Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0995250 | XP_004497487.1 | 73.280 | 378 | 101 | 0 | 1 | 378 | 1 | 378 | 0.0 | 589 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0995250 | sp|Q6Q3H3|TPSGD_VITVI | 55.085 | 354 | 155 | 1 | 17 | 370 | 22 | 371 | 3.04e-141 | 416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0995250 | A0A1S2Y0Q7 | 73.280 | 378 | 101 | 0 | 1 | 378 | 1 | 378 | 0.0 | 589 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0894130 | Msa0995250 | 0.836271 | 1.031750e-56 | -8.615850e-47 |
| Msa0894140 | Msa0995250 | 0.877131 | 8.036406e-69 | -8.615850e-47 |
| Msa0894190 | Msa0995250 | 0.862721 | 4.147558e-64 | -8.615850e-47 |
| Msa0920900 | Msa0995250 | 0.871738 | 5.434751e-67 | -8.615850e-47 |
| Msa0920920 | Msa0995250 | 0.895461 | 9.372746e-76 | -8.615850e-47 |
| Msa0959400 | Msa0995250 | 0.875900 | 2.139915e-68 | -8.615850e-47 |
| Msa0959420 | Msa0995250 | 0.842669 | 2.245662e-58 | -8.615850e-47 |
| Msa0967510 | Msa0995250 | 0.874723 | 5.402913e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0995250 | MtrunA17_Chr5g0425371 | 71.504 | 379 | 105 | 1 | 1 | 379 | 1 | 376 | 0.0 | 572 |
| Msa0995250 | MtrunA17_Chr6g0465981 | 71.883 | 377 | 103 | 1 | 1 | 377 | 1 | 374 | 0.0 | 567 |
| Msa0995250 | MtrunA17_Chr6g0465871 | 71.883 | 377 | 103 | 1 | 1 | 377 | 1 | 374 | 0.0 | 567 |
| Msa0995250 | MtrunA17_Chr6g0466081 | 71.883 | 377 | 103 | 1 | 1 | 377 | 1 | 374 | 0.0 | 567 |
| Msa0995250 | MtrunA17_Chr6g0466051 | 71.693 | 378 | 104 | 1 | 1 | 378 | 1 | 375 | 0.0 | 566 |
| Msa0995250 | MtrunA17_Chr6g0465911 | 71.429 | 378 | 105 | 1 | 1 | 378 | 1 | 375 | 0.0 | 565 |
| Msa0995250 | MtrunA17_Chr7g0236991 | 71.159 | 371 | 104 | 1 | 1 | 371 | 1 | 368 | 0.0 | 560 |
| Msa0995250 | MtrunA17_Chr7g0237001 | 70.889 | 371 | 105 | 1 | 1 | 371 | 1 | 368 | 0.0 | 558 |
| Msa0995250 | MtrunA17_Chr7g0237041 | 70.889 | 371 | 105 | 1 | 1 | 371 | 1 | 368 | 0.0 | 558 |
| Msa0995250 | MtrunA17_Chr7g0237081 | 70.889 | 371 | 105 | 1 | 1 | 371 | 1 | 368 | 0.0 | 558 |
| Msa0995250 | MtrunA17_Chr7g0237051 | 70.889 | 371 | 105 | 1 | 1 | 371 | 1 | 368 | 0.0 | 558 |
| Msa0995250 | MtrunA17_Chr6g0451711 | 68.684 | 380 | 118 | 1 | 1 | 379 | 1 | 380 | 0.0 | 547 |
| Msa0995250 | MtrunA17_Chr6g0465441 | 68.519 | 378 | 116 | 1 | 1 | 378 | 1 | 375 | 0.0 | 546 |
| Msa0995250 | MtrunA17_Chr3g0105071 | 67.282 | 379 | 123 | 1 | 1 | 378 | 1 | 379 | 0.0 | 533 |
| Msa0995250 | MtrunA17_Chr3g0082691 | 68.579 | 366 | 114 | 1 | 12 | 376 | 8 | 373 | 0.0 | 522 |
| Msa0995250 | MtrunA17_Chr6g0466111 | 73.451 | 339 | 90 | 0 | 39 | 377 | 1 | 339 | 0.0 | 519 |
| Msa0995250 | MtrunA17_Chr6g0465851 | 72.941 | 340 | 92 | 0 | 39 | 378 | 1 | 340 | 0.0 | 517 |
| Msa0995250 | MtrunA17_Chr6g0465931 | 73.156 | 339 | 91 | 0 | 39 | 377 | 1 | 339 | 0.0 | 516 |
| Msa0995250 | MtrunA17_Chr5g0431571 | 70.137 | 365 | 108 | 1 | 12 | 375 | 4 | 368 | 0.0 | 515 |
| Msa0995250 | MtrunA17_Chr4g0024691 | 65.323 | 372 | 129 | 0 | 7 | 378 | 12 | 383 | 7.33e-180 | 511 |
| Msa0995250 | MtrunA17_Chr5g0431651 | 66.576 | 368 | 121 | 2 | 13 | 378 | 7 | 374 | 2.26e-177 | 504 |
| Msa0995250 | MtrunA17_Chr7g0236951 | 71.787 | 319 | 90 | 0 | 59 | 377 | 1 | 319 | 1.63e-174 | 488 |
| Msa0995250 | MtrunA17_Chr7g0237031 | 71.787 | 319 | 90 | 0 | 59 | 377 | 1 | 319 | 5.21e-174 | 487 |
| Msa0995250 | MtrunA17_Chr7g0236961 | 72.524 | 313 | 86 | 0 | 59 | 371 | 1 | 313 | 2.42e-171 | 487 |
| Msa0995250 | MtrunA17_Chr7g0237011 | 72.524 | 313 | 86 | 0 | 59 | 371 | 1 | 313 | 1.02e-170 | 486 |
| Msa0995250 | MtrunA17_Chr4g0042111 | 60.377 | 371 | 144 | 2 | 2 | 370 | 7 | 376 | 1.36e-162 | 467 |
| Msa0995250 | MtrunA17_Chr2g0319041 | 47.740 | 354 | 182 | 3 | 15 | 365 | 12 | 365 | 2.61e-119 | 357 |
| Msa0995250 | MtrunA17_Chr5g0445511 | 69.432 | 229 | 70 | 0 | 151 | 379 | 1 | 229 | 9.18e-118 | 341 |
| Msa0995250 | MtrunA17_Chr8g0336181 | 48.997 | 349 | 175 | 2 | 13 | 358 | 9 | 357 | 1.24e-116 | 350 |
| Msa0995250 | MtrunA17_Chr4g0008621 | 45.479 | 365 | 196 | 3 | 15 | 376 | 19 | 383 | 3.00e-114 | 340 |
