Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036210 | XP_027338966.1 | 62.348 | 247 | 93 | 0 | 2 | 248 | 24 | 270 | 3.89e-109 | 329 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036210 | sp|I1M2U5|NAMT1_SOYBN | 55.061 | 247 | 110 | 1 | 2 | 248 | 11 | 256 | 3.04e-97 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036210 | G7JBI7 | 60.729 | 247 | 97 | 0 | 2 | 248 | 13 | 259 | 4.13e-109 | 325 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0142240 | Msa1036210 | 0.801755 | 7.753238e-49 | -8.615850e-47 |
| Msa1036210 | Msa1076470 | 0.816391 | 5.665844e-52 | -8.615850e-47 |
| Msa1036210 | Msa1076480 | 0.820659 | 6.101366e-53 | -8.615850e-47 |
| Msa1036210 | Msa1083410 | 0.809217 | 2.110574e-50 | -8.615850e-47 |
| Msa1036210 | Msa1098560 | 0.812177 | 4.832948e-51 | -8.615850e-47 |
| Msa1036210 | Msa1122660 | 0.839962 | 1.157478e-57 | -8.615850e-47 |
| Msa1036210 | Msa1228210 | 0.821794 | 3.340881e-53 | -8.615850e-47 |
| Msa1036210 | Msa1267200 | 0.824400 | 8.237961e-54 | -8.615850e-47 |
| Msa1036210 | Msa1271280 | 0.814069 | 1.859130e-51 | -8.615850e-47 |
| Msa1036210 | Msa1271300 | 0.826987 | 2.006109e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036210 | MtrunA17_Chr3g0130061 | 60.729 | 247 | 97 | 0 | 2 | 248 | 13 | 259 | 4.97e-112 | 326 |
| Msa1036210 | MtrunA17_Chr3g0130011 | 60.729 | 247 | 97 | 0 | 2 | 248 | 13 | 259 | 1.96e-111 | 325 |
| Msa1036210 | MtrunA17_Chr2g0314271 | 54.065 | 246 | 112 | 1 | 3 | 248 | 11 | 255 | 2.65e-99 | 293 |
| Msa1036210 | MtrunA17_Chr7g0218181 | 36.122 | 263 | 137 | 7 | 6 | 252 | 26 | 273 | 2.69e-43 | 150 |
| Msa1036210 | MtrunA17_Chr7g0218131 | 35.317 | 252 | 157 | 3 | 6 | 252 | 26 | 276 | 1.69e-41 | 145 |
| Msa1036210 | MtrunA17_Chr3g0128011 | 35.686 | 255 | 156 | 5 | 3 | 252 | 72 | 323 | 1.01e-39 | 142 |
| Msa1036210 | MtrunA17_Chr7g0218211 | 34.524 | 252 | 159 | 3 | 6 | 252 | 25 | 275 | 1.25e-39 | 140 |
| Msa1036210 | MtrunA17_Chr7g0276411 | 32.400 | 250 | 161 | 3 | 9 | 252 | 21 | 268 | 1.44e-39 | 140 |
| Msa1036210 | MtrunA17_Chr8g0367441 | 33.200 | 250 | 159 | 3 | 9 | 252 | 36 | 283 | 2.47e-39 | 140 |
| Msa1036210 | MtrunA17_Chr8g0367451 | 32.000 | 250 | 162 | 3 | 9 | 252 | 35 | 282 | 1.34e-38 | 138 |
| Msa1036210 | MtrunA17_Chr2g0307521 | 33.459 | 266 | 150 | 6 | 2 | 252 | 16 | 269 | 2.09e-38 | 137 |
| Msa1036210 | MtrunA17_Chr7g0218261 | 33.730 | 252 | 160 | 4 | 6 | 252 | 25 | 274 | 8.46e-38 | 135 |
