AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0087370


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0087370 MtrunA17_Chr1g0204131 98.248 628 11 0 1 628 1 628 0.0 1269
Msa0087370 MtrunA17_Chr8g0391241 58.304 578 217 7 74 628 6 582 0.0 668
Msa0087370 MtrunA17_Chr1g0204151 94.872 117 6 0 456 572 20 136 9.45e-75 236
Msa0087370 MtrunA17_Chr1g0204161 95.745 47 2 0 582 628 13 59 4.33e-24 95.5
Msa0087370 MtrunA17_Chr4g0067871 55.072 69 31 0 560 628 5 73 8.97e-18 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0087370 AT5G51820.1 84.590 597 89 1 35 628 27 623 0.0 1042
Msa0087370 AT1G70730.3 58.864 581 214 6 73 628 82 662 0.0 688
Msa0087370 AT1G70730.1 58.864 581 214 6 73 628 5 585 0.0 687
Msa0087370 AT1G70730.2 58.793 580 214 6 74 628 26 605 0.0 686
Msa0087370 AT1G23190.1 60.000 580 208 7 73 628 4 583 0.0 685

Find 153 sgRNAs with CRISPR-Local

Find 415 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATACCTTTGGAAGATTT+TGG 0.116294 1_2:+68302059 Msa0087370:CDS
TAGATACTCTATCATCTTAT+TGG 0.171603 1_2:-68303627 None:intergenic
ATATTTAGCTTCTCTGTAAA+AGG 0.251377 1_2:+68304583 Msa0087370:three_prime_UTR
ATTCAGGACCACCGGGATTA+TGG 0.258958 1_2:-68299356 None:intergenic
TTAACACTGTTCTTGAAGTA+TGG 0.261178 1_2:-68302623 None:intergenic
AAGAAAATTACCTTGCAAAT+TGG 0.263297 1_2:+68298639 Msa0087370:CDS
TGAATATGATTGGGGTATTA+AGG 0.269904 1_2:+68299374 Msa0087370:CDS
TGCTGAACCTCATGGCATTA+AGG 0.270429 1_2:+68298353 Msa0087370:CDS
TTCTGATTATCTGGAGCTAT+TGG 0.281712 1_2:+68301545 Msa0087370:CDS
AGATCCAGTTTCTGATTATC+TGG 0.283606 1_2:+68301536 Msa0087370:CDS
AACATTATGTATGCTGAAAA+TGG 0.287707 1_2:+68302208 Msa0087370:CDS
ATTGCCTTGAAACCGTTAAT+AGG 0.291661 1_2:+68304183 Msa0087370:CDS
TTACCTTGCAAATTGGATTC+AGG 0.292125 1_2:+68298646 Msa0087370:CDS
ATTTGCGGGGAAGAGAGTTT+TGG 0.344745 1_2:+68302964 Msa0087370:CDS
AATGTTGGGGTTACAAAATT+CGG 0.349561 1_2:+68301492 Msa0087370:CDS
TGAAGGAAGAAGAAGGAGAT+TGG 0.361877 1_2:-68298251 None:intergenic
TCCATCACTGACAAGATTTA+CGG 0.365080 1_2:+68299833 Msa0087370:CDS
GATGCCATGCATGCAGTTGC+TGG 0.369833 1_2:+68301883 Msa0087370:CDS
CTGGGAATTTGTCAATTTGC+GGG 0.370284 1_2:+68302950 Msa0087370:CDS
GCTGAAAATGGACCTGATTT+CGG 0.370762 1_2:+68302220 Msa0087370:CDS
TTAGTTTGTGTCTGTGTGAT+AGG 0.374817 1_2:-68298051 None:intergenic
GTTGAACCTCCCTTTCTTTG+AGG 0.375439 1_2:+68302779 Msa0087370:CDS
TTAATACCCCAATCATATTC+AGG 0.378949 1_2:-68299372 None:intergenic
ATCTTGTCAGTGATGGATTC+TGG 0.380574 1_2:-68299827 None:intergenic
AATTTAAATATGCAGGTAGA+TGG 0.382586 1_2:+68303914 Msa0087370:intron
AATTTCAAATGGAATACCTT+TGG 0.393380 1_2:+68302049 Msa0087370:CDS
ATCAAAATTGCTGCTGGAAA+TGG 0.394303 1_2:+68298960 Msa0087370:CDS
AGCTCCAGATAATCAGAAAC+TGG 0.395255 1_2:-68301540 None:intergenic
ACGTTGACTTATCAAATGTT+GGG 0.396686 1_2:+68301478 Msa0087370:CDS
GAATTAAAGCGGACTCTTAA+CGG 0.399265 1_2:-68298288 None:intergenic
TATTAATCTCACGTTAGATT+AGG 0.401560 1_2:-68302098 None:intergenic
TTTGGGAATCTTATGGATGC+TGG 0.406165 1_2:+68302931 Msa0087370:CDS
CGGTGGTCCTGAATATGATT+GGG 0.412166 1_2:+68299365 Msa0087370:CDS
TTCGTGAGAAAGACGGAATC+TGG 0.414017 1_2:+68303004 Msa0087370:CDS
TCACTAGCAGCTCCGAAATC+AGG 0.414368 1_2:-68302232 None:intergenic
ATGTAAAATCATCTGCAAAC+TGG 0.416056 1_2:-68303792 None:intergenic
AGTGAGACATTGGAGGTTTG+AGG 0.418570 1_2:-68298204 None:intergenic
AGAAGATTGTACCTAAAATC+TGG 0.421191 1_2:-68301724 None:intergenic
GGGCGGACTATGCTCCAAAA+TGG 0.422417 1_2:-68304478 None:intergenic
ATGTAGGATTCAATTTCAAA+TGG 0.426656 1_2:+68302038 Msa0087370:intron
CCCATCTTTGTGGATAAACT+TGG 0.430041 1_2:+68301919 Msa0087370:CDS
CGCAACAAAGACACGAAACC+AGG 0.430719 1_2:+68303342 Msa0087370:CDS
AGCAAGCCCGGTGATAAGTA+TGG 0.431470 1_2:+68303668 Msa0087370:CDS
ACAAAATATACCTCAAAGAA+AGG 0.431933 1_2:-68302789 None:intergenic
ACTTGATCTCAGGTAATGAT+AGG 0.432412 1_2:-68304422 None:intergenic
TATCATCTTATTGGCCCCTT+CGG 0.437478 1_2:-68303618 None:intergenic
TGAAGTTTGAAGGAAGAAGA+AGG 0.448640 1_2:-68298258 None:intergenic
TTGAGGTTTGAGCGCAGAAA+TGG 0.450845 1_2:-68298187 None:intergenic
TCATTACCTGAGATCAAGTT+CGG 0.451519 1_2:+68304426 Msa0087370:three_prime_UTR
GACGTTGACTTATCAAATGT+TGG 0.453030 1_2:+68301477 Msa0087370:CDS
CCGGTGGTCCTGAATATGAT+TGG 0.455443 1_2:+68299364 Msa0087370:CDS
TGATGTTGTAAAGGAACATT+GGG 0.455481 1_2:+68303386 Msa0087370:CDS
ATAATAATCAAAATTGCTGC+TGG 0.456040 1_2:+68298954 Msa0087370:CDS
TTGAATTGAAAGTGAGACAT+TGG 0.456324 1_2:-68298214 None:intergenic
ATAACCTATTAACGGTTTCA+AGG 0.456835 1_2:-68304187 None:intergenic
ATACTTCAAGAACAGTGTTA+AGG 0.459497 1_2:+68302625 Msa0087370:CDS
TGATTATCTGGAGCTATTGG+AGG 0.462457 1_2:+68301548 Msa0087370:CDS
TTACAGGGAACAGGTTCTGC+TGG 0.464686 1_2:+68304093 Msa0087370:intron
TGTCCTTCAATGGGTTTGGT+AGG 0.464950 1_2:-68298454 None:intergenic
ACAGAGATCAATTTCTCCCC+TGG 0.468883 1_2:-68303360 None:intergenic
GCTGGGAATTTGTCAATTTG+CGG 0.469092 1_2:+68302949 Msa0087370:CDS
ATTCCTACCAAACCCATTGA+AGG 0.469265 1_2:+68298451 Msa0087370:CDS
TCCGTAAATCTTGTCAGTGA+TGG 0.471433 1_2:-68299834 None:intergenic
TTGGGAATCTTATGGATGCT+GGG 0.472034 1_2:+68302932 Msa0087370:CDS
TGAGGTTCAGCAATGGTTGT+AGG 0.478449 1_2:-68298342 None:intergenic
CTCTGTATCTGATGTTGTAA+AGG 0.480141 1_2:+68303377 Msa0087370:CDS
AGGTCGTGTTTAGAAACATC+TGG 0.480847 1_2:-68304150 None:intergenic
CGTGTGCTTAAACCGATCAA+TGG 0.481255 1_2:+68298137 Msa0087370:exon
CCAAGTTTATCCACAAAGAT+GGG 0.482008 1_2:-68301919 None:intergenic
ACCAAGTTTATCCACAAAGA+TGG 0.484051 1_2:-68301920 None:intergenic
CAGCCGTTTCTGCTGTGATA+AGG 0.485131 1_2:+68299211 Msa0087370:CDS
TAATCAAAGGTCTTATTTCA+CGG 0.486109 1_2:+68301701 Msa0087370:CDS
AGAAAAGAAATTTCTACCAT+AGG 0.488825 1_2:-68303412 None:intergenic
TCAGTGATGGATTCTGGTGC+AGG 0.492871 1_2:-68299821 None:intergenic
CTTTAATAGAGAAGCTGCAC+AGG 0.498615 1_2:+68298823 Msa0087370:CDS
TTACTAGGGCTGTATTAGCT+TGG 0.499141 1_2:+68303301 Msa0087370:intron
TAGGCGTAATGCACTCAACT+TGG 0.502028 1_2:-68304398 None:intergenic
CTGATGTTGTAAAGGAACAT+TGG 0.505332 1_2:+68303385 Msa0087370:CDS
GGAGATTGGAGAGTGAAGGA+AGG 0.505584 1_2:-68298237 None:intergenic
CTCTGATGATTGAATTAAAG+CGG 0.509963 1_2:-68298299 None:intergenic
TCTCACGTTAGATTAGGATC+AGG 0.510026 1_2:-68302092 None:intergenic
GAACTCTTTGAGCTTTGAAA+CGG 0.513418 1_2:-68304304 None:intergenic
