AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0797210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0797210 MtrunA17_Chr5g0400411 90.598 117 11 0 16 132 374 490 5.53e-76 233
Msa0797210 MtrunA17_Chr5g0400421 77.778 117 26 0 16 132 375 491 7.10e-65 204
Msa0797210 MtrunA17_Chr5g0400391 98.750 80 1 0 44 123 1 80 6.88e-57 172
Msa0797210 MtrunA17_Chr8g0381541 69.159 107 33 0 26 132 384 490 9.61e-55 178
Msa0797210 MtrunA17_Chr4g0000151 57.265 117 50 0 16 132 27 143 9.53e-51 158
Msa0797210 MtrunA17_Chr2g0293411 65.714 105 36 0 26 130 382 486 3.51e-48 160
Msa0797210 MtrunA17_Chr2g0293421 63.810 105 37 1 26 130 384 487 4.80e-48 160
Msa0797210 MtrunA17_Chr1g0161661 65.169 89 31 0 43 131 12 100 6.06e-44 139
Msa0797210 MtrunA17_Chr8g0339861 53.846 117 54 0 16 132 371 487 6.34e-44 149
Msa0797210 MtrunA17_Chr8g0381561 53.636 110 38 1 6 102 2 111 2.32e-39 128
Msa0797210 MtrunA17_Chr8g0381571 68.831 77 24 0 26 102 384 460 2.03e-36 129
Msa0797210 MtrunA17_Chr1g0161641 61.842 76 29 0 27 102 13 88 1.80e-32 110
Msa0797210 MtrunA17_Chr3g0089351 40.566 106 62 1 26 131 291 395 6.66e-24 94.7
Msa0797210 MtrunA17_Chr3g0089361 44.444 99 54 1 26 124 373 470 2.16e-23 94.0
Msa0797210 MtrunA17_Chr1g0153371 42.157 102 58 1 26 127 365 465 3.87e-23 93.2
Msa0797210 MtrunA17_Chr4g0044851 38.793 116 70 1 16 131 356 470 6.11e-23 92.8
Msa0797210 MtrunA17_Chr8g0369791 44.898 98 53 1 26 123 361 457 7.39e-23 92.4
Msa0797210 MtrunA17_Chr5g0408181 43.878 98 54 1 26 123 359 455 1.04e-21 89.4
Msa0797210 MtrunA17_Chr7g0226771 39.474 114 65 1 1 114 345 454 1.55e-21 89.0
Msa0797210 MtrunA17_Chr5g0404861 39.623 106 60 2 16 119 44 147 6.46e-21 82.8
Msa0797210 MtrunA17_Chr5g0403931 43.810 105 55 2 14 114 360 464 3.16e-20 85.1
Msa0797210 MtrunA17_Chr8g0341951 43.678 87 49 0 16 102 359 445 4.00e-20 84.7
Msa0797210 MtrunA17_Chr8g0372411 40.566 106 59 2 16 119 363 466 8.78e-20 84.0
Msa0797210 MtrunA17_Chr4g0044841 42.697 89 50 1 16 104 357 444 2.13e-19 82.8
Msa0797210 MtrunA17_Chr8g0388921 33.051 118 79 0 11 128 357 474 1.34e-18 80.5
Msa0797210 MtrunA17_Chr5g0443401 40.777 103 60 1 26 128 373 474 4.36e-18 79.0
Msa0797210 MtrunA17_Chr8g0380471 36.634 101 62 2 25 124 370 469 5.52e-18 78.6
Msa0797210 MtrunA17_Chr6g0455461 38.542 96 58 1 26 120 359 454 6.90e-18 78.6
Msa0797210 MtrunA17_Chr6g0463541 38.202 89 54 1 21 109 1 88 1.10e-17 73.2
Msa0797210 MtrunA17_Chr6g0478161 36.937 111 59 4 27 127 380 489 3.20e-17 76.6
Msa0797210 MtrunA17_Chr3g0078411 36.458 96 60 1 26 120 359 454 5.90e-17 75.9
Msa0797210 MtrunA17_Chr7g0219961 36.735 98 59 2 26 121 358 454 6.12e-17 75.9
Msa0797210 MtrunA17_Chr5g0397971 38.202 89 53 1 16 102 354 442 6.24e-17 75.9
Msa0797210 MtrunA17_Chr3g0107501 34.259 108 69 1 16 121 360 467 1.28e-16 74.7
Msa0797210 MtrunA17_Chr1g0164371 41.593 113 65 1 16 128 362 473 2.67e-16 73.9
Msa0797210 MtrunA17_Chr5g0437001 34.884 86 53 1 16 98 23 108 4.55e-16 70.1
Msa0797210 MtrunA17_Chr8g0380931 33.654 104 68 1 26 128 399 502 6.70e-16 72.8
Msa0797210 MtrunA17_Chr3g0113321 40.260 77 41 1 27 98 360 436 2.90e-15 70.9
Msa0797210 MtrunA17_Chr5g0443731 31.731 104 69 2 26 128 366 468 2.90e-15 70.9
Msa0797210 MtrunA17_Chr3g0107511 34.259 108 69 1 16 121 360 467 2.35e-14 68.6
Msa0797210 MtrunA17_Chr1g0161681 34.831 89 29 1 44 132 1 60 7.42e-13 59.3
Msa0797210 MtrunA17_Chr3g0141801 31.034 87 59 1 26 112 379 464 1.61e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0797210 AT2G32440.2 65.455 110 38 0 22 131 378 487 6.21e-50 166
Msa0797210 AT2G32440.1 65.455 110 38 0 22 131 378 487 6.21e-50 166
Msa0797210 AT1G05160.2 62.281 114 42 1 16 128 374 487 1.19e-47 160
Msa0797210 AT1G05160.1 62.281 114 42 1 16 128 374 487 1.19e-47 160
Msa0797210 AT3G19270.2 39.640 111 66 1 16 126 352 461 1.07e-21 89.7
Msa0797210 AT5G45340.1 42.857 98 55 1 26 123 358 454 2.54e-21 88.6
Msa0797210 AT2G29090.3 42.857 105 59 1 27 131 284 387 3.68e-21 87.8
Msa0797210 AT2G29090.2 42.453 106 60 1 26 131 378 482 7.16e-21 87.4
Msa0797210 AT2G29090.1 42.453 106 60 1 26 131 378 482 7.16e-21 87.4
Msa0797210 AT3G44970.1 39.252 107 62 2 14 118 358 463 8.74e-21 87.0
Msa0797210 AT5G36130.1 36.538 104 66 0 6 109 13 116 4.07e-20 80.5
Msa0797210 AT3G19270.1 43.678 87 48 1 16 102 352 437 5.15e-20 84.7
Msa0797210 AT4G19230.1 40.952 105 58 2 26 127 358 461 1.06e-19 84.0
Msa0797210 AT3G13730.2 42.529 87 50 0 16 102 378 464 1.11e-19 84.0
Msa0797210 AT3G13730.1 42.529 87 50 0 16 102 378 464 1.12e-19 84.0
Msa0797210 AT5G14400.1 39.252 107 58 1 15 114 240 346 2.33e-19 82.4
Msa0797210 AT5G14400.2 39.252 107 58 1 15 114 294 400 2.86e-19 82.4
Msa0797210 AT4G36380.1 44.944 89 46 1 16 101 396 484 5.67e-19 82.0
Msa0797210 AT5G45340.2 44.048 84 46 1 26 109 358 440 6.73e-19 81.6
Msa0797210 AT5G14400.3 42.105 95 48 1 15 102 294 388 1.95e-18 80.1
Msa0797210 AT4G19230.2 44.444 81 44 1 26 106 358 437 3.58e-18 79.7
Msa0797210 AT1G12740.2 41.935 93 52 1 16 106 360 452 4.23e-18 79.3
Msa0797210 AT1G78490.1 39.048 105 61 2 26 128 370 473 4.67e-18 79.3
Msa0797210 AT1G12740.4 44.048 84 45 1 25 106 369 452 4.90e-18 79.3
Msa0797210 AT1G12740.1 41.935 93 52 1 16 106 354 446 4.91e-18 79.3
Msa0797210 AT5G36110.1 33.043 115 76 1 16 129 360 474 1.04e-17 78.2
Msa0797210 AT1G19630.1 40.000 90 53 1 23 112 367 455 1.08e-17 78.2
Msa0797210 AT1G55940.2 43.373 83 45 1 27 107 387 469 3.69e-17 76.6
Msa0797210 AT2G42850.1 37.500 96 59 1 26 121 379 473 4.04e-17 76.6
Msa0797210 AT1G19630.3 40.476 84 49 1 23 106 367 449 6.98e-17 75.9
Msa0797210 AT5G05690.3 35.955 89 54 1 16 101 232 320 1.32e-16 74.7
Msa0797210 AT3G50660.1 34.513 113 62 1 14 114 384 496 1.50e-16 75.1
Msa0797210 AT1G55940.1 43.590 78 42 1 26 101 386 463 1.71e-16 74.7
Msa0797210 AT5G05690.1 35.955 89 54 1 16 101 351 439 2.15e-16 74.7
Msa0797210 AT5G48000.2 37.624 101 57 2 26 120 370 470 4.06e-16 73.9
Msa0797210 AT5G48000.4 37.624 101 57 2 26 120 370 470 4.06e-16 73.9
Msa0797210 AT5G48000.7 37.624 101 57 2 26 120 370 470 4.06e-16 73.9
Msa0797210 AT5G48000.6 37.624 101 57 2 26 120 370 470 4.06e-16 73.9
