AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0186400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0186400 MtrunA17_Chr3g0143831 98.198 333 4 1 1 331 1 333 0.0 661
Msa0186400 MtrunA17_Chr1g0207651 27.184 309 153 11 76 317 60 363 2.74e-25 104
Msa0186400 MtrunA17_Chr6g0451961 24.540 326 197 7 39 317 31 354 1.23e-18 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0186400 AT1G63610.1 68.249 337 95 5 1 329 6 338 3.56e-148 421
Msa0186400 AT1G63610.2 63.529 255 81 5 1 247 6 256 2.04e-93 278
Msa0186400 AT1G63610.3 78.505 107 22 1 69 174 76 182 5.37e-54 175
Msa0186400 AT2G14910.1 25.243 309 167 7 65 316 72 373 5.90e-23 98.6
Msa0186400 AT5G14970.1 24.188 277 169 5 80 317 79 353 1.18e-21 94.7
Msa0186400 AT2G14910.2 27.660 235 138 5 65 274 72 299 3.83e-19 87.4

Find 101 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTTATGGTTTGAATTTC+TGG 0.007347 2_1:+1100243 None:intergenic
TGAAAGAAAGTGTTCCTTTA+TGG 0.117262 2_1:+1100230 None:intergenic
GACCGTGCAGCCGGAATTTA+TGG 0.149781 2_1:-1099876 Msa0186400:CDS
AAAAGGTGCAAAATCTAATT+AGG 0.159317 2_1:+1096902 None:intergenic
AACTTGGAAAACTGCTTTAT+TGG 0.187386 2_1:-1097091 Msa0186400:CDS
CAGAGTGCCGTTAGGGGATT+TGG 0.219495 2_1:+1100174 None:intergenic
TATTTGATTGTTTACACTTT+TGG 0.226606 2_1:-1096656 Msa0186400:three_prime_UTR
GGTCCCTCACATTAACTATT+TGG 0.230088 2_1:+1096806 None:intergenic
TCCGAGGCTCAAGAGATTTC+AGG 0.291456 2_1:+1098326 None:intergenic
GGCAATTCAGCCAGCTTTGC+AGG 0.291964 2_1:+1096999 None:intergenic
TATTTGACAGCCTGAAACTA+TGG 0.296055 2_1:-1096718 Msa0186400:three_prime_UTR
AAATGATTCACCATAGTTTC+AGG 0.297027 2_1:+1096708 None:intergenic
GTTTAAGCAGCCGATAAATT+TGG 0.298138 2_1:-1096963 Msa0186400:exon
CCTTCATCCAATCAATAAAA+AGG 0.309501 2_1:+1096885 None:intergenic
TCCGGACGTGCAAGATAAAA+AGG 0.320165 2_1:-1098854 Msa0186400:intron
TTTGGAACTGCAAGAAAGTT+TGG 0.323667 2_1:-1098890 Msa0186400:CDS
ATTAGGTGGAACAACATTTC+TGG 0.347794 2_1:-1098463 Msa0186400:CDS
GGGACACAAAAGAATGTTTC+AGG 0.353665 2_1:-1098493 Msa0186400:CDS
TCCAGAAATTCAAACCATAA+AGG 0.354255 2_1:-1100244 Msa0186400:CDS
TACTTCATGACCAAATTTAT+CGG 0.364178 2_1:+1096953 None:intergenic
ATGTTTCAGGTGAAGTCATT+AGG 0.366658 2_1:-1098480 Msa0186400:CDS
ACAAACAATTCCATAAATTC+CGG 0.373472 2_1:+1099866 None:intergenic
TGTGTCCCAGGTGCATAGTC+TGG 0.375806 2_1:+1098508 None:intergenic
GAGCAGAAGAGAAATCTTAC+TGG 0.381488 2_1:-1099909 Msa0186400:CDS
TTTGGAACAAGTTGCCCTTC+CGG 0.390092 2_1:-1098872 Msa0186400:CDS
AGGGCACTTGGCTCCGACTT+GGG 0.396316 2_1:+1096922 None:intergenic
AAAACTGCTTTATTGGTTGA+TGG 0.399137 2_1:-1097084 Msa0186400:CDS
CTTTATTGGTTGATGGTGGT+TGG 0.401910 2_1:-1097077 Msa0186400:CDS
AAAGGTGCAAAATCTAATTA+GGG 0.408426 2_1:+1096903 None:intergenic
TAGAAATGCACAATACCGTT+TGG 0.412122 2_1:-1098908 Msa0186400:CDS
TTGACGAAGGTGAACGAGTT+CGG 0.414444 2_1:+1100275 None:intergenic
GAGACTAGTGCATCCGAACT+TGG 0.446534 2_1:-1097107 Msa0186400:CDS
AAGGCCTAGGAGTGACATAA+AGG 0.446674 2_1:-1096866 Msa0186400:three_prime_UTR
TTTATTGGTTGATGGTGGTT+GGG 0.446688 2_1:-1097076 Msa0186400:CDS
TCTTGAGCCTCGGAATTTGA+AGG 0.450089 2_1:-1098317 Msa0186400:intron
CATTTCTGGACCTGAGAGAA+TGG 0.452153 2_1:-1098449 Msa0186400:CDS
ACTTGGAACTCCTGCAAAGC+TGG 0.466951 2_1:-1097009 Msa0186400:CDS
CATAAGCTGTGCAAGGTTCT+CGG 0.467098 2_1:+1098960 None:intergenic
AAAAGTACCAGAGTGCCGTT+AGG 0.471684 2_1:+1100166 None:intergenic
TATTGATTGGATGAAGGCCT+AGG 0.476878 2_1:-1096879 Msa0186400:three_prime_UTR
CTATTTGGTGACCACTAGTC+CGG 0.477758 2_1:+1096821 None:intergenic
AGACAGACACACAGACGGAC+AGG 0.479947 2_1:+1100475 None:intergenic
CAATGCACAAAATGAACTGT+TGG 0.481591 2_1:-1098353 Msa0186400:CDS
GAAGAAGATAGTATGAATTG+AGG 0.483318 2_1:+1100334 None:intergenic
TAGGGCACTTGGCTCCGACT+TGG 0.483340 2_1:+1096921 None:intergenic
AACTTTCTTGCAGTTCCAAA+CGG 0.487921 2_1:+1098893 None:intergenic
TGCAGATCCTACTCAAATGA+AGG 0.495494 2_1:-1097837 Msa0186400:intron
CAGACGGTGACAAATATGAT+TGG 0.500013 2_1:-1099680 Msa0186400:CDS
AAGCTGGCTGAATTGCCGCC+AGG 0.504319 2_1:-1096993 Msa0186400:CDS