AGAAGGAGATTGGAGAGTGA+AGG 0.513473 1_2:-68298241 None:intergenic
TCAAAGCTCAAAGAGTTCAC+AGG 0.520238 1_2:+68304309 Msa0087370:CDS
ACATTTGATAAGTCAACGTC+AGG 0.520308 1_2:-68301474 None:intergenic
AGCACCAGCAACTGCATGCA+TGG 0.520589 1_2:-68301887 None:intergenic
GACAAACCGAACTTGATCTC+AGG 0.527283 1_2:-68304432 None:intergenic
TGGTATCAAAACAAGGGGTC+CGG 0.530761 1_2:+68303942 Msa0087370:CDS
TATAGGAATGTGAATCCGAA+GGG 0.532495 1_2:+68303603 Msa0087370:intron
CAAAATATACCTCAAAGAAA+GGG 0.540251 1_2:-68302788 None:intergenic
AAGGAACATTGGGCAACCTA+TGG 0.541470 1_2:+68303396 Msa0087370:CDS
TGCTGTGATAAGGAAGAGGC+AGG 0.541503 1_2:+68299221 Msa0087370:CDS
CTTCCTTATCACAGCAGAAA+CGG 0.542446 1_2:-68299214 None:intergenic
TATAGGGACACTTACAGATA+GGG 0.543532 1_2:-68299861 None:intergenic
TAACTTACCATACTTATCAC+CGG 0.545382 1_2:-68303675 None:intergenic
AATTGAAAGTGAGACATTGG+AGG 0.547388 1_2:-68298211 None:intergenic
ATTGCTGCTGGAAATGGTGT+TGG 0.550223 1_2:+68298966 Msa0087370:CDS
ATCCAGTTTAATTACAGTAG+TGG 0.550227 1_2:+68299794 Msa0087370:intron
CGTTGACTTATCAAATGTTG+GGG 0.551945 1_2:+68301479 Msa0087370:CDS
CTTATCACAGCAGAAACGGC+TGG 0.555218 1_2:-68299210 None:intergenic
CTTAAACTTCAACAGGCGAA+TGG 0.562488 1_2:+68299312 Msa0087370:intron
TGTGTCTGTGTGATAGGAGT+AGG 0.562847 1_2:-68298045 None:intergenic
TGTCTGTGTAAGAGCAAGCC+CGG 0.563841 1_2:+68303656 Msa0087370:CDS
TTCCGTCTTTCTCACGAATG+TGG 0.567205 1_2:-68302999 None:intergenic
TTTATTGAACAGATATGCAA+AGG 0.567419 1_2:+68302177 Msa0087370:intron
GTGTTGGTGTTAGGAGGTGA+TGG 0.568014 1_2:+68298794 Msa0087370:CDS
GGATAAACTTGGTGCTACTC+CGG 0.568376 1_2:+68301930 Msa0087370:CDS
CCTTGGATGCAGGTGCCCAC+TGG 0.570875 1_2:+68302898 Msa0087370:intron
GTTTAATTCATTGCCGCCAG+AGG 0.572278 1_2:+68298757 Msa0087370:CDS
CAAAGCTCAAAGAGTTCACA+GGG 0.577713 1_2:+68304310 Msa0087370:CDS
TCAAGGCAATTTGAGCGTCA+AGG 0.579209 1_2:-68304170 None:intergenic
AAACCTGAATCCAATTTGCA+AGG 0.579422 1_2:-68298649 None:intergenic
TGTGACAGAAAGCCATTGAT+CGG 0.580085 1_2:-68298149 None:intergenic
ACAACCATTGCTGAACCTCA+TGG 0.580101 1_2:+68298345 Msa0087370:CDS
AACTTACCATACTTATCACC+GGG 0.580691 1_2:-68303674 None:intergenic
AATGGAGTGTTGGTGTTAGG+AGG 0.581232 1_2:+68298788 Msa0087370:CDS
GCAACAAAGACACGAAACCA+GGG 0.582127 1_2:+68303343 Msa0087370:CDS
AGCAATGGTTGTAGGAGAAG+AGG 0.585318 1_2:-68298334 None:intergenic
GTCTGTGTGATAGGAGTAGG+AGG 0.590748 1_2:-68298042 None:intergenic
CAATCATATTCAGGACCACC+GGG 0.600642 1_2:-68299363 None:intergenic
TTTCTGCTGTGATAAGGAAG+AGG 0.600742 1_2:+68299217 Msa0087370:CDS
ATATAGGAATGTGAATCCGA+AGG 0.600836 1_2:+68303602 Msa0087370:intron
CAACAAAGACACGAAACCAG+GGG 0.600910 1_2:+68303344 Msa0087370:CDS
AAACTTCAACAGGCGAATGG+TGG 0.601613 1_2:+68299315 Msa0087370:intron
CCAATCATATTCAGGACCAC+CGG 0.606027 1_2:-68299364 None:intergenic
GATTTCGGAGCTGCTAGTGA+TGG 0.607375 1_2:+68302235 Msa0087370:CDS
GGATGCAGGTGCCCACTGGT+TGG 0.610506 1_2:+68302902 Msa0087370:intron
ATCTCAGGTAATGATAGGAT+AGG 0.613607 1_2:-68304417 None:intergenic
GGAAGTGTGGTATCAAAACA+AGG 0.613768 1_2:+68303935 Msa0087370:CDS
CTGGTTTCGTGTCTTTGTTG+CGG 0.618637 1_2:-68303341 None:intergenic
CAAGTTTATCCACAAAGATG+GGG 0.618671 1_2:-68301918 None:intergenic
TAAAATCATCTGCAAACTGG+AGG 0.620007 1_2:-68303789 None:intergenic
ATGAGTGCAAGCCATAATCC+CGG 0.620791 1_2:+68299345 Msa0087370:CDS
CCATGTCCAAAATCTTCCAA+AGG 0.626695 1_2:-68302065 None:intergenic
TATGCAGGTAGATGGAAGTG+TGG 0.631620 1_2:+68303922 Msa0087370:intron
AAGTTTATCCACAAAGATGG+GGG 0.633720 1_2:-68301917 None:intergenic
GGTGGTCCTGAATATGATTG+GGG 0.636303 1_2:+68299366 Msa0087370:CDS
GACCACATTCGTGAGAAAGA+CGG 0.637403 1_2:+68302997 Msa0087370:CDS
AATATACCTCAAAGAAAGGG+AGG 0.641483 1_2:-68302785 None:intergenic
GCACGATCAATGCCGACGAG+TGG 0.650359 1_2:+68302732 Msa0087370:CDS
CTATCTAGAGCACCACTCGT+CGG 0.651595 1_2:-68302744 None:intergenic
TTATTTATTTAGTTACACAA+TGG 0.658888 1_2:-68304545 None:intergenic
ATAACCGCTACAGAGTCTGA+AGG 0.662514 1_2:-68302575 None:intergenic
TGGGAATTTGTCAATTTGCG+GGG 0.668271 1_2:+68302951 Msa0087370:CDS
AAAATTCGGAAGCTTCAGTG+TGG 0.670150 1_2:+68301506 Msa0087370:CDS
AAGTGTGGTATCAAAACAAG+GGG 0.673050 1_2:+68303937 Msa0087370:CDS
AACTCCTTCAGACTCTGTAG+CGG 0.682045 1_2:+68302571 Msa0087370:CDS
AATGCCATGAGGTTCAGCAA+TGG 0.683158 1_2:-68298349 None:intergenic
GAAGTGTGGTATCAAAACAA+GGG 0.690476 1_2:+68303936 Msa0087370:CDS
GAAAGAACCTTAATGCCATG+AGG 0.691242 1_2:-68298360 None:intergenic
AGAAAGTGTTGATCATTACA+CGG 0.697728 1_2:+68298100 Msa0087370:five_prime_UTR
ATAGGAATGTGAATCCGAAG+GGG 0.711243 1_2:+68303604 Msa0087370:intron
AGTGCAAGCCATAATCCCGG+TGG 0.744470 1_2:+68299348 Msa0087370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTAAAATTTGATTTCTA+TGG - chr1_2:68298870-68298889 None:intergenic 10.0%
!!! TTTGAAATTAATAAAACTAA+GGG - chr1_2:68300657-68300676 None:intergenic 10.0%
!!! TTTTGAAATTAATAAAACTA+AGG - chr1_2:68300658-68300677 None:intergenic 10.0%
!!! AGTTTTATTAATTTCAAAAT+TGG + chr1_2:68300659-68300678 Msa0087370:intron 10.0%
!!! GTTTTATTAATTTCAAAATT+GGG + chr1_2:68300660-68300679 Msa0087370:intron 10.0%
!!! TAATCTTGATTATTTATTTT+AGG + chr1_2:68301851-68301870 Msa0087370:intron 10.0%
!!! TTTATATGTATAATACTTTT+TGG + chr1_2:68303476-68303495 Msa0087370:intron 10.0%
!!! TTTTTGACAAATTTAAATAT+AGG + chr1_2:68303586-68303605 Msa0087370:intron 10.0%
!!! TATAATTTTTTTGAAAGAAA+TGG - chr1_2:68304034-68304053 None:intergenic 10.0%
!!! TAAATATCATATTTTACATA+GGG - chr1_2:68304501-68304520 None:intergenic 10.0%
!!! ATAAATATCATATTTTACAT+AGG - chr1_2:68304502-68304521 None:intergenic 10.0%
!! TTAAACTTATGTGAATTTAT+AGG + chr1_2:68298730-68298749 Msa0087370:intron 15.0%
!!! TACTTTTTAATTTCTAATAC+AGG + chr1_2:68299169-68299188 Msa0087370:intron 15.0%
!!! ACTTTTTAATTTCTAATACA+GGG + chr1_2:68299170-68299189 Msa0087370:intron 15.0%
!! TTAAGGAATACTTAAATATA+GGG - chr1_2:68299880-68299899 None:intergenic 15.0%
!! ATTAAGGAATACTTAAATAT+AGG - chr1_2:68299881-68299900 None:intergenic 15.0%
!! TAGTAGAATTAATTTCATAA+GGG + chr1_2:68300022-68300041 Msa0087370:intron 15.0%
!! TTATTAATATTTCTTTCATG+AGG - chr1_2:68301227-68301246 None:intergenic 15.0%
!! ACTTTATATTATGTTGATAT+TGG + chr1_2:68301995-68302014 Msa0087370:intron 15.0%
!! AGTTTATACATACTATTAAT+AGG + chr1_2:68302653-68302672 Msa0087370:intron 15.0%