Msa0797210 AT5G48000.5 37.624 101 57 2 26 120 370 470 4.06e-16 73.9
Msa0797210 AT5G48000.3 37.624 101 57 2 26 120 370 470 4.06e-16 73.9
Msa0797210 AT5G48000.1 37.624 101 57 2 26 120 411 511 4.67e-16 73.6
Msa0797210 AT5G38970.1 39.535 86 49 2 26 109 360 444 3.69e-15 71.2
Msa0797210 AT3G30180.1 36.458 96 60 1 26 120 360 455 3.76e-15 70.9
Msa0797210 AT5G38970.2 39.535 86 49 2 26 109 279 363 3.92e-15 70.9
Msa0797210 AT5G38970.4 39.535 86 49 2 26 109 279 363 3.92e-15 70.9
Msa0797210 AT1G73340.1 34.286 105 61 2 22 119 365 468 4.72e-15 70.9
Msa0797210 AT4G15300.1 40.506 79 42 4 27 102 378 454 2.14e-14 68.9
Msa0797210 AT4G15300.2 40.506 79 42 4 27 102 366 442 2.17e-14 68.9
Msa0797210 AT4G15300.3 40.506 79 42 4 27 102 356 432 4.94e-13 65.1
Msa0797210 AT4G15393.2 41.772 79 41 4 27 102 365 441 1.03e-12 63.9
Msa0797210 AT1G65670.1 41.333 75 40 3 26 97 361 434 2.66e-12 62.8
Msa0797210 AT3G30290.1 41.667 84 44 4 22 102 291 372 5.01e-12 62.0
Msa0797210 AT4G15396.1 41.250 80 42 4 26 102 366 443 9.50e-12 61.2
Msa0797210 AT4G15396.3 41.250 80 42 4 26 102 366 443 1.01e-11 61.2
Msa0797210 AT4G15310.1 41.892 74 39 3 27 97 369 441 2.97e-11 60.1

Find 139 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAATTCGTGACCGTTTAT+TGG 0.184789 5_3:+9288189 None:intergenic
TCTCTTCTTGTCGATGTTCT+TGG 0.187292 5_3:-9286170 Msa0797210:three_prime_UTR
AGGATCAGATTTAGCATATT+TGG 0.187502 5_3:+9291133 None:intergenic
AAATCTCCCACCAGGTGATA+TGG 0.250804 5_3:-9291189 Msa0797210:five_prime_UTR
AATGTCTTCGATAACTTCTT+TGG 0.273139 5_3:+9291368 None:intergenic
TGCTGTTCATTGTATTTATA+AGG 0.273484 5_3:-9286057 Msa0797210:three_prime_UTR
GCAATTGGCAGGTAGGTAAT+TGG 0.288195 5_3:+9286290 None:intergenic
TCGATAACTTCTTTGGTTGC+TGG 0.289100 5_3:+9291375 None:intergenic
CACGAATTGTACAATTATAT+TGG 0.295197 5_3:-9288177 Msa0797210:five_prime_UTR
ACCAGGACTTTCCATCCTTT+TGG 0.298640 5_3:+9286780 None:intergenic
GTAGGACAATTTCTTCCATT+TGG 0.303457 5_3:-9286552 Msa0797210:CDS
CAGCACATAGTGTCAACTTT+TGG 0.308516 5_3:+9286075 None:intergenic
CAATTTCTTCCATTTGGATA+TGG 0.311191 5_3:-9286546 Msa0797210:CDS
GAAAGAACAAGAAGAGATTA+TGG 0.317692 5_3:-9287485 Msa0797210:five_prime_UTR
GATATGGGTTGGCCTTTCTT+TGG 0.324788 5_3:-9291173 Msa0797210:five_prime_UTR
AGCCAGGAAGATTGATTGAT+TGG 0.334408 5_3:+9287962 None:intergenic
CTGGAAGGATCAAATTCCTT+TGG 0.338449 5_3:+9286714 None:intergenic
AGGTAGGTAATTGGACAATC+TGG 0.338974 5_3:+9286299 None:intergenic
GCTTCAGCTATGGCACTTGC+AGG 0.351878 5_3:-9288276 Msa0797210:five_prime_UTR
TGGTACTATGTTGGGAGGTT+GGG 0.362799 5_3:-9291221 Msa0797210:five_prime_UTR
CTTCTCACCCTCGTCGTCTC+TGG 0.362903 5_3:+9287714 None:intergenic
ATTCTAGTAGCAGCTTTGTT+AGG 0.373683 5_3:-9291287 Msa0797210:five_prime_UTR
GACTTACACATACGGAAATT+AGG 0.379910 5_3:-9287438 Msa0797210:five_prime_UTR
GGTCATGAAAGCTCTGCTTA+TGG 0.380386 5_3:-9287643 Msa0797210:five_prime_UTR
GGTGGATATGCATTTGTGTT+TGG 0.382341 5_3:-9291266 Msa0797210:five_prime_UTR
TGGAAGGATCAAATTCCTTT+GGG 0.387640 5_3:+9286715 None:intergenic
TTGTACATTGATTTGCTTCG+TGG 0.389356 5_3:-9287994 Msa0797210:five_prime_UTR
TCCCAATCAATCAATCTTCC+TGG 0.389827 5_3:-9287964 Msa0797210:five_prime_UTR
ATGTACAGAACACATTTGTT+TGG 0.390781 5_3:-9288381 Msa0797210:five_prime_UTR
AGATTTGATGGAGTTATTGA+TGG 0.396083 5_3:-9287740 Msa0797210:five_prime_UTR
TATAAAAGTAGCATAAATCT+TGG 0.405233 5_3:-9286237 Msa0797210:exon
TGTACAGAACACATTTGTTT+GGG 0.408565 5_3:-9288380 Msa0797210:five_prime_UTR
TGAACATGCTGACCTTGCTT+TGG 0.409123 5_3:-9288025 Msa0797210:five_prime_UTR
ATGGTACTATGTTGGGAGGT+TGG 0.410290 5_3:-9291222 Msa0797210:five_prime_UTR
AGAAGGCCTTCCGATCAAAA+AGG 0.412567 5_3:-9287460 Msa0797210:five_prime_UTR
TTTGTTTGGGAAAATATAGA+TGG 0.415726 5_3:+9291436 None:intergenic
ACCTTGAGTGCTTTATAGAA+TGG 0.416024 5_3:+9287937 None:intergenic
CATTTGTGTTTGGTTTCCTA+AGG 0.426591 5_3:-9291256 Msa0797210:five_prime_UTR
ACACTATTTGCCACAATTCA+AGG 0.434350 5_3:+9285829 None:intergenic
AGGATCAAATTCCTTTGGGC+TGG 0.434854 5_3:+9286719 None:intergenic
TCCTAAGGAGGTTGAATGAA+TGG 0.438109 5_3:-9291241 Msa0797210:five_prime_UTR
AGTTTAGCCAAATCACTTCC+TGG 0.438956 5_3:+9286510 None:intergenic
AGGTTATAGATGAGGGAGTC+AGG 0.442328 5_3:+9291113 None:intergenic
ATAGCTGAAGCAGGGTATCC+TGG 0.444591 5_3:+9288288 None:intergenic
TTCATTTGCAAACTTTAGAC+AGG 0.450378 5_3:-9287101 Msa0797210:CDS
GTATTGTCCAGGAAGTGATT+TGG 0.450622 5_3:-9286517 Msa0797210:CDS
AGACGACGAGGGTGAGAAGT+TGG 0.458423 5_3:-9287710 Msa0797210:five_prime_UTR
AATCTCCCACCAGGTGATAT+GGG 0.458868 5_3:-9291188 Msa0797210:five_prime_UTR
GCCTCTTTGAGAAACTCAAC+CGG 0.460862 5_3:+9288099 None:intergenic
GCCAGGAAGATTGATTGATT+GGG 0.462555 5_3:+9287963 None:intergenic
TATTATACATACCTCCCATC+TGG 0.462994 5_3:+9286695 None:intergenic
AGAGAGTGATACACTTGAGC+TGG 0.463462 5_3:+9286188 None:intergenic
ATAAAAGTAGCATAAATCTT+GGG 0.464386 5_3:-9286236 Msa0797210:exon
ACCATTCATTCAACCTCCTT+AGG 0.468566 5_3:+9291240 None:intergenic
TGTTTAGGCACGAAAGAAGT+TGG 0.472471 5_3:-9287833 Msa0797210:intron
GGATCAAATTCCTTTGGGCT+GGG 0.474160 5_3:+9286720 None:intergenic
TTATCTGTAGGCCTTGCAAT+TGG 0.475661 5_3:+9286275 None:intergenic
AGTACATTACGACATGTCTC+TGG 0.476052 5_3:+9288333 None:intergenic
CTGCTACTAGAATAAACCAT+TGG 0.479126 5_3:+9291297 None:intergenic
CTGTAGGCCTTGCAATTGGC+AGG 0.479692 5_3:+9286279 None:intergenic
TTCCATTTGGATATGGAAGT+AGG 0.486288 5_3:-9286539 Msa0797210:CDS
TTGAATGAATGGTACTATGT+TGG 0.486848 5_3:-9291230 Msa0797210:five_prime_UTR
TTGTGTTTGGTTTCCTAAGG+AGG 0.490033 5_3:-9291253 Msa0797210:five_prime_UTR
GGTTGCTGGTGTTTATATAG+TGG 0.491925 5_3:+9291389 None:intergenic
TGAATGAATGGTACTATGTT+GGG 0.493202 5_3:-9291229 Msa0797210:five_prime_UTR
TGCTACTAGAATAAACCATT+GGG 0.496765 5_3:+9291298 None:intergenic
GCAAGTGCCATAGCTGAAGC+AGG 0.497827 5_3:+9288279 None:intergenic
GTAACCACGTCTCCAATAAA+CGG 0.501061 5_3:-9288201 Msa0797210:five_prime_UTR
AAATACAGATATGGCAGGAC+AGG 0.507485 5_3:-9288405 Msa0797210:intron
TACCTACTTCCATATCCAAA+TGG 0.510373 5_3:+9286537 None:intergenic
AAGGATGGAAAGTCCTGGTA+TGG 0.511348 5_3:-9286776 Msa0797210:CDS
