGTTGAA+GGG | - | chr6_4:63317580-63317599 | None:intergenic | 40.0% | |
| !! | TTTAGTGGATTGGTATGGTG+TGG | - | chr6_4:63317588-63317607 | None:intergenic | 40.0% |
| !!! | GGGTTTTTAGTGGATTGGTA+TGG | - | chr6_4:63317593-63317612 | None:intergenic | 40.0% |
| TACCAATCCACTAAAAACCC+GGG | + | chr6_4:63317593-63317612 | Msa0992860:five_prime_UTR | 40.0% | |
| !!! | GGTGGGTTTTTTTTGGGTTT+GGG | - | chr6_4:63317626-63317645 | None:intergenic | 40.0% |
| !!! | TGGTGGGTTTTTTTTGGGTT+TGG | - | chr6_4:63317627-63317646 | None:intergenic | 40.0% |
| !!! | AGATTGGGTTTTTTTGGGGT+TGG | - | chr6_4:63317647-63317666 | None:intergenic | 40.0% |
| AGAAGAAGGTGGTTCAGATT+GGG | - | chr6_4:63317662-63317681 | None:intergenic | 40.0% | |
| AAGAAGAAGGTGGTTCAGAT+TGG | - | chr6_4:63317663-63317682 | None:intergenic | 40.0% | |
| GATGAAGAAGAAGAAGAAGG+TGG | - | chr6_4:63317673-63317692 | None:intergenic | 40.0% | |
| GAGGATGAAGAAGAAGAAGA+AGG | - | chr6_4:63317676-63317695 | None:intergenic | 40.0% | |
| AGGAACGATGAGTTTCATTC+CGG | - | chr6_4:63317710-63317729 | None:intergenic | 40.0% | |
| CGTTCGAATTTATCATCTCG+TGG | + | chr6_4:63317892-63317911 | Msa0992860:CDS | 40.0% | |
| !! | GCTTGGTTTGTCTGATAACA+AGG | + | chr6_4:63318050-63318069 | Msa0992860:CDS | 40.0% |
| AGATGCGCAAGAAACTCATA+GGG | - | chr6_4:63318327-63318346 | None:intergenic | 40.0% | |
| AAGATGCGCAAGAAACTCAT+AGG | - | chr6_4:63318328-63318347 | None:intergenic | 40.0% | |
| ACAGCATGTTTATGACAGTG+TGG | + | chr6_4:63318397-63318416 | Msa0992860:intron | 40.0% | |
| ACAGCATGTTTATGACAGTG+TGG | + | chr6_4:63318397-63318416 | Msa0992860:intron | 40.0% | |
| AAACGTGCGAGAAACTCATA+GGG | - | chr6_4:63318784-63318803 | None:intergenic | 40.0% | |
| ATTGTGCACGAGAAACTCAT+AGG | + | chr6_4:63318901-63318920 | Msa0992860:intron | 40.0% | |
| TTGTGCACGAGAAACTCATA+GGG | + | chr6_4:63318902-63318921 | Msa0992860:intron | 40.0% | |
| TCGACCCCATTATGAAAATG+TGG | + | chr6_4:63319100-63319119 | Msa0992860:intron | 40.0% | |
| ! | TCTAAGGGGTTTGTTTGGAT+TGG | + | chr6_4:63319138-63319157 | Msa0992860:intron | 40.0% |
| TTGCCATGAGAAAATTGTGC+GGG | + | chr6_4:63319371-63319390 | Msa0992860:intron | 40.0% | |
| !! | CAGAAAGACTGATTTGTCGT+TGG | + | chr6_4:63319529-63319548 | Msa0992860:intron | 40.0% |
| !! | GAAATGGTTGGTGAAGAACT+TGG | + | chr6_4:63319783-63319802 | Msa0992860:CDS | 40.0% |
| AACTTGGAGGGATCAATGAT+GGG | + | chr6_4:63319799-63319818 | Msa0992860:CDS | 40.0% | |
| TGTTGTATGGGACAAAGTGT+TGG | + | chr6_4:63320016-63320035 | Msa0992860:intron | 40.0% | |
| CGAGAGTAAAATAAGCGTAG+AGG | + | chr6_4:63320056-63320075 | Msa0992860:intron | 40.0% | |