!!! TAATATTTTAGATGAAGTAA+TGG + chr1_2:68302853-68302872 Msa0087370:intron 15.0%
!!! AACATTTGCTATTAAAAAAA+AGG - chr1_2:68303084-68303103 None:intergenic 15.0%
!! ATTATGATTTATATATCACT+CGG + chr1_2:68303146-68303165 Msa0087370:intron 15.0%
!! TTATTTATTTAGTTACACAA+TGG - chr1_2:68304548-68304567 None:intergenic 15.0%
!! AATCTTCAAGAAAAAAGAAA+GGG - chr1_2:68298425-68298444 None:intergenic 20.0%
!! TAATCTTCAAGAAAAAAGAA+AGG - chr1_2:68298426-68298445 None:intergenic 20.0%
!!! ACTATATTTGTTTGTTTTGT+AGG + chr1_2:68298601-68298620 Msa0087370:intron 20.0%
!! ATATGAGAAGAAAGTAAATA+AGG - chr1_2:68299989-68300008 None:intergenic 20.0%
!! GTAGTAGAATTAATTTCATA+AGG + chr1_2:68300021-68300040 Msa0087370:intron 20.0%
!! TTTCTATTAGTAGATATTCA+AGG - chr1_2:68300063-68300082 None:intergenic 20.0%
!! GAATATCTACTAATAGAAAA+TGG + chr1_2:68300064-68300083 Msa0087370:intron 20.0%
!! TAAACTTTATGCTATCTTAA+TGG - chr1_2:68300100-68300119 None:intergenic 20.0%
!!! TTATTACAAAAAGTACAAGT+TGG - chr1_2:68300137-68300156 None:intergenic 20.0%
!!! ATTACCATGAAACAATTTTA+GGG - chr1_2:68300270-68300289 None:intergenic 20.0%
!!! GAGATTTTGCAAAAATTTAA+AGG - chr1_2:68300378-68300397 None:intergenic 20.0%
!! GATATTACAGAACATAATTA+AGG + chr1_2:68300518-68300537 Msa0087370:intron 20.0%
!! ATAAATTATTTCATCACAAG+AGG + chr1_2:68300835-68300854 Msa0087370:intron 20.0%
!! TATAATAACAATAAGCAATG+TGG - chr1_2:68301027-68301046 None:intergenic 20.0%
!!! ACATTGCTTATTGTTATTAT+AGG + chr1_2:68301026-68301045 Msa0087370:intron 20.0%
!!! CTAAGTGTTATTTTTATCAA+AGG - chr1_2:68301138-68301157 None:intergenic 20.0%
!!! TATTGCAAATTTTGACTTTA+CGG + chr1_2:68301758-68301777 Msa0087370:intron 20.0%
!! CAAATACATAAAAATCATCA+AGG - chr1_2:68302495-68302514 None:intergenic 20.0%
!!! ACTTCATCTAAAATATTAAG+CGG - chr1_2:68302851-68302870 None:intergenic 20.0%
!!! GCTATTAAAAAAAAGGTATA+CGG - chr1_2:68303077-68303096 None:intergenic 20.0%
!! TACAATTACTAGTTATGTTA+CGG + chr1_2:68303106-68303125 Msa0087370:intron 20.0%
!!! TATTTAGTTTAGTTTTGCTT+TGG + chr1_2:68303507-68303526 Msa0087370:intron 20.0%
!!! ATATTTTTCTTTTCAACTCA+AGG + chr1_2:68303862-68303881 Msa0087370:intron 20.0%
!!! TTAAATCAGATTTTGAACTA+CGG - chr1_2:68303896-68303915 None:intergenic 20.0%
!!! CTGATTTAATTTAAATATGC+AGG + chr1_2:68303907-68303926 Msa0087370:intron 20.0%
!! TATATTACTATACGTTATCT+TGG - chr1_2:68304223-68304242 None:intergenic 20.0%
! TTCACCATTATATTAGTGAT+GGG + chr1_2:68298551-68298570 Msa0087370:intron 25.0%
! AAGAAAATTACCTTGCAAAT+TGG + chr1_2:68298639-68298658 Msa0087370:CDS 25.0%
! ATAATAATCAAAATTGCTGC+TGG + chr1_2:68298954-68298973 Msa0087370:CDS 25.0%
! CTTGTTAATTGTTACAAGAA+AGG + chr1_2:68299033-68299052 Msa0087370:intron 25.0%
! TAATTGTTACAAGAAAGGAT+AGG + chr1_2:68299038-68299057 Msa0087370:intron 25.0%
!! TTTAATTTCTAATACAGGGA+AGG + chr1_2:68299174-68299193 Msa0087370:intron 25.0%
! TTAATTTCTAATACAGGGAA+GGG + chr1_2:68299175-68299194 Msa0087370:intron 25.0%
! AATACTATGCTAAGGAAAAA+AGG - chr1_2:68299262-68299281 None:intergenic 25.0%
!! TCATTTTCTTAAACTTCAAC+AGG + chr1_2:68299305-68299324 Msa0087370:intron 25.0%
!! ATTAGTTCTCATCCATTTAA+AGG + chr1_2:68299408-68299427 Msa0087370:intron 25.0%
! TCGGTATTTATTATGCATAT+GGG - chr1_2:68299661-68299680 None:intergenic 25.0%
! ATCGGTATTTATTATGCATA+TGG - chr1_2:68299662-68299681 None:intergenic 25.0%
!! AAAGCTATGTATTGACAAAT+CGG - chr1_2:68299680-68299699 None:intergenic 25.0%
! TTAGTAGATATTCAAGGAAA+TGG - chr1_2:68300057-68300076 None:intergenic 25.0%
!! CATTACCATGAAACAATTTT+AGG - chr1_2:68300271-68300290 None:intergenic 25.0%
! AAATGACAAATCATCATAAG+TGG - chr1_2:68300326-68300345 None:intergenic 25.0%
!! TTTTGCAAAAATTTAAAGGC+AGG - chr1_2:68300374-68300393 None:intergenic 25.0%
! ATTCTTCATGTTAGAAGTTA+CGG - chr1_2:68300629-68300648 None:intergenic 25.0%
! TTAATTTCAAAATTGGGTCT+AGG + chr1_2:68300666-68300685 Msa0087370:intron 25.0%
! ATTTATCGATATTGAAAAGC+TGG + chr1_2:68300769-68300788 Msa0087370:intron 25.0%
! CTAATAAAACATTTCCATTC+AGG + chr1_2:68300886-68300905 Msa0087370:intron 25.0%
! TTTCAACATAATCAGATGAT+CGG - chr1_2:68300923-68300942 None:intergenic 25.0%
!!! ATCATGTTTTAAAACTTGGT+AGG - chr1_2:68300986-68301005 None:intergenic 25.0%
!!! ACGAATCATGTTTTAAAACT+TGG - chr1_2:68300990-68301009 None:intergenic 25.0%
!!! AGGTTTTTTCATTCAACATA+TGG - chr1_2:68301207-68301226 None:intergenic 25.0%
! TTAATTGTCCAAAAAAAACC+AGG - chr1_2:68301329-68301348 None:intergenic 25.0%
! TTATTTGTCAAAGAAACTGT+AGG - chr1_2:68301358-68301377 None:intergenic 25.0%
! TACAGTTTCTTTGACAAATA+AGG + chr1_2:68301357-68301376 Msa0087370:intron 25.0%
! CAATAACAAATAAACTGAAC+TGG - chr1_2:68301650-68301669 None:intergenic 25.0%
!!! TTTGATTTTCAGCTAATCAA+AGG + chr1_2:68301688-68301707 Msa0087370:CDS 25.0%
!!! TAATCAAAGGTCTTATTTCA+CGG + chr1_2:68301701-68301720 Msa0087370:CDS 25.0%
!!! ATTGCAAATTTTGACTTTAC+GGG + chr1_2:68301759-68301778 Msa0087370:intron 25.0%
! ATGTAGGATTCAATTTCAAA+TGG + chr1_2:68302038-68302057 Msa0087370:intron 25.0%
! AATTTCAAATGGAATACCTT+TGG + chr1_2:68302049-68302068 Msa0087370:CDS 25.0%
! TATTAATCTCACGTTAGATT+AGG - chr1_2:68302101-68302120 None:intergenic 25.0%
! TTTATTGAACAGATATGCAA+AGG + chr1_2:68302177-68302196 Msa0087370:intron 25.0%
! AACATTATGTATGCTGAAAA+TGG + chr1_2:68302208-68302227 Msa0087370:CDS 25.0%
!!! CAACTACATCTTCTAAAATA+TGG - chr1_2:68302430-68302449 None:intergenic 25.0%
!! ATGTATTTGAACTTTTGTTC+AGG + chr1_2:68302506-68302525 Msa0087370:intron 25.0%
! CAAAATATACCTCAAAGAAA+GGG - chr1_2:68302791-68302810 None:intergenic 25.0%
! ACAAAATATACCTCAAAGAA+AGG - chr1_2:68302792-68302811 None:intergenic 25.0%
!! CTTCATCTAAAATATTAAGC+GGG - chr1_2:68302850-68302869 None:intergenic 25.0%
!!! GAAATTTTTTGGGAATCTTA+TGG + chr1_2:68302924-68302943 Msa0087370:CDS 25.0%
! ACAATTACTAGTTATGTTAC+GGG + chr1_2:68303107-68303126 Msa0087370:intron 25.0%
! TTGTTTGTTTCCAATTACTA+GGG + chr1_2:68303287-68303306 Msa0087370:intron 25.0%
! AGAAAAGAAATTTCTACCAT+AGG - chr1_2:68303415-68303434 None:intergenic 25.0%
! ATTTCTTAATACCATAAGCT+AGG + chr1_2:68303531-68303550 Msa0087370:intron 25.0%
! TAGATACTCTATCATCTTAT+TGG - chr1_2:68303630-68303649 None:intergenic 25.0%
! AAGAAAAATATGAACGTGAT+AGG - chr1_2:68303853-68303872 None:intergenic 25.0%
