AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0039780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0039780 MtrunA17_Chr1g0204131 98.248 628 11 0 1 628 1 628 0.0 1269
Msa0039780 MtrunA17_Chr8g0391241 58.304 578 217 7 74 628 6 582 0.0 668
Msa0039780 MtrunA17_Chr1g0204151 94.872 117 6 0 456 572 20 136 9.45e-75 236
Msa0039780 MtrunA17_Chr1g0204161 95.745 47 2 0 582 628 13 59 4.33e-24 95.5
Msa0039780 MtrunA17_Chr4g0067871 55.072 69 31 0 560 628 5 73 8.97e-18 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0039780 AT5G51820.1 84.590 597 89 1 35 628 27 623 0.0 1042
Msa0039780 AT1G70730.3 58.864 581 214 6 73 628 82 662 0.0 688
Msa0039780 AT1G70730.1 58.864 581 214 6 73 628 5 585 0.0 687
Msa0039780 AT1G70730.2 58.793 580 214 6 74 628 26 605 0.0 686
Msa0039780 AT1G23190.1 60.000 580 208 7 73 628 4 583 0.0 685

Find 153 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATACCTTTGGAAGATTT+TGG 0.116294 1_1:+69744883 Msa0039780:CDS
TAGATACTCTATCATCTTAT+TGG 0.171603 1_1:-69746451 None:intergenic
ATATTTAGCTTCTCTGTAAA+AGG 0.251377 1_1:+69747406 Msa0039780:three_prime_UTR
ATTCAGGACCACCGGGATTA+TGG 0.258958 1_1:-69742163 None:intergenic
TTAACACTGTTCTTGAAGTA+TGG 0.261178 1_1:-69745447 None:intergenic
AAGAAAATTACCTTGCAAAT+TGG 0.263297 1_1:+69741452 Msa0039780:CDS
TGAATATGATTGGGGTATTA+AGG 0.269904 1_1:+69742181 Msa0039780:CDS
TGCTGAACCTCATGGCATTA+AGG 0.270429 1_1:+69741164 Msa0039780:CDS
TTCTGATTATCTGGAGCTAT+TGG 0.281712 1_1:+69744363 Msa0039780:CDS
AGATCCAGTTTCTGATTATC+TGG 0.283606 1_1:+69744354 Msa0039780:CDS
AACATTATGTATGCTGAAAA+TGG 0.287707 1_1:+69745032 Msa0039780:CDS
ATTGCCTTGAAACCGTTAAT+AGG 0.291661 1_1:+69747006 Msa0039780:CDS
TTACCTTGCAAATTGGATTC+AGG 0.292125 1_1:+69741459 Msa0039780:CDS
ATTTGCGGGGAAGAGAGTTT+TGG 0.344745 1_1:+69745788 Msa0039780:CDS
AATGTTGGGGTTACAAAATT+CGG 0.349561 1_1:+69744310 Msa0039780:CDS
TGAAGGAAGAAGAAGGAGAT+TGG 0.361877 1_1:-69741062 None:intergenic
TCCATCACTGACAAGATTTA+CGG 0.365080 1_1:+69742640 Msa0039780:CDS
GATGCCATGCATGCAGTTGC+TGG 0.369833 1_1:+69744707 Msa0039780:CDS
CTGGGAATTTGTCAATTTGC+GGG 0.370284 1_1:+69745774 Msa0039780:CDS
GCTGAAAATGGACCTGATTT+CGG 0.370762 1_1:+69745044 Msa0039780:CDS
TTAGTTTGTGTCTGTGTGAT+AGG 0.374817 1_1:-69740862 None:intergenic
GTTGAACCTCCCTTTCTTTG+AGG 0.375439 1_1:+69745603 Msa0039780:CDS
TTAATACCCCAATCATATTC+AGG 0.378949 1_1:-69742179 None:intergenic
ATCTTGTCAGTGATGGATTC+TGG 0.380574 1_1:-69742634 None:intergenic
AATTTAAATATGCAGGTAGA+TGG 0.382586 1_1:+69746737 Msa0039780:intron
AATTTCAAATGGAATACCTT+TGG 0.393380 1_1:+69744873 Msa0039780:CDS
ATCAAAATTGCTGCTGGAAA+TGG 0.394303 1_1:+69741771 Msa0039780:CDS
AGCTCCAGATAATCAGAAAC+TGG 0.395255 1_1:-69744358 None:intergenic
ACGTTGACTTATCAAATGTT+GGG 0.396686 1_1:+69744296 Msa0039780:CDS
GAATTAAAGCGGACTCTTAA+CGG 0.399265 1_1:-69741099 None:intergenic
TATTAATCTCACGTTAGATT+AGG 0.401560 1_1:-69744922 None:intergenic
GGGTGGACTATGCTCCAAAA+TGG 0.402584 1_1:-69747301 None:intergenic
TTTGGGAATCTTATGGATGC+TGG 0.406165 1_1:+69745755 Msa0039780:CDS
CGGTGGTCCTGAATATGATT+GGG 0.412166 1_1:+69742172 Msa0039780:CDS
TTCGTGAGAAAGACGGAATC+TGG 0.414017 1_1:+69745828 Msa0039780:CDS
TCACTAGCAGCTCCGAAATC+AGG 0.414368 1_1:-69745056 None:intergenic
ATGTAAAATCATCTGCAAAC+TGG 0.416056 1_1:-69746616 None:intergenic
AGTGAGACATTGGAGGTTTG+AGG 0.418570 1_1:-69741015 None:intergenic
AGAAGATTGTACCTAAAATC+TGG 0.421191 1_1:-69744541 None:intergenic
ATGTAGGATTCAATTTCAAA+TGG 0.426656 1_1:+69744862 Msa0039780:intron
CCCATCTTTGTGGATAAACT+TGG 0.430041 1_1:+69744743 Msa0039780:CDS
CGCAACAAAGACACGAAACC+AGG 0.430719 1_1:+69746166 Msa0039780:CDS
AGCAAGCCCGGTGATAAGTA+TGG 0.431470 1_1:+69746492 Msa0039780:CDS
ACAAAATATACCTCAAAGAA+AGG 0.431933 1_1:-69745613 None:intergenic
ACTTGATCTCAGGTAATGAT+AGG 0.432412 1_1:-69747245 None:intergenic
TATCATCTTATTGGCCCCTT+CGG 0.437478 1_1:-69746442 None:intergenic
TGAAGTTTGAAGGAAGAAGA+AGG 0.448640 1_1:-69741069 None:intergenic
TTGAGGTTTGAGCGCAGAAA+TGG 0.450845 1_1:-69740998 None:intergenic
TCATTACCTGAGATCAAGTT+CGG 0.451519 1_1:+69747249 Msa0039780:three_prime_UTR
GACGTTGACTTATCAAATGT+TGG 0.453030 1_1:+69744295 Msa0039780:CDS
CCGGTGGTCCTGAATATGAT+TGG 0.455443 1_1:+69742171 Msa0039780:CDS
TGATGTTGTAAAGGAACATT+GGG 0.455481 1_1:+69746210 Msa0039780:CDS
ATAATAATCAAAATTGCTGC+TGG 0.456040 1_1:+69741765 Msa0039780:CDS
TTGAATTGAAAGTGAGACAT+TGG 0.456324 1_1:-69741025 None:intergenic
ATAACCTATTAACGGTTTCA+AGG 0.456835 1_1:-69747010 None:intergenic
ATACTTCAAGAACAGTGTTA+AGG 0.459497 1_1:+69745449 Msa0039780:CDS
TGATTATCTGGAGCTATTGG+AGG 0.462457 1_1:+69744366 Msa0039780:CDS
TTACAGGGAACAGGTTCTGC+TGG 0.464686 1_1:+69746916 Msa0039780:intron
TGTCCTTCAATGGGTTTGGT+AGG 0.464950 1_1:-69741267 None:intergenic
ACAGAGATCAATTTCTCCCC+TGG 0.468883 1_1:-69746184 None:intergenic
GCTGGGAATTTGTCAATTTG+CGG 0.469092 1_1:+69745773 Msa0039780:CDS
ATTCCTACCAAACCCATTGA+AGG 0.469265 1_1:+69741264 Msa0039780:CDS
TCCGTAAATCTTGTCAGTGA+TGG 0.471433 1_1:-69742641 None:intergenic
TTGGGAATCTTATGGATGCT+GGG 0.472034 1_1:+69745756 Msa0039780:CDS
TGAGGTTCAGCAATGGTTGT+AGG 0.478449 1_1:-69741153 None:intergenic
CTCTGTATCTGATGTTGTAA+AGG 0.480141 1_1:+69746201 Msa0039780:CDS
AGGTCGTGTTTAGAAACATC+TGG 0.480847 1_1:-69746973 None:intergenic
CGTGTGCTTAAACCGATCAA+TGG 0.481255 1_1:+69740948 Msa0039780:exon
CCAAGTTTATCCACAAAGAT+GGG 0.482008 1_1:-69744743 None:intergenic
ACCAAGTTTATCCACAAAGA+TGG 0.484051 1_1:-69744744 None:intergenic
CAGCCGTTTCTGCTGTGATA+AGG 0.485131 1_1:+69742018 Msa0039780:CDS
TAATCAAAGGTCTTATTTCA+CGG 0.486109 1_1:+69744518 Msa0039780:CDS
AGAAAAGAAATTTCTACCAT+AGG 0.488825 1_1:-69746236 None:intergenic
TCAGTGATGGATTCTGGTGC+AGG 0.492871 1_1:-69742628 None:intergenic
CTTTAATAGAGAAGCTGCAC+AGG 0.498615 1_1:+69741636 Msa0039780:CDS
TTACTAGGGCTGTATTAGCT+TGG 0.499141 1_1:+69746125 Msa0039780:intron
TAGGCGTAATGCACTCAACT+TGG 0.502028 1_1:-69747221 None:intergenic
CTGATGTTGTAAAGGAACAT+TGG 0.505332 1_1:+69746209 Msa0039780:CDS
GGAGATTGGAGAGTGAAGGA+AGG 0.505584 1_1:-69741048 None:intergenic
CTCTGATGATTGAATTAAAG+CGG 0.509963 1_1:-69741110 None:intergenic
TCTCACGTTAGATTAGGATC+AGG 0.510026 1_1:-69744916 None:intergenic
GAACTCTTTGAGCTTTGAAA+CGG 0.513418 1_1:-69747127 None:intergenic