TAGGATTTAACTAGTAGTGC+TGG 0.507226 2_1:-1097911 Msa0186400:CDS
TACATTTATAAAGCGCCTAC+TGG 0.507895 2_1:-1097864 Msa0186400:CDS
AAAGTACCAGAGTGCCGTTA+GGG 0.507908 2_1:+1100167 None:intergenic
CAAAATCTAATTAGGGCACT+TGG 0.510576 2_1:+1096910 None:intergenic
ACCTGAAATCTCTTGAGCCT+CGG 0.512343 2_1:-1098327 Msa0186400:CDS
TAAGTTGCATATAAATCAAA+GGG 0.514116 2_1:+1096739 None:intergenic
CATTGAAGTTCGTTATGACA+TGG 0.518591 2_1:-1097039 Msa0186400:CDS
AACAATCACATTGTAAAGTG+TGG 0.519671 2_1:-1100549 Msa0186400:five_prime_UTR
TATGACATGGAAAGAGTACT+TGG 0.520400 2_1:-1097026 Msa0186400:CDS
GAATCATTTAAATACAGAAA+AGG 0.521196 2_1:-1096694 Msa0186400:three_prime_UTR
GGGCACTTGGCTCCGACTTG+GGG 0.526389 2_1:+1096923 None:intergenic
TTCTCCTTTATGTCACTCCT+AGG 0.527238 2_1:+1096862 None:intergenic
ATAAGTTGCATATAAATCAA+AGG 0.528802 2_1:+1096738 None:intergenic
CTGTGTGTCTGTCTTTGAAG+TGG 0.532644 2_1:-1100466 Msa0186400:five_prime_UTR
ATGAATTGAGGTCTGAGTGA+GGG 0.534715 2_1:+1100346 None:intergenic
AGACAACACGTTACCGGTGG+AGG 0.537586 2_1:+1099833 None:intergenic
CAAATCCCCTAACGGCACTC+TGG 0.539235 2_1:-1100173 Msa0186400:intron
TGATTTCCACCTCCCACGTA+CGG 0.539744 2_1:+1100513 None:intergenic
GATATTCCAGACTATGCACC+TGG 0.544069 2_1:-1098514 Msa0186400:CDS
ATGTACAGTGTCATGATGAC+TGG 0.544482 2_1:-1098940 Msa0186400:CDS
GTATGTCAAGACCGTGCAGC+CGG 0.545800 2_1:-1099885 Msa0186400:CDS
GAGGAGTTAAATCGTCAAGT+TGG 0.554733 2_1:-1098388 Msa0186400:CDS
ATATAACCGTACGTGGGAGG+TGG 0.556361 2_1:-1100519 Msa0186400:five_prime_UTR
TTCCATAAATTCCGGCTGCA+CGG 0.558125 2_1:+1099874 None:intergenic
AGGCAAACCTTCATTTGAGT+AGG 0.567766 2_1:+1097830 None:intergenic
TGTGTGTCTGTCTTTGAAGT+GGG 0.581883 2_1:-1100465 Msa0186400:five_prime_UTR
TTTAACTAGTAGTGCTGGAG+AGG 0.582109 2_1:-1097906 Msa0186400:CDS
GTACATTGAAATACTTGAAG+CGG 0.584560 2_1:-1098416 Msa0186400:CDS
TTTATCTTGCACGTCCGGAA+GGG 0.586926 2_1:+1098858 None:intergenic
TAGGAGTGACATAAAGGAGA+AGG 0.594324 2_1:-1096860 Msa0186400:three_prime_UTR
GTCACCAAATAGTTAATGTG+AGG 0.600007 2_1:-1096810 Msa0186400:three_prime_UTR
ACAATCACATTGTAAAGTGT+GGG 0.602829 2_1:-1100548 Msa0186400:five_prime_UTR
TATGAATTGAGGTCTGAGTG+AGG 0.609786 2_1:+1100345 None:intergenic
CACTGTACATAAGCTGTGCA+AGG 0.614814 2_1:+1098953 None:intergenic
TTTCAGGTGAAGTCATTAGG+TGG 0.620061 2_1:-1098477 Msa0186400:CDS
AAATCAACCTTCAAATTCCG+AGG 0.621737 2_1:+1098310 None:intergenic
ACTGCTTTATTGGTTGATGG+TGG 0.623526 2_1:-1097081 Msa0186400:CDS
AATACTTGAAGCGGAGATCG+AGG 0.627103 2_1:-1098407 Msa0186400:CDS
TAGGATCTGCAACAGCCAGT+AGG 0.630746 2_1:+1097849 None:intergenic
GACAGACACACAGACGGACA+GGG 0.637453 2_1:+1100476 None:intergenic
TTCAAAGACAGACACACAGA+CGG 0.641607 2_1:+1100470 None:intergenic
TATATATAACCGTACGTGGG+AGG 0.645439 2_1:-1100522 Msa0186400:five_prime_UTR
GGTGAATCCAAATCCCCTAA+CGG 0.646624 2_1:-1100181 Msa0186400:CDS
ACAGTGAACTATGCTTTGTG+CGG 0.657658 2_1:+1100429 None:intergenic
TTGAAGTGGGAAGTAAAACA+AGG 0.661437 2_1:-1100452 Msa0186400:five_prime_UTR
AAGTACTGTTGTCCCCAAGT+CGG 0.664345 2_1:-1096935 Msa0186400:three_prime_UTR
AAGTACCAGAGTGCCGTTAG+GGG 0.671487 2_1:+1100168 None:intergenic
TCACCAAATAGTTAATGTGA+GGG 0.683718 2_1:-1096809 Msa0186400:three_prime_UTR
GTTATATATATAACCGTACG+TGG 0.693996 2_1:-1100526 Msa0186400:five_prime_UTR
TTATATATATAACCGTACGT+GGG 0.732877 2_1:-1100525 Msa0186400:five_prime_UTR
TGTGGATGCTATGAGACAGA+CGG 0.739945 2_1:-1099696 Msa0186400:CDS
ATATTCCAGACTATGCACCT+GGG 0.741358 2_1:-1098513 Msa0186400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCTTTCTGTTATTAATT+AGG - chr2_1:1097404-1097423 Msa0186400:intron 15.0%
!! TTGTTATAGAAAAAAATTGA+GGG + chr2_1:1097479-1097498 None:intergenic 15.0%
!! ATTGTTATAGAAAAAAATTG+AGG + chr2_1:1097480-1097499 None:intergenic 15.0%
!! ATCATTAAATCATAAAACAA+CGG + chr2_1:1097553-1097572 None:intergenic 15.0%
!!! TTGTTTTATGATTTAATGAT+AGG - chr2_1:1097553-1097572 Msa0186400:intron 15.0%
!! GATGTTTGTATTTATTATTT+AGG + chr2_1:1097949-1097968 None:intergenic 15.0%