| ! | TCTACCATCTTTTCTACTGC+AGG | - | chr6_4:63320231-63320250 | None:intergenic | 40.0% |
| AGATGGTAGAAACTCTGCTT+AGG | + | chr6_4:63320241-63320260 | Msa0992860:intron | 40.0% | |
| AAACTCTGCTTAGGTGGTTT+GGG | + | chr6_4:63320250-63320269 | Msa0992860:intron | 40.0% | |
| AGTCAAATCACTAAAGGCAG+AGG | + | chr6_4:63320330-63320349 | Msa0992860:intron | 40.0% | |
| CTTATCTCACTAAGTGAGGT+CGG | - | chr6_4:63320464-63320483 | None:intergenic | 40.0% | |
| ! | AAGCCTTATCTCACTAAGTG+AGG | - | chr6_4:63320468-63320487 | None:intergenic | 40.0% |
| TCACTTAGTGAGATAAGGCT+TGG | + | chr6_4:63320467-63320486 | Msa0992860:intron | 40.0% | |
| GTGTGTAGCACAATGAGAAT+AGG | + | chr6_4:63320851-63320870 | Msa0992860:intron | 40.0% | |
| AGAGTGTAGACCACATTACT+TGG | + | chr6_4:63321065-63321084 | Msa0992860:intron | 40.0% | |
| TAGACCACATTACTTGGTCA+TGG | + | chr6_4:63321071-63321090 | Msa0992860:intron | 40.0% | |
| TTCTCCATGACCAAGTAATG+TGG | - | chr6_4:63321078-63321097 | None:intergenic | 40.0% | |
| CCAGGATTCACAACTATGTA+TGG | - | chr6_4:63321199-63321218 | None:intergenic | 40.0% | |
| CCATACATAGTTGTGAATCC+TGG | + | chr6_4:63321196-63321215 | Msa0992860:intron | 40.0% | |
| GAATCCTGGAAAATAGCGAT+TGG | + | chr6_4:63321210-63321229 | Msa0992860:intron | 40.0% | |
| !! | TCAACCAATCGCTATTTTCC+AGG | - | chr6_4:63321217-63321236 | None:intergenic | 40.0% |
| CACTATAGGCTATAGCATAG+TGG | - | chr6_4:63321244-63321263 | None:intergenic | 40.0% | |
| AACAAATCATCATTGCTCCG+CGG | - | chr6_4:63321308-63321327 | None:intergenic | 40.0% | |
| !! | GACTCGTAGAAGCACTATTA+AGG | + | chr6_4:63321804-63321823 | Msa0992860:intron | 40.0% |
| TTAGAGAAAGAGGAAGACCA+TGG | + | chr6_4:63321854-63321873 | Msa0992860:intron | 40.0% | |
| GGAAGACCATGGAAAACTAT+AGG | + | chr6_4:63321865-63321884 | Msa0992860:intron | 40.0% | |
| ! | ACACTAAAGCGCCATAATAG+TGG | - | chr6_4:63321981-63322000 | None:intergenic | 40.0% |
| ! | TGGGAAAAGGTTTTTGACAG+TGG | + | chr6_4:63322087-63322106 | Msa0992860:intron | 40.0% |
| ! | GTTGGCAGATTTTATGCATC+AGG | + | chr6_4:63322249-63322268 | Msa0992860:CDS | 40.0% |
| TTTATGCATCAGGTTATGGG+AGG | + | chr6_4:63322259-63322278 | Msa0992860:CDS | 40.0% | |
| AGAATTTGACCCGTCGAATA+TGG | + | chr6_4:63322288-63322307 | Msa0992860:CDS | 40.0% | |
| TGAGATACTATCGTTCTGCT+TGG | + | chr6_4:63322339-63322358 | Msa0992860:CDS | 40.0% | |
| GATAATAAGGTGTAGGGACA+AGG | - | chr6_4:63322384-63322403 | None:intergenic | 40.0% | |
| TCCCTACACCTTATTATCCA+GGG | + | chr6_4:63322386-63322405 | Msa0992860:CDS | 40.0% | |
| ACCCTGGATAATAAGGTGTA+GGG | - | chr6_4:63322390-63322409 | None:intergenic | 40.0% | |