AGAAGGAGATTGGAGAGTGA+AGG 0.513473 1_1:-69741052 None:intergenic
TCAAAGCTCAAAGAGTTCAC+AGG 0.520238 1_1:+69747132 Msa0039780:CDS
ACATTTGATAAGTCAACGTC+AGG 0.520308 1_1:-69744292 None:intergenic
AGCACCAGCAACTGCATGCA+TGG 0.520589 1_1:-69744711 None:intergenic
GACAAACCGAACTTGATCTC+AGG 0.527283 1_1:-69747255 None:intergenic
TGGTATCAAAACAAGGGGTC+CGG 0.530761 1_1:+69746765 Msa0039780:CDS
TATAGGAATGTGAATCCGAA+GGG 0.532495 1_1:+69746427 Msa0039780:intron
CAAAATATACCTCAAAGAAA+GGG 0.540251 1_1:-69745612 None:intergenic
AAGGAACATTGGGCAACCTA+TGG 0.541470 1_1:+69746220 Msa0039780:CDS
TGCTGTGATAAGGAAGAGGC+AGG 0.541503 1_1:+69742028 Msa0039780:CDS
CTTCCTTATCACAGCAGAAA+CGG 0.542446 1_1:-69742021 None:intergenic
TATAGGGACACTTACAGATA+GGG 0.543532 1_1:-69742668 None:intergenic
TAACTTACCATACTTATCAC+CGG 0.545382 1_1:-69746499 None:intergenic
AATTGAAAGTGAGACATTGG+AGG 0.547388 1_1:-69741022 None:intergenic
ATTGCTGCTGGAAATGGTGT+TGG 0.550223 1_1:+69741777 Msa0039780:CDS
ATCCAGTTTAATTACAGTAG+TGG 0.550227 1_1:+69742601 Msa0039780:intron
CGTTGACTTATCAAATGTTG+GGG 0.551945 1_1:+69744297 Msa0039780:CDS
CTTATCACAGCAGAAACGGC+TGG 0.555218 1_1:-69742017 None:intergenic
CTTAAACTTCAACAGGCGAA+TGG 0.562488 1_1:+69742119 Msa0039780:intron
TGTGTCTGTGTGATAGGAGT+AGG 0.562847 1_1:-69740856 None:intergenic
TGTCTGTGTAAGAGCAAGCC+CGG 0.563841 1_1:+69746480 Msa0039780:CDS
TTCCGTCTTTCTCACGAATG+TGG 0.567205 1_1:-69745823 None:intergenic
TTTATTGAACAGATATGCAA+AGG 0.567419 1_1:+69745001 Msa0039780:intron
GTGTTGGTGTTAGGAGGTGA+TGG 0.568014 1_1:+69741607 Msa0039780:CDS
GGATAAACTTGGTGCTACTC+CGG 0.568376 1_1:+69744754 Msa0039780:CDS
CCTTGGATGCAGGTGCCCAC+TGG 0.570875 1_1:+69745722 Msa0039780:intron
GTTTAATTCATTGCCGCCAG+AGG 0.572278 1_1:+69741570 Msa0039780:CDS
CAAAGCTCAAAGAGTTCACA+GGG 0.577713 1_1:+69747133 Msa0039780:CDS
TCAAGGCAATTTGAGCGTCA+AGG 0.579209 1_1:-69746993 None:intergenic
AAACCTGAATCCAATTTGCA+AGG 0.579422 1_1:-69741462 None:intergenic
TGTGACAGAAAGCCATTGAT+CGG 0.580085 1_1:-69740960 None:intergenic
ACAACCATTGCTGAACCTCA+TGG 0.580101 1_1:+69741156 Msa0039780:CDS
AACTTACCATACTTATCACC+GGG 0.580691 1_1:-69746498 None:intergenic
AATGGAGTGTTGGTGTTAGG+AGG 0.581232 1_1:+69741601 Msa0039780:CDS
GCAACAAAGACACGAAACCA+GGG 0.582127 1_1:+69746167 Msa0039780:CDS
AGCAATGGTTGTAGGAGAAG+AGG 0.585318 1_1:-69741145 None:intergenic
GTCTGTGTGATAGGAGTAGG+AGG 0.590748 1_1:-69740853 None:intergenic
CAATCATATTCAGGACCACC+GGG 0.600642 1_1:-69742170 None:intergenic
TTTCTGCTGTGATAAGGAAG+AGG 0.600742 1_1:+69742024 Msa0039780:CDS
ATATAGGAATGTGAATCCGA+AGG 0.600836 1_1:+69746426 Msa0039780:intron
CAACAAAGACACGAAACCAG+GGG 0.600910 1_1:+69746168 Msa0039780:CDS
AAACTTCAACAGGCGAATGG+TGG 0.601613 1_1:+69742122 Msa0039780:intron
CCAATCATATTCAGGACCAC+CGG 0.606027 1_1:-69742171 None:intergenic
GATTTCGGAGCTGCTAGTGA+TGG 0.607375 1_1:+69745059 Msa0039780:CDS
GGATGCAGGTGCCCACTGGT+TGG 0.610506 1_1:+69745726 Msa0039780:intron
ATCTCAGGTAATGATAGGAT+AGG 0.613607 1_1:-69747240 None:intergenic
GGAAGTGTGGTATCAAAACA+AGG 0.613768 1_1:+69746758 Msa0039780:CDS
CTGGTTTCGTGTCTTTGTTG+CGG 0.618637 1_1:-69746165 None:intergenic
CAAGTTTATCCACAAAGATG+GGG 0.618671 1_1:-69744742 None:intergenic
TAAAATCATCTGCAAACTGG+AGG 0.620007 1_1:-69746613 None:intergenic
ATGAGTGCAAGCCATAATCC+CGG 0.620791 1_1:+69742152 Msa0039780:CDS
CCATGTCCAAAATCTTCCAA+AGG 0.626695 1_1:-69744889 None:intergenic
TATGCAGGTAGATGGAAGTG+TGG 0.631620 1_1:+69746745 Msa0039780:intron
AAGTTTATCCACAAAGATGG+GGG 0.633720 1_1:-69744741 None:intergenic
GGTGGTCCTGAATATGATTG+GGG 0.636303 1_1:+69742173 Msa0039780:CDS
GACCACATTCGTGAGAAAGA+CGG 0.637403 1_1:+69745821 Msa0039780:CDS
AATATACCTCAAAGAAAGGG+AGG 0.641483 1_1:-69745609 None:intergenic
GCACGATCAATGCCGACGAG+TGG 0.650359 1_1:+69745556 Msa0039780:CDS
CTATCTAGAGCACCACTCGT+CGG 0.651595 1_1:-69745568 None:intergenic
TTATTTATTTAGTTACACAA+TGG 0.658888 1_1:-69747368 None:intergenic
ATAACCGCTACAGAGTCTGA+AGG 0.662514 1_1:-69745399 None:intergenic
TGGGAATTTGTCAATTTGCG+GGG 0.668271 1_1:+69745775 Msa0039780:CDS
AAAATTCGGAAGCTTCAGTG+TGG 0.670150 1_1:+69744324 Msa0039780:CDS
AAGTGTGGTATCAAAACAAG+GGG 0.673050 1_1:+69746760 Msa0039780:CDS
AACTCCTTCAGACTCTGTAG+CGG 0.682045 1_1:+69745395 Msa0039780:CDS
AATGCCATGAGGTTCAGCAA+TGG 0.683158 1_1:-69741160 None:intergenic
GAAGTGTGGTATCAAAACAA+GGG 0.690476 1_1:+69746759 Msa0039780:CDS
GAAAGAACCTTAATGCCATG+AGG 0.691242 1_1:-69741171 None:intergenic
AGAAAGTGTTGATCATTACA+CGG 0.697728 1_1:+69740911 Msa0039780:five_prime_UTR
ATAGGAATGTGAATCCGAAG+GGG 0.711243 1_1:+69746428 Msa0039780:intron
AGTGCAAGCCATAATCCCGG+TGG 0.744470 1_1:+69742155 Msa0039780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTAAAATTTGATTTCTA+TGG - chr1_1:69741683-69741702 None:intergenic 10.0%
!!! TTTTGAAATTAATAAAACTA+AGG - chr1_1:69743476-69743495 None:intergenic 10.0%
!!! AGTTTTATTAATTTCAAAAT+TGG + chr1_1:69743477-69743496 Msa0039780:intron 10.0%
!!! GTTTTATTAATTTCAAAATT+GGG + chr1_1:69743478-69743497 Msa0039780:intron 10.0%
!!! TTTATATGTATAATACTTTT+TGG + chr1_1:69746300-69746319 Msa0039780:intron 10.0%
!!! TTTTTGACAAATTTAAATAT+AGG + chr1_1:69746410-69746429 Msa0039780:intron 10.0%
!!! TATAATTTTTTTGAAAGAAA+TGG - chr1_1:69746857-69746876 None:intergenic 10.0%
!!! TAAATATCATATTTTACATA+GGG - chr1_1:69747324-69747343 None:intergenic 10.0%
!!! ATAAATATCATATTTTACAT+AGG - chr1_1:69747325-69747344 None:intergenic 10.0%
!! TTAAACTTATGTGAATTTAT+AGG + chr1_1:69741543-69741562 Msa0039780:intron 15.0%
!!! TACTTTTTAATTTCTAATAC+AGG + chr1_1:69741976-69741995 Msa0039780:intron 15.0%
!!! ACTTTTTAATTTCTAATACA+GGG + chr1_1:69741977-69741996 Msa0039780:intron 15.0%
!! TTAAGGAATACTTAAATATA+GGG - chr1_1:69742687-69742706 None:intergenic 15.0%
!! ATTAAGGAATACTTAAATAT+AGG - chr1_1:69742688-69742707 None:intergenic 15.0%
!! TAGTAGAATTAATTTCATAA+GGG + chr1_1:69742829-69742848 Msa0039780:intron 15.0%
!! TTATTAATATTTCTTTCATG+AGG - chr1_1:69744045-69744064 None:intergenic 15.0%
!! AGTTTATACATACTATTAAT+AGG + chr1_1:69745477-69745496 Msa0039780:intron 15.0%
!!! TAATATTTTAGATGAAGTAA+TGG + chr1_1:69745677-69745696 Msa0039780:intron 15.0%
!!! AACATTTGCTATTAAAAAAA+AGG - chr1_1:69745908-69745927 None:intergenic 15.0%