| Msa0995250 | MtrunA17_Chr7g0236971 | 71.296 | 216 | 62 | 0 | 156 | 371 | 1 | 216 | 9.19e-113 | 335 |
| Msa0995250 | MtrunA17_Chr2g0319051 | 46.526 | 331 | 175 | 2 | 48 | 376 | 4 | 334 | 2.23e-108 | 327 |
| Msa0995250 | MtrunA17_Chr6g0466021 | 70.588 | 204 | 57 | 1 | 1 | 204 | 1 | 201 | 2.96e-102 | 300 |
| Msa0995250 | MtrunA17_Chr7g0237071 | 70.297 | 202 | 60 | 0 | 59 | 260 | 1 | 202 | 7.27e-100 | 295 |
| Msa0995250 | MtrunA17_Chr4g0023911 | 39.837 | 369 | 210 | 5 | 13 | 377 | 41 | 401 | 4.42e-87 | 274 |
| Msa0995250 | MtrunA17_Chr2g0310331 | 42.700 | 363 | 198 | 6 | 17 | 377 | 53 | 407 | 1.61e-86 | 273 |
| Msa0995250 | MtrunA17_Chr8g0357411 | 38.211 | 369 | 221 | 3 | 10 | 377 | 48 | 410 | 2.35e-79 | 254 |
| Msa0995250 | MtrunA17_Chr2g0323131 | 40.439 | 319 | 176 | 3 | 49 | 364 | 67 | 374 | 3.18e-78 | 251 |
| Msa0995250 | MtrunA17_Chr2g0323151 | 41.414 | 297 | 161 | 2 | 71 | 364 | 4 | 290 | 9.38e-74 | 237 |
| Msa0995250 | MtrunA17_Chr2g0319071 | 35.168 | 327 | 166 | 6 | 53 | 377 | 28 | 310 | 2.69e-61 | 204 |
| Msa0995250 | MtrunA17_Chr7g0236981 | 67.407 | 135 | 41 | 1 | 1 | 135 | 1 | 132 | 1.65e-60 | 192 |
| Msa0995250 | MtrunA17_Chr4g0048921 | 36.420 | 324 | 197 | 5 | 44 | 365 | 64 | 380 | 3.33e-57 | 196 |
| Msa0995250 | MtrunA17_Chr4g0048911 | 35.294 | 306 | 192 | 4 | 55 | 357 | 61 | 363 | 1.11e-56 | 194 |
| Msa0995250 | MtrunA17_Chr7g0233861 | 65.185 | 135 | 38 | 1 | 196 | 330 | 33 | 158 | 2.91e-55 | 179 |
| Msa0995250 | MtrunA17_Chr2g0280581 | 33.030 | 330 | 202 | 5 | 47 | 365 | 9 | 330 | 2.31e-51 | 179 |
| Msa0995250 | MtrunA17_Chr2g0310401 | 38.000 | 250 | 152 | 2 | 130 | 377 | 5 | 253 | 1.99e-49 | 172 |
| Msa0995250 | MtrunA17_Chr3g0109021 | 32.278 | 316 | 208 | 6 | 54 | 365 | 13 | 326 | 3.01e-43 | 157 |
| Msa0995250 | MtrunA17_Chr3g0105691 | 32.450 | 302 | 201 | 3 | 54 | 353 | 46 | 346 | 7.07e-43 | 157 |
| Msa0995250 | MtrunA17_Chr3g0109031 | 31.646 | 316 | 210 | 6 | 54 | 365 | 13 | 326 | 7.30e-43 | 156 |
| Msa0995250 | MtrunA17_Chr8g0357221 | 36.546 | 249 | 151 | 3 | 10 | 257 | 48 | 290 | 1.20e-42 | 150 |
| Msa0995250 | MtrunA17_Chr3g0109001 | 31.546 | 317 | 210 | 6 | 54 | 365 | 13 | 327 | 1.35e-42 | 155 |
| Msa0995250 | MtrunA17_Chr3g0108941 | 31.230 | 317 | 211 | 6 | 54 | 365 | 13 | 327 | 4.44e-42 | 154 |
| Msa0995250 | MtrunA17_Chr5g0445521 | 66.327 | 98 | 33 | 0 | 1 | 98 | 1 | 98 | 6.56e-42 | 142 |
| Msa0995250 | MtrunA17_Chr3g0108981 | 31.313 | 297 | 200 | 3 | 73 | 365 | 6 | 302 | 4.14e-41 | 151 |
| Msa0995250 | MtrunA17_Chr3g0108961 | 31.313 | 297 | 200 | 3 | 73 | 365 | 6 | 302 | 4.14e-41 | 151 |
| Msa0995250 | MtrunA17_Chr6g0477111 | 31.313 | 297 | 199 | 5 | 73 | 365 | 6 | 301 | 5.65e-41 | 150 |
| Msa0995250 | MtrunA17_Chr3g0099031 | 31.329 | 316 | 211 | 6 | 54 | 365 | 13 | 326 | 4.02e-40 | 149 |
| Msa0995250 | MtrunA17_Chr3g0108991 | 31.013 | 316 | 212 | 6 | 54 | 365 | 13 | 326 | 1.04e-39 | 147 |
| Msa0995250 | MtrunA17_Chr3g0108951 | 31.013 | 316 | 212 | 6 | 54 | 365 | 13 | 326 | 1.04e-39 | 147 |
| Msa0995250 | MtrunA17_Chr3g0108971 | 30.976 | 297 | 200 | 5 | 73 | 365 | 6 | 301 | 8.59e-39 | 144 |
| Msa0995250 | MtrunA17_Chr3g0109011 | 30.303 | 297 | 202 | 5 | 73 | 365 | 6 | 301 | 1.74e-38 | 144 |
| Msa0995250 | MtrunA17_Chr5g0445401 | 68.421 | 95 | 26 | 2 | 166 | 257 | 1 | 94 | 9.49e-35 | 123 |
| Msa0995250 | MtrunA17_Chr2g0319081 | 40.690 | 145 | 79 | 3 | 233 | 376 | 120 | 258 | 3.83e-32 | 125 |
| Msa0995250 | MtrunA17_Chr2g0319081 | 40.984 | 122 | 71 | 1 | 15 | 135 | 19 | 140 | 3.82e-24 | 103 |
| Msa0995250 | MtrunA17_Chr7g0237061 | 73.333 | 75 | 20 | 0 | 297 | 371 | 1 | 75 | 3.04e-31 | 119 |
| Msa0995250 | MtrunA17_Chr6g0477121 | 30.932 | 236 | 159 | 4 | 133 | 365 | 10 | 244 | 2.05e-30 | 120 |
| Msa0995250 | MtrunA17_Chr2g0310121 | 28.000 | 325 | 201 | 9 | 69 | 366 | 274 | 592 | 2.57e-29 | 119 |
| Msa0995250 | MtrunA17_Chr3g0101681 | 28.049 | 328 | 203 | 9 | 69 | 369 | 275 | 596 | 2.34e-28 | 117 |