! AATTTAAATATGCAGGTAGA+TGG + chr1_2:68303914-68303933 Msa0087370:intron 25.0%
! CACGAAAAATAACCTATTAA+CGG - chr1_2:68304198-68304217 None:intergenic 25.0%
!!! TTTTGGTTGTTTTACCATTT+TGG + chr1_2:68304464-68304483 Msa0087370:three_prime_UTR 25.0%
!! ATATCATATTTTACATAGGG+CGG - chr1_2:68304498-68304517 None:intergenic 25.0%
!! ATATTTAGCTTCTCTGTAAA+AGG + chr1_2:68304583-68304602 Msa0087370:three_prime_UTR 25.0%
!! AGAAAGTGTTGATCATTACA+CGG + chr1_2:68298100-68298119 Msa0087370:five_prime_UTR 30.0%
TTGAATTGAAAGTGAGACAT+TGG - chr1_2:68298217-68298236 None:intergenic 30.0%
CTCTGATGATTGAATTAAAG+CGG - chr1_2:68298302-68298321 None:intergenic 30.0%
GTTCACCATTATATTAGTGA+TGG + chr1_2:68298550-68298569 Msa0087370:intron 30.0%
ATAGCCCATCACTAATATAA+TGG - chr1_2:68298558-68298577 None:intergenic 30.0%
! AAATGGTGTTGGAAAAATTC+TGG + chr1_2:68298977-68298996 Msa0087370:CDS 30.0%
TTGCTGAAAATACTATGCTA+AGG - chr1_2:68299270-68299289 None:intergenic 30.0%
TTAATACCCCAATCATATTC+AGG - chr1_2:68299375-68299394 None:intergenic 30.0%
! TGAATATGATTGGGGTATTA+AGG + chr1_2:68299374-68299393 Msa0087370:CDS 30.0%
ATTGATCCATGACCTTTAAA+TGG - chr1_2:68299423-68299442 None:intergenic 30.0%
AATAAAACCAAGCAACTTCA+GGG - chr1_2:68299477-68299496 None:intergenic 30.0%
TAATAAAACCAAGCAACTTC+AGG - chr1_2:68299478-68299497 None:intergenic 30.0%
!!! TTGCTTGGTTTTATTAGCTT+TGG + chr1_2:68299482-68299501 Msa0087370:intron 30.0%
!!! TGGTTTTATTAGCTTTGGTT+AGG + chr1_2:68299487-68299506 Msa0087370:intron 30.0%
! ACTGAATCGAAAACTTTTCA+AGG - chr1_2:68299526-68299545 None:intergenic 30.0%
ATCCAGTTTAATTACAGTAG+TGG + chr1_2:68299794-68299813 Msa0087370:intron 30.0%
ACTGAAGGATTGGAATATTA+AGG - chr1_2:68299897-68299916 None:intergenic 30.0%
! TATTGCAGTGTACTAGATTT+TGG - chr1_2:68300181-68300200 None:intergenic 30.0%
AGATCCCTAAAATTGTTTCA+TGG + chr1_2:68300263-68300282 Msa0087370:intron 30.0%
! GAGTACAAAGAATGACTTTT+GGG - chr1_2:68300294-68300313 None:intergenic 30.0%
! AGAGTACAAAGAATGACTTT+TGG - chr1_2:68300295-68300314 None:intergenic 30.0%
! GATTTGTCATTTACACTTTG+TGG + chr1_2:68300334-68300353 Msa0087370:intron 30.0%
CAAATTAACAATGCTCCTAA+AGG + chr1_2:68300578-68300597 Msa0087370:intron 30.0%
TTCTTCATGTTAGAAGTTAC+GGG - chr1_2:68300628-68300647 None:intergenic 30.0%
AAAATTGGGTCTAGGTATAT+TGG + chr1_2:68300674-68300693 Msa0087370:intron 30.0%
!! GAGTAACATTGTTGTTTATC+TGG + chr1_2:68300718-68300737 Msa0087370:intron 30.0%
AGAGAATACTAGTATAGAGA+TGG - chr1_2:68300813-68300832 None:intergenic 30.0%
GATCATCTGATTATGTTGAA+AGG + chr1_2:68300922-68300941 Msa0087370:intron 30.0%
!!! GACTTGTTCTTTTAGAATGT+AGG + chr1_2:68301048-68301067 Msa0087370:intron 30.0%
! AGTTTTTATCCCCTTTAAAC+AGG + chr1_2:68301178-68301197 Msa0087370:intron 30.0%
! GTTTTTATCCCCTTTAAACA+GGG + chr1_2:68301179-68301198 Msa0087370:intron 30.0%
AATCCATATAAATCCCTACA+TGG + chr1_2:68301245-68301264 Msa0087370:intron 30.0%
TTACCATGTAGGGATTTATA+TGG - chr1_2:68301251-68301270 None:intergenic 30.0%
!! AGTTTTGTCCTGGTTTTTTT+TGG + chr1_2:68301318-68301337 Msa0087370:intron 30.0%
!! ACGTTGACTTATCAAATGTT+GGG + chr1_2:68301478-68301497 Msa0087370:CDS 30.0%
AATGTTGGGGTTACAAAATT+CGG + chr1_2:68301492-68301511 Msa0087370:CDS 30.0%
AGAAGATTGTACCTAAAATC+TGG - chr1_2:68301727-68301746 None:intergenic 30.0%
!!! TTGCAAATTTTGACTTTACG+GGG + chr1_2:68301760-68301779 Msa0087370:intron 30.0%
! ATCACTTTGTTTAAACAGAG+TGG + chr1_2:68301805-68301824 Msa0087370:intron 30.0%
! TCACTTTGTTTAAACAGAGT+GGG + chr1_2:68301806-68301825 Msa0087370:intron 30.0%
TGAAACTAATCATCAGTTCA+GGG - chr1_2:68302331-68302350 None:intergenic 30.0%
ATGAAACTAATCATCAGTTC+AGG - chr1_2:68302332-68302351 None:intergenic 30.0%
ATCATCAAGGAAACACATAA+AGG - chr1_2:68302482-68302501 None:intergenic 30.0%
! GGGGATAGAAATATGATTTT+AGG + chr1_2:68302533-68302552 Msa0087370:CDS 30.0%
TTAACACTGTTCTTGAAGTA+TGG - chr1_2:68302626-68302645 None:intergenic 30.0%
ATACTTCAAGAACAGTGTTA+AGG + chr1_2:68302625-68302644 Msa0087370:CDS 30.0%
!! TTATGCTTTGAAGAAACATG+TGG - chr1_2:68303038-68303057 None:intergenic 30.0%
GTTGTTTGTTTCCAATTACT+AGG + chr1_2:68303286-68303305 Msa0087370:intron 30.0%
TGATGTTGTAAAGGAACATT+GGG + chr1_2:68303386-68303405 Msa0087370:CDS 30.0%
TATACACTTAACCTAGCTTA+TGG - chr1_2:68303545-68303564 None:intergenic 30.0%
TAACTTACCATACTTATCAC+CGG - chr1_2:68303678-68303697 None:intergenic 30.0%
ATCATACTTCAAATATGCTC+AGG - chr1_2:68303743-68303762 None:intergenic 30.0%
TATGATGAGTATTCTTCTAC+AGG + chr1_2:68303757-68303776 Msa0087370:intron 30.0%
ATGTAAAATCATCTGCAAAC+TGG - chr1_2:68303795-68303814 None:intergenic 30.0%
!!! TGTACGATGTTTTGTTTTAC+AGG + chr1_2:68304077-68304096 Msa0087370:intron 30.0%
!!! GTACGATGTTTTGTTTTACA+GGG + chr1_2:68304078-68304097 Msa0087370:intron 30.0%
ATAACCTATTAACGGTTTCA+AGG - chr1_2:68304190-68304209 None:intergenic 30.0%
!!! CATTTTTAAGTGATGACTGT+AGG - chr1_2:68304345-68304364 None:intergenic 30.0%
!! TACATTTTGATGAGTGATTG+TGG - chr1_2:68304376-68304395 None:intergenic 30.0%
!!! GGTTTGTCATTTTTCAGTTT+TGG + chr1_2:68304447-68304466 Msa0087370:three_prime_UTR 30.0%
!! TTAGTTTGTGTCTGTGTGAT+AGG - chr1_2:68298054-68298073 None:intergenic 35.0%
AATTGAAAGTGAGACATTGG+AGG - chr1_2:68298214-68298233 None:intergenic 35.0%
TGAAGTTTGAAGGAAGAAGA+AGG - chr1_2:68298261-68298280 None:intergenic 35.0%
! GAATTAAAGCGGACTCTTAA+CGG - chr1_2:68298291-68298310 None:intergenic 35.0%
!! TTTTTGTCCTTCAATGGGTT+TGG - chr1_2:68298461-68298480 None:intergenic 35.0%
!!! CCAGTTTTTTGTCCTTCAAT+GGG - chr1_2:68298466-68298485 None:intergenic 35.0%
!!! ACCAGTTTTTTGTCCTTCAA+TGG - chr1_2:68298467-68298486 None:intergenic 35.0%
GACAAAAAACTGGTACAAGT+GGG + chr1_2:68298473-68298492 Msa0087370:CDS 35.0%
TTACCTTGCAAATTGGATTC+AGG + chr1_2:68298646-68298665 Msa0087370:CDS 35.0%
AAACCTGAATCCAATTTGCA+AGG - chr1_2:68298652-68298671 None:intergenic 35.0%
!! ACTCCATTTTTGTAATCCTC+TGG - chr1_2:68298776-68298795 None:intergenic 35.0%
GGATTACAAAAATGGAGTGT+TGG + chr1_2:68298778-68298797 Msa0087370:CDS 35.0%
!! AAAAATGGAGTGTTGGTGTT+AGG + chr1_2:68298785-68298804 Msa0087370:CDS 35.0%
CTATGGTGACACATTCAAAA+AGG - chr1_2:68298853-68298872 None:intergenic 35.0%
ATCAAAATTGCTGCTGGAAA+TGG + chr1_2:68298960-68298979 Msa0087370:CDS 35.0%
ACATGAATCAAGAGCTAGTA+AGG + chr1_2:68299065-68299084 Msa0087370:intron 35.0%