GCAGGTTATACTATACCAAA+AGG 0.516354 5_3:-9286795 Msa0797210:intron
CTAGTAGCAGCTTTGTTAGG+TGG 0.519370 5_3:-9291284 Msa0797210:five_prime_UTR
GCTCGGCACTTGATATTCCA+TGG 0.522302 5_3:+9288241 None:intergenic
GCAAATGAAATATCTTTCAC+AGG 0.525763 5_3:-9287416 Msa0797210:intron
AGCCACACCTCCTTGAATTG+TGG 0.526100 5_3:-9285839 Msa0797210:three_prime_UTR
GAACACCTCTGTTCCATACC+AGG 0.528264 5_3:+9286763 None:intergenic
GGCGAGCAAACTATGACGGT+TGG 0.529284 5_3:+9288354 None:intergenic
GGTGAAGCTGTTGAAAGGCT+TGG 0.529613 5_3:-9287812 Msa0797210:five_prime_UTR
TCCATTCTATAAAGCACTCA+AGG 0.532313 5_3:-9287938 Msa0797210:intron
GCTTTATAGAATGGAAAGCC+AGG 0.534119 5_3:+9287946 None:intergenic
TGGATGAGTACCTGGAGATA+AGG 0.536681 5_3:+9291093 None:intergenic
AGGATACCCTGCTTCAGCTA+TGG 0.541083 5_3:-9288286 Msa0797210:five_prime_UTR
GACGAGGAACATCTCAAGCC+AGG 0.542274 5_3:-9288306 Msa0797210:five_prime_UTR
TCCCACCAGGTGATATGGGT+TGG 0.542940 5_3:-9291184 Msa0797210:five_prime_UTR
GATCAAATTCCTTTGGGCTG+GGG 0.543256 5_3:+9286721 None:intergenic
CTTTCGCAAACGTTTATGCT+CGG 0.548433 5_3:+9288224 None:intergenic
CAGAATTTCAAAGCAAGAGT+AGG 0.552144 5_3:-9286570 Msa0797210:CDS
ACCAAAAGGATGGAAAGTCC+TGG 0.552950 5_3:-9286781 Msa0797210:CDS
CTTGCAAGACAATTATCTGT+AGG 0.554208 5_3:+9286263 None:intergenic
GTAGGCATGTTACCAAAGAA+AGG 0.554989 5_3:+9291161 None:intergenic
GGTAGGTAATTGGACAATCT+GGG 0.562825 5_3:+9286300 None:intergenic
GTTATACTATACCAAAAGGA+TGG 0.565755 5_3:-9286791 Msa0797210:CDS
TCATCTATAACCTTATCTCC+AGG 0.566054 5_3:-9291103 Msa0797210:intron
AAGTTGGTGAAGCTGTTGAA+AGG 0.567632 5_3:-9287817 Msa0797210:five_prime_UTR
AGGAATTTGATCCTTCCAGA+TGG 0.568464 5_3:-9286710 Msa0797210:CDS
TGGTGTTGCTAGATTCCCAA+TGG 0.570560 5_3:-9291313 Msa0797210:five_prime_UTR
ACCGGTTGAGTTTCTCAAAG+AGG 0.574795 5_3:-9288100 Msa0797210:five_prime_UTR
TATGGAAGTAGGTATTGTCC+AGG 0.575164 5_3:-9286528 Msa0797210:CDS
TAATAAAATACAGATATGGC+AGG 0.578178 5_3:-9288410 Msa0797210:intron
TTGATTTGCTTCGTGGAATG+CGG 0.581058 5_3:-9287987 Msa0797210:five_prime_UTR
AAGAAGAGATTATGGCAAGA+AGG 0.581365 5_3:-9287477 Msa0797210:five_prime_UTR
GGAGATAAGGTTATAGATGA+GGG 0.587720 5_3:+9291106 None:intergenic
GTCAGCATGTTCACGATCAG+AGG 0.587763 5_3:+9288035 None:intergenic
AGTTAAGAAGAAAATGATGA+AGG 0.589321 5_3:+9286472 None:intergenic
TGGAGATAAGGTTATAGATG+AGG 0.590981 5_3:+9291105 None:intergenic
TGCCACAATTCAAGGAGGTG+TGG 0.592195 5_3:+9285837 None:intergenic
GGAATTTGATCCTTCCAGAT+GGG 0.595192 5_3:-9286709 Msa0797210:CDS
TTGGCTCTTTCGAAGACATG+TGG 0.596375 5_3:+9287586 None:intergenic
TTACCTACCTGCCAATTGCA+AGG 0.598956 5_3:-9286286 Msa0797210:CDS
AGGCCTTGCAATTGGCAGGT+AGG 0.603954 5_3:+9286283 None:intergenic
ATGGAACAGAGGTGTTCACA+TGG 0.607440 5_3:-9286757 Msa0797210:CDS
CGAGCATAAACGTTTGCGAA+AGG 0.608994 5_3:-9288223 Msa0797210:five_prime_UTR
TTAGCATATTTGGCGAAGGT+AGG 0.609419 5_3:+9291143 None:intergenic
CTCTGGCGAGCAAACTATGA+CGG 0.610376 5_3:+9288350 None:intergenic
GAGAGTGATACACTTGAGCT+GGG 0.614142 5_3:+9286189 None:intergenic
ATACATACCTCCCATCTGGA+AGG 0.616886 5_3:+9286699 None:intergenic
CTTCAGCTATGGCACTTGCA+GGG 0.617569 5_3:-9288275 Msa0797210:five_prime_UTR
ACATGTCTTCGAAAGAGCCA+AGG 0.617947 5_3:-9287584 Msa0797210:intron
AGATTTAGCATATTTGGCGA+AGG 0.618929 5_3:+9291139 None:intergenic
AAAGGCCAACCCATATCACC+TGG 0.627709 5_3:+9291179 None:intergenic
AATGAAATGACTAACCATTG+AGG 0.633082 5_3:+9287062 None:intergenic
ATTTGATCCTTCCAGATGGG+AGG 0.634847 5_3:-9286706 Msa0797210:intron
GCCAACCCATATCACCTGGT+GGG 0.640214 5_3:+9291183 None:intergenic
TGAAAACTACCCCAGCCCAA+AGG 0.640254 5_3:-9286730 Msa0797210:CDS
CAAGTGCCATAGCTGAAGCA+GGG 0.641376 5_3:+9288280 None:intergenic
GATGGAAGCCAGAGACGACG+AGG 0.644284 5_3:-9287722 Msa0797210:five_prime_UTR
AAATCACAAAATCTCCCACC+AGG 0.644323 5_3:-9291197 Msa0797210:five_prime_UTR
GGCCAACCCATATCACCTGG+TGG 0.659144 5_3:+9291182 None:intergenic
ACATAGGATGTATACAAGAG+TGG 0.662860 5_3:-9291475 None:intergenic
ACAAATGCTCAACCAAAGCA+AGG 0.664047 5_3:+9288013 None:intergenic
GTGACCGTTTATTGGAGACG+TGG 0.664186 5_3:+9288197 None:intergenic
AAAGTCCTGGTATGGAACAG+AGG 0.682312 5_3:-9286768 Msa0797210:CDS
ATGGAAGCCAGAGACGACGA+GGG 0.693270 5_3:-9287721 Msa0797210:five_prime_UTR
ATGAATGGTACTATGTTGGG+AGG 0.696527 5_3:-9291226 Msa0797210:five_prime_UTR
TCGTAATGTACTAAAAGACG+AGG 0.706159 5_3:-9288322 Msa0797210:five_prime_UTR
TTCGTCTAAAACGAACACAC+CGG 0.732992 5_3:-9288118 Msa0797210:five_prime_UTR
AGACATGTGGATGATTAGTG+AGG 0.744858 5_3:+9287599 None:intergenic
CTATTTGCCACAATTCAAGG+AGG 0.755896 5_3:+9285832 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTCTTTTATATTTTAAG+TGG + chr5_3:9288133-9288152 None:intergenic 10.0%
!! AAATTTAATACTAAAATCAT+TGG - chr5_3:9288598-9288617 Msa0797210:intron 10.0%
!! TATTTAATAAAATACAGATA+TGG - chr5_3:9288879-9288898 Msa0797210:intron 10.0%
!!! TTAAAACATCATTTTTATTT+TGG + chr5_3:9290118-9290137 None:intergenic 10.0%
!! TTAATATTGAATTGAAAATT+TGG - chr5_3:9290622-9290641 Msa0797210:intron 10.0%
!! ACGTATTTATTTATATTTCA+AGG + chr5_3:9286251-9286270 None:intergenic 15.0%
!! AATAAAATAATTAATGATGG+TGG - chr5_3:9286722-9286741 Msa0797210:CDS 15.0%
!! AAGATATAGACAAAAAAATA+GGG + chr5_3:9286774-9286793 None:intergenic 15.0%
!! AAAGATATAGACAAAAAAAT+AGG + chr5_3:9286775-9286794 None:intergenic 15.0%
!!! TCTCCATTTATTTTAATAAA+TGG - chr5_3:9286806-9286825 Msa0797210:intron 15.0%
!! TCTCCATTTATTAAAATAAA+TGG + chr5_3:9286812-9286831 None:intergenic 15.0%
!!! ATTTATTTTAATAAATGGAG+AGG - chr5_3:9286811-9286830 Msa0797210:intron 15.0%
!!! TTCTCTTTTTTTTTTTTTGA+AGG - chr5_3:9286989-9287008 Msa0797210:intron 15.0%
!!! AAAATAAACTTTTCGAAAAA+AGG - chr5_3:9288007-9288026 Msa0797210:five_prime_UTR 15.0%
!! AATATAATTAATGAGTAGTT+TGG - chr5_3:9288151-9288170 Msa0797210:five_prime_UTR 15.0%
!!! TATTGAAATGTATTTTTAGT+AGG + chr5_3:9288561-9288580 None:intergenic 15.0%
!! ACTAAAAATACATTTCAATA+TGG - chr5_3:9288561-9288580 Msa0797210:intron 15.0%
!!! ATTTTAGTATTAAATTTGAG+TGG + chr5_3:9288595-9288614 None:intergenic 15.0%