| Msa0995250 | MtrunA17_Chr6g0466031 | 64.634 | 82 | 29 | 0 | 297 | 378 | 1 | 82 | 1.17e-26 | 107 |
| Msa0995250 | MtrunA17_Chr7g0259881 | 27.407 | 270 | 164 | 6 | 73 | 313 | 232 | 498 | 2.25e-24 | 105 |
| Msa0995250 | MtrunA17_Chr7g0218001 | 29.740 | 269 | 157 | 6 | 73 | 310 | 349 | 616 | 8.78e-24 | 103 |
| Msa0995250 | MtrunA17_Chr7g0217361 | 40.909 | 110 | 65 | 0 | 255 | 364 | 8 | 117 | 1.06e-21 | 94.4 |
| Msa0995250 | MtrunA17_Chr7g0217351 | 29.954 | 217 | 143 | 5 | 46 | 258 | 62 | 273 | 2.43e-21 | 93.2 |
| Msa0995250 | MtrunA17_Chr8g0357231 | 41.250 | 80 | 47 | 0 | 298 | 377 | 1 | 80 | 1.08e-15 | 76.3 |
| Msa0995250 | MtrunA17_Chr7g0218041 | 30.594 | 219 | 124 | 6 | 120 | 311 | 3 | 220 | 3.59e-14 | 73.6 |
| Msa0995250 | MtrunA17_Chr2g0310411 | 32.787 | 122 | 74 | 3 | 10 | 131 | 51 | 164 | 4.01e-13 | 67.0 |
| Msa0995250 | MtrunA17_Chr2g0281651 | 29.412 | 153 | 103 | 3 | 214 | 365 | 24 | 172 | 1.00e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0995250 | AT5G23960.2 | 37.640 | 356 | 218 | 3 | 13 | 366 | 3 | 356 | 8.37e-90 | 281 |
| Msa0995250 | AT1G70080.1 | 38.522 | 379 | 224 | 6 | 8 | 379 | 57 | 433 | 1.37e-89 | 282 |
| Msa0995250 | AT5G23960.1 | 37.604 | 359 | 216 | 5 | 13 | 366 | 3 | 358 | 1.40e-88 | 278 |
| Msa0995250 | AT3G14490.1 | 38.859 | 368 | 215 | 5 | 17 | 378 | 60 | 423 | 1.46e-86 | 274 |
| Msa0995250 | AT1G31950.2 | 37.838 | 370 | 208 | 5 | 22 | 379 | 70 | 429 | 3.93e-85 | 268 |
| Msa0995250 | AT1G31950.3 | 37.838 | 370 | 208 | 5 | 22 | 379 | 70 | 429 | 2.74e-84 | 268 |
| Msa0995250 | AT1G31950.1 | 38.292 | 363 | 215 | 4 | 22 | 379 | 70 | 428 | 2.00e-83 | 266 |
| Msa0995250 | AT3G14540.2 | 38.674 | 362 | 215 | 3 | 22 | 379 | 65 | 423 | 5.75e-83 | 262 |
| Msa0995250 | AT3G14520.1 | 38.398 | 362 | 214 | 4 | 22 | 378 | 68 | 425 | 3.87e-82 | 262 |
| Msa0995250 | AT3G14540.1 | 38.674 | 362 | 215 | 3 | 22 | 379 | 65 | 423 | 6.22e-82 | 262 |
| Msa0995250 | AT4G15870.1 | 38.056 | 360 | 211 | 7 | 25 | 376 | 75 | 430 | 1.50e-78 | 253 |
| Msa0995250 | AT5G44630.1 | 36.461 | 373 | 220 | 7 | 18 | 379 | 14 | 380 | 3.72e-77 | 248 |
| Msa0995250 | AT1G33750.1 | 36.034 | 358 | 223 | 4 | 24 | 379 | 73 | 426 | 5.34e-76 | 246 |
| Msa0995250 | AT3G29410.1 | 37.260 | 365 | 223 | 5 | 17 | 378 | 64 | 425 | 6.67e-76 | 246 |
| Msa0995250 | AT4G20210.1 | 35.849 | 371 | 225 | 7 | 17 | 379 | 58 | 423 | 2.59e-73 | 239 |
| Msa0995250 | AT3G32030.1 | 35.457 | 361 | 226 | 5 | 22 | 378 | 68 | 425 | 7.76e-73 | 238 |
| Msa0995250 | AT3G29410.2 | 38.907 | 311 | 186 | 3 | 70 | 378 | 12 | 320 | 3.53e-71 | 231 |
| Msa0995250 | AT4G13300.1 | 36.288 | 361 | 220 | 6 | 25 | 379 | 20 | 376 | 1.33e-70 | 231 |
| Msa0995250 | AT3G29110.1 | 37.190 | 363 | 215 | 8 | 17 | 371 | 55 | 412 | 1.60e-70 | 232 |
| Msa0995250 | AT2G23230.2 | 36.461 | 373 | 223 | 8 | 16 | 379 | 55 | 422 | 3.45e-70 | 231 |
| Msa0995250 | AT2G23230.1 | 36.757 | 370 | 220 | 8 | 16 | 376 | 55 | 419 | 3.85e-70 | 231 |
| Msa0995250 | AT4G20200.1 | 36.723 | 354 | 193 | 8 | 47 | 379 | 84 | 427 | 4.10e-70 | 231 |
| Msa0995250 | AT4G16740.2 | 34.828 | 379 | 227 | 8 | 12 | 379 | 21 | 390 | 6.21e-70 | 225 |
| Msa0995250 | AT4G16730.1 | 37.389 | 337 | 193 | 6 | 52 | 377 | 27 | 356 | 1.09e-69 | 228 |
| Msa0995250 | AT3G29190.1 | 35.882 | 340 | 210 | 5 | 45 | 378 | 86 | 423 | 3.30e-69 | 228 |
| Msa0995250 | AT1G66020.2 | 34.605 | 367 | 231 | 6 | 17 | 377 | 56 | 419 | 1.18e-68 | 223 |
| Msa0995250 | AT4G20230.1 | 35.311 | 354 | 216 | 7 | 25 | 370 | 70 | 418 | 5.97e-68 | 225 |
| Msa0995250 | AT4G16730.2 | 37.975 | 316 | 179 | 5 | 73 | 377 | 1 | 310 | 6.05e-68 | 223 |
| Msa0995250 | AT4G20230.2 | 35.311 | 354 | 216 | 7 | 25 | 370 | 82 | 430 | 7.54e-68 | 225 |
| Msa0995250 | AT4G16740.1 | 34.667 | 375 | 226 | 7 | 12 | 376 | 21 | 386 | 1.47e-67 | 223 |
| Msa0995250 | AT1G66020.1 | 34.146 | 369 | 234 | 6 | 17 | 379 | 56 | 421 | 1.53e-66 | 221 |
| Msa0995250 | AT2G24210.1 | 34.933 | 375 | 228 | 7 | 10 | 376 | 39 | 405 | 3.54e-66 | 220 |