CATGAATCAAGAGCTAGTAA+GGG + chr1_2:68299066-68299085 Msa0087370:intron 35.0%
GATTGGATAAACATCTGTCT+TGG + chr1_2:68299092-68299111 Msa0087370:intron 35.0%
TGCTAAGGAAAAAAGGAGTA+TGG - chr1_2:68299255-68299274 None:intergenic 35.0%
TCTCATCCATTTAAAGGTCA+TGG + chr1_2:68299414-68299433 Msa0087370:intron 35.0%
!! ATTAGCTTTGGTTAGGACAT+TGG + chr1_2:68299494-68299513 Msa0087370:intron 35.0%
! TTTTTGTCGATGTATCGCTA+AGG + chr1_2:68299557-68299576 Msa0087370:intron 35.0%
! TTGTTATTGATGCATCGCTA+GGG + chr1_2:68299617-68299636 Msa0087370:intron 35.0%
GTCCACTACTGTAATTAAAC+TGG - chr1_2:68299799-68299818 None:intergenic 35.0%
TCCATCACTGACAAGATTTA+CGG + chr1_2:68299833-68299852 Msa0087370:CDS 35.0%
TATAGGGACACTTACAGATA+GGG - chr1_2:68299864-68299883 None:intergenic 35.0%
ATATAGGGACACTTACAGAT+AGG - chr1_2:68299865-68299884 None:intergenic 35.0%
TGTGCAAGTCAAACATTTCA+AGG - chr1_2:68299925-68299944 None:intergenic 35.0%
CAATATTTCATCCTCCAACA+AGG - chr1_2:68299955-68299974 None:intergenic 35.0%
TTCTCTCTCTTTCTTTGTCT+TGG + chr1_2:68300428-68300447 Msa0087370:intron 35.0%
TGTTCAAGTGGATAACCTTT+AGG - chr1_2:68300596-68300615 None:intergenic 35.0%
GAATACTAGTATAGAGATGG+AGG - chr1_2:68300810-68300829 None:intergenic 35.0%
CGGCTAAAAAAATACCTGAA+TGG - chr1_2:68300903-68300922 None:intergenic 35.0%
GGTAGGATGATATATGCAAA+AGG - chr1_2:68300969-68300988 None:intergenic 35.0%
TTTATCAAAGGTTGTGCTTG+AGG - chr1_2:68301126-68301145 None:intergenic 35.0%
ATATGGTTCCCTGTTTAAAG+GGG - chr1_2:68301190-68301209 None:intergenic 35.0%
CATATGGTTCCCTGTTTAAA+GGG - chr1_2:68301191-68301210 None:intergenic 35.0%
ACATATGGTTCCCTGTTTAA+AGG - chr1_2:68301192-68301211 None:intergenic 35.0%
TTCCTGACTATTACCATGTA+GGG - chr1_2:68301261-68301280 None:intergenic 35.0%
TTTCCTGACTATTACCATGT+AGG - chr1_2:68301262-68301281 None:intergenic 35.0%
!! TGGATTTGTTGATTACTCGT+AGG - chr1_2:68301288-68301307 None:intergenic 35.0%
ATCTCAGAAATCTGTGTCAA+CGG - chr1_2:68301438-68301457 None:intergenic 35.0%
ACATTTGATAAGTCAACGTC+AGG - chr1_2:68301477-68301496 None:intergenic 35.0%
!! GACGTTGACTTATCAAATGT+TGG + chr1_2:68301477-68301496 Msa0087370:CDS 35.0%
!! CGTTGACTTATCAAATGTTG+GGG + chr1_2:68301479-68301498 Msa0087370:CDS 35.0%
AGATCCAGTTTCTGATTATC+TGG + chr1_2:68301536-68301555 Msa0087370:CDS 35.0%
! TTCTGATTATCTGGAGCTAT+TGG + chr1_2:68301545-68301564 Msa0087370:CDS 35.0%
! TTATTTCACGGCCAGATTTT+AGG + chr1_2:68301713-68301732 Msa0087370:CDS 35.0%
! CACTTTGTTTAAACAGAGTG+GGG + chr1_2:68301807-68301826 Msa0087370:intron 35.0%
AAGTTTATCCACAAAGATGG+GGG - chr1_2:68301920-68301939 None:intergenic 35.0%
CAAGTTTATCCACAAAGATG+GGG - chr1_2:68301921-68301940 None:intergenic 35.0%
CCAAGTTTATCCACAAAGAT+GGG - chr1_2:68301922-68301941 None:intergenic 35.0%
ACCAAGTTTATCCACAAAGA+TGG - chr1_2:68301923-68301942 None:intergenic 35.0%
ACTCCCTAAATGAGTTAAAG+GGG - chr1_2:68301966-68301985 None:intergenic 35.0%
CACTCCCTAAATGAGTTAAA+GGG - chr1_2:68301967-68301986 None:intergenic 35.0%
TGATGTCAAGTATGCAATGT+AGG + chr1_2:68302022-68302041 Msa0087370:intron 35.0%
!! GGAATACCTTTGGAAGATTT+TGG + chr1_2:68302059-68302078 Msa0087370:CDS 35.0%
GAAACTAATCATCAGTTCAG+GGG - chr1_2:68302330-68302349 None:intergenic 35.0%
! TTGAACTTTTGTTCAGGTGA+CGG + chr1_2:68302512-68302531 Msa0087370:intron 35.0%
TTGTTCTGTATTGCAATTGC+AGG + chr1_2:68302704-68302723 Msa0087370:intron 35.0%
TGTTCTGTATTGCAATTGCA+GGG + chr1_2:68302705-68302724 Msa0087370:intron 35.0%
AATATACCTCAAAGAAAGGG+AGG - chr1_2:68302788-68302807 None:intergenic 35.0%
AAATGACAAAAGACGAACCT+TGG + chr1_2:68302881-68302900 Msa0087370:intron 35.0%
CCAAAAAATTTCCAACCAGT+GGG - chr1_2:68302916-68302935 None:intergenic 35.0%
!!! CCACTGGTTGGAAATTTTTT+GGG + chr1_2:68302914-68302933 Msa0087370:CDS 35.0%
AAGGTATACGGAAACACAAT+AGG - chr1_2:68303065-68303084 None:intergenic 35.0%
ATTACTAGTTATGTTACGGG+TGG + chr1_2:68303110-68303129 Msa0087370:intron 35.0%
TTACTAGTTATGTTACGGGT+GGG + chr1_2:68303111-68303130 Msa0087370:intron 35.0%
GTTCACAAAACTTATGCTTG+TGG - chr1_2:68303234-68303253 None:intergenic 35.0%
CTCTGTATCTGATGTTGTAA+AGG + chr1_2:68303377-68303396 Msa0087370:CDS 35.0%
CTGATGTTGTAAAGGAACAT+TGG + chr1_2:68303385-68303404 Msa0087370:CDS 35.0%
! CTTTTCTAGATATGACTACG+AGG + chr1_2:68303428-68303447 Msa0087370:CDS 35.0%
ATATAGGAATGTGAATCCGA+AGG + chr1_2:68303602-68303621 Msa0087370:intron 35.0%
TATAGGAATGTGAATCCGAA+GGG + chr1_2:68303603-68303622 Msa0087370:intron 35.0%
AACTTACCATACTTATCACC+GGG - chr1_2:68303677-68303696 None:intergenic 35.0%
TAAAATCATCTGCAAACTGG+AGG - chr1_2:68303792-68303811 None:intergenic 35.0%
GAAGTGTGGTATCAAAACAA+GGG + chr1_2:68303936-68303955 Msa0087370:CDS 35.0%
AAGTGTGGTATCAAAACAAG+GGG + chr1_2:68303937-68303956 Msa0087370:CDS 35.0%
AACCATCCGTAAAAACAAAC+CGG - chr1_2:68303964-68303983 None:intergenic 35.0%
!!! TTGTTTTTACGGATGGTTCA+AGG + chr1_2:68303966-68303985 Msa0087370:CDS 35.0%
!!! TGTTTTGTTTTACAGGGAAC+AGG + chr1_2:68304084-68304103 Msa0087370:intron 35.0%
ATTGCCTTGAAACCGTTAAT+AGG + chr1_2:68304183-68304202 Msa0087370:CDS 35.0%
!! GAACTCTTTGAGCTTTGAAA+CGG - chr1_2:68304307-68304326 None:intergenic 35.0%
ATCTCAGGTAATGATAGGAT+AGG - chr1_2:68304420-68304439 None:intergenic 35.0%
ACTTGATCTCAGGTAATGAT+AGG - chr1_2:68304425-68304444 None:intergenic 35.0%
TCATTACCTGAGATCAAGTT+CGG + chr1_2:68304426-68304445 Msa0087370:three_prime_UTR 35.0%
TGTGACAGAAAGCCATTGAT+CGG - chr1_2:68298152-68298171 None:intergenic 40.0%
TGAAGGAAGAAGAAGGAGAT+TGG - chr1_2:68298254-68298273 None:intergenic 40.0%
!!! CGGAGAGTTTTGAAGTTTGA+AGG - chr1_2:68298271-68298290 None:intergenic 40.0%
GAAAGAACCTTAATGCCATG+AGG - chr1_2:68298363-68298382 None:intergenic 40.0%
ATTCCTACCAAACCCATTGA+AGG + chr1_2:68298451-68298470 Msa0087370:CDS 40.0%
CCCATTGAAGGACAAAAAAC+TGG + chr1_2:68298463-68298482 Msa0087370:CDS 40.0%
GGACAAAAAACTGGTACAAG+TGG + chr1_2:68298472-68298491 Msa0087370:CDS 40.0%
!! TACAAGTGGGCTACGAAAAA+AGG + chr1_2:68298486-68298505 Msa0087370:CDS 40.0%
!! CCATTTTTGTAATCCTCTGG+CGG - chr1_2:68298773-68298792 None:intergenic 40.0%
CTTTAATAGAGAAGCTGCAC+AGG + chr1_2:68298823-68298842 Msa0087370:CDS 40.0%
! GGTGTTGGAAAAATTCTGGT+TGG + chr1_2:68298981-68299000 Msa0087370:CDS 40.0%
AATCAAGAGCTAGTAAGGGA+TGG + chr1_2:68299070-68299089 Msa0087370:intron 40.0%