!!! TTTTTTTAAATGTAACTGTA+AGG + chr5_3:9289431-9289450 None:intergenic 15.0%
!! GAAAAGTTAAAATTATGAAA+TGG + chr5_3:9289763-9289782 None:intergenic 15.0%
!!! AAAAAAGTTGATATATTTAG+TGG - chr5_3:9289965-9289984 Msa0797210:intron 15.0%
!!! AACATAGTTATTTTTAATTC+AGG + chr5_3:9290072-9290091 None:intergenic 15.0%
!! TATGATATATTCTACATTAT+AGG - chr5_3:9290138-9290157 Msa0797210:intron 15.0%
!! ACTACTTCATTTATAAAAAA+AGG - chr5_3:9291334-9291353 Msa0797210:five_prime_UTR 15.0%
!! CAAAAAAAACTAGACAAAAA+TGG - chr5_3:9285960-9285979 Msa0797210:three_prime_UTR 20.0%
!! AATTATAGTATACATATGTG+TGG - chr5_3:9286920-9286939 Msa0797210:intron 20.0%
!!! GTGTACATATAATTTTTTGA+AGG - chr5_3:9287031-9287050 Msa0797210:intron 20.0%
!! ATGCAAATATATAGAATTAC+TGG + chr5_3:9287349-9287368 None:intergenic 20.0%
!! TATATGTTTGAAAAAAGTCA+GGG + chr5_3:9287380-9287399 None:intergenic 20.0%
!! ATATATGTTTGAAAAAAGTC+AGG + chr5_3:9287381-9287400 None:intergenic 20.0%
!!! TGAATAATAGTAGTTGTTTT+TGG - chr5_3:9287446-9287465 Msa0797210:five_prime_UTR 20.0%
!! ACTTAATCTAGTAATAACTT+TGG + chr5_3:9287508-9287527 None:intergenic 20.0%
!!! CGTTTTAAAAGAAAGTTAAT+CGG + chr5_3:9287536-9287555 None:intergenic 20.0%
!!! TTGGATCTGTTTTAAAAATT+AGG - chr5_3:9287654-9287673 Msa0797210:five_prime_UTR 20.0%
!!! TGGATCTGTTTTAAAAATTA+GGG - chr5_3:9287655-9287674 Msa0797210:five_prime_UTR 20.0%
!! AAATAGTAGAGATTATTAAC+CGG + chr5_3:9287910-9287929 None:intergenic 20.0%
!! AAAAAGGAGAAGAAAATAAA+AGG - chr5_3:9288023-9288042 Msa0797210:five_prime_UTR 20.0%
!! AAGAAAATAAAAGGATAGAA+AGG - chr5_3:9288032-9288051 Msa0797210:five_prime_UTR 20.0%
!!! AAAAAAATCCTTTTGTGTTT+AGG - chr5_3:9289445-9289464 Msa0797210:intron 20.0%
!!! TAAAATTATGAAATGGATTG+AGG + chr5_3:9289756-9289775 None:intergenic 20.0%
!! TTGTGAAAATAATACTTCTT+CGG + chr5_3:9290039-9290058 None:intergenic 20.0%
!!! ACCTATAAAATTTTACGAAA+TGG - chr5_3:9290384-9290403 Msa0797210:intron 20.0%
!!! TTTTTTTAAATATAAGCGCA+CGG + chr5_3:9290427-9290446 None:intergenic 20.0%
!! TATAAAAGTAGCATAAATCT+TGG - chr5_3:9291056-9291075 Msa0797210:intron 20.0%
!! ATAAAAGTAGCATAAATCTT+GGG - chr5_3:9291057-9291076 Msa0797210:intron 20.0%
!!! TTTTTCTTAATCAAGTAGAA+AGG + chr5_3:9291193-9291212 None:intergenic 20.0%
! TTTGTTTGGGAAAATATAGA+TGG + chr5_3:9285860-9285879 None:intergenic 25.0%
!!! TTGTCATTGTCTTTTTGTTT+GGG + chr5_3:9285873-9285892 None:intergenic 25.0%
! AAGATAATCAACAGAATATG+TGG + chr5_3:9286349-9286368 None:intergenic 25.0%
!! CCATCTTTTTAAATCAAGAT+CGG - chr5_3:9286541-9286560 Msa0797210:CDS 25.0%
! ATATAGACAAAAAAATAGGG+TGG + chr5_3:9286771-9286790 None:intergenic 25.0%
!! ATATAAATAGAGGCACAATA+AGG + chr5_3:9286856-9286875 None:intergenic 25.0%
!!! GTAATTTTTTAAAGTTACCC+TGG + chr5_3:9287325-9287344 None:intergenic 25.0%
! AATCTAGTAATAACTTTGGT+GGG + chr5_3:9287504-9287523 None:intergenic 25.0%
! TAATCTAGTAATAACTTTGG+TGG + chr5_3:9287505-9287524 None:intergenic 25.0%
!!! CTTTCTTTTAAAACGTTTTG+TGG - chr5_3:9287541-9287560 Msa0797210:intron 25.0%
!!! TAGATGAGTTGTTTTATTCT+TGG + chr5_3:9287608-9287627 None:intergenic 25.0%
!!! TTTTAAAAGAAGATTGCTTG+AGG - chr5_3:9287963-9287982 Msa0797210:five_prime_UTR 25.0%
! TTTAAAAGAAGATTGCTTGA+GGG - chr5_3:9287964-9287983 Msa0797210:five_prime_UTR 25.0%
! TAAAAGGATAGAAAGGAATT+TGG - chr5_3:9288039-9288058 Msa0797210:five_prime_UTR 25.0%
! GTGGATAAAAAACAATCTAT+TGG + chr5_3:9288114-9288133 None:intergenic 25.0%
! ATATACAAAGCTTAACATGT+GGG - chr5_3:9288205-9288224 Msa0797210:five_prime_UTR 25.0%
!! TTTTGTGGTCTCAAAAAATA+TGG - chr5_3:9288295-9288314 Msa0797210:five_prime_UTR 25.0%
!! ATATTTTATGTCTCTGTCTT+TGG + chr5_3:9288717-9288736 None:intergenic 25.0%
!! TTTTCTTGAGTAGTATATGT+TGG + chr5_3:9288786-9288805 None:intergenic 25.0%
! TAATAAAATACAGATATGGC+AGG - chr5_3:9288883-9288902 Msa0797210:intron 25.0%
! CACGAATTGTACAATTATAT+TGG - chr5_3:9289116-9289135 Msa0797210:intron 25.0%
!!! ATTAAAGAAGTGTTAAACCT+TGG + chr5_3:9289729-9289748 None:intergenic 25.0%
!!! GAAGAAGTATTATTTTCACA+AGG - chr5_3:9290038-9290057 Msa0797210:intron 25.0%
!!! AAAGTTGATTTTAACCTCAA+TGG - chr5_3:9290217-9290236 Msa0797210:intron 25.0%
! TATCAACGCAGAAAAATATA+TGG + chr5_3:9290257-9290276 None:intergenic 25.0%
!! GCCATTTCGTAAAATTTTAT+AGG + chr5_3:9290388-9290407 None:intergenic 25.0%
! AAACGAAAATGAAAAATTGC+AGG - chr5_3:9290480-9290499 Msa0797210:intron 25.0%
! TGCTGTTCATTGTATTTATA+AGG - chr5_3:9291236-9291255 Msa0797210:five_prime_UTR 25.0%
! GTTGTCATTGTCTTTTTGTT+TGG + chr5_3:9285874-9285893 None:intergenic 30.0%
ACAAAAAGACAATGACAACT+TGG - chr5_3:9285875-9285894 Msa0797210:three_prime_UTR 30.0%
AATGTCTTCGATAACTTCTT+TGG + chr5_3:9285928-9285947 None:intergenic 30.0%
TGCTACTAGAATAAACCATT+GGG + chr5_3:9285998-9286017 None:intergenic 30.0%
TTGAATGAATGGTACTATGT+TGG - chr5_3:9286063-9286082 Msa0797210:three_prime_UTR 30.0%
TGAATGAATGGTACTATGTT+GGG - chr5_3:9286064-9286083 Msa0797210:three_prime_UTR 30.0%
AGGATCAGATTTAGCATATT+TGG + chr5_3:9286163-9286182 None:intergenic 30.0%
ATAATCAACAGAATATGTGG+TGG + chr5_3:9286346-9286365 None:intergenic 30.0%
CCGATCTTGATTTAAAAAGA+TGG + chr5_3:9286544-9286563 None:intergenic 30.0%
TATTAAACTAGTGACCATGT+TGG - chr5_3:9286614-9286633 Msa0797210:intron 30.0%
GAAATGGAGAAGAGATTAAA+TGG + chr5_3:9286665-9286684 None:intergenic 30.0%
TATGTCTATATCTCTCTGAA+TGG + chr5_3:9286690-9286709 None:intergenic 30.0%
GGATGAGTGAATATAAATAG+AGG + chr5_3:9286866-9286885 None:intergenic 30.0%
! TACTATAATTTGTCCCACAT+CGG + chr5_3:9286910-9286929 None:intergenic 30.0%
GACAATTAACTCTTTGAACT+TGG + chr5_3:9287249-9287268 None:intergenic 30.0%
!!! TTTTAAAGTTACCCTGGTTT+AGG + chr5_3:9287319-9287338 None:intergenic 30.0%
!! TAGTTTGCTTGTGCAAATTA+GGG + chr5_3:9287572-9287591 None:intergenic 30.0%
!! ATAGTTTGCTTGTGCAAATT+AGG + chr5_3:9287573-9287592 None:intergenic 30.0%
!! GTTGTTTTATTCTTGGATGT+CGG + chr5_3:9287601-9287620 None:intergenic 30.0%
TGAAAAGAACGATGAAGAAT+AGG - chr5_3:9287880-9287899 Msa0797210:intron 30.0%
! TCTCTTTTTCTTTCACTTCA+TGG - chr5_3:9287930-9287949 Msa0797210:intron 30.0%