!! ATATAATCTTACAATATTGT+AGG - chr2_1:1098588-1098607 Msa0186400:intron 15.0%
!!! TTAATTTTCTCCTTAAATTA+AGG - chr2_1:1099633-1099652 Msa0186400:intron 15.0%
!!! ATTTCTTCAAATTGATTTAT+GGG - chr2_1:1099870-1099889 Msa0186400:CDS 15.0%
!! TGTTATAGAAAAAAATTGAG+GGG + chr2_1:1097478-1097497 None:intergenic 20.0%
!! TCATATCATATCATGTAAAT+AGG + chr2_1:1097907-1097926 None:intergenic 20.0%
!!! ACCATTTTGTTTTTTTATTC+AGG - chr2_1:1098138-1098157 Msa0186400:intron 20.0%
!! ACCTGAATAAAAAAACAAAA+TGG + chr2_1:1098142-1098161 None:intergenic 20.0%
!!! TGTGATCAATTTTGAAAATA+CGG - chr2_1:1098943-1098962 Msa0186400:CDS 20.0%
!! AATTTAAGAACATTGTTTGT+TGG - chr2_1:1099148-1099167 Msa0186400:intron 20.0%
!! AATGTTAACCCAAATAATAA+TGG + chr2_1:1099433-1099452 None:intergenic 20.0%
!! GTTAACATTGAATTTAATGT+TGG - chr2_1:1099444-1099463 Msa0186400:intron 20.0%
!!! GTTGGAATTGTATTATTTTT+AGG - chr2_1:1099462-1099481 Msa0186400:intron 20.0%
!!! ACAATTTTCTCCTTAATTTA+AGG + chr2_1:1099646-1099665 None:intergenic 20.0%
!! TTGTTACAATGGAAAATAAA+AGG - chr2_1:1099662-1099681 Msa0186400:CDS 20.0%
!! TAAGATAGGAAACTAAATAT+TGG - chr2_1:1099721-1099740 Msa0186400:intron 20.0%
!!! CTTTTTTATTAAATGAGGAA+AGG + chr2_1:1099804-1099823 None:intergenic 20.0%
!!! GATTTCTTCAAATTGATTTA+TGG - chr2_1:1099869-1099888 Msa0186400:CDS 20.0%
!! AGTCTATAAAAAATCAGAAT+TGG + chr2_1:1099988-1100007 None:intergenic 20.0%
!! TAAGTTGCATATAAATCAAA+GGG + chr2_1:1100388-1100407 None:intergenic 20.0%
!! ATAAGTTGCATATAAATCAA+AGG + chr2_1:1100389-1100408 None:intergenic 20.0%
!! GAATCATTTAAATACAGAAA+AGG - chr2_1:1100430-1100449 Msa0186400:five_prime_UTR 20.0%
!!! TATTTGATTGTTTACACTTT+TGG - chr2_1:1100468-1100487 Msa0186400:five_prime_UTR 20.0%
! TTATATATATAACCGTACGT+GGG - chr2_1:1096599-1096618 Msa0186400:three_prime_UTR 25.0%
! ACAAACAATTCCATAAATTC+CGG + chr2_1:1097261-1097280 None:intergenic 25.0%
!! TTCTGTTATTAATTAGGTTG+TGG - chr2_1:1097410-1097429 Msa0186400:intron 25.0%
! GTTATAGAAAAAAATTGAGG+GGG + chr2_1:1097477-1097496 None:intergenic 25.0%
! AATTGCAACTGTAAGATTAT+CGG - chr2_1:1097497-1097516 Msa0186400:intron 25.0%
!! AAAATTAAACAAGTACCGTA+CGG + chr2_1:1097704-1097723 None:intergenic 25.0%
! AATGAACTTATATCAGTTCT+TGG + chr2_1:1097884-1097903 None:intergenic 25.0%
!! TATTTAGGATTGCTGTATAT+GGG + chr2_1:1097934-1097953 None:intergenic 25.0%
!! TTATTTAGGATTGCTGTATA+TGG + chr2_1:1097935-1097954 None:intergenic 25.0%
!! AGAGAAAGTATAAAGCAAAA+AGG + chr2_1:1098095-1098114 None:intergenic 25.0%
! ACATAAAACTCTTCATTCTT+AGG + chr2_1:1098449-1098468 None:intergenic 25.0%
!!! AGTTTTATGTCTTGTGAATT+TGG - chr2_1:1098459-1098478 Msa0186400:CDS 25.0%
!!! GTGATCAATTTTGAAAATAC+GGG - chr2_1:1098944-1098963 Msa0186400:CDS 25.0%
! GAGATGTAATTCTAGATATT+TGG + chr2_1:1099026-1099045 None:intergenic 25.0%
! GTTAAATCCTACATGAAAAA+AGG + chr2_1:1099204-1099223 None:intergenic 25.0%
! TCTGTTCACCATTATTATTT+GGG - chr2_1:1099422-1099441 Msa0186400:intron 25.0%
!! TGTGTTTTATGTGTTTATCA+TGG - chr2_1:1099490-1099509 Msa0186400:intron 25.0%
! AAAGGCTATTGAAAAACAAT+AGG - chr2_1:1099552-1099571 Msa0186400:intron 25.0%
! TAAGGAGAAAATTGTTACAA+TGG - chr2_1:1099651-1099670 Msa0186400:CDS 25.0%
!! TTCCTATCTTATTGTTTTCT+AGG + chr2_1:1099712-1099731 None:intergenic 25.0%
!! ATTGGAATATTTTCCAATAG+AGG - chr2_1:1099739-1099758 Msa0186400:intron 25.0%
!!! CAGTGCTTTTTTATTAAATG+AGG + chr2_1:1099809-1099828 None:intergenic 25.0%
! TAATAGTCTAACTGACTATA+GGG - chr2_1:1099829-1099848 Msa0186400:intron 25.0%
! AATTTGAAGAAATCTAGTTG+TGG + chr2_1:1099863-1099882 None:intergenic 25.0%
! TACTTCATGACCAAATTTAT+CGG + chr2_1:1100174-1100193 None:intergenic 25.0%
!! AAAGGTGCAAAATCTAATTA+GGG + chr2_1:1100224-1100243 None:intergenic 25.0%
!! AAAAGGTGCAAAATCTAATT+AGG + chr2_1:1100225-1100244 None:intergenic 25.0%
!! TTTTGCACCTTTTTATTGAT+TGG - chr2_1:1100232-1100251 Msa0186400:CDS 25.0%
!! TTTTGGATTGAATAATCTGA+AGG - chr2_1:1100485-1100504 Msa0186400:five_prime_UTR 25.0%
AACAATCACATTGTAAAGTG+TGG - chr2_1:1096575-1096594 Msa0186400:three_prime_UTR 30.0%