| TACCCTGGATAATAAGGTGT+AGG | - | chr6_4:63322391-63322410 | None:intergenic | 40.0% | |
| GTCGATTACCCTGGATAATA+AGG | - | chr6_4:63322397-63322416 | None:intergenic | 40.0% | |
| ! | AGTGATTATGCAGCTTTGAC+AGG | + | chr6_4:63322649-63322668 | Msa0992860:intron | 40.0% |
| ! | GTGATTATGCAGCTTTGACA+GGG | + | chr6_4:63322650-63322669 | Msa0992860:intron | 40.0% |
| ACAGGTATTAAGTCTATCCC+TGG | - | chr6_4:63322690-63322709 | None:intergenic | 40.0% | |
| ! | ATTGCTGACGAAGTATTTGC+AGG | + | chr6_4:63322903-63322922 | Msa0992860:CDS | 40.0% |
| AGCCGCGTTCATATAGTATA+CGG | + | chr6_4:63322993-63323012 | Msa0992860:CDS | 40.0% | |
| ! | CAATCGAGAGGTCTTTTGAT+AGG | - | chr6_4:63323019-63323038 | None:intergenic | 40.0% |
| ! | TCGATTGCTGGATTTAGAGT+CGG | + | chr6_4:63323032-63323051 | Msa0992860:CDS | 40.0% |
| GAAGTAACTAACCTCTGTGT+TGG | - | chr6_4:63323131-63323150 | None:intergenic | 40.0% | |
| ! | CCGTCTTATTCTATTTCGGT+TGG | - | chr6_4:63323195-63323214 | None:intergenic | 40.0% |
| ! | GCACCCGTCTTATTCTATTT+CGG | - | chr6_4:63323199-63323218 | None:intergenic | 40.0% |
| AGCACACTTGATTCCTAGTT+TGG | - | chr6_4:63323246-63323265 | None:intergenic | 40.0% | |
| ATCAGACCTTATAGCGAGAA+AGG | + | chr6_4:63323311-63323330 | Msa0992860:CDS | 40.0% | |
| AGTTCTCCTTTCTCGCTATA+AGG | - | chr6_4:63323320-63323339 | None:intergenic | 40.0% | |
| !! | AGTGTGATGGTGATGATGGA+TGG | - | chr6_4:63317495-63317514 | None:intergenic | 45.0% |
| GGAGGAAGAAACAAGTGTGA+TGG | - | chr6_4:63317508-63317527 | None:intergenic | 45.0% | |
| GAAAGGAGAGGAGAAGAAGA+AGG | - | chr6_4:63317530-63317549 | None:intergenic | 45.0% | |
| GAGAAAGGAAAGGAAAGGAG+AGG | - | chr6_4:63317542-63317561 | None:intergenic | 45.0% | |
| GTGAGTGAGAGAGAAAGGAA+AGG | - | chr6_4:63317552-63317571 | None:intergenic | 45.0% | |
| GATTGGTATGGTGTGGTTGA+AGG | - | chr6_4:63317581-63317600 | None:intergenic | 45.0% | |
| !! | TCATTGACCCGGGTTTTTAG+TGG | - | chr6_4:63317603-63317622 | None:intergenic | 45.0% |
| !!! | GGGGTTGGTGGGTTTTTTTT+GGG | - | chr6_4:63317632-63317651 | None:intergenic | 45.0% |
| !!! | TGGGGTTGGTGGGTTTTTTT+TGG | - | chr6_4:63317633-63317652 | None:intergenic | 45.0% |
| !!! | TGGGTTTTTTTGGGGTTGGT+GGG | - | chr6_4:63317643-63317662 | None:intergenic | 45.0% |
| !!! | TTGGGTTTTTTTGGGGTTGG+TGG | - | chr6_4:63317644-63317663 | None:intergenic | 45.0% |
| ! | AGTTTCATTCCGGTTCGAGA+GGG | - | chr6_4:63317700-63317719 | None:intergenic | 45.0% |
| ! | AAGAAGCGTAGGAGAAGAAG+GGG | - | chr6_4:63317854-63317873 | None:intergenic | 45.0% |
| ! | GAAGAAGCGTAGGAGAAGAA+GGG | - | chr6_4:63317855-63317874 | None:intergenic | 45.0% |
| ! | AGAAGAAGCGTAGGAGAAGA+AGG | - | chr6_4:63317856-63317875 | None:intergenic | 45.0% |