GATATACAAAGCTTAACATG+TGG - chr5_3:9288204-9288223 Msa0797210:five_prime_UTR 30.0%
!! TAGCTTGTTAAAGTCTTTCA+TGG - chr5_3:9288249-9288268 Msa0797210:five_prime_UTR 30.0%
!! AGCTTGTTAAAGTCTTTCAT+GGG - chr5_3:9288250-9288269 Msa0797210:five_prime_UTR 30.0%
! AGTGTGATGATATACTTTTG+TGG - chr5_3:9288280-9288299 Msa0797210:five_prime_UTR 30.0%
CATGGTTATAGCAATATACT+CGG - chr5_3:9288362-9288381 Msa0797210:five_prime_UTR 30.0%
AGTAGTATATGTTGGAAGAT+TGG + chr5_3:9288778-9288797 None:intergenic 30.0%
TGCAAAAATGTCTATAGTAC+TGG - chr5_3:9288822-9288841 Msa0797210:intron 30.0%
TAAATGTGACTAACTTTCGA+TGG - chr5_3:9288852-9288871 Msa0797210:intron 30.0%
ATGTACAGAACACATTTGTT+TGG - chr5_3:9288912-9288931 Msa0797210:intron 30.0%
TGTACAGAACACATTTGTTT+GGG - chr5_3:9288913-9288932 Msa0797210:intron 30.0%
! GACATCAAAAGTGAACTTTT+TGG + chr5_3:9289219-9289238 None:intergenic 30.0%
ACAGACGAAAAAAGATTTGA+TGG - chr5_3:9289541-9289560 Msa0797210:intron 30.0%
AGATTTGATGGAGTTATTGA+TGG - chr5_3:9289553-9289572 Msa0797210:intron 30.0%
! TCTTCTTGTTCTTTCTGAAA+GGG + chr5_3:9289803-9289822 None:intergenic 30.0%
GAAAGAACAAGAAGAGATTA+TGG - chr5_3:9289808-9289827 Msa0797210:intron 30.0%
! ATGTGTAAGTCCTTTTTGAT+CGG + chr5_3:9289846-9289865 None:intergenic 30.0%
TCAAAAAGGACTTACACATA+CGG - chr5_3:9289847-9289866 Msa0797210:intron 30.0%
GCAAATGAAATATCTTTCAC+AGG - chr5_3:9289877-9289896 Msa0797210:intron 30.0%
TATGTTTCAACTAAGTTGCA+TGG - chr5_3:9290086-9290105 Msa0797210:intron 30.0%
TTCATTTGCAAACTTTAGAC+AGG - chr5_3:9290192-9290211 Msa0797210:intron 30.0%
AATGAAATGACTAACCATTG+AGG + chr5_3:9290234-9290253 None:intergenic 30.0%
GTTATACTATACCAAAAGGA+TGG - chr5_3:9290502-9290521 Msa0797210:intron 30.0%
CAATTTCTTCCATTTGGATA+TGG - chr5_3:9290747-9290766 Msa0797210:intron 30.0%
AAAAACTACAATCTTAGACG+AGG + chr5_3:9291153-9291172 None:intergenic 30.0%
CTGCTACTAGAATAAACCAT+TGG + chr5_3:9285999-9286018 None:intergenic 35.0%
!! ATTCTAGTAGCAGCTTTGTT+AGG - chr5_3:9286006-9286025 Msa0797210:three_prime_UTR 35.0%
! CATTTGTGTTTGGTTTCCTA+AGG - chr5_3:9286037-9286056 Msa0797210:three_prime_UTR 35.0%
AGATTTAGCATATTTGGCGA+AGG + chr5_3:9286157-9286176 None:intergenic 35.0%
GGAGATAAGGTTATAGATGA+GGG + chr5_3:9286190-9286209 None:intergenic 35.0%
TGGAGATAAGGTTATAGATG+AGG + chr5_3:9286191-9286210 None:intergenic 35.0%
TCATCTATAACCTTATCTCC+AGG - chr5_3:9286190-9286209 Msa0797210:three_prime_UTR 35.0%
! TCTCTGTCTCTATCTTTTCA+TGG - chr5_3:9286307-9286326 Msa0797210:CDS 35.0%
! TATGTGGTGGAGAGAAATAT+TGG + chr5_3:9286333-9286352 None:intergenic 35.0%
TATGGTGAGTGATATTGTGA+CGG + chr5_3:9286388-9286407 None:intergenic 35.0%
ATCTCTCTGAATGGAAGAAA+TGG + chr5_3:9286681-9286700 None:intergenic 35.0%
GGTGGAACTCATTTAACAAT+AGG - chr5_3:9286740-9286759 Msa0797210:CDS 35.0%
GAAGTTTACACACATAAGTG+AGG + chr5_3:9286887-9286906 None:intergenic 35.0%
! ACTATAATTTGTCCCACATC+GGG + chr5_3:9286909-9286928 None:intergenic 35.0%
GAGTTGTATATAGTTCGACT+CGG + chr5_3:9287151-9287170 None:intergenic 35.0%
AAACAGATCCAAAGTGCAAA+AGG + chr5_3:9287646-9287665 None:intergenic 35.0%
TAAAAATTAGGGCTGAGCAT+CGG - chr5_3:9287666-9287685 Msa0797210:five_prime_UTR 35.0%
TTCATCTAGTGTGACGATTT+CGG + chr5_3:9287714-9287733 None:intergenic 35.0%
TTTCACTTCATGGTTACACA+GGG - chr5_3:9287940-9287959 Msa0797210:five_prime_UTR 35.0%
TTAAAGTCTTTCATGGGCAT+TGG - chr5_3:9288256-9288275 Msa0797210:five_prime_UTR 35.0%
AATATGGAAGCTGTAGTGAT+TGG - chr5_3:9288311-9288330 Msa0797210:five_prime_UTR 35.0%
ACTGACTGTAATATAGCAGA+TGG - chr5_3:9288337-9288356 Msa0797210:five_prime_UTR 35.0%
GTTATAGCAATATACTCGGT+CGG - chr5_3:9288366-9288385 Msa0797210:five_prime_UTR 35.0%
!!! CTCATTTTAGTTAAACGGGT+GGG + chr5_3:9288492-9288511 None:intergenic 35.0%
!!! GCTGCTCATTTTAGTTAAAC+GGG + chr5_3:9288496-9288515 None:intergenic 35.0%
!!! CGCTGCTCATTTTAGTTAAA+CGG + chr5_3:9288497-9288516 None:intergenic 35.0%
CGTTTAACTAAAATGAGCAG+CGG - chr5_3:9288495-9288514 Msa0797210:intron 35.0%
!! TTTTTAGTAGGACTGAGCAT+AGG + chr5_3:9288549-9288568 None:intergenic 35.0%
! TCTGTCTTTGGAAAAGTTAG+AGG + chr5_3:9288705-9288724 None:intergenic 35.0%
GATTGGTGGAAAATAAAGAG+TGG + chr5_3:9288761-9288780 None:intergenic 35.0%
AGTATATGTTGGAAGATTGG+TGG + chr5_3:9288775-9288794 None:intergenic 35.0%
TCGTAATGTACTAAAAGACG+AGG - chr5_3:9288971-9288990 Msa0797210:intron 35.0%
TACAATTCGTGACCGTTTAT+TGG + chr5_3:9289107-9289126 None:intergenic 35.0%
!! TTGTACATTGATTTGCTTCG+TGG - chr5_3:9289299-9289318 Msa0797210:intron 35.0%
! TCCATTCTATAAAGCACTCA+AGG - chr5_3:9289355-9289374 Msa0797210:intron 35.0%
ACCTTGAGTGCTTTATAGAA+TGG + chr5_3:9289359-9289378 None:intergenic 35.0%
! CTTCTTTTGTTCTTGTTAGC+TGG - chr5_3:9289629-9289648 Msa0797210:intron 35.0%
CTCTTCTTGTTCTTTCTGAA+AGG + chr5_3:9289804-9289823 None:intergenic 35.0%
AAGAAGAGATTATGGCAAGA+AGG - chr5_3:9289816-9289835 Msa0797210:intron 35.0%
GACTTACACATACGGAAATT+AGG - chr5_3:9289855-9289874 Msa0797210:intron 35.0%
GACTCTGTTCATAAGTAGAA+AGG - chr5_3:9289935-9289954 Msa0797210:intron 35.0%
CTGTTCATAAGTAGAAAGGT+TGG - chr5_3:9289939-9289958 Msa0797210:intron 35.0%
GCAGGTTATACTATACCAAA+AGG - chr5_3:9290498-9290517 Msa0797210:intron 35.0%
TGGAAGGATCAAATTCCTTT+GGG + chr5_3:9290581-9290600 None:intergenic 35.0%
TATTATACATACCTCCCATC+TGG + chr5_3:9290601-9290620 None:intergenic 35.0%
CAGAATTTCAAAGCAAGAGT+AGG - chr5_3:9290723-9290742 Msa0797210:intron 35.0%
GTAGGACAATTTCTTCCATT+TGG - chr5_3:9290741-9290760 Msa0797210:intron 35.0%
TTCCATTTGGATATGGAAGT+AGG - chr5_3:9290754-9290773 Msa0797210:intron 35.0%
TACCTACTTCCATATCCAAA+TGG + chr5_3:9290759-9290778 None:intergenic 35.0%
TGCATGCTTCAATAAGTCAA+TGG + chr5_3:9290880-9290899 None:intergenic 35.0%
TGACTTATTGAAGCATGCAA+AGG - chr5_3:9290881-9290900 Msa0797210:intron 35.0%
TAAGAGAGGCAGAACAAAAT+TGG + chr5_3:9290941-9290960 None:intergenic 35.0%
CACGACAAAAACAATAAGAG+AGG + chr5_3:9290955-9290974 None:intergenic 35.0%
!!! TCTTATTGTTTTTGTCGTGC+AGG - chr5_3:9290956-9290975 Msa0797210:intron 35.0%
CTTGCAAGACAATTATCTGT+AGG + chr5_3:9291033-9291052 None:intergenic 35.0%