ACAATCACATTGTAAAGTGT+GGG - chr2_1:1096576-1096595 Msa0186400:three_prime_UTR 30.0%
GTTATATATATAACCGTACG+TGG - chr2_1:1096598-1096617 Msa0186400:three_prime_UTR 30.0%
GAAGAAGATAGTATGAATTG+AGG + chr2_1:1096793-1096812 None:intergenic 30.0%
TCCAGAAATTCAAACCATAA+AGG - chr2_1:1096880-1096899 Msa0186400:three_prime_UTR 30.0%
TCCTTTATGGTTTGAATTTC+TGG + chr2_1:1096884-1096903 None:intergenic 30.0%
!! TGAAAGAAAGTGTTCCTTTA+TGG + chr2_1:1096897-1096916 None:intergenic 30.0%
AGAAATCACATTCACTAAGA+TGG + chr2_1:1097390-1097409 None:intergenic 30.0%
AAAAACTAGTTGAAGAGAGA+GGG + chr2_1:1097529-1097548 None:intergenic 30.0%
TAAAAACTAGTTGAAGAGAG+AGG + chr2_1:1097530-1097549 None:intergenic 30.0%
! AAATTAAACAAGTACCGTAC+GGG + chr2_1:1097703-1097722 None:intergenic 30.0%
ACGATAAAACTGTACCAAAA+AGG - chr2_1:1097761-1097780 Msa0186400:intron 30.0%
!!! TGTAATGACTTTTTTGCTTG+TGG - chr2_1:1097989-1098008 Msa0186400:intron 30.0%
!! CATAATGTTGCTTTAGCAAT+TGG + chr2_1:1098043-1098062 None:intergenic 30.0%
! ATTTCTCTTCCTTGTCTTTT+TGG - chr2_1:1098299-1098318 Msa0186400:intron 30.0%
! TTTCTCTTCCTTGTCTTTTT+GGG - chr2_1:1098300-1098319 Msa0186400:intron 30.0%
! TCAGACGTTATTGAAGTATT+TGG - chr2_1:1098333-1098352 Msa0186400:CDS 30.0%
AAGTATTTGGATAACTCCTA+GGG - chr2_1:1098346-1098365 Msa0186400:CDS 30.0%
! TTGTTGGGTATATTAGTTTC+AGG - chr2_1:1098423-1098442 Msa0186400:CDS 30.0%
GTACATTGAAATACTTGAAG+CGG - chr2_1:1098708-1098727 Msa0186400:intron 30.0%
! GTTCTTAAATTTTAAGCGCA+GGG + chr2_1:1099139-1099158 None:intergenic 30.0%
! TGTTCTTAAATTTTAAGCGC+AGG + chr2_1:1099140-1099159 None:intergenic 30.0%
TGAAAAAAGGAAGGTTACTA+TGG + chr2_1:1099191-1099210 None:intergenic 30.0%
!!! TAACCTTCCTTTTTTCATGT+AGG - chr2_1:1099194-1099213 Msa0186400:intron 30.0%
AATCCTACATGAAAAAAGGA+AGG + chr2_1:1099200-1099219 None:intergenic 30.0%
TAATGAAGTCTCCTTAAGAA+CGG + chr2_1:1099357-1099376 None:intergenic 30.0%
CTCTGTTCACCATTATTATT+TGG - chr2_1:1099421-1099440 Msa0186400:intron 30.0%
! GTTTTATGTGTTTATCATGG+AGG - chr2_1:1099493-1099512 Msa0186400:intron 30.0%
TGCCTAGAAAACAATAAGAT+AGG - chr2_1:1099707-1099726 Msa0186400:intron 30.0%
GTAATAGTCTAACTGACTAT+AGG - chr2_1:1099828-1099847 Msa0186400:intron 30.0%
ACTATGTGTGATTGTTTGAT+CGG - chr2_1:1099893-1099912 Msa0186400:CDS 30.0%
AATGATACTACTGACAGTAA+TGG + chr2_1:1099943-1099962 None:intergenic 30.0%
! ATAAAGCAGTTTTCCAAGTT+CGG + chr2_1:1100033-1100052 None:intergenic 30.0%
AACTTGGAAAACTGCTTTAT+TGG - chr2_1:1100033-1100052 Msa0186400:intron 30.0%
! AAAACTGCTTTATTGGTTGA+TGG - chr2_1:1100040-1100059 Msa0186400:intron 30.0%
CCTTCATCCAATCAATAAAA+AGG + chr2_1:1100242-1100261 None:intergenic 30.0%
!! CCTTTTTATTGATTGGATGA+AGG - chr2_1:1100239-1100258 Msa0186400:CDS 30.0%
TCACCAAATAGTTAATGTGA+GGG - chr2_1:1100315-1100334 Msa0186400:CDS 30.0%
! AAAAGTTCCATTTTACCAAG+CGG + chr2_1:1100354-1100373 None:intergenic 30.0%
AAATGATTCACCATAGTTTC+AGG + chr2_1:1100419-1100438 None:intergenic 30.0%
TTGAAGTGGGAAGTAAAACA+AGG - chr2_1:1096672-1096691 Msa0186400:three_prime_UTR 35.0%
TCAAGCATCCAAAAATGATG+CGG - chr2_1:1096921-1096940 Msa0186400:three_prime_UTR 35.0%
AACGTAATTCCCATGGAATA+GGG - chr2_1:1097053-1097072 Msa0186400:CDS 35.0%
AATAGGGCAAGTGTAGAATA+GGG - chr2_1:1097069-1097088 Msa0186400:CDS 35.0%
ATAACAAGACAACACGTTAC+CGG + chr2_1:1097300-1097319 None:intergenic 35.0%
AATCGATCAACTAACAGTGT+CGG + chr2_1:1097326-1097345 None:intergenic 35.0%
GGTTATGATAGCTAATCTCT+TGG - chr2_1:1097591-1097610 Msa0186400:intron 35.0%
TTATTTCCCAACTTTCTCTG+CGG - chr2_1:1097642-1097661 Msa0186400:intron 35.0%
! AATTAAACAAGTACCGTACG+GGG + chr2_1:1097702-1097721 None:intergenic 35.0%
AAACTGTACCAAAAAGGATG+CGG - chr2_1:1097767-1097786 Msa0186400:intron 35.0%
GAACTTATATCAGTTCTTGG+TGG + chr2_1:1097881-1097900 None:intergenic 35.0%
TCACACTGAAATAAGAAGCA+TGG + chr2_1:1098118-1098137 None:intergenic 35.0%
TAGAAATGCACAATACCGTT+TGG - chr2_1:1098216-1098235 Msa0186400:intron 35.0%
AACTTTCTTGCAGTTCCAAA+CGG + chr2_1:1098234-1098253 None:intergenic 35.0%