| Msa1036210 | MtrunA17_Chr1g0163611 | 36.293 | 259 | 151 | 10 | 4 | 252 | 21 | 275 | 1.30e-37 | 135 |
| Msa1036210 | MtrunA17_Chr1g0200491 | 35.409 | 257 | 156 | 5 | 4 | 252 | 24 | 278 | 5.36e-37 | 134 |
| Msa1036210 | MtrunA17_Chr7g0218271 | 34.274 | 248 | 152 | 5 | 15 | 252 | 35 | 281 | 8.99e-37 | 133 |
| Msa1036210 | MtrunA17_Chr8g0367491 | 30.830 | 253 | 167 | 3 | 6 | 252 | 32 | 282 | 1.24e-36 | 133 |
| Msa1036210 | MtrunA17_Chr1g0163621 | 39.320 | 206 | 117 | 5 | 53 | 252 | 86 | 289 | 8.17e-36 | 131 |
| Msa1036210 | MtrunA17_Chr7g0218301 | 33.333 | 270 | 143 | 8 | 6 | 252 | 26 | 281 | 4.60e-35 | 129 |
| Msa1036210 | MtrunA17_Chr1g0163601 | 34.884 | 258 | 156 | 8 | 4 | 252 | 21 | 275 | 1.17e-34 | 127 |
| Msa1036210 | MtrunA17_Chr7g0276401 | 31.707 | 246 | 163 | 3 | 10 | 252 | 38 | 281 | 7.49e-34 | 125 |
| Msa1036210 | MtrunA17_Chr8g0367501 | 30.120 | 249 | 166 | 3 | 10 | 252 | 23 | 269 | 1.08e-33 | 126 |
| Msa1036210 | MtrunA17_Chr5g0448091 | 32.540 | 252 | 157 | 6 | 9 | 252 | 23 | 269 | 2.02e-33 | 124 |
| Msa1036210 | MtrunA17_Chr3g0085211 | 35.897 | 195 | 120 | 3 | 62 | 252 | 84 | 277 | 3.25e-30 | 115 |
| Msa1036210 | MtrunA17_Chr8g0367381 | 30.400 | 250 | 147 | 4 | 9 | 252 | 36 | 264 | 3.69e-30 | 115 |
| Msa1036210 | MtrunA17_Chr3g0085201 | 35.385 | 195 | 121 | 3 | 62 | 252 | 71 | 264 | 1.72e-29 | 113 |
| Msa1036210 | MtrunA17_Chr8g0345851 | 36.310 | 168 | 105 | 2 | 85 | 252 | 31 | 196 | 2.91e-29 | 111 |
| Msa1036210 | MtrunA17_Chr4g0022021 | 31.780 | 236 | 154 | 5 | 20 | 252 | 43 | 274 | 2.28e-27 | 108 |
| Msa1036210 | MtrunA17_Chr8g0367401 | 48.387 | 93 | 47 | 1 | 156 | 248 | 19 | 110 | 3.10e-24 | 94.7 |
| Msa1036210 | MtrunA17_Chr4g0021981 | 28.390 | 236 | 162 | 5 | 20 | 252 | 43 | 274 | 2.18e-22 | 94.7 |
| Msa1036210 | MtrunA17_Chr6g0482291 | 45.349 | 86 | 46 | 1 | 166 | 251 | 5 | 89 | 6.88e-21 | 86.7 |
| Msa1036210 | MtrunA17_Chr5g0432251 | 27.966 | 236 | 162 | 6 | 20 | 252 | 32 | 262 | 8.02e-20 | 87.4 |
| Msa1036210 | MtrunA17_Chr1g0170941 | 51.316 | 76 | 36 | 1 | 171 | 246 | 2 | 76 | 8.70e-18 | 75.5 |
| Msa1036210 | MtrunA17_Chr4g0040621 | 28.631 | 241 | 152 | 8 | 20 | 252 | 45 | 273 | 2.03e-17 | 80.5 |
| Msa1036210 | MtrunA17_Chr7g0223241 | 27.386 | 241 | 154 | 7 | 18 | 252 | 29 | 254 | 9.35e-17 | 78.6 |
| Msa1036210 | MtrunA17_Chr7g0219161 | 26.160 | 237 | 165 | 6 | 20 | 252 | 32 | 262 | 1.00e-16 | 78.6 |