! AGCACATAGTGTCAACTTTT+GGG + chr5_3:9291220-9291239 None:intergenic 35.0%
GGTTGCTGGTGTTTATATAG+TGG + chr5_3:9285907-9285926 None:intergenic 40.0%
TCGATAACTTCTTTGGTTGC+TGG + chr5_3:9285921-9285940 None:intergenic 40.0%
GGTGGATATGCATTTGTGTT+TGG - chr5_3:9286027-9286046 Msa0797210:three_prime_UTR 40.0%
! TTGTGTTTGGTTTCCTAAGG+AGG - chr5_3:9286040-9286059 Msa0797210:three_prime_UTR 40.0%
TCCTAAGGAGGTTGAATGAA+TGG - chr5_3:9286052-9286071 Msa0797210:three_prime_UTR 40.0%
ACCATTCATTCAACCTCCTT+AGG + chr5_3:9286056-9286075 None:intergenic 40.0%
ATGAATGGTACTATGTTGGG+AGG - chr5_3:9286067-9286086 Msa0797210:three_prime_UTR 40.0%
AAATCACAAAATCTCCCACC+AGG - chr5_3:9286096-9286115 Msa0797210:three_prime_UTR 40.0%
GTAGGCATGTTACCAAAGAA+AGG + chr5_3:9286135-9286154 None:intergenic 40.0%
TTAGCATATTTGGCGAAGGT+AGG + chr5_3:9286153-9286172 None:intergenic 40.0%
GTACTCATCCATCTATGGTT+CGG - chr5_3:9286212-9286231 Msa0797210:three_prime_UTR 40.0%
TAGATGAACCGAACCATAGA+TGG + chr5_3:9286223-9286242 None:intergenic 40.0%
!! ATATTGTGACGGGTATAGGT+TGG + chr5_3:9286377-9286396 None:intergenic 40.0%
!! AGTGATATTGTGACGGGTAT+AGG + chr5_3:9286381-9286400 None:intergenic 40.0%
ATGGTGAGTGATATTGTGAC+GGG + chr5_3:9286387-9286406 None:intergenic 40.0%
TCACCATATCTACACTACCA+AGG - chr5_3:9286400-9286419 Msa0797210:intron 40.0%
CACCATATCTACACTACCAA+GGG - chr5_3:9286401-9286420 Msa0797210:intron 40.0%
ACTCTTTCTTCAGACCAACA+TGG + chr5_3:9286631-9286650 None:intergenic 40.0%
GGAGAAGAGATTAAATGGAG+AGG + chr5_3:9286660-9286679 None:intergenic 40.0%
!! TGTATATAGTTCGACTCGGT+TGG + chr5_3:9287147-9287166 None:intergenic 40.0%
GAACCAACTCGACAATAGTT+CGG + chr5_3:9287282-9287301 None:intergenic 40.0%
!! GAACTATTGTCGAGTTGGTT+CGG - chr5_3:9287281-9287300 Msa0797210:intron 40.0%
TTCATTGTCAGTCCTAAACC+AGG - chr5_3:9287304-9287323 Msa0797210:intron 40.0%
TCATTGTCAGTCCTAAACCA+GGG - chr5_3:9287305-9287324 Msa0797210:intron 40.0%
TCATCTAGTGTGACGATTTC+GGG + chr5_3:9287713-9287732 None:intergenic 40.0%
TCACACTAGATGAAACCGAA+GGG - chr5_3:9287720-9287739 Msa0797210:five_prime_UTR 40.0%
CAATCGGTTATGAGTTTCTC+AGG - chr5_3:9287831-9287850 Msa0797210:intron 40.0%
ACGATGAAGAATAGGCTTTC+CGG - chr5_3:9287888-9287907 Msa0797210:intron 40.0%
CTTTCACTTCATGGTTACAC+AGG - chr5_3:9287939-9287958 Msa0797210:five_prime_UTR 40.0%
GTAATATAGCAGATGGCACA+TGG - chr5_3:9288344-9288363 Msa0797210:five_prime_UTR 40.0%
! TTCCTGATTTGAGAACCCAT+CGG + chr5_3:9288401-9288420 None:intergenic 40.0%
CGATTCCATTCAGTTACCAA+CGG + chr5_3:9288434-9288453 None:intergenic 40.0%
!! TTTTAGTTAAACGGGTGGGT+GGG + chr5_3:9288488-9288507 None:intergenic 40.0%
!!! ATTTTAGTTAAACGGGTGGG+TGG + chr5_3:9288489-9288508 None:intergenic 40.0%
!!! GCTCATTTTAGTTAAACGGG+TGG + chr5_3:9288493-9288512 None:intergenic 40.0%
AAAATGAGCAGCGGTTTAGA+CGG - chr5_3:9288504-9288523 Msa0797210:intron 40.0%
AAATACAGATATGGCAGGAC+AGG - chr5_3:9288888-9288907 Msa0797210:intron 40.0%
AGTACATTACGACATGTCTC+TGG + chr5_3:9288963-9288982 None:intergenic 40.0%
GCAGGGAAAAAATCATTCCA+TGG - chr5_3:9289035-9289054 Msa0797210:intron 40.0%
CTTTCGCAAACGTTTATGCT+CGG + chr5_3:9289072-9289091 None:intergenic 40.0%
GTAACCACGTCTCCAATAAA+CGG - chr5_3:9289092-9289111 Msa0797210:intron 40.0%
! TTCGTCTAAAACGAACACAC+CGG - chr5_3:9289175-9289194 Msa0797210:intron 40.0%
ACAAATGCTCAACCAAAGCA+AGG + chr5_3:9289283-9289302 None:intergenic 40.0%
!! TTGATTTGCTTCGTGGAATG+CGG - chr5_3:9289306-9289325 Msa0797210:intron 40.0%
TCCCAATCAATCAATCTTCC+TGG - chr5_3:9289329-9289348 Msa0797210:intron 40.0%
GCCAGGAAGATTGATTGATT+GGG + chr5_3:9289333-9289352 None:intergenic 40.0%
AGCCAGGAAGATTGATTGAT+TGG + chr5_3:9289334-9289353 None:intergenic 40.0%
GCTTTATAGAATGGAAAGCC+AGG + chr5_3:9289350-9289369 None:intergenic 40.0%
CTTTCGTGCCTAAACACAAA+AGG + chr5_3:9289456-9289475 None:intergenic 40.0%
TGTTTAGGCACGAAAGAAGT+TGG - chr5_3:9289460-9289479 Msa0797210:intron 40.0%
!! AAGTTGGTGAAGCTGTTGAA+AGG - chr5_3:9289476-9289495 Msa0797210:intron 40.0%
! GCTCTGCTTATGGAGTTTTA+TGG - chr5_3:9289660-9289679 Msa0797210:intron 40.0%
AGACATGTGGATGATTAGTG+AGG + chr5_3:9289697-9289716 None:intergenic 40.0%
! GTAAGTCCTTTTTGATCGGA+AGG + chr5_3:9289842-9289861 None:intergenic 40.0%
ATCTTTCACAGGTATGCGAT+AGG - chr5_3:9289888-9289907 Msa0797210:intron 40.0%
ACAATTCCCTAGCATGGTTT+CGG - chr5_3:9290292-9290311 Msa0797210:intron 40.0%
CTGGAAGGATCAAATTCCTT+TGG + chr5_3:9290582-9290601 None:intergenic 40.0%
AGGAATTTGATCCTTCCAGA+TGG - chr5_3:9290583-9290602 Msa0797210:intron 40.0%
GGAATTTGATCCTTCCAGAT+GGG - chr5_3:9290584-9290603 Msa0797210:intron 40.0%
! TATGGAAGTAGGTATTGTCC+AGG - chr5_3:9290765-9290784 Msa0797210:intron 40.0%
GTATTGTCCAGGAAGTGATT+TGG - chr5_3:9290776-9290795 Msa0797210:intron 40.0%
AGTTTAGCCAAATCACTTCC+TGG + chr5_3:9290786-9290805 None:intergenic 40.0%
!!! ATTGTTTTTGTCGTGCAGGA+TGG - chr5_3:9290960-9290979 Msa0797210:intron 40.0%
GGTAGGTAATTGGACAATCT+GGG + chr5_3:9290996-9291015 None:intergenic 40.0%
AGGTAGGTAATTGGACAATC+TGG + chr5_3:9290997-9291016 None:intergenic 40.0%
TTATCTGTAGGCCTTGCAAT+TGG + chr5_3:9291021-9291040 None:intergenic 40.0%
TCTCTTCTTGTCGATGTTCT+TGG - chr5_3:9291123-9291142 Msa0797210:five_prime_UTR 40.0%
! CAGCACATAGTGTCAACTTT+TGG + chr5_3:9291221-9291240 None:intergenic 40.0%
TGTGGCTGAAAAATAGGAAG+TGG + chr5_3:9291441-9291460 None:intergenic 40.0%
CTATTTGCCACAATTCAAGG+AGG + chr5_3:9291464-9291483 None:intergenic 40.0%
!! TGGTGTTGCTAGATTCCCAA+TGG - chr5_3:9285980-9285999 Msa0797210:three_prime_UTR 45.0%
!! CTAGTAGCAGCTTTGTTAGG+TGG - chr5_3:9286009-9286028 Msa0797210:three_prime_UTR 45.0%
ATGGTACTATGTTGGGAGGT+TGG - chr5_3:9286071-9286090 Msa0797210:three_prime_UTR 45.0%
TGGTACTATGTTGGGAGGTT+GGG - chr5_3:9286072-9286091 Msa0797210:three_prime_UTR 45.0%
AAATCTCCCACCAGGTGATA+TGG - chr5_3:9286104-9286123 Msa0797210:three_prime_UTR 45.0%
AATCTCCCACCAGGTGATAT+GGG - chr5_3:9286105-9286124 Msa0797210:three_prime_UTR 45.0%
!! GATATGGGTTGGCCTTTCTT+TGG - chr5_3:9286120-9286139 Msa0797210:three_prime_UTR 45.0%