| Msa0995250 | AT4G13280.1 | 36.134 | 357 | 218 | 6 | 27 | 377 | 22 | 374 | 4.50e-66 | 218 |
| Msa0995250 | AT4G13280.2 | 36.134 | 357 | 218 | 6 | 27 | 377 | 22 | 374 | 7.49e-66 | 218 |
| Msa0995250 | AT3G25820.2 | 33.521 | 355 | 212 | 8 | 15 | 357 | 45 | 387 | 1.11e-61 | 205 |
| Msa0995250 | AT1G48800.1 | 34.048 | 373 | 230 | 9 | 16 | 378 | 62 | 428 | 1.79e-60 | 205 |
| Msa0995250 | AT3G25820.1 | 33.521 | 355 | 212 | 8 | 15 | 357 | 45 | 387 | 4.20e-60 | 204 |
| Msa0995250 | AT3G25830.1 | 33.521 | 355 | 212 | 8 | 15 | 357 | 45 | 387 | 4.20e-60 | 204 |
| Msa0995250 | AT4G16740.4 | 34.650 | 329 | 197 | 6 | 12 | 330 | 21 | 341 | 3.14e-59 | 196 |
| Msa0995250 | AT4G16740.3 | 34.650 | 329 | 197 | 6 | 12 | 330 | 21 | 341 | 3.14e-59 | 196 |
| Msa0995250 | AT1G48820.1 | 34.648 | 355 | 199 | 9 | 17 | 366 | 63 | 389 | 9.08e-57 | 194 |
| Msa0995250 | AT3G25810.1 | 32.092 | 349 | 220 | 6 | 15 | 352 | 45 | 387 | 3.56e-55 | 191 |
| Msa0995250 | AT3G25820.4 | 32.622 | 328 | 200 | 7 | 15 | 330 | 45 | 363 | 1.77e-54 | 184 |
| Msa0995250 | AT3G25820.3 | 32.622 | 328 | 200 | 7 | 15 | 330 | 45 | 363 | 1.77e-54 | 184 |
| Msa0995250 | AT1G61680.1 | 32.381 | 315 | 202 | 3 | 54 | 363 | 77 | 385 | 1.10e-49 | 176 |
| Msa0995250 | AT1G61680.2 | 31.746 | 315 | 197 | 4 | 54 | 363 | 77 | 378 | 1.84e-46 | 167 |
| Msa0995250 | AT5G48110.1 | 44.785 | 163 | 88 | 2 | 215 | 376 | 1 | 162 | 1.44e-42 | 152 |
| Msa0995250 | AT1G79460.1 | 27.761 | 335 | 194 | 13 | 69 | 369 | 273 | 593 | 2.08e-23 | 102 |
| Msa0995250 | AT4G02780.1 | 29.412 | 255 | 152 | 5 | 73 | 300 | 334 | 587 | 2.42e-23 | 102 |
| Msa0995250 | AT1G61120.1 | 26.774 | 310 | 195 | 7 | 68 | 356 | 286 | 584 | 2.68e-20 | 93.2 |
Find 58 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTCTTGCTGTGCTATTT+AGG | 0.103456 | 6_4:-71125726 | Msa0995250:CDS |
| TCTACTTGCATTGGCAAAAT+TGG | 0.119753 | 6_4:-71124606 | Msa0995250:CDS |
| TTCTCTTGCTGTGCTATTTA+GGG | 0.189824 | 6_4:-71125725 | Msa0995250:CDS |
| GGTTCATGGTGAAAATATTT+TGG | 0.219650 | 6_4:-71124804 | Msa0995250:CDS |
| TTTCCTTGCTTGAGAATATT+GGG | 0.241792 | 6_4:+71124322 | None:intergenic |
| ATGCAAGTAGAATTTCATTA+TGG | 0.248221 | 6_4:+71124618 | None:intergenic |
| AGAAGAAATTAGTCAAGTTT+TGG | 0.262222 | 6_4:-71125806 | Msa0995250:CDS |
| TACAAGAGTTATGTTCAAAA+TGG | 0.269625 | 6_4:-71125775 | Msa0995250:CDS |
| GTCATCAATGTATGATAAAA+TGG | 0.310334 | 6_4:+71124280 | None:intergenic |
| CAGATTTCCACCCTAGCGTT+TGG | 0.311610 | 6_4:-71126182 | Msa0995250:CDS |
| AGATTTCCACCCTAGCGTTT+GGG | 0.325288 | 6_4:-71126181 | Msa0995250:CDS |
| TGCAAAACCGATTTCTCATT+AGG | 0.335406 | 6_4:+71126216 | None:intergenic |
| TAATTGCTTGGAGGATCTTC+CGG | 0.335446 | 6_4:-71123916 | Msa0995250:CDS |
| TTCCTTGCTCGTCCTTGAAT+TGG | 0.345782 | 6_4:+71124894 | None:intergenic |
| GAGTAGTAGAATGTTGCTTT+TGG | 0.347068 | 6_4:-71124367 | Msa0995250:CDS |
| TGTGCCGCAATATTCATATC+AGG | 0.348479 | 6_4:+71125946 | None:intergenic |
| CTTCAATCCTAATGAGAAAT+CGG | 0.354762 | 6_4:-71126223 | Msa0995250:CDS |
| TCAGTATGCTTCAGAATCTA+TGG | 0.376448 | 6_4:-71126145 | Msa0995250:intron |
| TGCAAGTAGAATTTCATTAT+GGG | 0.387262 | 6_4:+71124619 | None:intergenic |
| GGATGAATCTTGCTCATAGA+TGG | 0.390050 | 6_4:+71124640 | None:intergenic |
| GATTGACTCGATATGTCGTT+TGG | 0.393872 | 6_4:-71125848 | Msa0995250:CDS |
| TAAAGCAACTTCGTGTAATC+CGG | 0.404734 | 6_4:+71123897 | None:intergenic |
| GTTGCTTTATAAATCACTCT+TGG | 0.404999 | 6_4:-71123883 | Msa0995250:CDS |
| TAGGTGGGATATTAATTGCT+TGG | 0.452782 | 6_4:-71123928 | Msa0995250:CDS |
| TAATGAAATTCTACTTGCAT+TGG | 0.460272 | 6_4:-71124615 | Msa0995250:CDS |
| TTGCAAGAGAAGGACTCAAT+CGG | 0.462800 | 6_4:+71124735 | None:intergenic |
| TTCTGGTCACCTTCAGTCCA+TGG | 0.466911 | 6_4:-71124762 | Msa0995250:CDS |
| GATGACACATATGATGCATA+TGG | 0.467097 | 6_4:-71124263 | Msa0995250:CDS |
| GAGCAAGAAATGAAGAAAGA+AGG | 0.470516 | 6_4:-71123843 | Msa0995250:CDS |
| ATTGACTCGATATGTCGTTT+GGG | 0.487347 | 6_4:-71125847 | Msa0995250:CDS |
| ATATTGGGGCTCAAAATATA+CGG | 0.495144 | 6_4:+71124337 | None:intergenic |