!! ATTATGATTTATATATCACT+CGG + chr1_1:69745970-69745989 Msa0039780:intron 15.0%
!! TTATTTATTTAGTTACACAA+TGG - chr1_1:69747371-69747390 None:intergenic 15.0%
!! AATCTTCAAGAAAAAAGAAA+GGG - chr1_1:69741238-69741257 None:intergenic 20.0%
!! TAATCTTCAAGAAAAAAGAA+AGG - chr1_1:69741239-69741258 None:intergenic 20.0%
!!! ACTATATTTGTTTGTTTTGT+AGG + chr1_1:69741414-69741433 Msa0039780:intron 20.0%
!! AATACTATGATAAGGAAAAA+AGG - chr1_1:69742069-69742088 None:intergenic 20.0%
!! ATATGAGAAGAAAGTAAATA+AGG - chr1_1:69742796-69742815 None:intergenic 20.0%
!! GTAGTAGAATTAATTTCATA+AGG + chr1_1:69742828-69742847 Msa0039780:intron 20.0%
!! TTTCTATTAGTAGATATTCA+AGG - chr1_1:69742870-69742889 None:intergenic 20.0%
!! GAATATCTACTAATAGAAAA+TGG + chr1_1:69742871-69742890 Msa0039780:intron 20.0%
!! TAAACTTTATGCTATCTTAA+TGG - chr1_1:69742907-69742926 None:intergenic 20.0%
!!! TTATTACAAAAAGTACAAGT+TGG - chr1_1:69742944-69742963 None:intergenic 20.0%
!!! ATTACCATGAAACAATTTTA+GGG - chr1_1:69743077-69743096 None:intergenic 20.0%
!!! GAGATTTTGCAAAAATTTAA+AGG - chr1_1:69743185-69743204 None:intergenic 20.0%
!! GATATTACAGAACATAATTA+AGG + chr1_1:69743336-69743355 Msa0039780:intron 20.0%
!! ATAAATTATTTCATCACAAG+AGG + chr1_1:69743653-69743672 Msa0039780:intron 20.0%
!! TATAATAACAATAAGCAATG+TGG - chr1_1:69743845-69743864 None:intergenic 20.0%
!!! ACATTGCTTATTGTTATTAT+AGG + chr1_1:69743844-69743863 Msa0039780:intron 20.0%
!!! CTAAGTGTTATTTTTATCAA+AGG - chr1_1:69743956-69743975 None:intergenic 20.0%
!!! TATTGCAAATTTTGACTTTA+CGG + chr1_1:69744575-69744594 Msa0039780:intron 20.0%
!! CAAATACATAAAAATCATCA+AGG - chr1_1:69745319-69745338 None:intergenic 20.0%
!!! CTTCATCTAAAATATTAAGA+GGG - chr1_1:69745674-69745693 None:intergenic 20.0%
!!! ACTTCATCTAAAATATTAAG+AGG - chr1_1:69745675-69745694 None:intergenic 20.0%
!!! GCTATTAAAAAAAAGGTATA+CGG - chr1_1:69745901-69745920 None:intergenic 20.0%
!!! TATTTAGTTTAGTTTTGCTT+TGG + chr1_1:69746331-69746350 Msa0039780:intron 20.0%
!!! ATATTTTTCTTTTCAACTCA+AGG + chr1_1:69746686-69746705 Msa0039780:intron 20.0%
!!! CTGATTTAATTTAAATATGC+AGG + chr1_1:69746730-69746749 Msa0039780:intron 20.0%
!! TATATTACTATACGTTATCT+TGG - chr1_1:69747046-69747065 None:intergenic 20.0%
! TTCACCATTATATTAGTGAT+GGG + chr1_1:69741364-69741383 Msa0039780:intron 25.0%
! AAGAAAATTACCTTGCAAAT+TGG + chr1_1:69741452-69741471 Msa0039780:CDS 25.0%
! ATAATAATCAAAATTGCTGC+TGG + chr1_1:69741765-69741784 Msa0039780:CDS 25.0%
! CTTGTTAATTGTTACAAGAA+AGG + chr1_1:69741844-69741863 Msa0039780:intron 25.0%
! TAATTGTTACAAGAAAGGAT+AGG + chr1_1:69741849-69741868 Msa0039780:intron 25.0%
!! TTTAATTTCTAATACAGGGA+AGG + chr1_1:69741981-69742000 Msa0039780:intron 25.0%
! TTAATTTCTAATACAGGGAA+GGG + chr1_1:69741982-69742001 Msa0039780:intron 25.0%
! TTGCTGAAAATACTATGATA+AGG - chr1_1:69742077-69742096 None:intergenic 25.0%
!! TCATTTTCTTAAACTTCAAC+AGG + chr1_1:69742112-69742131 Msa0039780:intron 25.0%
!! ATTAGTTCTCATCCATTTAA+AGG + chr1_1:69742215-69742234 Msa0039780:intron 25.0%
! TCGGTATTTATTATGCATAT+GGG - chr1_1:69742468-69742487 None:intergenic 25.0%
! ATCGGTATTTATTATGCATA+TGG - chr1_1:69742469-69742488 None:intergenic 25.0%
!! AAAGCTATGTATTGACAAAT+CGG - chr1_1:69742487-69742506 None:intergenic 25.0%
! TTAGTAGATATTCAAGGAAA+TGG - chr1_1:69742864-69742883 None:intergenic 25.0%
!! CATTACCATGAAACAATTTT+AGG - chr1_1:69743078-69743097 None:intergenic 25.0%
! AAATGACAAATCATCATAAG+TGG - chr1_1:69743133-69743152 None:intergenic 25.0%
!! TTTTGCAAAAATTTAAAGGC+AGG - chr1_1:69743181-69743200 None:intergenic 25.0%
! TTAATTTCAAAATTGGGTCT+AGG + chr1_1:69743484-69743503 Msa0039780:intron 25.0%
! ATTTATCGATATTGAAAAGC+TGG + chr1_1:69743587-69743606 Msa0039780:intron 25.0%
! CTAATAAAACATTTCCATTC+AGG + chr1_1:69743704-69743723 Msa0039780:intron 25.0%
! TTTCAACATAATCAGATGAT+CGG - chr1_1:69743741-69743760 None:intergenic 25.0%
!!! ATCATGTTTTAAAACTTGGT+AGG - chr1_1:69743804-69743823 None:intergenic 25.0%
!!! ACGAATCATGTTTTAAAACT+TGG - chr1_1:69743808-69743827 None:intergenic 25.0%
!!! AGGTTTTTTCATTCAACATA+TGG - chr1_1:69744025-69744044 None:intergenic 25.0%
! TTAATTGTCCAAAAAAAACC+AGG - chr1_1:69744147-69744166 None:intergenic 25.0%
! TTATTTGTCAAAGAAACTGT+AGG - chr1_1:69744176-69744195 None:intergenic 25.0%
! TACAGTTTCTTTGACAAATA+AGG + chr1_1:69744175-69744194 Msa0039780:intron 25.0%
! CAATAACAAATAAACTGAAC+TGG - chr1_1:69744467-69744486 None:intergenic 25.0%
!!! TTTGATTTTCAGCTAATCAA+AGG + chr1_1:69744505-69744524 Msa0039780:CDS 25.0%
!!! TAATCAAAGGTCTTATTTCA+CGG + chr1_1:69744518-69744537 Msa0039780:CDS 25.0%
!!! ATTGCAAATTTTGACTTTAC+GGG + chr1_1:69744576-69744595 Msa0039780:intron 25.0%
! ATGTAGGATTCAATTTCAAA+TGG + chr1_1:69744862-69744881 Msa0039780:intron 25.0%
! AATTTCAAATGGAATACCTT+TGG + chr1_1:69744873-69744892 Msa0039780:CDS 25.0%
! TATTAATCTCACGTTAGATT+AGG - chr1_1:69744925-69744944 None:intergenic 25.0%
! TTTATTGAACAGATATGCAA+AGG + chr1_1:69745001-69745020 Msa0039780:intron 25.0%
! AACATTATGTATGCTGAAAA+TGG + chr1_1:69745032-69745051 Msa0039780:CDS 25.0%
!!! CAACTACATCTTCTAAAATA+TGG - chr1_1:69745254-69745273 None:intergenic 25.0%
!! ATGTATTTGAACTTTTGTTC+AGG + chr1_1:69745330-69745349 Msa0039780:intron 25.0%
! CAAAATATACCTCAAAGAAA+GGG - chr1_1:69745615-69745634 None:intergenic 25.0%
! ACAAAATATACCTCAAAGAA+AGG - chr1_1:69745616-69745635 None:intergenic 25.0%
!!! GAAATTTTTTGGGAATCTTA+TGG + chr1_1:69745748-69745767 Msa0039780:CDS 25.0%
! TACAACTACTAGTTATGTTA+CGG + chr1_1:69745930-69745949 Msa0039780:intron 25.0%
! TTGTTTGTTTCCAATTACTA+GGG + chr1_1:69746111-69746130 Msa0039780:intron 25.0%
! AGAAAAGAAATTTCTACCAT+AGG - chr1_1:69746239-69746258 None:intergenic 25.0%
! ATTTCTTAATACCATAAGCT+AGG + chr1_1:69746355-69746374 Msa0039780:intron 25.0%
! TAGATACTCTATCATCTTAT+TGG - chr1_1:69746454-69746473 None:intergenic 25.0%
! AAGAAAAATATGAACGTGAT+AGG - chr1_1:69746677-69746696 None:intergenic 25.0%
! AATTTAAATATGCAGGTAGA+TGG + chr1_1:69746737-69746756 Msa0039780:intron 25.0%
! CACGAAAAATAACCTATTAA+CGG - chr1_1:69747021-69747040 None:intergenic 25.0%
!!! TTTTGGTTGTTTTACCATTT+TGG + chr1_1:69747287-69747306 Msa0039780:three_prime_UTR 25.0%
!! ATATCATATTTTACATAGGG+TGG - chr1_1:69747321-69747340 None:intergenic 25.0%