| TTCGAACGAGAAGAAGAACG+AGG | - | chr6_4:63317880-63317899 | None:intergenic | 45.0% | |
| CCAAGCTGAATAATCCCATG+AGG | - | chr6_4:63318036-63318055 | None:intergenic | 45.0% | |
| CCTCATGGGATTATTCAGCT+TGG | + | chr6_4:63318033-63318052 | Msa0992860:CDS | 45.0% | |
| ! | GCCGTTCACCCTATTCATTT+TGG | - | chr6_4:63318433-63318452 | None:intergenic | 45.0% |
| AATGAATAGGGTGAACGGCA+CGG | + | chr6_4:63318434-63318453 | Msa0992860:intron | 45.0% | |
| AGATGCGCAAGAAACTCATG+TGG | - | chr6_4:63318557-63318576 | None:intergenic | 45.0% | |
| ! | GCCGTTCACCCTATTCATTT+TGG | - | chr6_4:63318433-63318452 | None:intergenic | 45.0% |
| AATGAATAGGGTGAACGGCA+CGG | + | chr6_4:63318434-63318453 | Msa0992860:intron | 45.0% | |
| GGGTGTACGAGAAACTCATA+GGG | + | chr6_4:63318686-63318705 | Msa0992860:intron | 45.0% | |
| CAAACGTGCGAGAAACTCAT+AGG | - | chr6_4:63318785-63318804 | None:intergenic | 45.0% | |
| CTATGAGTTTCTCGCACGTT+TGG | + | chr6_4:63318783-63318802 | Msa0992860:intron | 45.0% | |
| ! | GAGTGTCTAAGGGGTTTGTT+TGG | + | chr6_4:63319133-63319152 | Msa0992860:intron | 45.0% |
| ! | GATCCCGCACAATTTTCTCA+TGG | - | chr6_4:63319377-63319396 | None:intergenic | 45.0% |
| !! | ATGGTTGGTGAAGAACTTGG+AGG | + | chr6_4:63319786-63319805 | Msa0992860:CDS | 45.0% |
| !! | TGGTTGGTGAAGAACTTGGA+GGG | + | chr6_4:63319787-63319806 | Msa0992860:CDS | 45.0% |
| GAACTTGGAGGGATCAATGA+TGG | + | chr6_4:63319798-63319817 | Msa0992860:CDS | 45.0% | |
| ACTTGGAGGGATCAATGATG+GGG | + | chr6_4:63319800-63319819 | Msa0992860:CDS | 45.0% | |
| !! | GTATGGGACAAAGTGTTGGT+CGG | + | chr6_4:63320020-63320039 | Msa0992860:intron | 45.0% |
| GAGGAGATGAGATGTTGCAT+TGG | + | chr6_4:63320075-63320094 | Msa0992860:intron | 45.0% | |
| ! | GATGTTGCATTGGAGAGTGT+TGG | + | chr6_4:63320085-63320104 | Msa0992860:intron | 45.0% |
| !! | TTGCATTGGAGAGTGTTGGT+CGG | + | chr6_4:63320089-63320108 | Msa0992860:intron | 45.0% |
| AGGAGATGAGAATGTTGCGA+TGG | + | chr6_4:63320145-63320164 | Msa0992860:intron | 45.0% | |
| GATGAGAATGTTGCGATGGA+TGG | + | chr6_4:63320149-63320168 | Msa0992860:intron | 45.0% | |
| AGCACCTGCAGTAGAAAAGA+TGG | + | chr6_4:63320224-63320243 | Msa0992860:intron | 45.0% | |
| TGGTAGAAACTCTGCTTAGG+TGG | + | chr6_4:63320244-63320263 | Msa0992860:intron | 45.0% | |
| GAAACTCTGCTTAGGTGGTT+TGG | + | chr6_4:63320249-63320268 | Msa0992860:intron | 45.0% | |
| CGACCTCACTTAGTGAGATA+AGG | + | chr6_4:63320462-63320481 | Msa0992860:intron | 45.0% | |
| TAGAGGGAATGCTTGTGTTG+TGG | + | chr6_4:63320517-63320536 | Msa0992860:intron | 45.0% | |
| GGAGCAGTGTTGTCAAATAG+TGG | - | chr6_4:63321359-63321378 | None:intergenic | 45.0% | |