AGGTTATAGATGAGGGAGTC+AGG + chr5_3:9286183-9286202 None:intergenic 45.0%
TGGATGAGTACCTGGAGATA+AGG + chr5_3:9286203-9286222 None:intergenic 45.0%
TCCAGGTACTCATCCATCTA+TGG - chr5_3:9286207-9286226 Msa0797210:three_prime_UTR 45.0%
ACCATAGATGGATGAGTACC+TGG + chr5_3:9286211-9286230 None:intergenic 45.0%
CATATCTACACTACCAAGGG+CGG - chr5_3:9286404-9286423 Msa0797210:intron 45.0%
TGTGTGTAAACTTCCCGATG+TGG - chr5_3:9286893-9286912 Msa0797210:intron 45.0%
GTGTGTAAACTTCCCGATGT+GGG - chr5_3:9286894-9286913 Msa0797210:intron 45.0%
TCAGCTCAAGTTCAGCTCAT+TGG - chr5_3:9287215-9287234 Msa0797210:intron 45.0%
GTTCCGAACTATTGTCGAGT+TGG - chr5_3:9287276-9287295 Msa0797210:intron 45.0%
GTCACACTAGATGAAACCGA+AGG - chr5_3:9287719-9287738 Msa0797210:five_prime_UTR 45.0%
!!! GGTTCTGGATTTTGTCCCTT+CGG + chr5_3:9287738-9287757 None:intergenic 45.0%
! CATATGGTCGGAATTGGTTC+TGG + chr5_3:9287753-9287772 None:intergenic 45.0%
GCACAACATATGGTCGGAAT+TGG + chr5_3:9287759-9287778 None:intergenic 45.0%
TTCCGACCATATGTTGTGCT+CGG - chr5_3:9287760-9287779 Msa0797210:five_prime_UTR 45.0%
AACCGAGCACAACATATGGT+CGG + chr5_3:9287765-9287784 None:intergenic 45.0%
CGTAAACCGAGCACAACATA+TGG + chr5_3:9287769-9287788 None:intergenic 45.0%
TATGTTGTGCTCGGTTTACG+CGG - chr5_3:9287769-9287788 Msa0797210:five_prime_UTR 45.0%
! TTCGGTTTGAACGGGTATAC+AGG - chr5_3:9287793-9287812 Msa0797210:five_prime_UTR 45.0%
GAACGGGTATACAGGTTGTT+CGG - chr5_3:9287801-9287820 Msa0797210:five_prime_UTR 45.0%
GGTATACAGGTTGTTCGGAT+GGG - chr5_3:9287806-9287825 Msa0797210:five_prime_UTR 45.0%
! GTTGTTCGGATGGGTTCAAT+CGG - chr5_3:9287815-9287834 Msa0797210:five_prime_UTR 45.0%
! CTTGAGGGCTTTTCGAAAGA+AGG - chr5_3:9287979-9287998 Msa0797210:five_prime_UTR 45.0%
CAATATACTCGGTCGGTTGT+GGG - chr5_3:9288373-9288392 Msa0797210:five_prime_UTR 45.0%
! TACCGATGGGTTCTCAAATC+AGG - chr5_3:9288396-9288415 Msa0797210:five_prime_UTR 45.0%
TCCATTCAGTTACCAACGGT+CGG + chr5_3:9288430-9288449 None:intergenic 45.0%
TTTAGTTAAACGGGTGGGTG+GGG + chr5_3:9288487-9288506 None:intergenic 45.0%
AAATGAGCAGCGGTTTAGAC+GGG - chr5_3:9288505-9288524 Msa0797210:intron 45.0%
CGGTCATAGTAGCACATTTG+AGG + chr5_3:9288632-9288651 None:intergenic 45.0%
CTACTATGACCGCCTTACTA+TGG - chr5_3:9288640-9288659 Msa0797210:intron 45.0%
ATCGCAGTACCATAGTAAGG+CGG + chr5_3:9288652-9288671 None:intergenic 45.0%
GTGATCGCAGTACCATAGTA+AGG + chr5_3:9288655-9288674 None:intergenic 45.0%
CGAGCATAAACGTTTGCGAA+AGG - chr5_3:9289070-9289089 Msa0797210:intron 45.0%
ACCGGTTGAGTTTCTCAAAG+AGG - chr5_3:9289193-9289212 Msa0797210:intron 45.0%
! GCCTCTTTGAGAAACTCAAC+CGG + chr5_3:9289197-9289216 None:intergenic 45.0%
TGAACATGCTGACCTTGCTT+TGG - chr5_3:9289268-9289287 Msa0797210:intron 45.0%
GGTCATGAAAGCTCTGCTTA+TGG - chr5_3:9289650-9289669 Msa0797210:intron 45.0%
! TTGGCTCTTTCGAAGACATG+TGG + chr5_3:9289710-9289729 None:intergenic 45.0%
ACATGTCTTCGAAAGAGCCA+AGG - chr5_3:9289709-9289728 Msa0797210:intron 45.0%
AGAAGGCCTTCCGATCAAAA+AGG - chr5_3:9289833-9289852 Msa0797210:intron 45.0%
TCCATGACAATTCCCTAGCA+TGG - chr5_3:9290286-9290305 Msa0797210:intron 45.0%
ACCATGCTAGGGAATTGTCA+TGG + chr5_3:9290290-9290309 None:intergenic 45.0%
ACCAAAAGGATGGAAAGTCC+TGG - chr5_3:9290512-9290531 Msa0797210:intron 45.0%
! ACCAGGACTTTCCATCCTTT+TGG + chr5_3:9290516-9290535 None:intergenic 45.0%
AAGGATGGAAAGTCCTGGTA+TGG - chr5_3:9290517-9290536 Msa0797210:intron 45.0%
AAAGTCCTGGTATGGAACAG+AGG - chr5_3:9290525-9290544 Msa0797210:intron 45.0%
!! ATGGAACAGAGGTGTTCACA+TGG - chr5_3:9290536-9290555 Msa0797210:intron 45.0%
GATCAAATTCCTTTGGGCTG+GGG + chr5_3:9290575-9290594 None:intergenic 45.0%
GGATCAAATTCCTTTGGGCT+GGG + chr5_3:9290576-9290595 None:intergenic 45.0%
AGGATCAAATTCCTTTGGGC+TGG + chr5_3:9290577-9290596 None:intergenic 45.0%
ATTTGATCCTTCCAGATGGG+AGG - chr5_3:9290587-9290606 Msa0797210:intron 45.0%
ATACATACCTCCCATCTGGA+AGG + chr5_3:9290597-9290616 None:intergenic 45.0%
GCAATTGGCAGGTAGGTAAT+TGG + chr5_3:9291006-9291025 None:intergenic 45.0%
TTACCTACCTGCCAATTGCA+AGG - chr5_3:9291007-9291026 Msa0797210:intron 45.0%
GAGAGTGATACACTTGAGCT+GGG + chr5_3:9291107-9291126 None:intergenic 45.0%
AGAGAGTGATACACTTGAGC+TGG + chr5_3:9291108-9291127 None:intergenic 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG + chr5_3:9291447-9291466 None:intergenic 45.0%
!! AAAAATAAAATAATTAATGA+TGG - chr5_3:9286719-9286738 Msa0797210:CDS 5.0%
!! TGTTAATTAAATTAAATAAA+TGG + chr5_3:9290665-9290684 None:intergenic 5.0%
AAAGGCCAACCCATATCACC+TGG + chr5_3:9286117-9286136 None:intergenic 50.0%
!! CGCCCTTGGTAGTGTAGATA+TGG + chr5_3:9286406-9286425 None:intergenic 50.0%
ATCCGGTGTCTAATCAGGGT+AGG - chr5_3:9286427-9286446 Msa0797210:intron 50.0%
TCCGGTGTCTAATCAGGGTA+GGG - chr5_3:9286428-9286447 Msa0797210:intron 50.0%
! CTCGACGTCCTTTTGCACTT+TGG - chr5_3:9287635-9287654 Msa0797210:five_prime_UTR 50.0%
!! AATTAGGGCTGAGCATCGGA+CGG - chr5_3:9287670-9287689 Msa0797210:five_prime_UTR 50.0%
ATGTTGTGCTCGGTTTACGC+GGG - chr5_3:9287770-9287789 Msa0797210:five_prime_UTR 50.0%
! TTACGCGGGTTCGGTTTGAA+CGG - chr5_3:9287784-9287803 Msa0797210:five_prime_UTR 50.0%
GGGTATACAGGTTGTTCGGA+TGG - chr5_3:9287805-9287824 Msa0797210:five_prime_UTR 50.0%
GCAATATACTCGGTCGGTTG+TGG - chr5_3:9288372-9288391 Msa0797210:five_prime_UTR 50.0%
!! ACCGACCGTTGGTAACTGAA+TGG - chr5_3:9288426-9288445 Msa0797210:intron 50.0%
!! CAGCGGTTTAGACGGGTTAT+GGG - chr5_3:9288512-9288531 Msa0797210:intron 50.0%
CTCTGGCGAGCAAACTATGA+CGG + chr5_3:9288946-9288965 None:intergenic 50.0%
! ATAGCTGAAGCAGGGTATCC+TGG + chr5_3:9289008-9289027 None:intergenic 50.0%
AGGATACCCTGCTTCAGCTA+TGG - chr5_3:9289007-9289026 Msa0797210:intron 50.0%
CAAGTGCCATAGCTGAAGCA+GGG + chr5_3:9289016-9289035 None:intergenic 50.0%
CTTCAGCTATGGCACTTGCA+GGG - chr5_3:9289018-9289037 Msa0797210:intron 50.0%
GCTCGGCACTTGATATTCCA+TGG + chr5_3:9289055-9289074 None:intergenic 50.0%
GTGACCGTTTATTGGAGACG+TGG + chr5_3:9289099-9289118 None:intergenic 50.0%
GTCAGCATGTTCACGATCAG+AGG + chr5_3:9289261-9289280 None:intergenic 50.0%
GGTGAAGCTGTTGAAAGGCT+TGG - chr5_3:9289481-9289500 Msa0797210:intron 50.0%