!! ATATTTAGCTTCTCTGTAAA+AGG + chr1_1:69747406-69747425 Msa0039780:three_prime_UTR 25.0%
!! AGAAAGTGTTGATCATTACA+CGG + chr1_1:69740911-69740930 Msa0039780:five_prime_UTR 30.0%
TTGAATTGAAAGTGAGACAT+TGG - chr1_1:69741028-69741047 None:intergenic 30.0%
CTCTGATGATTGAATTAAAG+CGG - chr1_1:69741113-69741132 None:intergenic 30.0%
GTTCACCATTATATTAGTGA+TGG + chr1_1:69741363-69741382 Msa0039780:intron 30.0%
ATAGCCCATCACTAATATAA+TGG - chr1_1:69741371-69741390 None:intergenic 30.0%
! AAATGGTGTTGGAAAAATTC+TGG + chr1_1:69741788-69741807 Msa0039780:CDS 30.0%
TGATAAGGAAAAAAGGAGTA+TGG - chr1_1:69742062-69742081 None:intergenic 30.0%
TTAATACCCCAATCATATTC+AGG - chr1_1:69742182-69742201 None:intergenic 30.0%
! TGAATATGATTGGGGTATTA+AGG + chr1_1:69742181-69742200 Msa0039780:CDS 30.0%
ATTGATCCATGACCTTTAAA+TGG - chr1_1:69742230-69742249 None:intergenic 30.0%
AATAAAACCAAGCAACTTCA+GGG - chr1_1:69742284-69742303 None:intergenic 30.0%
TAATAAAACCAAGCAACTTC+AGG - chr1_1:69742285-69742304 None:intergenic 30.0%
!!! TTGCTTGGTTTTATTAGCTT+TGG + chr1_1:69742289-69742308 Msa0039780:intron 30.0%
!!! TGGTTTTATTAGCTTTGGTT+AGG + chr1_1:69742294-69742313 Msa0039780:intron 30.0%
! TCTGAATCGAAAACTTTTCA+AGG - chr1_1:69742333-69742352 None:intergenic 30.0%
ATCCAGTTTAATTACAGTAG+TGG + chr1_1:69742601-69742620 Msa0039780:intron 30.0%
ACTGAAGGATTGGAATATTA+AGG - chr1_1:69742704-69742723 None:intergenic 30.0%
! TATTGCAGTGTACTAGATTT+TGG - chr1_1:69742988-69743007 None:intergenic 30.0%
AGATCCCTAAAATTGTTTCA+TGG + chr1_1:69743070-69743089 Msa0039780:intron 30.0%
! GAGTACAAAGAATGACTTTT+GGG - chr1_1:69743101-69743120 None:intergenic 30.0%
! AGAGTACAAAGAATGACTTT+TGG - chr1_1:69743102-69743121 None:intergenic 30.0%
! GATTTGTCATTTACACTTTG+TGG + chr1_1:69743141-69743160 Msa0039780:intron 30.0%
CAAATTAACAATGCTCCTAA+AGG + chr1_1:69743396-69743415 Msa0039780:intron 30.0%
ATTCTTCGTGTTAGAAGTTA+CGG - chr1_1:69743447-69743466 None:intergenic 30.0%
AAAATTGGGTCTAGGTATAT+TGG + chr1_1:69743492-69743511 Msa0039780:intron 30.0%
!! GAGTAACATTGTTGTTTATC+TGG + chr1_1:69743536-69743555 Msa0039780:intron 30.0%
AGAGAATACTAGTATAGAGA+TGG - chr1_1:69743631-69743650 None:intergenic 30.0%
GATCATCTGATTATGTTGAA+AGG + chr1_1:69743740-69743759 Msa0039780:intron 30.0%
!!! GACTTGTTCTTTTAGAATGT+AGG + chr1_1:69743866-69743885 Msa0039780:intron 30.0%
! AGTTTTTATCCCCTTTAAAC+AGG + chr1_1:69743996-69744015 Msa0039780:intron 30.0%
! GTTTTTATCCCCTTTAAACA+GGG + chr1_1:69743997-69744016 Msa0039780:intron 30.0%
AATCCATATAAATCCCTACA+TGG + chr1_1:69744063-69744082 Msa0039780:intron 30.0%
TTACCATGTAGGGATTTATA+TGG - chr1_1:69744069-69744088 None:intergenic 30.0%
!! AGTTTTGTCCTGGTTTTTTT+TGG + chr1_1:69744136-69744155 Msa0039780:intron 30.0%
!! ACGTTGACTTATCAAATGTT+GGG + chr1_1:69744296-69744315 Msa0039780:CDS 30.0%
AATGTTGGGGTTACAAAATT+CGG + chr1_1:69744310-69744329 Msa0039780:CDS 30.0%
AGAAGATTGTACCTAAAATC+TGG - chr1_1:69744544-69744563 None:intergenic 30.0%
!!! TTGCAAATTTTGACTTTACG+GGG + chr1_1:69744577-69744596 Msa0039780:intron 30.0%
! ATCACTTTGTTTAAACAGAG+TGG + chr1_1:69744622-69744641 Msa0039780:intron 30.0%
! TCACTTTGTTTAAACAGAGT+GGG + chr1_1:69744623-69744642 Msa0039780:intron 30.0%
TGAAACTAATCATCAGTTCA+GGG - chr1_1:69745155-69745174 None:intergenic 30.0%
ATGAAACTAATCATCAGTTC+AGG - chr1_1:69745156-69745175 None:intergenic 30.0%
ATCATCAAGGAAACACATAA+AGG - chr1_1:69745306-69745325 None:intergenic 30.0%
! GGGGATAGAAATATGATTTT+AGG + chr1_1:69745357-69745376 Msa0039780:CDS 30.0%
TTAACACTGTTCTTGAAGTA+TGG - chr1_1:69745450-69745469 None:intergenic 30.0%
ATACTTCAAGAACAGTGTTA+AGG + chr1_1:69745449-69745468 Msa0039780:CDS 30.0%
!! TTATGCTTTGAAGAAACATG+TGG - chr1_1:69745862-69745881 None:intergenic 30.0%
ACAACTACTAGTTATGTTAC+GGG + chr1_1:69745931-69745950 Msa0039780:intron 30.0%
GTTGTTTGTTTCCAATTACT+AGG + chr1_1:69746110-69746129 Msa0039780:intron 30.0%
TGATGTTGTAAAGGAACATT+GGG + chr1_1:69746210-69746229 Msa0039780:CDS 30.0%
TATACACTTAACCTAGCTTA+TGG - chr1_1:69746369-69746388 None:intergenic 30.0%
TAACTTACCATACTTATCAC+CGG - chr1_1:69746502-69746521 None:intergenic 30.0%
ATCATACTTCAAATATGCTC+AGG - chr1_1:69746567-69746586 None:intergenic 30.0%
TATGATGAGTATTCTTCTAC+AGG + chr1_1:69746581-69746600 Msa0039780:intron 30.0%
ATGTAAAATCATCTGCAAAC+TGG - chr1_1:69746619-69746638 None:intergenic 30.0%
!!! TGTACGATGTTTTGTTTTAC+AGG + chr1_1:69746900-69746919 Msa0039780:intron 30.0%
!!! GTACGATGTTTTGTTTTACA+GGG + chr1_1:69746901-69746920 Msa0039780:intron 30.0%
ATAACCTATTAACGGTTTCA+AGG - chr1_1:69747013-69747032 None:intergenic 30.0%
!!! CATTTTTAAGTGATGACTGT+AGG - chr1_1:69747168-69747187 None:intergenic 30.0%
!! TACATTTTGATGAGTGATTG+TGG - chr1_1:69747199-69747218 None:intergenic 30.0%
!!! GGTTTGTCATTTTTCAGTTT+TGG + chr1_1:69747270-69747289 Msa0039780:three_prime_UTR 30.0%
!! TTAGTTTGTGTCTGTGTGAT+AGG - chr1_1:69740865-69740884 None:intergenic 35.0%
AATTGAAAGTGAGACATTGG+AGG - chr1_1:69741025-69741044 None:intergenic 35.0%
TGAAGTTTGAAGGAAGAAGA+AGG - chr1_1:69741072-69741091 None:intergenic 35.0%
! GAATTAAAGCGGACTCTTAA+CGG - chr1_1:69741102-69741121 None:intergenic 35.0%
!! TTTTTGTCCTTCAATGGGTT+TGG - chr1_1:69741274-69741293 None:intergenic 35.0%
!!! CCAGTTTTTTGTCCTTCAAT+GGG - chr1_1:69741279-69741298 None:intergenic 35.0%
!!! ACCAGTTTTTTGTCCTTCAA+TGG - chr1_1:69741280-69741299 None:intergenic 35.0%
GACAAAAAACTGGTACAAGT+GGG + chr1_1:69741286-69741305 Msa0039780:CDS 35.0%
TTACCTTGCAAATTGGATTC+AGG + chr1_1:69741459-69741478 Msa0039780:CDS 35.0%
AAACCTGAATCCAATTTGCA+AGG - chr1_1:69741465-69741484 None:intergenic 35.0%
!! ACTCCATTTTTGTAATCCTC+TGG - chr1_1:69741589-69741608 None:intergenic 35.0%
GGATTACAAAAATGGAGTGT+TGG + chr1_1:69741591-69741610 Msa0039780:CDS 35.0%
!! AAAAATGGAGTGTTGGTGTT+AGG + chr1_1:69741598-69741617 Msa0039780:CDS 35.0%
CTATGGTGACACATTCAAAA+AGG - chr1_1:69741666-69741685 None:intergenic 35.0%
ATCAAAATTGCTGCTGGAAA+TGG + chr1_1:69741771-69741790 Msa0039780:CDS 35.0%
ACATGAATCAAGAGCTAGTA+AGG + chr1_1:69741876-69741895 Msa0039780:intron 35.0%
CATGAATCAAGAGCTAGTAA+GGG + chr1_1:69741877-69741896 Msa0039780:intron 35.0%
GATTGGATAAACATCTGTCT+TGG + chr1_1:69741903-69741922 Msa0039780:intron 35.0%
TCTCATCCATTTAAAGGTCA+TGG + chr1_1:69742221-69742240 Msa0039780:intron 35.0%