| GGGGTCACACAAAACAAGTT+AGG | + | chr6_4:63321686-63321705 | Msa0992860:intron | 45.0% | |
| AAACCACCCAAGACAAGACT+CGG | - | chr6_4:63321768-63321787 | None:intergenic | 45.0% | |
| !!! | TTGGGTGGTTTTGACATCTG+TGG | + | chr6_4:63321777-63321796 | Msa0992860:intron | 45.0% |
| !!! | TGGGTGGTTTTGACATCTGT+GGG | + | chr6_4:63321778-63321797 | Msa0992860:intron | 45.0% |
| GCTATAGCGCATCGAACATT+AGG | - | chr6_4:63321924-63321943 | None:intergenic | 45.0% | |
| GTCGTTTGACCCTATCTAGT+GGG | + | chr6_4:63322068-63322087 | Msa0992860:intron | 45.0% | |
| TGACCCTATCTAGTGGGAAA+AGG | + | chr6_4:63322074-63322093 | Msa0992860:intron | 45.0% | |
| ! | TGCTATGATTTTGCAGGCGT+TGG | + | chr6_4:63322231-63322250 | Msa0992860:intron | 45.0% |
| GGACAAGGAATGCATTTCCA+TGG | - | chr6_4:63322369-63322388 | None:intergenic | 45.0% | |
| GTCCCTACACCTTATTATCC+AGG | + | chr6_4:63322385-63322404 | Msa0992860:CDS | 45.0% | |
| TCAGTACTTCGACAGTGAAC+AGG | - | chr6_4:63322708-63322727 | None:intergenic | 45.0% | |
| AAACGAGGAGTCAAAGTTCG+CGG | + | chr6_4:63322780-63322799 | Msa0992860:CDS | 45.0% | |
| TCGAACCCTTCAAATCCTGT+TGG | + | chr6_4:63322813-63322832 | Msa0992860:CDS | 45.0% | |
| GGTGTCAGAATATTGCCAAC+AGG | - | chr6_4:63322831-63322850 | None:intergenic | 45.0% | |
| GGCCGTATACTATATGAACG+CGG | - | chr6_4:63322998-63323017 | None:intergenic | 45.0% | |
| TCAAAAGACCTCTCGATTGC+TGG | + | chr6_4:63323020-63323039 | Msa0992860:CDS | 45.0% | |
| CTCTAAATCCAGCAATCGAG+AGG | - | chr6_4:63323031-63323050 | None:intergenic | 45.0% | |
| CTATATCTGCACCAACACAG+AGG | + | chr6_4:63323117-63323136 | Msa0992860:CDS | 45.0% | |
| ATCAGCCCAACAGAACATAC+CGG | - | chr6_4:63323279-63323298 | None:intergenic | 45.0% | |
| TTCTGTTGGGCTGATATGAG+TGG | + | chr6_4:63323284-63323303 | Msa0992860:CDS | 45.0% | |
| !! | ACCATCCTGGTTCTATGCAA+TGG | - | chr6_4:63323403-63323422 | None:intergenic | 45.0% |
| !!! | TTTTTAATTTTTTTTTTGTT+TGG | + | chr6_4:63319705-63319724 | Msa0992860:intron | 5.0% |
| !!! | CTTAATTTTAATTATTATTA+CGG | + | chr6_4:63320971-63320990 | Msa0992860:intron | 5.0% |
| !! | TAAAAATATCTTAATTAAAA+AGG | + | chr6_4:63322513-63322532 | Msa0992860:intron | 5.0% |
| !!! | GACCCGGGTTTTTAGTGGAT+TGG | - | chr6_4:63317598-63317617 | None:intergenic | 50.0% |
| TTGGGTTTGGGTCATTGACC+CGG | - | chr6_4:63317614-63317633 | None:intergenic | 50.0% | |
| ! | GAGTTTCATTCCGGTTCGAG+AGG | - | chr6_4:63317701-63317720 | None:intergenic | 50.0% |
| CCTTGAACTACGGCTTGAAG+AGG | - | chr6_4:63317730-63317749 | None:intergenic | 50.0% | |
| CCTCTTCAAGCCGTAGTTCA+AGG | + | chr6_4:63317727-63317746 | Msa0992860:CDS | 50.0% | |