| CTGTGCTATTTAGGGTGTTG+AGG | 0.502767 | 6_4:-71125717 | Msa0995250:CDS |
| ATATAGGTGGTGGAAGGAGT+TGG | 0.505587 | 6_4:-71124423 | Msa0995250:intron |
| CATGGACTTTACGTTTCACC+TGG | 0.512238 | 6_4:-71125691 | Msa0995250:intron |
| AGGACTCAATCGGGTGGCCA+TGG | 0.512884 | 6_4:+71124745 | None:intergenic |
| AGACGTGTTCAACCAATTCA+AGG | 0.513816 | 6_4:-71124906 | Msa0995250:CDS |
| TAACTTCTTGCCACTAGCCT+AGG | 0.521919 | 6_4:+71124668 | None:intergenic |
| AGGAAATTTCAGTGAAACAT+TGG | 0.522145 | 6_4:-71124876 | Msa0995250:CDS |
| GCCTCACATATGATGGTTCA+TGG | 0.522278 | 6_4:-71124818 | Msa0995250:CDS |
| ATGATGTGCTAACCTTTCAA+TGG | 0.523871 | 6_4:+71124208 | None:intergenic |
| GTGGGATATTAATTGCTTGG+AGG | 0.529634 | 6_4:-71123925 | Msa0995250:CDS |
| TTCCTTGCTTGAGAATATTG+GGG | 0.534381 | 6_4:+71124323 | None:intergenic |
| AACATTGGTCGTAGATGTTG+AGG | 0.541350 | 6_4:-71124861 | Msa0995250:CDS |
| TGCAAGAGAAGGACTCAATC+GGG | 0.546913 | 6_4:+71124736 | None:intergenic |
| AGCCCCAATATTCTCAAGCA+AGG | 0.547455 | 6_4:-71124325 | Msa0995250:CDS |
| TTTAGGGTGTTGAGGCAACA+TGG | 0.552007 | 6_4:-71125709 | Msa0995250:CDS |
| ATCGGGTGGCCATGGACTGA+AGG | 0.566605 | 6_4:+71124753 | None:intergenic |
| CTTTGTATATAGGTGGTGGA+AGG | 0.567617 | 6_4:-71124429 | Msa0995250:intron |
| GTATGAAGCCTCACATATGA+TGG | 0.567934 | 6_4:-71124825 | Msa0995250:CDS |
| ATAGCACAGCAAGAGAATGA+AGG | 0.572946 | 6_4:+71125731 | None:intergenic |
| ACTACTCTATCTCGTGCATA+CGG | 0.590301 | 6_4:+71124383 | None:intergenic |
| GATTTCCACCCTAGCGTTTG+GGG | 0.596026 | 6_4:-71126180 | Msa0995250:CDS |
| AATCTCCCCAAACGCTAGGG+TGG | 0.601357 | 6_4:+71126175 | None:intergenic |
| AACCAATTCAAGGACGAGCA+AGG | 0.615624 | 6_4:-71124896 | Msa0995250:CDS |
| GGAACCTGATATGAATATTG+CGG | 0.628405 | 6_4:-71125950 | Msa0995250:CDS |
| ACATTGGTCGTAGATGTTGA+GGG | 0.633793 | 6_4:-71124860 | Msa0995250:CDS |
| ACCATGAACCATCATATGTG+AGG | 0.634158 | 6_4:+71124817 | None:intergenic |
| AAGAGAAGGACTCAATCGGG+TGG | 0.695745 | 6_4:+71124739 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATATTTTTTTTAAATT+AGG | + | chr6_4:71125532-71125551 | None:intergenic | 0.0% |
| !!! | CATTTTTTATGTTTTTAATT+TGG | - | chr6_4:71124432-71124451 | Msa0995250:intron | 10.0% |
| !!! | AGATAATAATTTTTTTTTTG+TGG | + | chr6_4:71124828-71124847 | None:intergenic | 10.0% |
| !! | ATGAGTAAATAAATAGTATA+AGG | + | chr6_4:71124045-71124064 | None:intergenic | 15.0% |
| !! | ACAAATTGATAAACTAAAAA+AGG | - | chr6_4:71124111-71124130 | Msa0995250:intron | 15.0% |
| !! | TAATATTTGACTATATTCAT+GGG | - | chr6_4:71124539-71124558 | Msa0995250:intron | 15.0% |
| !! | TAATATGAATGTCTAAAAAA+TGG | - | chr6_4:71124568-71124587 | Msa0995250:CDS | 15.0% |
| !! | GATAATAATTAAAACAAATG+AGG | + | chr6_4:71124725-71124744 | None:intergenic | 15.0% |
| !!! | TAATAATTTTTTTTTTGTGG+TGG | + | chr6_4:71124825-71124844 | None:intergenic | 15.0% |
| !! | AATATTAATGTTATACATGT+AGG | - | chr6_4:71124902-71124921 | Msa0995250:CDS | 15.0% |
| !! | TATAAATAAGAAACTAATAC+AGG | + | chr6_4:71125050-71125069 | None:intergenic | 15.0% |
| !! | ATAAATTAATATGTCTCTAA+TGG | - | chr6_4:71125071-71125090 | Msa0995250:intron | 15.0% |
| !!! | TATTTTTTTTAAATTAGGCA+GGG | + | chr6_4:71125527-71125546 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTTAAATTAGGC+AGG | + | chr6_4:71125528-71125547 | None:intergenic | 15.0% |
| !!! | TATTTTTTGTCTTTGTATAT+AGG | - | chr6_4:71125598-71125617 | Msa0995250:intron | 15.0% |
| !! | GATTAAAGATAAATTTCATA+TGG | + | chr6_4:71125908-71125927 | None:intergenic | 15.0% |
| !! | AATTCTTTAAATCAACAAGA+AGG | - | chr6_4:71123920-71123939 | Msa0995250:CDS | 20.0% |
| !! | AATTGATAAACTAAAAAAGG+AGG | - | chr6_4:71124114-71124133 | Msa0995250:intron | 20.0% |
| !!! | ACTTGTTCACATTTTTTTTA+AGG | - | chr6_4:71124382-71124401 | Msa0995250:CDS | 20.0% |
| !! | GTAATATTTGACTATATTCA+TGG | - | chr6_4:71124538-71124557 | Msa0995250:intron | 20.0% |
| !!! | AATCCTTTTTTTACTAAAAG+TGG | + | chr6_4:71124598-71124617 | None:intergenic | 20.0% |