!! ATTAGCTTTGGTTAGGACAT+TGG + chr1_1:69742301-69742320 Msa0039780:intron 35.0%
! TTTTTGTCGATGTATCGCTA+AGG + chr1_1:69742364-69742383 Msa0039780:intron 35.0%
! TTGTTATTGATGCATCGCTA+GGG + chr1_1:69742424-69742443 Msa0039780:intron 35.0%
GTCCACTACTGTAATTAAAC+TGG - chr1_1:69742606-69742625 None:intergenic 35.0%
TCCATCACTGACAAGATTTA+CGG + chr1_1:69742640-69742659 Msa0039780:CDS 35.0%
TATAGGGACACTTACAGATA+GGG - chr1_1:69742671-69742690 None:intergenic 35.0%
ATATAGGGACACTTACAGAT+AGG - chr1_1:69742672-69742691 None:intergenic 35.0%
TGTGCAAGTCAAACATTTCA+AGG - chr1_1:69742732-69742751 None:intergenic 35.0%
CAATATTTCATCCTCCAACA+AGG - chr1_1:69742762-69742781 None:intergenic 35.0%
TTCTCTCTCTTTCTTTGTCT+TGG + chr1_1:69743235-69743254 Msa0039780:intron 35.0%
TGTTCAAGTGGATAACCTTT+AGG - chr1_1:69743414-69743433 None:intergenic 35.0%
TTCTTCGTGTTAGAAGTTAC+GGG - chr1_1:69743446-69743465 None:intergenic 35.0%
GAATACTAGTATAGAGATGG+AGG - chr1_1:69743628-69743647 None:intergenic 35.0%
CGGCTAAAAAAATACCTGAA+TGG - chr1_1:69743721-69743740 None:intergenic 35.0%
GGTAGGATGATATATGCAAA+AGG - chr1_1:69743787-69743806 None:intergenic 35.0%
TTTATCAAAGGTTGTGCTTG+AGG - chr1_1:69743944-69743963 None:intergenic 35.0%
ATATGGTTCCCTGTTTAAAG+GGG - chr1_1:69744008-69744027 None:intergenic 35.0%
CATATGGTTCCCTGTTTAAA+GGG - chr1_1:69744009-69744028 None:intergenic 35.0%
ACATATGGTTCCCTGTTTAA+AGG - chr1_1:69744010-69744029 None:intergenic 35.0%
TTCCTGACTATTACCATGTA+GGG - chr1_1:69744079-69744098 None:intergenic 35.0%
TTTCCTGACTATTACCATGT+AGG - chr1_1:69744080-69744099 None:intergenic 35.0%
!! TGGATTTGTTGATTACTCGT+AGG - chr1_1:69744106-69744125 None:intergenic 35.0%
ATCTCAGAAATCTGTGTCAA+CGG - chr1_1:69744256-69744275 None:intergenic 35.0%
ACATTTGATAAGTCAACGTC+AGG - chr1_1:69744295-69744314 None:intergenic 35.0%
!! GACGTTGACTTATCAAATGT+TGG + chr1_1:69744295-69744314 Msa0039780:CDS 35.0%
!! CGTTGACTTATCAAATGTTG+GGG + chr1_1:69744297-69744316 Msa0039780:CDS 35.0%
AGATCCAGTTTCTGATTATC+TGG + chr1_1:69744354-69744373 Msa0039780:CDS 35.0%
! TTCTGATTATCTGGAGCTAT+TGG + chr1_1:69744363-69744382 Msa0039780:CDS 35.0%
! TTATTTCACGGCCAGATTTT+AGG + chr1_1:69744530-69744549 Msa0039780:CDS 35.0%
! CACTTTGTTTAAACAGAGTG+GGG + chr1_1:69744624-69744643 Msa0039780:intron 35.0%
AAGTTTATCCACAAAGATGG+GGG - chr1_1:69744744-69744763 None:intergenic 35.0%
CAAGTTTATCCACAAAGATG+GGG - chr1_1:69744745-69744764 None:intergenic 35.0%
CCAAGTTTATCCACAAAGAT+GGG - chr1_1:69744746-69744765 None:intergenic 35.0%
ACCAAGTTTATCCACAAAGA+TGG - chr1_1:69744747-69744766 None:intergenic 35.0%
ACTCCCTAAATGAGTTAAAG+GGG - chr1_1:69744790-69744809 None:intergenic 35.0%
CACTCCCTAAATGAGTTAAA+GGG - chr1_1:69744791-69744810 None:intergenic 35.0%
TGATGTCAAGTATGCAATGT+AGG + chr1_1:69744846-69744865 Msa0039780:intron 35.0%
!! GGAATACCTTTGGAAGATTT+TGG + chr1_1:69744883-69744902 Msa0039780:CDS 35.0%
GAAACTAATCATCAGTTCAG+GGG - chr1_1:69745154-69745173 None:intergenic 35.0%
! TTGAACTTTTGTTCAGGTGA+CGG + chr1_1:69745336-69745355 Msa0039780:intron 35.0%
TTGTTCTGTATTGCAATTGC+AGG + chr1_1:69745528-69745547 Msa0039780:intron 35.0%
TGTTCTGTATTGCAATTGCA+GGG + chr1_1:69745529-69745548 Msa0039780:intron 35.0%
AATATACCTCAAAGAAAGGG+AGG - chr1_1:69745612-69745631 None:intergenic 35.0%
AAATGACAAAAGACGAACCT+TGG + chr1_1:69745705-69745724 Msa0039780:intron 35.0%
CCAAAAAATTTCCAACCAGT+GGG - chr1_1:69745740-69745759 None:intergenic 35.0%
!!! CCACTGGTTGGAAATTTTTT+GGG + chr1_1:69745738-69745757 Msa0039780:CDS 35.0%
AAGGTATACGGAAACACAAT+AGG - chr1_1:69745889-69745908 None:intergenic 35.0%
GTTCACAAAACTTATGCTTG+TGG - chr1_1:69746058-69746077 None:intergenic 35.0%
CTCTGTATCTGATGTTGTAA+AGG + chr1_1:69746201-69746220 Msa0039780:CDS 35.0%
CTGATGTTGTAAAGGAACAT+TGG + chr1_1:69746209-69746228 Msa0039780:CDS 35.0%
! CTTTTCTAGATATGACTACG+AGG + chr1_1:69746252-69746271 Msa0039780:CDS 35.0%
ATATAGGAATGTGAATCCGA+AGG + chr1_1:69746426-69746445 Msa0039780:intron 35.0%
TATAGGAATGTGAATCCGAA+GGG + chr1_1:69746427-69746446 Msa0039780:intron 35.0%
AACTTACCATACTTATCACC+GGG - chr1_1:69746501-69746520 None:intergenic 35.0%
TAAAATCATCTGCAAACTGG+AGG - chr1_1:69746616-69746635 None:intergenic 35.0%
GAAGTGTGGTATCAAAACAA+GGG + chr1_1:69746759-69746778 Msa0039780:CDS 35.0%
AAGTGTGGTATCAAAACAAG+GGG + chr1_1:69746760-69746779 Msa0039780:CDS 35.0%
AACCATCCGTAAAAACAAAC+CGG - chr1_1:69746787-69746806 None:intergenic 35.0%
!!! TTGTTTTTACGGATGGTTCA+AGG + chr1_1:69746789-69746808 Msa0039780:CDS 35.0%
!!! TGTTTTGTTTTACAGGGAAC+AGG + chr1_1:69746907-69746926 Msa0039780:intron 35.0%
ATTGCCTTGAAACCGTTAAT+AGG + chr1_1:69747006-69747025 Msa0039780:CDS 35.0%
!! GAACTCTTTGAGCTTTGAAA+CGG - chr1_1:69747130-69747149 None:intergenic 35.0%
ATCTCAGGTAATGATAGGAT+AGG - chr1_1:69747243-69747262 None:intergenic 35.0%
ACTTGATCTCAGGTAATGAT+AGG - chr1_1:69747248-69747267 None:intergenic 35.0%
TCATTACCTGAGATCAAGTT+CGG + chr1_1:69747249-69747268 Msa0039780:three_prime_UTR 35.0%
TGTGACAGAAAGCCATTGAT+CGG - chr1_1:69740963-69740982 None:intergenic 40.0%
TGAAGGAAGAAGAAGGAGAT+TGG - chr1_1:69741065-69741084 None:intergenic 40.0%
!!! CGGAGAGTTTTGAAGTTTGA+AGG - chr1_1:69741082-69741101 None:intergenic 40.0%
GAAAGAACCTTAATGCCATG+AGG - chr1_1:69741174-69741193 None:intergenic 40.0%
ATTCCTACCAAACCCATTGA+AGG + chr1_1:69741264-69741283 Msa0039780:CDS 40.0%
CCCATTGAAGGACAAAAAAC+TGG + chr1_1:69741276-69741295 Msa0039780:CDS 40.0%
GGACAAAAAACTGGTACAAG+TGG + chr1_1:69741285-69741304 Msa0039780:CDS 40.0%
!! TACAAGTGGGCTACGAAAAA+AGG + chr1_1:69741299-69741318 Msa0039780:CDS 40.0%
!! CCATTTTTGTAATCCTCTGG+CGG - chr1_1:69741586-69741605 None:intergenic 40.0%
CTTTAATAGAGAAGCTGCAC+AGG + chr1_1:69741636-69741655 Msa0039780:CDS 40.0%
! GGTGTTGGAAAAATTCTGGT+TGG + chr1_1:69741792-69741811 Msa0039780:CDS 40.0%
AATCAAGAGCTAGTAAGGGA+TGG + chr1_1:69741881-69741900 Msa0039780:intron 40.0%
CTTCCTTATCACAGCAGAAA+CGG - chr1_1:69742024-69742043 None:intergenic 40.0%
TTTCTGCTGTGATAAGGAAG+AGG + chr1_1:69742024-69742043 Msa0039780:CDS 40.0%
CTTAAACTTCAACAGGCGAA+TGG + chr1_1:69742119-69742138 Msa0039780:intron 40.0%
! AAGCCTTTTGCCACTAAGTA+GGG - chr1_1:69742390-69742409 None:intergenic 40.0%