| ACCGTTGCGACCTTGAACTA+CGG | - | chr6_4:63317740-63317759 | None:intergenic | 50.0% | |
| TCTCAGGACGACGTCGTTTA+AGG | - | chr6_4:63317816-63317835 | None:intergenic | 50.0% | |
| ! | GAACGAGGAAGAAGAAGCGT+AGG | - | chr6_4:63317865-63317884 | None:intergenic | 50.0% |
| AGGGTGCACGTGAAACTCAT+AGG | + | chr6_4:63318232-63318251 | Msa0992860:intron | 50.0% | |
| GGGTGCACGTGAAACTCATA+GGG | + | chr6_4:63318233-63318252 | Msa0992860:intron | 50.0% | |
| TGCGCAAGAAACTCATAGGG+TGG | - | chr6_4:63318324-63318343 | None:intergenic | 50.0% | |
| ATGAATAGGGTGAACGGCAC+GGG | + | chr6_4:63318435-63318454 | Msa0992860:intron | 50.0% | |
| GGGTGCACGAGAAACTCATA+GGG | + | chr6_4:63318456-63318475 | Msa0992860:intron | 50.0% | |
| TGCGCAAGAAACTCATGTGG+TGG | - | chr6_4:63318554-63318573 | None:intergenic | 50.0% | |
| ATGAATAGGGTGAACGGCAC+GGG | + | chr6_4:63318435-63318454 | Msa0992860:intron | 50.0% | |
| GGGGTGTACGAGAAACTCAT+AGG | + | chr6_4:63318685-63318704 | Msa0992860:intron | 50.0% | |
| GCAGTTCACCCTATGCAGTT+CGG | - | chr6_4:63318879-63318898 | None:intergenic | 50.0% | |
| ACTAAGTGAGGTCGGCTATG+TGG | - | chr6_4:63320456-63320475 | None:intergenic | 50.0% | |
| ! | AAGATGGCCGAGTCTTGTCT+TGG | + | chr6_4:63321758-63321777 | Msa0992860:intron | 50.0% |
| ! | AGATGGCCGAGTCTTGTCTT+GGG | + | chr6_4:63321759-63321778 | Msa0992860:intron | 50.0% |
| !!! | GGGTGGTTTTGACATCTGTG+GGG | + | chr6_4:63321779-63321798 | Msa0992860:intron | 50.0% |
| CGTCGTTTGACCCTATCTAG+TGG | + | chr6_4:63322067-63322086 | Msa0992860:intron | 50.0% | |
| GCTTTGACAGGGACGTAAGA+TGG | + | chr6_4:63322661-63322680 | Msa0992860:intron | 50.0% | |
| GTATTTGCAGGCTCCACGTA+CGG | + | chr6_4:63322915-63322934 | Msa0992860:CDS | 50.0% | |
| AAGTGTGCTAAGAGTAGCGC+CGG | + | chr6_4:63323257-63323276 | Msa0992860:CDS | 50.0% | |
| !! | TAGCGCCGGTATGTTCTGTT+GGG | + | chr6_4:63323271-63323290 | Msa0992860:CDS | 50.0% |
| GCTTGCCATTGCATAGAACC+AGG | + | chr6_4:63323395-63323414 | Msa0992860:CDS | 50.0% | |
| GCCATTGCATAGAACCAGGA+TGG | + | chr6_4:63323399-63323418 | Msa0992860:CDS | 50.0% | |
| GGAGAGGAGAAGAAGAAGGG+AGG | - | chr6_4:63317526-63317545 | None:intergenic | 55.0% | |
| TGGGTTTGGGTCATTGACCC+GGG | - | chr6_4:63317613-63317632 | None:intergenic | 55.0% | |
| TCATCCTCTCCCTCTCGAAC+CGG | + | chr6_4:63317688-63317707 | Msa0992860:CDS | 55.0% | |
| GCCGTAGTTCAAGGTCGCAA+CGG | + | chr6_4:63317736-63317755 | Msa0992860:CDS | 55.0% | |
| ! | GGTCGCAACGGTTTTCTCCT+CGG | + | chr6_4:63317748-63317767 | Msa0992860:CDS | 55.0% |
| CACGTGCACCCTATGCAGTT+CGG | - | chr6_4:63318224-63318243 | None:intergenic | 55.0% | |