| !! | GACAATTTATAAAATATGCA+CGG | - | chr6_4:71124780-71124799 | Msa0995250:CDS | 20.0% |
| !! | AAGTTTCTTACTTAATAAGA+TGG | + | chr6_4:71124970-71124989 | None:intergenic | 20.0% |
| !! | ATGGTTGTTTAATATTATTG+TGG | - | chr6_4:71125090-71125109 | Msa0995250:intron | 20.0% |
| !! | ACAAAGACAAAAAATAGTAT+AGG | + | chr6_4:71125594-71125613 | None:intergenic | 20.0% |
| !!! | TGAATTAGAACTTTTTACAA+AGG | - | chr6_4:71125806-71125825 | Msa0995250:CDS | 20.0% |
| !!! | TTGCAATCAAAATGATTTTT+AGG | - | chr6_4:71126090-71126109 | Msa0995250:intron | 20.0% |
| !!! | AATCAAAATGATTTTTAGGT+GGG | - | chr6_4:71126094-71126113 | Msa0995250:intron | 20.0% |
| !! | AGAAGAAATTAGTCAAGTTT+TGG | - | chr6_4:71124231-71124250 | Msa0995250:CDS | 25.0% |
| ! | TACAAGAGTTATGTTCAAAA+TGG | - | chr6_4:71124262-71124281 | Msa0995250:CDS | 25.0% |
| !!! | AGACCACTTTTAGTAAAAAA+AGG | - | chr6_4:71124592-71124611 | Msa0995250:CDS | 25.0% |
| ! | TGCAAGTAGAATTTCATTAT+GGG | + | chr6_4:71125421-71125440 | None:intergenic | 25.0% |
| ! | ATGCAAGTAGAATTTCATTA+TGG | + | chr6_4:71125422-71125441 | None:intergenic | 25.0% |
| ! | TAATGAAATTCTACTTGCAT+TGG | - | chr6_4:71125422-71125441 | Msa0995250:intron | 25.0% |
| !! | TTCCAAATTCTTTTTGATGT+AGG | + | chr6_4:71125476-71125495 | None:intergenic | 25.0% |
| !! | TTTTTGTCTTTGTATATAGG+TGG | - | chr6_4:71125601-71125620 | Msa0995250:intron | 25.0% |
| ! | GTCATCAATGTATGATAAAA+TGG | + | chr6_4:71125760-71125779 | None:intergenic | 25.0% |
| !!! | ATGGTTTTAACTCTAAAGTT+TGG | + | chr6_4:71125889-71125908 | None:intergenic | 25.0% |
| !!! | CAATCAAAATGATTTTTAGG+TGG | - | chr6_4:71126093-71126112 | Msa0995250:intron | 25.0% |
| !!! | ACTCTTACTTCTTTTAAGAA+GGG | + | chr6_4:71126239-71126258 | None:intergenic | 25.0% |
| !!! | AACTCTTACTTCTTTTAAGA+AGG | + | chr6_4:71126240-71126259 | None:intergenic | 25.0% |
| CTTCAATCCTAATGAGAAAT+CGG | - | chr6_4:71123814-71123833 | Msa0995250:CDS | 30.0% | |
| ! | GAATCTGGGATAATATTAAG+TGG | + | chr6_4:71124006-71124025 | None:intergenic | 30.0% |
| AATGTGAGTAACTTGAATCT+GGG | + | chr6_4:71124020-71124039 | None:intergenic | 30.0% | |
| AAATGTGAGTAACTTGAATC+TGG | + | chr6_4:71124021-71124040 | None:intergenic | 30.0% | |
| !! | TGCATGTTTTGAATACATAC+AGG | - | chr6_4:71124066-71124085 | Msa0995250:intron | 30.0% |
| TTAAAAACAGAGAAACCCTT+GGG | - | chr6_4:71124154-71124173 | Msa0995250:intron | 30.0% | |
| ! | CAAGTTGAGATATATATACC+AGG | + | chr6_4:71124367-71124386 | None:intergenic | 30.0% |
| !! | ATGAGTGTCTTTTGTTTGAT+CGG | - | chr6_4:71124667-71124686 | Msa0995250:CDS | 30.0% |
| ATCGGATACATATTAGACAT+CGG | - | chr6_4:71124685-71124704 | Msa0995250:CDS | 30.0% | |
| TTATAAAATATGCACGGTCT+AGG | - | chr6_4:71124786-71124805 | Msa0995250:CDS | 30.0% | |
| TATAAAATATGCACGGTCTA+GGG | - | chr6_4:71124787-71124806 | Msa0995250:CDS | 30.0% | |
| TAATAAGATGGCTACCATAT+GGG | + | chr6_4:71124958-71124977 | None:intergenic | 30.0% | |
| TTAATAAGATGGCTACCATA+TGG | + | chr6_4:71124959-71124978 | None:intergenic | 30.0% | |
| AGGAAATTTCAGTGAAACAT+TGG | - | chr6_4:71125161-71125180 | Msa0995250:intron | 30.0% | |
| ! | GGTTCATGGTGAAAATATTT+TGG | - | chr6_4:71125233-71125252 | Msa0995250:intron | 30.0% |
| !! | TGGTGAAAATATTTTGGAAG+AGG | - | chr6_4:71125239-71125258 | Msa0995250:intron | 30.0% |
| !! | AAATATTTTGGAAGAGGCTT+TGG | - | chr6_4:71125245-71125264 | Msa0995250:intron | 30.0% |
| !! | TTTACTTTTGTTGCAAGAGA+AGG | + | chr6_4:71125315-71125334 | None:intergenic | 30.0% |
| ! | ATTCTTTTTGATGTAGGCTT+TGG | + | chr6_4:71125470-71125489 | None:intergenic | 30.0% |
| AGCCTACATCAAAAAGAATT+TGG | - | chr6_4:71125471-71125490 | Msa0995250:intron | 30.0% | |
| !!! | AGTAGTAGAATGTTGCTTTT+GGG | - | chr6_4:71125671-71125690 | Msa0995250:intron | 30.0% |
| ATATTGGGGCTCAAAATATA+CGG | + | chr6_4:71125703-71125722 | None:intergenic | 30.0% | |
| TTTCCTTGCTTGAGAATATT+GGG | + | chr6_4:71125718-71125737 | None:intergenic | 30.0% | |
| ! | TTTTCCTTGCTTGAGAATAT+TGG | + | chr6_4:71125719-71125738 | None:intergenic | 30.0% |