! GTTGTTATTGATGCATCGCT+AGG + chr1_1:69742423-69742442 Msa0039780:intron 40.0%
TGTTATTGATGCATCGCTAG+GGG + chr1_1:69742425-69742444 Msa0039780:intron 40.0%
ACATAACACACACTAGAGTC+TGG - chr1_1:69742536-69742555 None:intergenic 40.0%
!! ATCTTGTCAGTGATGGATTC+TGG - chr1_1:69742637-69742656 None:intergenic 40.0%
TCCGTAAATCTTGTCAGTGA+TGG - chr1_1:69742644-69742663 None:intergenic 40.0%
CATTTCAAGGAACAGACTGA+AGG - chr1_1:69742719-69742738 None:intergenic 40.0%
!!! CAGTGTACTAGATTTTGGCT+AGG - chr1_1:69742983-69743002 None:intergenic 40.0%
TCATTTACACTTTGTGGCGA+GGG + chr1_1:69743147-69743166 Msa0039780:intron 40.0%
!!! GGAATTTTTTCCCTCTCTAG+AGG + chr1_1:69743256-69743275 Msa0039780:intron 40.0%
!! TTTTCCCTCTCTAGAGGTAT+CGG + chr1_1:69743262-69743281 Msa0039780:intron 40.0%
GGTTATCCACTTGAACATTC+AGG + chr1_1:69743417-69743436 Msa0039780:intron 40.0%
ATCCCTACATGGTAATAGTC+AGG + chr1_1:69744074-69744093 Msa0039780:intron 40.0%
GGACAAAACTTTGTGTGCAA+TGG - chr1_1:69744126-69744145 None:intergenic 40.0%
!! TTGCACACAAAGTTTTGTCC+TGG + chr1_1:69744126-69744145 Msa0039780:intron 40.0%
AAAATTCGGAAGCTTCAGTG+TGG + chr1_1:69744324-69744343 Msa0039780:CDS 40.0%
AGCTCCAGATAATCAGAAAC+TGG - chr1_1:69744361-69744380 None:intergenic 40.0%
! TGATTATCTGGAGCTATTGG+AGG + chr1_1:69744366-69744385 Msa0039780:CDS 40.0%
CCCATCTTTGTGGATAAACT+TGG + chr1_1:69744743-69744762 Msa0039780:CDS 40.0%
TCTCCCCCTTTAACTCATTT+AGG + chr1_1:69744783-69744802 Msa0039780:intron 40.0%
CTCCCCCTTTAACTCATTTA+GGG + chr1_1:69744784-69744803 Msa0039780:intron 40.0%
CTCCCTAAATGAGTTAAAGG+GGG - chr1_1:69744789-69744808 None:intergenic 40.0%
CCACTCCCTAAATGAGTTAA+AGG - chr1_1:69744792-69744811 None:intergenic 40.0%
CCTTTAACTCATTTAGGGAG+TGG + chr1_1:69744789-69744808 Msa0039780:intron 40.0%
CCATGTCCAAAATCTTCCAA+AGG - chr1_1:69744892-69744911 None:intergenic 40.0%
!! CCTTTGGAAGATTTTGGACA+TGG + chr1_1:69744889-69744908 Msa0039780:CDS 40.0%
TCTCACGTTAGATTAGGATC+AGG - chr1_1:69744919-69744938 None:intergenic 40.0%
GCTGAAAATGGACCTGATTT+CGG + chr1_1:69745044-69745063 Msa0039780:CDS 40.0%
AAACCAAAGATGTGCAAGCT+GGG - chr1_1:69745098-69745117 None:intergenic 40.0%
TAAACCAAAGATGTGCAAGC+TGG - chr1_1:69745099-69745118 None:intergenic 40.0%
! TGAACTTTTGTTCAGGTGAC+GGG + chr1_1:69745337-69745356 Msa0039780:intron 40.0%
! TGGAATCGCTTCTTTTGCAT+TGG - chr1_1:69745430-69745449 None:intergenic 40.0%
!!! CCCACTGGTTGGAAATTTTT+TGG + chr1_1:69745737-69745756 Msa0039780:CDS 40.0%
CCCAAAAAATTTCCAACCAG+TGG - chr1_1:69745741-69745760 None:intergenic 40.0%
TTTGGGAATCTTATGGATGC+TGG + chr1_1:69745755-69745774 Msa0039780:CDS 40.0%
TTGGGAATCTTATGGATGCT+GGG + chr1_1:69745756-69745775 Msa0039780:CDS 40.0%
GCTGGGAATTTGTCAATTTG+CGG + chr1_1:69745773-69745792 Msa0039780:CDS 40.0%
CTGGGAATTTGTCAATTTGC+GGG + chr1_1:69745774-69745793 Msa0039780:CDS 40.0%
TGGGAATTTGTCAATTTGCG+GGG + chr1_1:69745775-69745794 Msa0039780:CDS 40.0%
ACTACTAGTTATGTTACGGG+TGG + chr1_1:69745934-69745953 Msa0039780:intron 40.0%
CTACTAGTTATGTTACGGGT+GGG + chr1_1:69745935-69745954 Msa0039780:intron 40.0%
TACTAGTTATGTTACGGGTG+GGG + chr1_1:69745936-69745955 Msa0039780:intron 40.0%
ACAACCTTGTAAAGGAGATG+AGG + chr1_1:69745993-69746012 Msa0039780:intron 40.0%
GCTAATACAGCCCTAGTAAT+TGG - chr1_1:69746124-69746143 None:intergenic 40.0%
TTACTAGGGCTGTATTAGCT+TGG + chr1_1:69746125-69746144 Msa0039780:intron 40.0%
TCTAGATATGACTACGAGGT+TGG + chr1_1:69746256-69746275 Msa0039780:intron 40.0%
ATAGGAATGTGAATCCGAAG+GGG + chr1_1:69746428-69746447 Msa0039780:intron 40.0%
TATCATCTTATTGGCCCCTT+CGG - chr1_1:69746445-69746464 None:intergenic 40.0%
TGCACATTGCAAGAACTTAC+AGG - chr1_1:69746650-69746669 None:intergenic 40.0%
! GGAAGTGTGGTATCAAAACA+AGG + chr1_1:69746758-69746777 Msa0039780:CDS 40.0%
AGGTCGTGTTTAGAAACATC+TGG - chr1_1:69746976-69746995 None:intergenic 40.0%
TCAAAGCTCAAAGAGTTCAC+AGG + chr1_1:69747132-69747151 Msa0039780:CDS 40.0%
CAAAGCTCAAAGAGTTCACA+GGG + chr1_1:69747133-69747152 Msa0039780:CDS 40.0%
TGTGTCTGTGTGATAGGAGT+AGG - chr1_1:69740859-69740878 None:intergenic 45.0%
CGTGTGCTTAAACCGATCAA+TGG + chr1_1:69740948-69740967 Msa0039780:exon 45.0%
TTGAGGTTTGAGCGCAGAAA+TGG - chr1_1:69741001-69741020 None:intergenic 45.0%
AGTGAGACATTGGAGGTTTG+AGG - chr1_1:69741018-69741037 None:intergenic 45.0%
AGAAGGAGATTGGAGAGTGA+AGG - chr1_1:69741055-69741074 None:intergenic 45.0%
AGCAATGGTTGTAGGAGAAG+AGG - chr1_1:69741148-69741167 None:intergenic 45.0%
TGAGGTTCAGCAATGGTTGT+AGG - chr1_1:69741156-69741175 None:intergenic 45.0%
ACAACCATTGCTGAACCTCA+TGG + chr1_1:69741156-69741175 Msa0039780:CDS 45.0%
AATGCCATGAGGTTCAGCAA+TGG - chr1_1:69741163-69741182 None:intergenic 45.0%
TGCTGAACCTCATGGCATTA+AGG + chr1_1:69741164-69741183 Msa0039780:CDS 45.0%
! TGTCCTTCAATGGGTTTGGT+AGG - chr1_1:69741270-69741289 None:intergenic 45.0%
!! AGTGGGCTACGAAAAAAGGT+TGG + chr1_1:69741303-69741322 Msa0039780:intron 45.0%
GTTTAATTCATTGCCGCCAG+AGG + chr1_1:69741570-69741589 Msa0039780:CDS 45.0%
CCGCCAGAGGATTACAAAAA+TGG + chr1_1:69741583-69741602 Msa0039780:CDS 45.0%
!! AATGGAGTGTTGGTGTTAGG+AGG + chr1_1:69741601-69741620 Msa0039780:CDS 45.0%
ATTGCTGCTGGAAATGGTGT+TGG + chr1_1:69741777-69741796 Msa0039780:CDS 45.0%
AGAGCTAGTAAGGGATGGAT+TGG + chr1_1:69741886-69741905 Msa0039780:intron 45.0%
AAACTTCAACAGGCGAATGG+TGG + chr1_1:69742122-69742141 Msa0039780:intron 45.0%
ATGAGTGCAAGCCATAATCC+CGG + chr1_1:69742152-69742171 Msa0039780:CDS 45.0%
CAATCATATTCAGGACCACC+GGG - chr1_1:69742173-69742192 None:intergenic 45.0%
CCAATCATATTCAGGACCAC+CGG - chr1_1:69742174-69742193 None:intergenic 45.0%
CGGTGGTCCTGAATATGATT+GGG + chr1_1:69742172-69742191 Msa0039780:CDS 45.0%
GGTGGTCCTGAATATGATTG+GGG + chr1_1:69742173-69742192 Msa0039780:CDS 45.0%
! CAAGCCTTTTGCCACTAAGT+AGG - chr1_1:69742391-69742410 None:intergenic 45.0%
CTACTTAGTGGCAAAAGGCT+TGG + chr1_1:69742389-69742408 Msa0039780:intron 45.0%
CAAGGAACAGACTGAAGGAT+TGG - chr1_1:69742714-69742733 None:intergenic 45.0%
TTGCACATGTGTTGCCTTGT+TGG + chr1_1:69742745-69742764 Msa0039780:intron 45.0%
! CTGCAATAGCACGAAGTGTT+TGG + chr1_1:69743000-69743019 Msa0039780:intron 45.0%
GTCATTTACACTTTGTGGCG+AGG + chr1_1:69743146-69743165 Msa0039780:intron 45.0%
!! GAGGTATCGGCTGAATTGTT+TGG + chr1_1:69743275-69743294 Msa0039780:intron 45.0%