! TTTGGAACTGCAAGAAAGTT+TGG - chr2_1:1098234-1098253 Msa0186400:intron 35.0%
CACATAATCCCAAAAAGACA+AGG + chr2_1:1098311-1098330 None:intergenic 35.0%
!!! CTTGTCTTTTTGGGATTATG+TGG - chr2_1:1098309-1098328 Msa0186400:intron 35.0%
! GAAGTATTTGGATAACTCCT+AGG - chr2_1:1098345-1098364 Msa0186400:CDS 35.0%
AAAACCTCATTGCTGCTAAA+TGG - chr2_1:1098488-1098507 Msa0186400:CDS 35.0%
! ATGGCTGTGACATTTTCTTT+TGG - chr2_1:1098507-1098526 Msa0186400:CDS 35.0%
! TACAGACTAAAGCATTCACT+TGG + chr2_1:1098557-1098576 None:intergenic 35.0%
! ATGTTTCAGGTGAAGTCATT+AGG - chr2_1:1098644-1098663 Msa0186400:intron 35.0%
ATTAGGTGGAACAACATTTC+TGG - chr2_1:1098661-1098680 Msa0186400:intron 35.0%
!! TTTTTAGCATCCATTCTCTC+AGG + chr2_1:1098688-1098707 None:intergenic 35.0%
CAATGCACAAAATGAACTGT+TGG - chr2_1:1098771-1098790 Msa0186400:intron 35.0%
AAATCAACCTTCAAATTCCG+AGG + chr2_1:1098817-1098836 None:intergenic 35.0%
AACACCATATTAAACCTACC+TGG + chr2_1:1099058-1099077 None:intergenic 35.0%
! AAATTTTAAGCGCAGGGAAT+GGG + chr2_1:1099133-1099152 None:intergenic 35.0%
! TAAATTTTAAGCGCAGGGAA+TGG + chr2_1:1099134-1099153 None:intergenic 35.0%
TAGGATTTAACTAGTAGTGC+TGG - chr2_1:1099213-1099232 Msa0186400:intron 35.0%
! TACATTTATAAAGCGCCTAC+TGG - chr2_1:1099260-1099279 Msa0186400:intron 35.0%
GAAGGCAATTAGAGATATTG+AGG + chr2_1:1099317-1099336 None:intergenic 35.0%
AATGAAGTCTCCTTAAGAAC+GGG + chr2_1:1099356-1099375 None:intergenic 35.0%
GAACTCTTATGTTACCTGAT+TGG - chr2_1:1099519-1099538 Msa0186400:intron 35.0%
CTTTCATGTACTTTCCAATC+AGG + chr2_1:1099536-1099555 None:intergenic 35.0%
! CTGATTGGAAAGTACATGAA+AGG - chr2_1:1099534-1099553 Msa0186400:intron 35.0%
TCACTATAAAAACCAGCCTT+GGG + chr2_1:1099605-1099624 None:intergenic 35.0%
CTCGTCAATTGAGATAGTAA+GGG + chr2_1:1099765-1099784 None:intergenic 35.0%
TCTCGTCAATTGAGATAGTA+AGG + chr2_1:1099766-1099785 None:intergenic 35.0%
CTATGTGTGATTGTTTGATC+GGG - chr2_1:1099894-1099913 Msa0186400:CDS 35.0%
TATGTGTGATTGTTTGATCG+GGG - chr2_1:1099895-1099914 Msa0186400:CDS 35.0%
!! TTTATTGGTTGATGGTGGTT+GGG - chr2_1:1100048-1100067 Msa0186400:intron 35.0%
CATTGAAGTTCGTTATGACA+TGG - chr2_1:1100085-1100104 Msa0186400:intron 35.0%
!! TATGACATGGAAAGAGTACT+TGG - chr2_1:1100098-1100117 Msa0186400:intron 35.0%
GTTTAAGCAGCCGATAAATT+TGG - chr2_1:1100161-1100180 Msa0186400:intron 35.0%
! CAAAATCTAATTAGGGCACT+TGG + chr2_1:1100217-1100236 None:intergenic 35.0%
GTCACCAAATAGTTAATGTG+AGG - chr2_1:1100314-1100333 Msa0186400:CDS 35.0%
TATTTGACAGCCTGAAACTA+TGG - chr2_1:1100406-1100425 Msa0186400:five_prime_UTR 35.0%
TATATATAACCGTACGTGGG+AGG - chr2_1:1096602-1096621 Msa0186400:three_prime_UTR 40.0%
TTCAAAGACAGACACACAGA+CGG + chr2_1:1096657-1096676 None:intergenic 40.0%
!! TGTGTGTCTGTCTTTGAAGT+GGG - chr2_1:1096659-1096678 Msa0186400:three_prime_UTR 40.0%
ACAGTGAACTATGCTTTGTG+CGG + chr2_1:1096698-1096717 None:intergenic 40.0%
ATGAATTGAGGTCTGAGTGA+GGG + chr2_1:1096781-1096800 None:intergenic 40.0%
TATGAATTGAGGTCTGAGTG+AGG + chr2_1:1096782-1096801 None:intergenic 40.0%
CTGGAAAAAGCAATTGACGA+AGG + chr2_1:1096865-1096884 None:intergenic 40.0%
CAAGCATCCAAAAATGATGC+GGG - chr2_1:1096922-1096941 Msa0186400:three_prime_UTR 40.0%
ACTTGTGAACGTAATTCCCA+TGG - chr2_1:1097046-1097065 Msa0186400:CDS 40.0%
GAACGTAATTCCCATGGAAT+AGG - chr2_1:1097052-1097071 Msa0186400:CDS 40.0%
GAATAGGGCAAGTGTAGAAT+AGG - chr2_1:1097068-1097087 Msa0186400:CDS 40.0%
TTTCTCTTCTGCTCTTTGAC+TGG + chr2_1:1097209-1097228 None:intergenic 40.0%
GAGCAGAAGAGAAATCTTAC+TGG - chr2_1:1097215-1097234 Msa0186400:intron 40.0%
CAGACGGTGACAAATATGAT+TGG - chr2_1:1097444-1097463 Msa0186400:intron 40.0%
AACTGTACCAAAAAGGATGC+GGG - chr2_1:1097768-1097787 Msa0186400:intron 40.0%
!! AGTTGCAAAAGTGCTCAGAT+TGG - chr2_1:1097802-1097821 Msa0186400:intron 40.0%
!!! CGAGTGATAGTTTTAGCACT+AGG - chr2_1:1098013-1098032 Msa0186400:intron 40.0%
!!! GTGATAGTTTTAGCACTAGG+TGG - chr2_1:1098016-1098035 Msa0186400:intron 40.0%
CAACATTATGCCATCTAGCT+GGG - chr2_1:1098053-1098072 Msa0186400:intron 40.0%