CTTCCTTATCACAGCAGAAA+CGG - chr1_2:68299217-68299236 None:intergenic 40.0%
TTTCTGCTGTGATAAGGAAG+AGG + chr1_2:68299217-68299236 Msa0087370:CDS 40.0%
CTTAAACTTCAACAGGCGAA+TGG + chr1_2:68299312-68299331 Msa0087370:intron 40.0%
! AAGCCTTTTGCCACTAAGTA+GGG - chr1_2:68299583-68299602 None:intergenic 40.0%
! GTTGTTATTGATGCATCGCT+AGG + chr1_2:68299616-68299635 Msa0087370:intron 40.0%
TGTTATTGATGCATCGCTAG+GGG + chr1_2:68299618-68299637 Msa0087370:intron 40.0%
ACATAACACACACTAGAGTC+TGG - chr1_2:68299729-68299748 None:intergenic 40.0%
!! ATCTTGTCAGTGATGGATTC+TGG - chr1_2:68299830-68299849 None:intergenic 40.0%
TCCGTAAATCTTGTCAGTGA+TGG - chr1_2:68299837-68299856 None:intergenic 40.0%
CATTTCAAGGAACAGACTGA+AGG - chr1_2:68299912-68299931 None:intergenic 40.0%
!!! CAGTGTACTAGATTTTGGCT+AGG - chr1_2:68300176-68300195 None:intergenic 40.0%
TCATTTACACTTTGTGGCGA+GGG + chr1_2:68300340-68300359 Msa0087370:intron 40.0%
!!! GGAATTTTTTCCCTCTCTAG+AGG + chr1_2:68300449-68300468 Msa0087370:intron 40.0%
!! TTTTCCCTCTCTAGAGGTAT+CGG + chr1_2:68300455-68300474 Msa0087370:intron 40.0%
GGTTATCCACTTGAACATTC+AGG + chr1_2:68300599-68300618 Msa0087370:intron 40.0%
ATCCCTACATGGTAATAGTC+AGG + chr1_2:68301256-68301275 Msa0087370:intron 40.0%
GGACAAAACTTTGTGTGCAA+TGG - chr1_2:68301308-68301327 None:intergenic 40.0%
!! TTGCACACAAAGTTTTGTCC+TGG + chr1_2:68301308-68301327 Msa0087370:intron 40.0%
AAAATTCGGAAGCTTCAGTG+TGG + chr1_2:68301506-68301525 Msa0087370:CDS 40.0%
AGCTCCAGATAATCAGAAAC+TGG - chr1_2:68301543-68301562 None:intergenic 40.0%
! TGATTATCTGGAGCTATTGG+AGG + chr1_2:68301548-68301567 Msa0087370:CDS 40.0%
CCCATCTTTGTGGATAAACT+TGG + chr1_2:68301919-68301938 Msa0087370:CDS 40.0%
TCTCCCCCTTTAACTCATTT+AGG + chr1_2:68301959-68301978 Msa0087370:intron 40.0%
CTCCCCCTTTAACTCATTTA+GGG + chr1_2:68301960-68301979 Msa0087370:intron 40.0%
CTCCCTAAATGAGTTAAAGG+GGG - chr1_2:68301965-68301984 None:intergenic 40.0%
CCACTCCCTAAATGAGTTAA+AGG - chr1_2:68301968-68301987 None:intergenic 40.0%
CCTTTAACTCATTTAGGGAG+TGG + chr1_2:68301965-68301984 Msa0087370:intron 40.0%
CCATGTCCAAAATCTTCCAA+AGG - chr1_2:68302068-68302087 None:intergenic 40.0%
!! CCTTTGGAAGATTTTGGACA+TGG + chr1_2:68302065-68302084 Msa0087370:CDS 40.0%
TCTCACGTTAGATTAGGATC+AGG - chr1_2:68302095-68302114 None:intergenic 40.0%
GCTGAAAATGGACCTGATTT+CGG + chr1_2:68302220-68302239 Msa0087370:CDS 40.0%
AAACCAAAGATGTGCAAGCT+GGG - chr1_2:68302274-68302293 None:intergenic 40.0%
TAAACCAAAGATGTGCAAGC+TGG - chr1_2:68302275-68302294 None:intergenic 40.0%
! TGAACTTTTGTTCAGGTGAC+GGG + chr1_2:68302513-68302532 Msa0087370:intron 40.0%
! TGGAATCGCTTCTTTTGCAT+TGG - chr1_2:68302606-68302625 None:intergenic 40.0%
!!! CCCACTGGTTGGAAATTTTT+TGG + chr1_2:68302913-68302932 Msa0087370:CDS 40.0%
CCCAAAAAATTTCCAACCAG+TGG - chr1_2:68302917-68302936 None:intergenic 40.0%
TTTGGGAATCTTATGGATGC+TGG + chr1_2:68302931-68302950 Msa0087370:CDS 40.0%
TTGGGAATCTTATGGATGCT+GGG + chr1_2:68302932-68302951 Msa0087370:CDS 40.0%
GCTGGGAATTTGTCAATTTG+CGG + chr1_2:68302949-68302968 Msa0087370:CDS 40.0%
CTGGGAATTTGTCAATTTGC+GGG + chr1_2:68302950-68302969 Msa0087370:CDS 40.0%
TGGGAATTTGTCAATTTGCG+GGG + chr1_2:68302951-68302970 Msa0087370:CDS 40.0%
TACTAGTTATGTTACGGGTG+GGG + chr1_2:68303112-68303131 Msa0087370:intron 40.0%
ACAACCTTGTAAAGGAGATG+AGG + chr1_2:68303169-68303188 Msa0087370:intron 40.0%
GCTAATACAGCCCTAGTAAT+TGG - chr1_2:68303300-68303319 None:intergenic 40.0%
TTACTAGGGCTGTATTAGCT+TGG + chr1_2:68303301-68303320 Msa0087370:intron 40.0%
TCTAGATATGACTACGAGGT+TGG + chr1_2:68303432-68303451 Msa0087370:intron 40.0%
ATAGGAATGTGAATCCGAAG+GGG + chr1_2:68303604-68303623 Msa0087370:intron 40.0%
TATCATCTTATTGGCCCCTT+CGG - chr1_2:68303621-68303640 None:intergenic 40.0%
TGCACATTGCAAGAACTTAC+AGG - chr1_2:68303826-68303845 None:intergenic 40.0%
! GGAAGTGTGGTATCAAAACA+AGG + chr1_2:68303935-68303954 Msa0087370:CDS 40.0%
AGGTCGTGTTTAGAAACATC+TGG - chr1_2:68304153-68304172 None:intergenic 40.0%
TCAAAGCTCAAAGAGTTCAC+AGG + chr1_2:68304309-68304328 Msa0087370:CDS 40.0%
CAAAGCTCAAAGAGTTCACA+GGG + chr1_2:68304310-68304329 Msa0087370:CDS 40.0%
TGTGTCTGTGTGATAGGAGT+AGG - chr1_2:68298048-68298067 None:intergenic 45.0%
CGTGTGCTTAAACCGATCAA+TGG + chr1_2:68298137-68298156 Msa0087370:exon 45.0%
TTGAGGTTTGAGCGCAGAAA+TGG - chr1_2:68298190-68298209 None:intergenic 45.0%
AGTGAGACATTGGAGGTTTG+AGG - chr1_2:68298207-68298226 None:intergenic 45.0%
AGAAGGAGATTGGAGAGTGA+AGG - chr1_2:68298244-68298263 None:intergenic 45.0%
AGCAATGGTTGTAGGAGAAG+AGG - chr1_2:68298337-68298356 None:intergenic 45.0%
TGAGGTTCAGCAATGGTTGT+AGG - chr1_2:68298345-68298364 None:intergenic 45.0%
ACAACCATTGCTGAACCTCA+TGG + chr1_2:68298345-68298364 Msa0087370:CDS 45.0%
AATGCCATGAGGTTCAGCAA+TGG - chr1_2:68298352-68298371 None:intergenic 45.0%
TGCTGAACCTCATGGCATTA+AGG + chr1_2:68298353-68298372 Msa0087370:CDS 45.0%
! TGTCCTTCAATGGGTTTGGT+AGG - chr1_2:68298457-68298476 None:intergenic 45.0%
!! AGTGGGCTACGAAAAAAGGT+TGG + chr1_2:68298490-68298509 Msa0087370:intron 45.0%
GTTTAATTCATTGCCGCCAG+AGG + chr1_2:68298757-68298776 Msa0087370:CDS 45.0%
CCGCCAGAGGATTACAAAAA+TGG + chr1_2:68298770-68298789 Msa0087370:CDS 45.0%
!! AATGGAGTGTTGGTGTTAGG+AGG + chr1_2:68298788-68298807 Msa0087370:CDS 45.0%
ATTGCTGCTGGAAATGGTGT+TGG + chr1_2:68298966-68298985 Msa0087370:CDS 45.0%
AGAGCTAGTAAGGGATGGAT+TGG + chr1_2:68299075-68299094 Msa0087370:intron 45.0%
AAACTTCAACAGGCGAATGG+TGG + chr1_2:68299315-68299334 Msa0087370:intron 45.0%
ATGAGTGCAAGCCATAATCC+CGG + chr1_2:68299345-68299364 Msa0087370:CDS 45.0%
CAATCATATTCAGGACCACC+GGG - chr1_2:68299366-68299385 None:intergenic 45.0%
CCAATCATATTCAGGACCAC+CGG - chr1_2:68299367-68299386 None:intergenic 45.0%
CGGTGGTCCTGAATATGATT+GGG + chr1_2:68299365-68299384 Msa0087370:CDS 45.0%
GGTGGTCCTGAATATGATTG+GGG + chr1_2:68299366-68299385 Msa0087370:CDS 45.0%
! CAAGCCTTTTGCCACTAAGT+AGG - chr1_2:68299584-68299603 None:intergenic 45.0%
CTACTTAGTGGCAAAAGGCT+TGG + chr1_2:68299582-68299601 Msa0087370:intron 45.0%
CAAGGAACAGACTGAAGGAT+TGG - chr1_2:68299907-68299926 None:intergenic 45.0%
TTGCACATGTGTTGCCTTGT+TGG + chr1_2:68299938-68299957 Msa0087370:intron 45.0%
! CTGCAATAGCACGAAGTGTT+TGG + chr1_2:68300193-68300212 Msa0087370:intron 45.0%