| ! | TTTTTACAAAGGCCATTGAA+AGG | - | chr6_4:71125817-71125836 | Msa0995250:CDS | 30.0% |
| CTAGTCATCAAGTTTAGATT+TGG | - | chr6_4:71125927-71125946 | Msa0995250:CDS | 30.0% | |
| AATTTAACCATCTCCAATCT+TGG | - | chr6_4:71125971-71125990 | Msa0995250:intron | 30.0% | |
| ATTGAATTAGCAACCAAGAT+TGG | + | chr6_4:71125987-71126006 | None:intergenic | 30.0% | |
| ! | GTTGCTTTATAAATCACTCT+TGG | - | chr6_4:71126154-71126173 | Msa0995250:CDS | 30.0% |
| !! | CTCTTACTTCTTTTAAGAAG+GGG | + | chr6_4:71126238-71126257 | None:intergenic | 30.0% |
| ! | TGCAAAACCGATTTCTCATT+AGG | + | chr6_4:71123824-71123843 | None:intergenic | 35.0% |
| TCAGTATGCTTCAGAATCTA+TGG | - | chr6_4:71123892-71123911 | Msa0995250:CDS | 35.0% | |
| GGAACCTGATATGAATATTG+CGG | - | chr6_4:71124087-71124106 | Msa0995250:intron | 35.0% | |
| CTTAAAAACAGAGAAACCCT+TGG | - | chr6_4:71124153-71124172 | Msa0995250:intron | 35.0% | |
| !!! | ATCAAGTTGACTTTTCCCAA+GGG | + | chr6_4:71124172-71124191 | None:intergenic | 35.0% |
| !!! | AATCAAGTTGACTTTTCCCA+AGG | + | chr6_4:71124173-71124192 | None:intergenic | 35.0% |
| !! | ATTGACTCGATATGTCGTTT+GGG | - | chr6_4:71124190-71124209 | Msa0995250:intron | 35.0% |
| !! | ATTCTCTTGCTGTGCTATTT+AGG | - | chr6_4:71124311-71124330 | Msa0995250:CDS | 35.0% |
| !! | TTCTCTTGCTGTGCTATTTA+GGG | - | chr6_4:71124312-71124331 | Msa0995250:CDS | 35.0% |
| TAAGCTTAACTCAGTTGGTT+TGG | - | chr6_4:71124758-71124777 | Msa0995250:CDS | 35.0% | |
| !!! | TTTTTTTTTTGTGGTGGCCA+GGG | + | chr6_4:71124819-71124838 | None:intergenic | 35.0% |
| !!! | ATTTTTTTTTTGTGGTGGCC+AGG | + | chr6_4:71124820-71124839 | None:intergenic | 35.0% |
| ! | TCTACTTGCATTGGCAAAAT+TGG | - | chr6_4:71125431-71125450 | Msa0995250:intron | 35.0% |
| TTGTCTTTGTATATAGGTGG+TGG | - | chr6_4:71125604-71125623 | Msa0995250:intron | 35.0% | |
| !!! | GAGTAGTAGAATGTTGCTTT+TGG | - | chr6_4:71125670-71125689 | Msa0995250:intron | 35.0% |
| TTCCTTGCTTGAGAATATTG+GGG | + | chr6_4:71125717-71125736 | None:intergenic | 35.0% | |
| GATGACACATATGATGCATA+TGG | - | chr6_4:71125774-71125793 | Msa0995250:CDS | 35.0% | |
| ATGATGTGCTAACCTTTCAA+TGG | + | chr6_4:71125832-71125851 | None:intergenic | 35.0% | |
| TAGGTGGGATATTAATTGCT+TGG | - | chr6_4:71126109-71126128 | Msa0995250:intron | 35.0% | |
| TAAAGCAACTTCGTGTAATC+CGG | + | chr6_4:71126143-71126162 | None:intergenic | 35.0% | |
| GAGCAAGAAATGAAGAAAGA+AGG | - | chr6_4:71126194-71126213 | Msa0995250:CDS | 35.0% | |
| !! | TTCTTTTAAGAAGGGGTCAA+GGG | + | chr6_4:71126231-71126250 | None:intergenic | 35.0% |
| AAAAATCTCCCCAAACGCTA+GGG | + | chr6_4:71123868-71123887 | None:intergenic | 40.0% | |
| AAAAAATCTCCCCAAACGCT+AGG | + | chr6_4:71123869-71123888 | None:intergenic | 40.0% | |
| TGTGCCGCAATATTCATATC+AGG | + | chr6_4:71124094-71124113 | None:intergenic | 40.0% | |
| !! | GATTGACTCGATATGTCGTT+TGG | - | chr6_4:71124189-71124208 | Msa0995250:intron | 40.0% |
| ATAGCACAGCAAGAGAATGA+AGG | + | chr6_4:71124309-71124328 | None:intergenic | 40.0% | |
| CTTAGACCAGTTTACCCATA+TGG | - | chr6_4:71124941-71124960 | Msa0995250:intron | 40.0% | |
| AGACGTGTTCAACCAATTCA+AGG | - | chr6_4:71125131-71125150 | Msa0995250:intron | 40.0% | |
| AACATTGGTCGTAGATGTTG+AGG | - | chr6_4:71125176-71125195 | Msa0995250:intron | 40.0% | |
| ACATTGGTCGTAGATGTTGA+GGG | - | chr6_4:71125177-71125196 | Msa0995250:intron | 40.0% | |
| GTATGAAGCCTCACATATGA+TGG | - | chr6_4:71125212-71125231 | Msa0995250:intron | 40.0% | |
| ACCATGAACCATCATATGTG+AGG | + | chr6_4:71125223-71125242 | None:intergenic | 40.0% | |
| TTGCAAGAGAAGGACTCAAT+CGG | + | chr6_4:71125305-71125324 | None:intergenic | 40.0% | |
| GGATGAATCTTGCTCATAGA+TGG | + | chr6_4:71125400-71125419 | None:intergenic | 40.0% | |
| ! | TTTTTAAATTAGGCAGGGCG+TGG | + | chr6_4:71125522-71125541 | None:intergenic | 40.0% |
| !! | CTTTGTATATAGGTGGTGGA+AGG | - | chr6_4:71125608-71125627 | Msa0995250:intron | 40.0% |
| ACTACTCTATCTCGTGCATA+CGG | + | chr6_4:71125657-71125676 | None:intergenic | 40.0% | |