ATGTACAGTGTCATGATGAC+TGG - chr2_1:1098184-1098203 Msa0186400:intron 40.0%
! ACCTTTTTATCTTGCACGTC+CGG + chr2_1:1098274-1098293 None:intergenic 40.0%
CTAATTTCCTTTGTGTGTCG+TGG - chr2_1:1098376-1098395 Msa0186400:CDS 40.0%
ATATTCCAGACTATGCACCT+GGG - chr2_1:1098611-1098630 Msa0186400:intron 40.0%
! GAAACATTCTTTTGTGTCCC+AGG + chr2_1:1098631-1098650 None:intergenic 40.0%
GGGACACAAAAGAATGTTTC+AGG - chr2_1:1098631-1098650 Msa0186400:intron 40.0%
! TTTCAGGTGAAGTCATTAGG+TGG - chr2_1:1098647-1098666 Msa0186400:intron 40.0%
GAGGAGTTAAATCGTCAAGT+TGG - chr2_1:1098736-1098755 Msa0186400:intron 40.0%
AGCACCAGGTAGGTTTAATA+TGG - chr2_1:1099051-1099070 Msa0186400:intron 40.0%
! TTTAACTAGTAGTGCTGGAG+AGG - chr2_1:1099218-1099237 Msa0186400:intron 40.0%
TGCAGATCCTACTCAAATGA+AGG - chr2_1:1099287-1099306 Msa0186400:intron 40.0%
AGGCAAACCTTCATTTGAGT+AGG + chr2_1:1099297-1099316 None:intergenic 40.0%
TTATGTTATTCCTCAGCCCA+AGG - chr2_1:1099586-1099605 Msa0186400:intron 40.0%
CTCACTATAAAAACCAGCCT+TGG + chr2_1:1099606-1099625 None:intergenic 40.0%
!!! CAAGGCTGGTTTTTATAGTG+AGG - chr2_1:1099604-1099623 Msa0186400:intron 40.0%
TGAAGAAATCTAGTTGTGGC+AGG + chr2_1:1099859-1099878 None:intergenic 40.0%
AGTAATGGCAAGCAAAGAGA+AGG + chr2_1:1099928-1099947 None:intergenic 40.0%
!! ACTGCTTTATTGGTTGATGG+TGG - chr2_1:1100043-1100062 Msa0186400:intron 40.0%
!! CTTTATTGGTTGATGGTGGT+TGG - chr2_1:1100047-1100066 Msa0186400:intron 40.0%
! GCTTAAACATTTTCACCTGG+CGG + chr2_1:1100149-1100168 None:intergenic 40.0%
! GCTGCTTAAACATTTTCACC+TGG + chr2_1:1100152-1100171 None:intergenic 40.0%
! TATTGATTGGATGAAGGCCT+AGG - chr2_1:1100245-1100264 Msa0186400:CDS 40.0%
TTCTCCTTTATGTCACTCCT+AGG + chr2_1:1100265-1100284 None:intergenic 40.0%
TAGGAGTGACATAAAGGAGA+AGG - chr2_1:1100264-1100283 Msa0186400:CDS 40.0%
GGTCCCTCACATTAACTATT+TGG + chr2_1:1100321-1100340 None:intergenic 40.0%
TTACCAAGCGGAAAAAGGAA+TGG + chr2_1:1100342-1100361 None:intergenic 40.0%
! CCATTTTACCAAGCGGAAAA+AGG + chr2_1:1100347-1100366 None:intergenic 40.0%
! CCTTTTTCCGCTTGGTAAAA+TGG - chr2_1:1100344-1100363 Msa0186400:CDS 40.0%
! CTGTGTGTCTGTCTTTGAAG+TGG - chr2_1:1096658-1096677 Msa0186400:three_prime_UTR 45.0%
TTGACGAAGGTGAACGAGTT+CGG + chr2_1:1096852-1096871 None:intergenic 45.0%
! GGATTCACCCGCATCATTTT+TGG + chr2_1:1096932-1096951 None:intergenic 45.0%
GGTGAATCCAAATCCCCTAA+CGG - chr2_1:1096943-1096962 Msa0186400:three_prime_UTR 45.0%
!! AAAGTACCAGAGTGCCGTTA+GGG + chr2_1:1096960-1096979 None:intergenic 45.0%
!! AAAAGTACCAGAGTGCCGTT+AGG + chr2_1:1096961-1096980 None:intergenic 45.0%
CTACACTTGCCCTATTCCAT+GGG + chr2_1:1097065-1097084 None:intergenic 45.0%
TCTACACTTGCCCTATTCCA+TGG + chr2_1:1097066-1097085 None:intergenic 45.0%
TTCCATAAATTCCGGCTGCA+CGG + chr2_1:1097253-1097272 None:intergenic 45.0%
!! TGTAAAAAGAGCACCTCCAC+CGG - chr2_1:1097278-1097297 Msa0186400:intron 45.0%
TGTGGATGCTATGAGACAGA+CGG - chr2_1:1097428-1097447 Msa0186400:intron 45.0%
GATAGGCAGTTTCTACATGC+TGG - chr2_1:1097570-1097589 Msa0186400:intron 45.0%
GACTAACCGCAGAGAAAGTT+GGG + chr2_1:1097651-1097670 None:intergenic 45.0%
AGACTAACCGCAGAGAAAGT+TGG + chr2_1:1097652-1097671 None:intergenic 45.0%
TACGGGGTAGAGCATACAAA+AGG + chr2_1:1097686-1097705 None:intergenic 45.0%
TTTGTATGCTCTACCCCGTA+CGG - chr2_1:1097686-1097705 Msa0186400:intron 45.0%
!! AAAAGTGCTCAGATTGGCCT+GGG - chr2_1:1097808-1097827 Msa0186400:intron 45.0%
! TCAGTTCTTGGTGGTCTTTC+TGG + chr2_1:1097872-1097891 None:intergenic 45.0%
GCAACATTATGCCATCTAGC+TGG - chr2_1:1098052-1098071 Msa0186400:intron 45.0%
TGTGAATCAACCCAGCTAGA+TGG + chr2_1:1098066-1098085 None:intergenic 45.0%
CATAAGCTGTGCAAGGTTCT+CGG + chr2_1:1098167-1098186 None:intergenic 45.0%
CACTGTACATAAGCTGTGCA+AGG + chr2_1:1098174-1098193 None:intergenic 45.0%
! TTTGGAACAAGTTGCCCTTC+CGG - chr2_1:1098252-1098271 Msa0186400:intron 45.0%
TTTATCTTGCACGTCCGGAA+GGG + chr2_1:1098269-1098288 None:intergenic 45.0%
! TTTTATCTTGCACGTCCGGA+AGG + chr2_1:1098270-1098289 None:intergenic 45.0%