GTCATTTACACTTTGTGGCG+AGG + chr1_2:68300339-68300358 Msa0087370:intron 45.0%
!! GAGGTATCGGCTGAATTGTT+TGG + chr1_2:68300468-68300487 Msa0087370:intron 45.0%
TAGAATTGCATGCCACCACT+TGG + chr1_2:68301072-68301091 Msa0087370:intron 45.0%
GATCTCTGTTTGAGTCCAAG+TGG - chr1_2:68301090-68301109 None:intergenic 45.0%
AGTGGGGCTATATCATCTCA+TGG + chr1_2:68301823-68301842 Msa0087370:intron 45.0%
GTGGGGCTATATCATCTCAT+GGG + chr1_2:68301824-68301843 Msa0087370:intron 45.0%
TTATGCAACCCCCATCTTTG+TGG + chr1_2:68301909-68301928 Msa0087370:CDS 45.0%
!! GGATAAACTTGGTGCTACTC+CGG + chr1_2:68301930-68301949 Msa0087370:CDS 45.0%
TTAAAGGGGGAGAACCATAC+CGG - chr1_2:68301952-68301971 None:intergenic 45.0%
! GAACTTTTGTTCAGGTGACG+GGG + chr1_2:68302514-68302533 Msa0087370:intron 45.0%
AACTCCTTCAGACTCTGTAG+CGG + chr1_2:68302571-68302590 Msa0087370:CDS 45.0%
ATAACCGCTACAGAGTCTGA+AGG - chr1_2:68302578-68302597 None:intergenic 45.0%
GTTGAACCTCCCTTTCTTTG+AGG + chr1_2:68302779-68302798 Msa0087370:CDS 45.0%
AAAAGACGAACCTTGGATGC+AGG + chr1_2:68302888-68302907 Msa0087370:intron 45.0%
! ATTTGCGGGGAAGAGAGTTT+TGG + chr1_2:68302964-68302983 Msa0087370:CDS 45.0%
GACCACATTCGTGAGAAAGA+CGG + chr1_2:68302997-68303016 Msa0087370:CDS 45.0%
TTCCGTCTTTCTCACGAATG+TGG - chr1_2:68303002-68303021 None:intergenic 45.0%
TTCGTGAGAAAGACGGAATC+TGG + chr1_2:68303004-68303023 Msa0087370:CDS 45.0%
TCACTCGGACAACCTTGTAA+AGG + chr1_2:68303161-68303180 Msa0087370:intron 45.0%
ACCTTGTAAAGGAGATGAGG+TGG + chr1_2:68303172-68303191 Msa0087370:intron 45.0%
ACCACCTCATCTCCTTTACA+AGG - chr1_2:68303176-68303195 None:intergenic 45.0%
CTGGTTTCGTGTCTTTGTTG+CGG - chr1_2:68303344-68303363 None:intergenic 45.0%
GCAACAAAGACACGAAACCA+GGG + chr1_2:68303343-68303362 Msa0087370:CDS 45.0%
CAACAAAGACACGAAACCAG+GGG + chr1_2:68303344-68303363 Msa0087370:CDS 45.0%
ACAGAGATCAATTTCTCCCC+TGG - chr1_2:68303363-68303382 None:intergenic 45.0%
AAGGAACATTGGGCAACCTA+TGG + chr1_2:68303396-68303415 Msa0087370:CDS 45.0%
TATGCAGGTAGATGGAAGTG+TGG + chr1_2:68303922-68303941 Msa0087370:intron 45.0%
TGGTATCAAAACAAGGGGTC+CGG + chr1_2:68303942-68303961 Msa0087370:CDS 45.0%
!!! AGGGGTCCGGTTTGTTTTTA+CGG + chr1_2:68303955-68303974 Msa0087370:CDS 45.0%
!!! GTCCGGTTTGTTTTTACGGA+TGG + chr1_2:68303959-68303978 Msa0087370:CDS 45.0%
TCAAGGCAATTTGAGCGTCA+AGG - chr1_2:68304173-68304192 None:intergenic 45.0%
TAGGCGTAATGCACTCAACT+TGG - chr1_2:68304401-68304420 None:intergenic 45.0%
GACAAACCGAACTTGATCTC+AGG - chr1_2:68304435-68304454 None:intergenic 45.0%
GTCTGTGTGATAGGAGTAGG+AGG - chr1_2:68298045-68298064 None:intergenic 50.0%
GGAGATTGGAGAGTGAAGGA+AGG - chr1_2:68298240-68298259 None:intergenic 50.0%
!! GTGTTGGTGTTAGGAGGTGA+TGG + chr1_2:68298794-68298813 Msa0087370:CDS 50.0%
CTTATCACAGCAGAAACGGC+TGG - chr1_2:68299213-68299232 None:intergenic 50.0%
CAGCCGTTTCTGCTGTGATA+AGG + chr1_2:68299211-68299230 Msa0087370:CDS 50.0%
TGCTGTGATAAGGAAGAGGC+AGG + chr1_2:68299221-68299240 Msa0087370:CDS 50.0%
ATTCAGGACCACCGGGATTA+TGG - chr1_2:68299359-68299378 None:intergenic 50.0%
CCGGTGGTCCTGAATATGAT+TGG + chr1_2:68299364-68299383 Msa0087370:CDS 50.0%
TAGTGCTCCCTGAAGTTGCT+TGG + chr1_2:68299467-68299486 Msa0087370:intron 50.0%
ATCGCTAAGGCCCTACTTAG+TGG + chr1_2:68299570-68299589 Msa0087370:intron 50.0%
AGGCCCTACTTAGTGGCAAA+AGG + chr1_2:68299577-68299596 Msa0087370:intron 50.0%
!! TCAGTGATGGATTCTGGTGC+AGG - chr1_2:68299824-68299843 None:intergenic 50.0%
! CACATGTGTTGCCTTGTTGG+AGG + chr1_2:68299941-68299960 Msa0087370:intron 50.0%
! TCAGCCGATACCTCTAGAGA+GGG - chr1_2:68300462-68300481 None:intergenic 50.0%
! TTCAGCCGATACCTCTAGAG+AGG - chr1_2:68300463-68300482 None:intergenic 50.0%
GGGTTGCCTGAATGTTCAAG+TGG - chr1_2:68300608-68300627 None:intergenic 50.0%
CTCTGTTTGAGTCCAAGTGG+TGG - chr1_2:68301087-68301106 None:intergenic 50.0%
TGCTTGAGGTAGCAGCTCTA+AGG - chr1_2:68301112-68301131 None:intergenic 50.0%
! TACGGGGTTGCATGTTGCTT+TGG + chr1_2:68301776-68301795 Msa0087370:intron 50.0%
!! AACTTGGTGCTACTCCGGTA+TGG + chr1_2:68301935-68301954 Msa0087370:intron 50.0%
TCACTAGCAGCTCCGAAATC+AGG - chr1_2:68302235-68302254 None:intergenic 50.0%
GATTTCGGAGCTGCTAGTGA+TGG + chr1_2:68302235-68302254 Msa0087370:CDS 50.0%
CAACCCAGCTTGCACATCTT+TGG + chr1_2:68302268-68302287 Msa0087370:intron 50.0%
! CTATCTAGAGCACCACTCGT+CGG - chr1_2:68302747-68302766 None:intergenic 50.0%
!!! GGGGAAGAGAGTTTTGGAAC+AGG + chr1_2:68302970-68302989 Msa0087370:CDS 50.0%
CGCAACAAAGACACGAAACC+AGG + chr1_2:68303342-68303361 Msa0087370:CDS 50.0%
TGTCTGTGTAAGAGCAAGCC+CGG + chr1_2:68303656-68303675 Msa0087370:CDS 50.0%
AGCAAGCCCGGTGATAAGTA+TGG + chr1_2:68303668-68303687 Msa0087370:CDS 50.0%
TTACAGGGAACAGGTTCTGC+TGG + chr1_2:68304093-68304112 Msa0087370:intron 50.0%
AGTGCAAGCCATAATCCCGG+TGG + chr1_2:68299348-68299367 Msa0087370:CDS 55.0%
TACACTTTGTGGCGAGGGCT+TGG + chr1_2:68300345-68300364 Msa0087370:intron 55.0%
GATGCCATGCATGCAGTTGC+TGG + chr1_2:68301883-68301902 Msa0087370:CDS 55.0%
AGCACCAGCAACTGCATGCA+TGG - chr1_2:68301890-68301909 None:intergenic 55.0%
!! GGGCGGACTATGCTCCAAAA+TGG - chr1_2:68304481-68304500 None:intergenic 55.0%
GCACGATCAATGCCGACGAG+TGG + chr1_2:68302732-68302751 Msa0087370:CDS 60.0%
CCAGTGGGCACCTGCATCCA+AGG - chr1_2:68302901-68302920 None:intergenic 65.0%
CCTTGGATGCAGGTGCCCAC+TGG + chr1_2:68302898-68302917 Msa0087370:intron 65.0%
GGATGCAGGTGCCCACTGGT+TGG + chr1_2:68302902-68302921 Msa0087370:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 68298022 68304620 68298022 ID=Msa0087370;Name=Msa0087370
chr1_2 mRNA 68298022 68304620 68298022 ID=Msa0087370-mRNA-1;Parent=Msa0087370;Name=Msa0087370-mRNA-1;_AED=0.14;_eAED=0.14;_QI=134|1|1|1|1|1|22|261|628
chr1_2 exon 68298022 68298374 68298022 ID=Msa0087370-mRNA-1:exon:23283;Parent=Msa0087370-mRNA-1
chr1_2 exon 68298442 68298507 68298442 ID=Msa0087370-mRNA-1:exon:23284;Parent=Msa0087370-mRNA-1
chr1_2 exon 68298623 68298667 68298623 ID=Msa0087370-mRNA-1:exon:23285;Parent=Msa0087370-mRNA-1
chr1_2 exon 68298752 68298844 68298752 ID=Msa0087370-mRNA-1:exon:23286;Parent=Msa0087370-mRNA-1
chr1_2 exon 68298954 68299006 68298954 ID=Msa0087370-mRNA-1:exon:23287;Parent=Msa0087370-mRNA-1
chr1_2 exon 68299191 68299242 68299191 ID=Msa0087370-mRNA-1:exon:23288;Parent=Msa0087370-mRNA-1