TAGAATTGCATGCCACCACT+TGG + chr1_1:69743890-69743909 Msa0039780:intron 45.0%
GATCTCTGTTTGAGTCCAAG+TGG - chr1_1:69743908-69743927 None:intergenic 45.0%
AGTGGGGCTATATCATCTCA+TGG + chr1_1:69744640-69744659 Msa0039780:intron 45.0%
GTGGGGCTATATCATCTCAT+GGG + chr1_1:69744641-69744660 Msa0039780:intron 45.0%
TTATGCAACCCCCATCTTTG+TGG + chr1_1:69744733-69744752 Msa0039780:CDS 45.0%
!! GGATAAACTTGGTGCTACTC+CGG + chr1_1:69744754-69744773 Msa0039780:CDS 45.0%
TTAAAGGGGGAGAACCATAC+CGG - chr1_1:69744776-69744795 None:intergenic 45.0%
! GAACTTTTGTTCAGGTGACG+GGG + chr1_1:69745338-69745357 Msa0039780:intron 45.0%
AACTCCTTCAGACTCTGTAG+CGG + chr1_1:69745395-69745414 Msa0039780:CDS 45.0%
ATAACCGCTACAGAGTCTGA+AGG - chr1_1:69745402-69745421 None:intergenic 45.0%
GTTGAACCTCCCTTTCTTTG+AGG + chr1_1:69745603-69745622 Msa0039780:CDS 45.0%
AAAAGACGAACCTTGGATGC+AGG + chr1_1:69745712-69745731 Msa0039780:intron 45.0%
! ATTTGCGGGGAAGAGAGTTT+TGG + chr1_1:69745788-69745807 Msa0039780:CDS 45.0%
GACCACATTCGTGAGAAAGA+CGG + chr1_1:69745821-69745840 Msa0039780:CDS 45.0%
TTCCGTCTTTCTCACGAATG+TGG - chr1_1:69745826-69745845 None:intergenic 45.0%
TTCGTGAGAAAGACGGAATC+TGG + chr1_1:69745828-69745847 Msa0039780:CDS 45.0%
TCACTCGGACAACCTTGTAA+AGG + chr1_1:69745985-69746004 Msa0039780:intron 45.0%
ACCTTGTAAAGGAGATGAGG+TGG + chr1_1:69745996-69746015 Msa0039780:intron 45.0%
ACCACCTCATCTCCTTTACA+AGG - chr1_1:69746000-69746019 None:intergenic 45.0%
CTGGTTTCGTGTCTTTGTTG+CGG - chr1_1:69746168-69746187 None:intergenic 45.0%
GCAACAAAGACACGAAACCA+GGG + chr1_1:69746167-69746186 Msa0039780:CDS 45.0%
CAACAAAGACACGAAACCAG+GGG + chr1_1:69746168-69746187 Msa0039780:CDS 45.0%
ACAGAGATCAATTTCTCCCC+TGG - chr1_1:69746187-69746206 None:intergenic 45.0%
AAGGAACATTGGGCAACCTA+TGG + chr1_1:69746220-69746239 Msa0039780:CDS 45.0%
TATGCAGGTAGATGGAAGTG+TGG + chr1_1:69746745-69746764 Msa0039780:intron 45.0%
TGGTATCAAAACAAGGGGTC+CGG + chr1_1:69746765-69746784 Msa0039780:CDS 45.0%
!!! AGGGGTCCGGTTTGTTTTTA+CGG + chr1_1:69746778-69746797 Msa0039780:CDS 45.0%
!!! GTCCGGTTTGTTTTTACGGA+TGG + chr1_1:69746782-69746801 Msa0039780:CDS 45.0%
TCAAGGCAATTTGAGCGTCA+AGG - chr1_1:69746996-69747015 None:intergenic 45.0%
TAGGCGTAATGCACTCAACT+TGG - chr1_1:69747224-69747243 None:intergenic 45.0%
GACAAACCGAACTTGATCTC+AGG - chr1_1:69747258-69747277 None:intergenic 45.0%
!!! GAAATTTATTTATTTATTTT+AGG + chr1_1:69744675-69744694 Msa0039780:intron 5.0%
GTCTGTGTGATAGGAGTAGG+AGG - chr1_1:69740856-69740875 None:intergenic 50.0%
GGAGATTGGAGAGTGAAGGA+AGG - chr1_1:69741051-69741070 None:intergenic 50.0%
!! GTGTTGGTGTTAGGAGGTGA+TGG + chr1_1:69741607-69741626 Msa0039780:CDS 50.0%
CTTATCACAGCAGAAACGGC+TGG - chr1_1:69742020-69742039 None:intergenic 50.0%
CAGCCGTTTCTGCTGTGATA+AGG + chr1_1:69742018-69742037 Msa0039780:CDS 50.0%
TGCTGTGATAAGGAAGAGGC+AGG + chr1_1:69742028-69742047 Msa0039780:CDS 50.0%
ATTCAGGACCACCGGGATTA+TGG - chr1_1:69742166-69742185 None:intergenic 50.0%
CCGGTGGTCCTGAATATGAT+TGG + chr1_1:69742171-69742190 Msa0039780:CDS 50.0%
TAGTGCTCCCTGAAGTTGCT+TGG + chr1_1:69742274-69742293 Msa0039780:intron 50.0%
ATCGCTAAGGCCCTACTTAG+TGG + chr1_1:69742377-69742396 Msa0039780:intron 50.0%
AGGCCCTACTTAGTGGCAAA+AGG + chr1_1:69742384-69742403 Msa0039780:intron 50.0%
!! TCAGTGATGGATTCTGGTGC+AGG - chr1_1:69742631-69742650 None:intergenic 50.0%
! CACATGTGTTGCCTTGTTGG+AGG + chr1_1:69742748-69742767 Msa0039780:intron 50.0%
! TCAGCCGATACCTCTAGAGA+GGG - chr1_1:69743269-69743288 None:intergenic 50.0%
! TTCAGCCGATACCTCTAGAG+AGG - chr1_1:69743270-69743289 None:intergenic 50.0%
GGGTTGCCTGAATGTTCAAG+TGG - chr1_1:69743426-69743445 None:intergenic 50.0%
CTCTGTTTGAGTCCAAGTGG+TGG - chr1_1:69743905-69743924 None:intergenic 50.0%
TGCTTGAGGTAGCAGCTCTA+AGG - chr1_1:69743930-69743949 None:intergenic 50.0%
! TACGGGGTTGCATGTTGCTT+TGG + chr1_1:69744593-69744612 Msa0039780:intron 50.0%
!! AACTTGGTGCTACTCCGGTA+TGG + chr1_1:69744759-69744778 Msa0039780:intron 50.0%
TCACTAGCAGCTCCGAAATC+AGG - chr1_1:69745059-69745078 None:intergenic 50.0%
GATTTCGGAGCTGCTAGTGA+TGG + chr1_1:69745059-69745078 Msa0039780:CDS 50.0%
CAACCCAGCTTGCACATCTT+TGG + chr1_1:69745092-69745111 Msa0039780:intron 50.0%
! CTATCTAGAGCACCACTCGT+CGG - chr1_1:69745571-69745590 None:intergenic 50.0%
!!! GGGGAAGAGAGTTTTGGAAC+AGG + chr1_1:69745794-69745813 Msa0039780:CDS 50.0%
CGCAACAAAGACACGAAACC+AGG + chr1_1:69746166-69746185 Msa0039780:CDS 50.0%
TGTCTGTGTAAGAGCAAGCC+CGG + chr1_1:69746480-69746499 Msa0039780:CDS 50.0%
AGCAAGCCCGGTGATAAGTA+TGG + chr1_1:69746492-69746511 Msa0039780:CDS 50.0%
TTACAGGGAACAGGTTCTGC+TGG + chr1_1:69746916-69746935 Msa0039780:intron 50.0%
!! GGGTGGACTATGCTCCAAAA+TGG - chr1_1:69747304-69747323 None:intergenic 50.0%
AGTGCAAGCCATAATCCCGG+TGG + chr1_1:69742155-69742174 Msa0039780:CDS 55.0%
TACACTTTGTGGCGAGGGCT+TGG + chr1_1:69743152-69743171 Msa0039780:intron 55.0%
GATGCCATGCATGCAGTTGC+TGG + chr1_1:69744707-69744726 Msa0039780:CDS 55.0%
AGCACCAGCAACTGCATGCA+TGG - chr1_1:69744714-69744733 None:intergenic 55.0%
GCACGATCAATGCCGACGAG+TGG + chr1_1:69745556-69745575 Msa0039780:CDS 60.0%
CCAGTGGGCACCTGCATCCA+AGG - chr1_1:69745725-69745744 None:intergenic 65.0%
CCTTGGATGCAGGTGCCCAC+TGG + chr1_1:69745722-69745741 Msa0039780:intron 65.0%
GGATGCAGGTGCCCACTGGT+TGG + chr1_1:69745726-69745745 Msa0039780:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 69740833 69747443 69740833 ID=Msa0039780;Name=Msa0039780
chr1_1 mRNA 69740833 69747443 69740833 ID=Msa0039780-mRNA-1;Parent=Msa0039780;Name=Msa0039780-mRNA-1;_AED=0.14;_eAED=0.14;_QI=134|1|1|1|1|1|22|261|628
chr1_1 exon 69740833 69741185 69740833 ID=Msa0039780-mRNA-1:exon:22792;Parent=Msa0039780-mRNA-1
chr1_1 exon 69741255 69741320 69741255 ID=Msa0039780-mRNA-1:exon:22793;Parent=Msa0039780-mRNA-1
chr1_1 exon 69741436 69741480 69741436 ID=Msa0039780-mRNA-1:exon:22794;Parent=Msa0039780-mRNA-1
chr1_1 exon 69741565 69741657 69741565 ID=Msa0039780-mRNA-1:exon:22795;Parent=Msa0039780-mRNA-1
chr1_1 exon 69741765 69741817 69741765 ID=Msa0039780-mRNA-1:exon:22796;Parent=Msa0039780-mRNA-1
chr1_1 exon 69741998 69742049 69741998 ID=Msa0039780-mRNA-1:exon:22797;Parent=Msa0039780-mRNA-1
chr1_1 exon 69742134 69742202 69742134 ID=Msa0039780-mRNA-1:exon:22798;Parent=Msa0039780-mRNA-1