TCCGGACGTGCAAGATAAAA+AGG - chr2_1:1098270-1098289 Msa0186400:intron 45.0%
GGAAATTAGCTACACACCCT+AGG + chr2_1:1098365-1098384 None:intergenic 45.0%
TGCTATTCCACGACACACAA+AGG + chr2_1:1098386-1098405 None:intergenic 45.0%
ACAGCCATTTAGCAGCAATG+AGG + chr2_1:1098495-1098514 None:intergenic 45.0%
GATATTCCAGACTATGCACC+TGG - chr2_1:1098610-1098629 Msa0186400:intron 45.0%
! CATTTCTGGACCTGAGAGAA+TGG - chr2_1:1098675-1098694 Msa0186400:intron 45.0%
AATACTTGAAGCGGAGATCG+AGG - chr2_1:1098717-1098736 Msa0186400:intron 45.0%
ACCTGAAATCTCTTGAGCCT+CGG - chr2_1:1098797-1098816 Msa0186400:intron 45.0%
TCTTGAGCCTCGGAATTTGA+AGG - chr2_1:1098807-1098826 Msa0186400:intron 45.0%
CAGTACAGATCAGCATAGAG+AGG + chr2_1:1098913-1098932 None:intergenic 45.0%
TTACATCTCTGTTCAGCACC+AGG - chr2_1:1099037-1099056 Msa0186400:intron 45.0%
GGACATGGGAGAAAAACAGA+AGG + chr2_1:1099335-1099354 None:intergenic 45.0%
TCTCCTTAAGAACGGGACAT+GGG + chr2_1:1099349-1099368 None:intergenic 45.0%
TTTGACAGACTGCAAGGACA+AGG + chr2_1:1099382-1099401 None:intergenic 45.0%
GTCGAATTTGACAGACTGCA+AGG + chr2_1:1099388-1099407 None:intergenic 45.0%
GAGATAGTAAGGGCCTCTAT+TGG + chr2_1:1099755-1099774 None:intergenic 45.0%
TGAGGAAAGGATTCGAGACA+GGG + chr2_1:1099791-1099810 None:intergenic 45.0%
ATGAGGAAAGGATTCGAGAC+AGG + chr2_1:1099792-1099811 None:intergenic 45.0%
! AAGTACTGTTGTCCCCAAGT+CGG - chr2_1:1100189-1100208 Msa0186400:CDS 45.0%
AAGGCCTAGGAGTGACATAA+AGG - chr2_1:1100258-1100277 Msa0186400:CDS 45.0%
!!! AGGCTGCACTTTTAGAGTTC+CGG - chr2_1:1100284-1100303 Msa0186400:CDS 45.0%
!!! CTTTTAGAGTTCCGGACTAG+TGG - chr2_1:1100292-1100311 Msa0186400:CDS 45.0%
! CTATTTGGTGACCACTAGTC+CGG + chr2_1:1100306-1100325 None:intergenic 45.0%
!!! AAAATAAATAATATTTTTGT+TGG - chr2_1:1098407-1098426 Msa0186400:CDS 5.0%
!!! AAATAAATAATATTTTTGTT+GGG - chr2_1:1098408-1098427 Msa0186400:CDS 5.0%
ATATAACCGTACGTGGGAGG+TGG - chr2_1:1096605-1096624 Msa0186400:three_prime_UTR 50.0%
TGATTTCCACCTCCCACGTA+CGG + chr2_1:1096614-1096633 None:intergenic 50.0%
!! AAGTACCAGAGTGCCGTTAG+GGG + chr2_1:1096959-1096978 None:intergenic 50.0%
ACAAGACAACACGTTACCGG+TGG + chr2_1:1097297-1097316 None:intergenic 50.0%
!! CAAAAGTGCTCAGATTGGCC+TGG - chr2_1:1097807-1097826 Msa0186400:intron 50.0%
TCCGAGGCTCAAGAGATTTC+AGG + chr2_1:1098801-1098820 None:intergenic 50.0%
AGTCCACATCAGCTGGATGA+AGG + chr2_1:1098874-1098893 None:intergenic 50.0%
ATCTCTGTTCAGCACCAGGT+AGG - chr2_1:1099041-1099060 Msa0186400:intron 50.0%
! TTTTAAGCGCAGGGAATGGG+AGG + chr2_1:1099130-1099149 None:intergenic 50.0%
TAGGATCTGCAACAGCCAGT+AGG + chr2_1:1099278-1099297 None:intergenic 50.0%
TCTCCCATGTCCCGTTCTTA+AGG - chr2_1:1099343-1099362 Msa0186400:intron 50.0%
GTCTCCTTAAGAACGGGACA+TGG + chr2_1:1099350-1099369 None:intergenic 50.0%
TAAAAACCAGCCTTGGGCTG+AGG + chr2_1:1099599-1099618 None:intergenic 50.0%
GAGACTAGTGCATCCGAACT+TGG - chr2_1:1100017-1100036 Msa0186400:intron 50.0%
ACTTGGAACTCCTGCAAAGC+TGG - chr2_1:1100115-1100134 Msa0186400:intron 50.0%
! GGACCATTCCTTTTTCCGCT+TGG - chr2_1:1100336-1100355 Msa0186400:CDS 50.0%
GACAGACACACAGACGGACA+GGG + chr2_1:1096651-1096670 None:intergenic 55.0%
AGACAGACACACAGACGGAC+AGG + chr2_1:1096652-1096671 None:intergenic 55.0%
!! CAGAGTGCCGTTAGGGGATT+TGG + chr2_1:1096953-1096972 None:intergenic 55.0%
CAAATCCCCTAACGGCACTC+TGG - chr2_1:1096951-1096970 Msa0186400:three_prime_UTR 55.0%
GTATGTCAAGACCGTGCAGC+CGG - chr2_1:1097239-1097258 Msa0186400:intron 55.0%
GACCGTGCAGCCGGAATTTA+TGG - chr2_1:1097248-1097267 Msa0186400:intron 55.0%
AGACAACACGTTACCGGTGG+AGG + chr2_1:1097294-1097313 None:intergenic 55.0%
! CGCTATGCCCGCATCCTTTT+TGG + chr2_1:1097778-1097797 None:intergenic 55.0%
!! TCAGATTGGCCTGGGAACAC+TGG - chr2_1:1097816-1097835 Msa0186400:intron 55.0%
GTTTGAACGCCAGTGTTCCC+AGG + chr2_1:1097828-1097847 None:intergenic 55.0%
! GGTCTTTCTGGCACGATGGT+CGG + chr2_1:1097860-1097879 None:intergenic 55.0%
! TGGTGGTCTTTCTGGCACGA+TGG + chr2_1:1097864-1097883 None:intergenic 55.0%