chr1_2 exon 68299327 68299395 68299327 ID=Msa0087370-mRNA-1:exon:23289;Parent=Msa0087370-mRNA-1
chr1_2 exon 68299800 68299868 68299800 ID=Msa0087370-mRNA-1:exon:23290;Parent=Msa0087370-mRNA-1
chr1_2 exon 68301447 68301569 68301447 ID=Msa0087370-mRNA-1:exon:23291;Parent=Msa0087370-mRNA-1
chr1_2 exon 68301682 68301734 68301682 ID=Msa0087370-mRNA-1:exon:23292;Parent=Msa0087370-mRNA-1
chr1_2 exon 68301873 68301951 68301873 ID=Msa0087370-mRNA-1:exon:23293;Parent=Msa0087370-mRNA-1
chr1_2 exon 68302044 68302108 68302044 ID=Msa0087370-mRNA-1:exon:23294;Parent=Msa0087370-mRNA-1
chr1_2 exon 68302189 68302256 68302189 ID=Msa0087370-mRNA-1:exon:23295;Parent=Msa0087370-mRNA-1
chr1_2 exon 68302528 68302646 68302528 ID=Msa0087370-mRNA-1:exon:23296;Parent=Msa0087370-mRNA-1
chr1_2 exon 68302726 68302800 68302726 ID=Msa0087370-mRNA-1:exon:23297;Parent=Msa0087370-mRNA-1
chr1_2 exon 68302910 68303025 68302910 ID=Msa0087370-mRNA-1:exon:23298;Parent=Msa0087370-mRNA-1
chr1_2 exon 68303308 68303449 68303308 ID=Msa0087370-mRNA-1:exon:23299;Parent=Msa0087370-mRNA-1
chr1_2 exon 68303608 68303689 68303608 ID=Msa0087370-mRNA-1:exon:23300;Parent=Msa0087370-mRNA-1
chr1_2 exon 68303779 68303825 68303779 ID=Msa0087370-mRNA-1:exon:23301;Parent=Msa0087370-mRNA-1
chr1_2 exon 68303929 68304006 68303929 ID=Msa0087370-mRNA-1:exon:23302;Parent=Msa0087370-mRNA-1
chr1_2 exon 68304099 68304204 68304099 ID=Msa0087370-mRNA-1:exon:23303;Parent=Msa0087370-mRNA-1
chr1_2 exon 68304292 68304620 68304292 ID=Msa0087370-mRNA-1:exon:23304;Parent=Msa0087370-mRNA-1
chr1_2 five_prime_UTR 68298022 68298155 68298022 ID=Msa0087370-mRNA-1:five_prime_utr;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68298156 68298374 68298156 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68298442 68298507 68298442 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68298623 68298667 68298623 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68298752 68298844 68298752 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68298954 68299006 68298954 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68299191 68299242 68299191 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68299327 68299395 68299327 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68299800 68299868 68299800 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68301447 68301569 68301447 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68301682 68301734 68301682 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68301873 68301951 68301873 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68302044 68302108 68302044 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68302189 68302256 68302189 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68302528 68302646 68302528 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68302726 68302800 68302726 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68302910 68303025 68302910 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68303308 68303449 68303308 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68303608 68303689 68303608 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68303779 68303825 68303779 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68303929 68304006 68303929 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68304099 68304204 68304099 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 CDS 68304292 68304359 68304292 ID=Msa0087370-mRNA-1:cds;Parent=Msa0087370-mRNA-1
chr1_2 three_prime_UTR 68304360 68304620 68304360 ID=Msa0087370-mRNA-1:three_prime_utr;Parent=Msa0087370-mRNA-1
Gene Sequence

>Msa0087370

ATGGCTTTCTGTCACAGACTCAACAACTTCACCATTTCTGCGCTCAAACCTCAAACCTCCAATGTCTCACTTTCAATTCAACCTTCCTTCACTCTCCAATCTCCTTCTTCTTCCTTCAAACTTCAAAACTCTCCGTTAAGAGTCCGCTTTAATTCAATCATCAGAGCAACTTCTTCATCCTCTTCTCCTACAACCATTGCTGAACCTCATGGCATTAAGATTAACTCTATTCCTACCAAACCCATTGAAGGACAAAAAACTGGTACAAGTGGGCTACGAAAAAAGGTGAAAGTGTTTATGCAAGAAAATTACCTTGCAAATTGGATTCAGGCACTGTTTAATTCATTGCCGCCAGAGGATTACAAAAATGGAGTGTTGGTGTTAGGAGGTGATGGTCGATACTTTAATAGAGAAGCTGCACAGATAATAATCAAAATTGCTGCTGGAAATGGTGTTGGAAAAATTCTGGTTGGAAAGGAAGGGATATTGTCAACACCAGCCGTTTCTGCTGTGATAAGGAAGAGGCAGGCGAATGGTGGATTTATTATGAGTGCAAGCCATAATCCCGGTGGTCCTGAATATGATTGGGGTATTAAGTTTAATTACAGTAGTGGACAACCTGCACCAGAATCCATCACTGACAAGATTTACGGAAACACCCTATCTATTTCTGAGATAAAGATTGCTGACATTCCTGACGTTGACTTATCAAATGTTGGGGTTACAAAATTCGGAAGCTTCAGTGTGGAAGTAATAGATCCAGTTTCTGATTATCTGGAGCTATTGGAGACAGTATTTGATTTTCAGCTAATCAAAGGTCTTATTTCACGGCCAGATTTTAGGTTTACATTTGATGCCATGCATGCAGTTGCTGGTGCTTATGCAACCCCCATCTTTGTGGATAAACTTGGTGCTACTCCGGATTCAATTTCAAATGGAATACCTTTGGAAGATTTTGGACATGGTCATCCTGATCCTAATCTAACATATGCAAAGGATCTTGTCAACATTATGTATGCTGAAAATGGACCTGATTTCGGAGCTGCTAGTGATGGTGACGGGGATAGAAATATGATTTTAGGAACAAGTTTCTTTGTAACTCCTTCAGACTCTGTAGCGGTTATTGCAGCCAATGCAAAAGAAGCGATTCCATACTTCAAGAACAGTGTTAAGGGTCTTGCACGATCAATGCCGACGAGTGGTGCTCTAGATAGAGTTGCTGAAAAGTTGAACCTCCCTTTCTTTGAGGTGCCCACTGGTTGGAAATTTTTTGGGAATCTTATGGATGCTGGGAATTTGTCAATTTGCGGGGAAGAGAGTTTTGGAACAGGTTCTGACCACATTCGTGAGAAAGACGGAATCTGGGCTGTATTAGCTTGGCTTTCTATTATTGCTCACCGCAACAAAGACACGAAACCAGGGGAGAAATTGATCTCTGTATCTGATGTTGTAAAGGAACATTGGGCAACCTATGGTAGAAATTTCTTTTCTAGATATGACTACGAGGAATGTGAATCCGAAGGGGCCAATAAGATGATAGAGTATCTAAGAGAGTGTCTGTGTAAGAGCAAGCCCGGTGATAAGTATGGAAGTTATGTCCTCCAGTTTGCAGATGATTTTACATACACTGATCCTGTAGATGGAAGTGTGGTATCAAAACAAGGGGTCCGGTTTGTTTTTACGGATGGTTCAAGGATTATTTATCGTTTATCAGGAACAGGTTCTGCTGGTGCAACTGTTAGAGTGTATATTGAACAGTTTGAACCAGATGTTTCTAAACACGACCTTGACGCTCAAATTGCCTTGAAACCGTTAATAGATTTAGCATTATCCGTTTCAAAGCTCAAAGAGTTCACAGGGAGAGAGAAGCCTACAGTCATCACTTAA

Protein sequence

>Msa0087370

MAFCHRLNNFTISALKPQTSNVSLSIQPSFTLQSPSSSFKLQNSPLRVRFNSIIRATSSSSSPTTIAEPHGIKINSIPTKPIEGQKTGTSGLRKKVKVFMQENYLANWIQALFNSLPPEDYKNGVLVLGGDGRYFNREAAQIIIKIAAGNGVGKILVGKEGILSTPAVSAVIRKRQANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKIADIPDVDLSNVGVTKFGSFSVEVIDPVSDYLELLETVFDFQLIKGLISRPDFRFTFDAMHAVAGAYATPIFVDKLGATPDSISNGIPLEDFGHGHPDPNLTYAKDLVNIMYAENGPDFGAASDGDGDRNMILGTSFFVTPSDSVAVIAANAKEAIPYFKNSVKGLARSMPTSGALDRVAEKLNLPFFEVPTGWKFFGNLMDAGNLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAHRNKDTKPGEKLISVSDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRECLCKSKPGDKYGSYVLQFADDFTYTDPVDGSVVSKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDVSKHDLDAQIALKPLIDLALSVSKLKEFTGREKPTVIT*