| TGAATAGGGTGAACGGCACG+GGG | + | chr6_4:63318436-63318455 | Msa0992860:intron | 55.0% | |
| GGGGTGCACGAGAAACTCAT+AGG | + | chr6_4:63318455-63318474 | Msa0992860:intron | 55.0% | |
| TGAATAGGGTGAACGGCACG+GGG | + | chr6_4:63318436-63318455 | Msa0992860:intron | 55.0% | |
| CGTGCGAGAAACTCATAGGG+TGG | - | chr6_4:63318781-63318800 | None:intergenic | 55.0% | |
| TCGTTCTGCTTGGCAGACCA+TGG | + | chr6_4:63322349-63322368 | Msa0992860:CDS | 55.0% | |
| !! | GAAAGTGCCGTCGATTACCC+TGG | - | chr6_4:63322406-63322425 | None:intergenic | 55.0% |
| AAACTCCTCGCTTCCGTACG+TGG | - | chr6_4:63322931-63322950 | None:intergenic | 55.0% | |
| ACGGGTGCACGATGAGTTTG+TGG | + | chr6_4:63323211-63323230 | Msa0992860:CDS | 55.0% | |
| !! | GTAGCGCCGGTATGTTCTGT+TGG | + | chr6_4:63323270-63323289 | Msa0992860:CDS | 55.0% |
| ATGCAATGGCAAGCCGATCC+AGG | - | chr6_4:63323389-63323408 | None:intergenic | 55.0% | |
| ! | CATTCCGGTTCGAGAGGGAG+AGG | - | chr6_4:63317695-63317714 | None:intergenic | 60.0% |
| ! | TGGCCGAGTCTTGTCTTGGG+TGG | + | chr6_4:63321762-63321781 | Msa0992860:intron | 60.0% |
| AGGGACGTAAGATGGCGTCC+AGG | + | chr6_4:63322669-63322688 | Msa0992860:intron | 60.0% | |
| GGGACGTAAGATGGCGTCCA+GGG | + | chr6_4:63322670-63322689 | Msa0992860:intron | 60.0% | |
| AGGCTCCACGTACGGAAGCG+AGG | + | chr6_4:63322923-63322942 | Msa0992860:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 63317462 | 63323517 | 63317462 | ID=Msa0992860;Name=Msa0992860 |
| chr6_4 | mRNA | 63317462 | 63323517 | 63317462 | ID=Msa0992860-mRNA-1;Parent=Msa0992860;Name=Msa0992860-mRNA-1;_AED=0.03;_eAED=0.03;_QI=157|0.66|0.75|1|1|1|4|0|531 |
| chr6_4 | exon | 63317462 | 63318071 | 63317462 | ID=Msa0992860-mRNA-1:exon:12065;Parent=Msa0992860-mRNA-1 |
| chr6_4 | exon | 63319763 | 63319897 | 63319763 | ID=Msa0992860-mRNA-1:exon:12066;Parent=Msa0992860-mRNA-1 |
| chr6_4 | exon | 63322247 | 63322407 | 63322247 | ID=Msa0992860-mRNA-1:exon:12067;Parent=Msa0992860-mRNA-1 |
| chr6_4 | exon | 63322671 | 63323517 | 63322671 | ID=Msa0992860-mRNA-1:exon:12068;Parent=Msa0992860-mRNA-1 |
| chr6_4 | five_prime_UTR | 63317462 | 63317618 | 63317462 | ID=Msa0992860-mRNA-1:five_prime_utr;Parent=Msa0992860-mRNA-1 |
| chr6_4 | CDS | 63317619 | 63318071 | 63317619 | ID=Msa0992860-mRNA-1:cds;Parent=Msa0992860-mRNA-1 |
| chr6_4 | CDS | 63319763 | 63319897 | 63319763 | ID=Msa0992860-mRNA-1:cds;Parent=Msa0992860-mRNA-1 |
| chr6_4 | CDS | 63322247 | 63322407 | 63322247 | ID=Msa0992860-mRNA-1:cds;Parent=Msa0992860-mRNA-1 |
| chr6_4 | CDS | 63322671 | 63323517 | 63322671 | ID=Msa0992860-mRNA-1:cds;Parent=Msa0992860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