GAACACCTCTGTTCCATACC+AGG + chr5_3:9290533-9290552 None:intergenic 50.0%
!! TTTGGGCTGGGGTAGTTTTC+AGG + chr5_3:9290564-9290583 None:intergenic 50.0%
TGAAAACTACCCCAGCCCAA+AGG - chr5_3:9290563-9290582 Msa0797210:intron 50.0%
AGCCACACCTCCTTGAATTG+TGG - chr5_3:9291454-9291473 Msa0797210:five_prime_UTR 50.0%
TGCCACAATTCAAGGAGGTG+TGG + chr5_3:9291459-9291478 None:intergenic 50.0%
TCCCACCAGGTGATATGGGT+TGG - chr5_3:9286109-9286128 Msa0797210:three_prime_UTR 55.0%
GCCAACCCATATCACCTGGT+GGG + chr5_3:9286113-9286132 None:intergenic 55.0%
TACACTACCAAGGGCGGATC+CGG - chr5_3:9286410-9286429 Msa0797210:intron 55.0%
GCGGATCCGGTGTCTAATCA+GGG - chr5_3:9286423-9286442 Msa0797210:intron 55.0%
GCCCTACCCTGATTAGACAC+CGG + chr5_3:9286432-9286451 None:intergenic 55.0%
GTGTCTAATCAGGGTAGGGC+TGG - chr5_3:9286432-9286451 Msa0797210:intron 55.0%
! TACGCGGGTTCGGTTTGAAC+GGG - chr5_3:9287785-9287804 Msa0797210:five_prime_UTR 55.0%
CAGTTACCAACGGTCGGTTG+CGG + chr5_3:9288424-9288443 None:intergenic 55.0%
!! GCAGCGGTTTAGACGGGTTA+TGG - chr5_3:9288511-9288530 Msa0797210:intron 55.0%
!! CGGTTTAGACGGGTTATGGG+CGG - chr5_3:9288515-9288534 Msa0797210:intron 55.0%
!! GGTTTAGACGGGTTATGGGC+GGG - chr5_3:9288516-9288535 Msa0797210:intron 55.0%
GGCGAGCAAACTATGACGGT+TGG + chr5_3:9288942-9288961 None:intergenic 55.0%
GACGAGGAACATCTCAAGCC+AGG - chr5_3:9288987-9289006 Msa0797210:intron 55.0%
GCAAGTGCCATAGCTGAAGC+AGG + chr5_3:9289017-9289036 None:intergenic 55.0%
GCTTCAGCTATGGCACTTGC+AGG - chr5_3:9289017-9289036 Msa0797210:intron 55.0%
ATGGAAGCCAGAGACGACGA+GGG - chr5_3:9289572-9289591 Msa0797210:intron 55.0%
AGACGACGAGGGTGAGAAGT+TGG - chr5_3:9289583-9289602 Msa0797210:intron 55.0%
CTGCGACCGAAACCATGCTA+GGG + chr5_3:9290301-9290320 None:intergenic 55.0%
ACTGCGACCGAAACCATGCT+AGG + chr5_3:9290302-9290321 None:intergenic 55.0%
AGGCCTTGCAATTGGCAGGT+AGG + chr5_3:9291013-9291032 None:intergenic 55.0%
CTGTAGGCCTTGCAATTGGC+AGG + chr5_3:9291017-9291036 None:intergenic 55.0%
GGCCAACCCATATCACCTGG+TGG + chr5_3:9286114-9286133 None:intergenic 60.0%
TTAGACACCGGATCCGCCCT+TGG + chr5_3:9286420-9286439 None:intergenic 60.0%
GGCGGATCCGGTGTCTAATC+AGG - chr5_3:9286422-9286441 Msa0797210:intron 60.0%
!! GCTGAGCATCGGACGGTTTC+AGG - chr5_3:9287677-9287696 Msa0797210:five_prime_UTR 60.0%
!! GAGCATCGGACGGTTTCAGG+CGG - chr5_3:9287680-9287699 Msa0797210:five_prime_UTR 60.0%
! AGCATCGGACGGTTTCAGGC+GGG - chr5_3:9287681-9287700 Msa0797210:five_prime_UTR 60.0%
GTGCTCGGTTTACGCGGGTT+CGG - chr5_3:9287775-9287794 Msa0797210:five_prime_UTR 60.0%
!! GGTCGGTTGTGGGTACCGAT+GGG - chr5_3:9288383-9288402 Msa0797210:five_prime_UTR 60.0%
GTTAAACGGGTGGGTGGGGT+CGG + chr5_3:9288483-9288502 None:intergenic 60.0%
!! AGACGGGTTATGGGCGGGTT+CGG - chr5_3:9288521-9288540 Msa0797210:intron 60.0%
GATGGAAGCCAGAGACGACG+AGG - chr5_3:9289571-9289590 Msa0797210:intron 60.0%
CTTCTCACCCTCGTCGTCTC+TGG + chr5_3:9289582-9289601 None:intergenic 60.0%
! CGGACGGTTTCAGGCGGGTT+CGG - chr5_3:9287686-9287705 Msa0797210:five_prime_UTR 65.0%
! GGACGGTTTCAGGCGGGTTC+GGG - chr5_3:9287687-9287706 Msa0797210:five_prime_UTR 65.0%
!! CGGTCGGTTGTGGGTACCGA+TGG - chr5_3:9288382-9288401 Msa0797210:five_prime_UTR 65.0%
CAGGAACCGCAACCGACCGT+TGG - chr5_3:9288415-9288434 Msa0797210:intron 65.0%
GGTGGGTGGGGTCGGCTGTC+GGG + chr5_3:9288475-9288494 None:intergenic 75.0%
GGGTGGGTGGGGTCGGCTGT+CGG + chr5_3:9288476-9288495 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 9285832 9291483 9285832 ID=Msa0797210;Name=Msa0797210
chr5_3 mRNA 9285832 9291483 9285832 ID=Msa0797210-mRNA-1;Parent=Msa0797210;Name=Msa0797210-mRNA-1;_AED=0.11;_eAED=0.11;_QI=1222|0.85|1|1|1|0.87|8|412|132
chr5_3 exon 9285832 9286337 9285832 ID=Msa0797210-mRNA-1:exon:4087;Parent=Msa0797210-mRNA-1
chr5_3 exon 9286468 9286589 9286468 ID=Msa0797210-mRNA-1:exon:4086;Parent=Msa0797210-mRNA-1
chr5_3 exon 9286707 9286813 9286707 ID=Msa0797210-mRNA-1:exon:4085;Parent=Msa0797210-mRNA-1
chr5_3 exon 9287073 9287155 9287073 ID=Msa0797210-mRNA-1:exon:4084;Parent=Msa0797210-mRNA-1
chr5_3 exon 9287417 9287506 9287417 ID=Msa0797210-mRNA-1:exon:4083;Parent=Msa0797210-mRNA-1
chr5_3 exon 9287585 9287848 9287585 ID=Msa0797210-mRNA-1:exon:4082;Parent=Msa0797210-mRNA-1
chr5_3 exon 9287939 9288419 9287939 ID=Msa0797210-mRNA-1:exon:4081;Parent=Msa0797210-mRNA-1
chr5_3 exon 9291104 9291483 9291104 ID=Msa0797210-mRNA-1:exon:4080;Parent=Msa0797210-mRNA-1
chr5_3 five_prime_UTR 9291104 9291483 9291104 ID=Msa0797210-mRNA-1:five_prime_utr;Parent=Msa0797210-mRNA-1
chr5_3 five_prime_UTR 9287939 9288419 9287939 ID=Msa0797210-mRNA-1:five_prime_utr;Parent=Msa0797210-mRNA-1
chr5_3 five_prime_UTR 9287585 9287848 9287585 ID=Msa0797210-mRNA-1:five_prime_utr;Parent=Msa0797210-mRNA-1
chr5_3 five_prime_UTR 9287417 9287506 9287417 ID=Msa0797210-mRNA-1:five_prime_utr;Parent=Msa0797210-mRNA-1
chr5_3 five_prime_UTR 9287149 9287155 9287149 ID=Msa0797210-mRNA-1:five_prime_utr;Parent=Msa0797210-mRNA-1
chr5_3 CDS 9287073 9287148 9287073 ID=Msa0797210-mRNA-1:cds;Parent=Msa0797210-mRNA-1
chr5_3 CDS 9286707 9286813 9286707 ID=Msa0797210-mRNA-1:cds;Parent=Msa0797210-mRNA-1
chr5_3 CDS 9286468 9286589 9286468 ID=Msa0797210-mRNA-1:cds;Parent=Msa0797210-mRNA-1
chr5_3 CDS 9286244 9286337 9286244 ID=Msa0797210-mRNA-1:cds;Parent=Msa0797210-mRNA-1
chr5_3 three_prime_UTR 9285832 9286243 9285832 ID=Msa0797210-mRNA-1:three_prime_utr;Parent=Msa0797210-mRNA-1
Gene Sequence

>Msa0797210

ATGAGATGCTGCGCAAGACAAGTATTTCATTTGCAAACTTTAGACAGGCAAAAGTTGATTTTAACCTCAATGGTTAGTTATACTATACCAAAAGGATGGAAAGTCCTGGTATGGAACAGAGGTGTTCACATGGATCCTGAAAACTACCCCAGCCCAAAGGAATTTGATCCTTCCAGATGGGAGAATTTCAAAGCAAGAGTAGGACAATTTCTTCCATTTGGATATGGAAGTAGGTATTGTCCAGGAAGTGATTTGGCTAAACTTGAGATCACTATTTACCTTCATCATTTTCTTCTTAACTACAGGATGGAGAGAATTAACCCAGATTGTCCAATTACCTACCTGCCAATTGCAAGGCCTACAGATAATTGTCTTGCAAGAATTATAAAAGTAGCATAA
Protein sequence

>Msa0797210

MRCCARQVFHLQTLDRQKLILTSMVSYTIPKGWKVLVWNRGVHMDPENYPSPKEFDPSRWENFKARVGQFLPFGYGSRYCPGSDLAKLEITIYLHHFLLNYRMERINPDCPITYLPIARPTDNCLARIIKVA*