TGTGTCCCAGGTGCATAGTC+TGG + chr2_1:1098619-1098638 None:intergenic 55.0%
CACATCAGCTGGATGAAGGC+AGG + chr2_1:1098870-1098889 None:intergenic 55.0%
CTGCCTTCATCCAGCTGATG+TGG - chr2_1:1098868-1098887 Msa0186400:CDS 55.0%
AGCAGACAGTCCACATCAGC+TGG + chr2_1:1098881-1098900 None:intergenic 55.0%
GTTATTCCTCAGCCCAAGGC+TGG - chr2_1:1099590-1099609 Msa0186400:intron 55.0%
GGCAATTCAGCCAGCTTTGC+AGG + chr2_1:1100128-1100147 None:intergenic 55.0%
! GCACGATGGTCGGTTCTTGG+CGG + chr2_1:1097850-1097869 None:intergenic 60.0%
! CTGGCACGATGGTCGGTTCT+TGG + chr2_1:1097853-1097872 None:intergenic 60.0%
AAGCTGGCTGAATTGCCGCC+AGG - chr2_1:1100131-1100150 Msa0186400:intron 60.0%
! AGGGCACTTGGCTCCGACTT+GGG + chr2_1:1100205-1100224 None:intergenic 60.0%
! TAGGGCACTTGGCTCCGACT+TGG + chr2_1:1100206-1100225 None:intergenic 60.0%
! GGGCACTTGGCTCCGACTTG+GGG + chr2_1:1100204-1100223 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 1096574 1100572 1096574 ID=Msa0186400;Name=Msa0186400
chr2_1 mRNA 1096574 1100572 1096574 ID=Msa0186400-mRNA-1;Parent=Msa0186400;Name=Msa0186400-mRNA-1;_AED=0.07;_eAED=0.07;_QI=180|1|1|1|1|1|7|406|331
chr2_1 exon 1096574 1097141 1096574 ID=Msa0186400-mRNA-1:exon:486;Parent=Msa0186400-mRNA-1
chr2_1 exon 1097838 1097930 1097838 ID=Msa0186400-mRNA-1:exon:485;Parent=Msa0186400-mRNA-1
chr2_1 exon 1098318 1098536 1098318 ID=Msa0186400-mRNA-1:exon:484;Parent=Msa0186400-mRNA-1
chr2_1 exon 1098855 1098986 1098855 ID=Msa0186400-mRNA-1:exon:483;Parent=Msa0186400-mRNA-1
chr2_1 exon 1099640 1099720 1099640 ID=Msa0186400-mRNA-1:exon:482;Parent=Msa0186400-mRNA-1
chr2_1 exon 1099847 1099936 1099847 ID=Msa0186400-mRNA-1:exon:481;Parent=Msa0186400-mRNA-1
chr2_1 exon 1100174 1100572 1100174 ID=Msa0186400-mRNA-1:exon:480;Parent=Msa0186400-mRNA-1
chr2_1 five_prime_UTR 1100393 1100572 1100393 ID=Msa0186400-mRNA-1:five_prime_utr;Parent=Msa0186400-mRNA-1
chr2_1 CDS 1100174 1100392 1100174 ID=Msa0186400-mRNA-1:cds;Parent=Msa0186400-mRNA-1
chr2_1 CDS 1099847 1099936 1099847 ID=Msa0186400-mRNA-1:cds;Parent=Msa0186400-mRNA-1
chr2_1 CDS 1099640 1099720 1099640 ID=Msa0186400-mRNA-1:cds;Parent=Msa0186400-mRNA-1
chr2_1 CDS 1098855 1098986 1098855 ID=Msa0186400-mRNA-1:cds;Parent=Msa0186400-mRNA-1
chr2_1 CDS 1098318 1098536 1098318 ID=Msa0186400-mRNA-1:cds;Parent=Msa0186400-mRNA-1
chr2_1 CDS 1097838 1097930 1097838 ID=Msa0186400-mRNA-1:cds;Parent=Msa0186400-mRNA-1
chr2_1 CDS 1096980 1097141 1096980 ID=Msa0186400-mRNA-1:cds;Parent=Msa0186400-mRNA-1
chr2_1 three_prime_UTR 1096574 1096979 1096574 ID=Msa0186400-mRNA-1:three_prime_utr;Parent=Msa0186400-mRNA-1
Gene Sequence

>Msa0186400

ATGATGTATTTGTTGACTGCGAAACCCTCACTCAGACCTCAATTCATACTATCTTCTTCTTCTTCTTATTCAATTTCTACTTCTCGATTCTCTTTCCGAACTCGTTCACCTTCGTCAATTGCTTTTTCCAGAAATTCAAACCATAAAGGAACACTTTCTTTCAGAATTCAAGCATCCAAAAATGATGCGGGTGAATCCAAATCCCCTAACGGCACTCTGTCAAAGAGCAGAAGAGAAATCTTACTGGAGTATGTCAAGACCGTGCAGCCGGAATTTATGGAATTGTTTGTAAAAAGAGCACCTCCACCGGTTGTGGATGCTATGAGACAGACGGTGACAAATATGATTGGAACACTGCCCCCTCAATTTTTTTCTATAACAATTGCAACTGTAGCCGAGAACCTTGCACAGCTTATGTACAGTGTCATGATGACTGGATACATGTTTAGAAATGCACAATACCGTTTGGAACTGCAAGAAAGTTTGGAACAAGTTGCCCTTCCGGACGTGCAAGATAAAAAGGATATTCCAGACTATGCACCTGGGACACAAAAGAATGTTTCAGGTGAAGTCATTAGGTGGAACAACATTTCTGGACCTGAGAGAATGGATGCTAAAAAGTACATTGAAATACTTGAAGCGGAGATCGAGGAGTTAAATCGTCAAGTTGGAAGACAGTCTAGCAATGCACAAAATGAACTGTTGGAATACCTGAAATCTCTTGAGCCTCGGAATTTGAAGGATTTAACTAGTAGTGCTGGAGAGGATGTTGTGCTTGCGATGAATACATTTATAAAGCGCCTACTGGCTGTTGCAGATCCTACTCAAATGAAGACTAGTGTGACTGAGACTAGTGCATCCGAACTTGGAAAACTGCTTTATTGGTTGATGGTGGTTGGGTACAGCATTCGCAACATTGAAGTTCGTTATGACATGGAAAGAGTACTTGGAACTCCTGCAAAGCTGGCTGAATTGCCGCCAGGTGAAAATGTTTAA

Protein sequence

>Msa0186400

MMYLLTAKPSLRPQFILSSSSSYSISTSRFSFRTRSPSSIAFSRNSNHKGTLSFRIQASKNDAGESKSPNGTLSKSRREILLEYVKTVQPEFMELFVKRAPPPVVDAMRQTVTNMIGTLPPQFFSITIATVAENLAQLMYSVMMTGYMFRNAQYRLELQESLEQVALPDVQDKKDIPDYAPGTQKNVSGEVIRWNNISGPERMDAKKYIEILEAEIEELNRQVGRQSSNAQNELLEYLKSLEPRNLKDLTSSAGEDVVLAMNTFIKRLLAVADPTQMKTSVTETSASELGKLLYWLMVVGYSIRNIEVRYDMERVLGTPAKLAELPPGENV*