chr1_1 exon 69742607 69742675 69742607 ID=Msa0039780-mRNA-1:exon:22799;Parent=Msa0039780-mRNA-1
chr1_1 exon 69744265 69744387 69744265 ID=Msa0039780-mRNA-1:exon:22800;Parent=Msa0039780-mRNA-1
chr1_1 exon 69744499 69744551 69744499 ID=Msa0039780-mRNA-1:exon:22801;Parent=Msa0039780-mRNA-1
chr1_1 exon 69744697 69744775 69744697 ID=Msa0039780-mRNA-1:exon:22802;Parent=Msa0039780-mRNA-1
chr1_1 exon 69744868 69744932 69744868 ID=Msa0039780-mRNA-1:exon:22803;Parent=Msa0039780-mRNA-1
chr1_1 exon 69745013 69745080 69745013 ID=Msa0039780-mRNA-1:exon:22804;Parent=Msa0039780-mRNA-1
chr1_1 exon 69745352 69745470 69745352 ID=Msa0039780-mRNA-1:exon:22805;Parent=Msa0039780-mRNA-1
chr1_1 exon 69745550 69745624 69745550 ID=Msa0039780-mRNA-1:exon:22806;Parent=Msa0039780-mRNA-1
chr1_1 exon 69745734 69745849 69745734 ID=Msa0039780-mRNA-1:exon:22807;Parent=Msa0039780-mRNA-1
chr1_1 exon 69746132 69746273 69746132 ID=Msa0039780-mRNA-1:exon:22808;Parent=Msa0039780-mRNA-1
chr1_1 exon 69746432 69746513 69746432 ID=Msa0039780-mRNA-1:exon:22809;Parent=Msa0039780-mRNA-1
chr1_1 exon 69746603 69746649 69746603 ID=Msa0039780-mRNA-1:exon:22810;Parent=Msa0039780-mRNA-1
chr1_1 exon 69746752 69746829 69746752 ID=Msa0039780-mRNA-1:exon:22811;Parent=Msa0039780-mRNA-1
chr1_1 exon 69746922 69747027 69746922 ID=Msa0039780-mRNA-1:exon:22812;Parent=Msa0039780-mRNA-1
chr1_1 exon 69747115 69747443 69747115 ID=Msa0039780-mRNA-1:exon:22813;Parent=Msa0039780-mRNA-1
chr1_1 five_prime_UTR 69740833 69740966 69740833 ID=Msa0039780-mRNA-1:five_prime_utr;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69740967 69741185 69740967 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69741255 69741320 69741255 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69741436 69741480 69741436 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69741565 69741657 69741565 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69741765 69741817 69741765 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69741998 69742049 69741998 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69742134 69742202 69742134 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69742607 69742675 69742607 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69744265 69744387 69744265 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69744499 69744551 69744499 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69744697 69744775 69744697 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69744868 69744932 69744868 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69745013 69745080 69745013 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69745352 69745470 69745352 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69745550 69745624 69745550 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69745734 69745849 69745734 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69746132 69746273 69746132 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69746432 69746513 69746432 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69746603 69746649 69746603 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69746752 69746829 69746752 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69746922 69747027 69746922 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 CDS 69747115 69747182 69747115 ID=Msa0039780-mRNA-1:cds;Parent=Msa0039780-mRNA-1
chr1_1 three_prime_UTR 69747183 69747443 69747183 ID=Msa0039780-mRNA-1:three_prime_utr;Parent=Msa0039780-mRNA-1
Gene Sequence

>Msa0039780

ATGGCTTTCTGTCACAGACTCAACAACTTCACCATTTCTGCGCTCAAACCTCAAACCTCCAATGTCTCACTTTCAATTCAACCTTCCTTCACTCTCCAATCTCCTTCTTCTTCCTTCAAACTTCAAAACTCTCCGTTAAGAGTCCGCTTTAATTCAATCATCAGAGCAACTTCTTCATCCTCTTCTCCTACAACCATTGCTGAACCTCATGGCATTAAGATTAACTCTATTCCTACCAAACCCATTGAAGGACAAAAAACTGGTACAAGTGGGCTACGAAAAAAGGTGAAAGTGTTTATGCAAGAAAATTACCTTGCAAATTGGATTCAGGCACTGTTTAATTCATTGCCGCCAGAGGATTACAAAAATGGAGTGTTGGTGTTAGGAGGTGATGGTCGATACTTTAATAGAGAAGCTGCACAGATAATAATCAAAATTGCTGCTGGAAATGGTGTTGGAAAAATTCTGGTTGGAAAGGAAGGGATATTGTCAACACCAGCCGTTTCTGCTGTGATAAGGAAGAGGCAGGCGAATGGTGGATTTATTATGAGTGCAAGCCATAATCCCGGTGGTCCTGAATATGATTGGGGTATTAAGTTTAATTACAGTAGTGGACAACCTGCACCAGAATCCATCACTGACAAGATTTACGGAAACACCCTATCTATTTCTGAGATAAAGATTGCTGACATTCCTGACGTTGACTTATCAAATGTTGGGGTTACAAAATTCGGAAGCTTCAGTGTGGAAGTAATAGATCCAGTTTCTGATTATCTGGAGCTATTGGAGACAGTATTTGATTTTCAGCTAATCAAAGGTCTTATTTCACGGCCAGATTTTAGGTTTACATTTGATGCCATGCATGCAGTTGCTGGTGCTTATGCAACCCCCATCTTTGTGGATAAACTTGGTGCTACTCCGGATTCAATTTCAAATGGAATACCTTTGGAAGATTTTGGACATGGTCATCCTGATCCTAATCTAACATATGCAAAGGATCTTGTCAACATTATGTATGCTGAAAATGGACCTGATTTCGGAGCTGCTAGTGATGGTGACGGGGATAGAAATATGATTTTAGGAACAAGTTTCTTTGTAACTCCTTCAGACTCTGTAGCGGTTATTGCAGCCAATGCAAAAGAAGCGATTCCATACTTCAAGAACAGTGTTAAGGGTCTTGCACGATCAATGCCGACGAGTGGTGCTCTAGATAGAGTTGCTGAAAAGTTGAACCTCCCTTTCTTTGAGGTGCCCACTGGTTGGAAATTTTTTGGGAATCTTATGGATGCTGGGAATTTGTCAATTTGCGGGGAAGAGAGTTTTGGAACAGGTTCTGACCACATTCGTGAGAAAGACGGAATCTGGGCTGTATTAGCTTGGCTTTCTATTATTGCTCACCGCAACAAAGACACGAAACCAGGGGAGAAATTGATCTCTGTATCTGATGTTGTAAAGGAACATTGGGCAACCTATGGTAGAAATTTCTTTTCTAGATATGACTACGAGGAATGTGAATCCGAAGGGGCCAATAAGATGATAGAGTATCTAAGAGAGTGTCTGTGTAAGAGCAAGCCCGGTGATAAGTATGGAAGTTATGTCCTCCAGTTTGCAGATGATTTTACATACACTGATCCTGTAGATGGAAGTGTGGTATCAAAACAAGGGGTCCGGTTTGTTTTTACGGATGGTTCAAGGATTATTTATCGTTTATCAGGAACAGGTTCTGCTGGTGCAACTGTTAGAGTGTATATTGAACAGTTTGAACCAGATGTTTCTAAACACGACCTTGACGCTCAAATTGCCTTGAAACCGTTAATAGATTTAGCATTATCCGTTTCAAAGCTCAAAGAGTTCACAGGGAGAGAGAAGCCTACAGTCATCACTTAA

Protein sequence

>Msa0039780

MAFCHRLNNFTISALKPQTSNVSLSIQPSFTLQSPSSSFKLQNSPLRVRFNSIIRATSSSSSPTTIAEPHGIKINSIPTKPIEGQKTGTSGLRKKVKVFMQENYLANWIQALFNSLPPEDYKNGVLVLGGDGRYFNREAAQIIIKIAAGNGVGKILVGKEGILSTPAVSAVIRKRQANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKIADIPDVDLSNVGVTKFGSFSVEVIDPVSDYLELLETVFDFQLIKGLISRPDFRFTFDAMHAVAGAYATPIFVDKLGATPDSISNGIPLEDFGHGHPDPNLTYAKDLVNIMYAENGPDFGAASDGDGDRNMILGTSFFVTPSDSVAVIAANAKEAIPYFKNSVKGLARSMPTSGALDRVAEKLNLPFFEVPTGWKFFGNLMDAGNLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAHRNKDTKPGEKLISVSDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRECLCKSKPGDKYGSYVLQFADDFTYTDPVDGSVVSKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDVSKHDLDAQIALKPLIDLALSVSKLKEFTGREKPTVIT*