| TTAGCAACCAAGATTGGAGA+TGG | + | chr6_4:71125981-71126000 | None:intergenic | 40.0% | |
| GTGGGATATTAATTGCTTGG+AGG | - | chr6_4:71126112-71126131 | Msa0995250:intron | 40.0% | |
| TAATTGCTTGGAGGATCTTC+CGG | - | chr6_4:71126121-71126140 | Msa0995250:intron | 40.0% | |
| !! | CTTCTTTTAAGAAGGGGTCA+AGG | + | chr6_4:71126232-71126251 | None:intergenic | 40.0% |
| AGATTTCCACCCTAGCGTTT+GGG | - | chr6_4:71123856-71123875 | Msa0995250:CDS | 45.0% | |
| !! | CTGTGCTATTTAGGGTGTTG+AGG | - | chr6_4:71124320-71124339 | Msa0995250:CDS | 45.0% |
| !! | TTTAGGGTGTTGAGGCAACA+TGG | - | chr6_4:71124328-71124347 | Msa0995250:CDS | 45.0% |
| CATGGACTTTACGTTTCACC+TGG | - | chr6_4:71124346-71124365 | Msa0995250:CDS | 45.0% | |
| CCAACTGAGTTAAGCTTACG+AGG | + | chr6_4:71124756-71124775 | None:intergenic | 45.0% | |
| CCTCGTAAGCTTAACTCAGT+TGG | - | chr6_4:71124753-71124772 | Msa0995250:CDS | 45.0% | |
| TGGCTACCATATGGGTAAAC+TGG | + | chr6_4:71124950-71124969 | None:intergenic | 45.0% | |
| AACCAATTCAAGGACGAGCA+AGG | - | chr6_4:71125141-71125160 | Msa0995250:intron | 45.0% | |
| TTCCTTGCTCGTCCTTGAAT+TGG | + | chr6_4:71125146-71125165 | None:intergenic | 45.0% | |
| GCCTCACATATGATGGTTCA+TGG | - | chr6_4:71125219-71125238 | Msa0995250:intron | 45.0% | |
| !!! | GAGGCTTTGGCTTTTACTTC+TGG | - | chr6_4:71125258-71125277 | Msa0995250:intron | 45.0% |
| TGCAAGAGAAGGACTCAATC+GGG | + | chr6_4:71125304-71125323 | None:intergenic | 45.0% | |
| CAAAAACTTGCCTAGGCTAG+TGG | - | chr6_4:71125359-71125378 | Msa0995250:intron | 45.0% | |
| ! | TAACTTCTTGCCACTAGCCT+AGG | + | chr6_4:71125372-71125391 | None:intergenic | 45.0% |
| !! | ATATAGGTGGTGGAAGGAGT+TGG | - | chr6_4:71125614-71125633 | Msa0995250:intron | 45.0% |
| AGCCCCAATATTCTCAAGCA+AGG | - | chr6_4:71125712-71125731 | Msa0995250:CDS | 45.0% | |
| CAGATTTCCACCCTAGCGTT+TGG | - | chr6_4:71123855-71123874 | Msa0995250:CDS | 50.0% | |
| GATTTCCACCCTAGCGTTTG+GGG | - | chr6_4:71123857-71123876 | Msa0995250:CDS | 50.0% | |
| TTCTGGTCACCTTCAGTCCA+TGG | - | chr6_4:71125275-71125294 | Msa0995250:intron | 50.0% | |
| AAGAGAAGGACTCAATCGGG+TGG | + | chr6_4:71125301-71125320 | None:intergenic | 50.0% | |
| CTCTGCGCAAAAACTTGCCT+AGG | - | chr6_4:71125352-71125371 | Msa0995250:intron | 50.0% | |
| AATCTCCCCAAACGCTAGGG+TGG | + | chr6_4:71123865-71123884 | None:intergenic | 55.0% | |
| ! | ACGGTCTAGGGTTCAAACCC+TGG | - | chr6_4:71124799-71124818 | Msa0995250:CDS | 55.0% |
| ! | ATCGGGTGGCCATGGACTGA+AGG | + | chr6_4:71125287-71125306 | None:intergenic | 60.0% |
| AGGACTCAATCGGGTGGCCA+TGG | + | chr6_4:71125295-71125314 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 71123797 | 71126262 | 71123797 | ID=Msa0995250;Name=Msa0995250 |
| chr6_4 | mRNA | 71123797 | 71126262 | 71123797 | ID=Msa0995250-mRNA-1;Parent=Msa0995250;Name=Msa0995250-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|1|1|5|0|379 |
| chr6_4 | exon | 71126146 | 71126262 | 71126146 | ID=Msa0995250-mRNA-1:exon:13228;Parent=Msa0995250-mRNA-1 |
| chr6_4 | exon | 71125692 | 71125971 | 71125692 | ID=Msa0995250-mRNA-1:exon:13227;Parent=Msa0995250-mRNA-1 |
| chr6_4 | exon | 71124554 | 71124926 | 71124554 | ID=Msa0995250-mRNA-1:exon:13226;Parent=Msa0995250-mRNA-1 |
| chr6_4 | exon | 71124221 | 71124439 | 71124221 | ID=Msa0995250-mRNA-1:exon:13225;Parent=Msa0995250-mRNA-1 |
| chr6_4 | exon | 71123797 | 71123947 | 71123797 | ID=Msa0995250-mRNA-1:exon:13224;Parent=Msa0995250-mRNA-1 |
| chr6_4 | CDS | 71126146 | 71126262 | 71126146 | ID=Msa0995250-mRNA-1:cds;Parent=Msa0995250-mRNA-1 |
| chr6_4 | CDS | 71125692 | 71125971 | 71125692 | ID=Msa0995250-mRNA-1:cds;Parent=Msa0995250-mRNA-1 |
| chr6_4 | CDS | 71124554 | 71124926 | 71124554 | ID=Msa0995250-mRNA-1:cds;Parent=Msa0995250-mRNA-1 |
| chr6_4 | CDS | 71124221 | 71124439 | 71124221 | ID=Msa0995250-mRNA-1:cds;Parent=Msa0995250-mRNA-1 |
| chr6_4 | CDS | 71123797 | 71123947 | 71123797 | ID=Msa0995250-mRNA-1:cds;Parent=Msa0995250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