| Msa1036210 | MtrunA17_Chr7g0219141 | 26.695 | 236 | 165 | 5 | 20 | 252 | 32 | 262 | 3.21e-16 | 77.0 |
| Msa1036210 | MtrunA17_Chr1g0188391 | 25.207 | 242 | 165 | 7 | 20 | 252 | 32 | 266 | 3.88e-16 | 77.0 |
| Msa1036210 | MtrunA17_Chr1g0188371 | 24.268 | 239 | 173 | 6 | 18 | 252 | 30 | 264 | 7.20e-16 | 76.3 |
| Msa1036210 | MtrunA17_Chr3g0121301 | 36.029 | 136 | 79 | 4 | 121 | 252 | 134 | 265 | 2.36e-15 | 74.7 |
| Msa1036210 | MtrunA17_Chr5g0432301 | 25.847 | 236 | 167 | 6 | 20 | 252 | 33 | 263 | 4.36e-15 | 73.9 |
| Msa1036210 | MtrunA17_Chr8g0367421 | 38.710 | 93 | 39 | 1 | 156 | 248 | 19 | 93 | 4.58e-14 | 67.0 |
| Msa1036210 | MtrunA17_Chr8g0367471 | 45.763 | 59 | 31 | 1 | 172 | 230 | 11 | 68 | 1.69e-12 | 62.0 |
| Msa1036210 | MtrunA17_Chr5g0432261 | 25.641 | 234 | 143 | 6 | 20 | 252 | 28 | 231 | 1.96e-12 | 65.9 |
| Msa1036210 | MtrunA17_Chr4g0046531 | 23.868 | 243 | 165 | 7 | 18 | 252 | 30 | 260 | 4.36e-12 | 65.9 |
| Msa1036210 | MtrunA17_Chr4g0046361 | 27.083 | 240 | 162 | 8 | 20 | 252 | 32 | 265 | 6.90e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036210 | AT3G53140.1 | 50.996 | 251 | 119 | 1 | 2 | 248 | 10 | 260 | 1.46e-88 | 267 |
| Msa1036210 | AT5G54160.1 | 38.039 | 255 | 148 | 7 | 3 | 252 | 18 | 267 | 3.04e-44 | 153 |
| Msa1036210 | AT1G51990.1 | 36.923 | 195 | 118 | 2 | 62 | 252 | 74 | 267 | 7.99e-38 | 136 |
| Msa1036210 | AT1G51990.2 | 36.410 | 195 | 119 | 2 | 62 | 252 | 74 | 267 | 1.66e-36 | 132 |
| Msa1036210 | AT1G77520.1 | 31.102 | 254 | 162 | 5 | 10 | 252 | 35 | 286 | 3.99e-31 | 119 |
| Msa1036210 | AT1G33030.1 | 30.800 | 250 | 163 | 5 | 9 | 252 | 11 | 256 | 6.67e-25 | 101 |
| Msa1036210 | AT1G33030.2 | 30.894 | 246 | 160 | 5 | 9 | 248 | 11 | 252 | 9.85e-25 | 99.4 |
| Msa1036210 | AT1G33030.3 | 30.894 | 246 | 160 | 5 | 9 | 248 | 11 | 252 | 1.14e-24 | 99.8 |
| Msa1036210 | AT5G53810.1 | 33.065 | 248 | 150 | 9 | 18 | 252 | 39 | 283 | 5.36e-24 | 99.4 |
| Msa1036210 | AT1G21120.1 | 33.725 | 255 | 158 | 6 | 6 | 252 | 27 | 278 | 1.35e-23 | 98.2 |
| Msa1036210 | AT1G21120.2 | 33.725 | 255 | 158 | 6 | 6 | 252 | 75 | 326 | 4.06e-23 | 97.4 |
| Msa1036210 | AT1G21130.1 | 33.725 | 255 | 158 | 6 | 6 | 252 | 27 | 278 | 4.73e-23 | 97.1 |
| Msa1036210 | AT1G21100.1 | 33.333 | 255 | 159 | 6 | 6 | 252 | 27 | 278 | 8.89e-23 | 96.3 |
| Msa1036210 | AT1G21130.2 | 33.865 | 251 | 155 | 6 | 6 | 248 | 27 | 274 | 1.18e-22 | 94.7 |
| Msa1036210 | AT1G21110.1 | 33.333 | 255 | 159 | 6 | 6 | 252 | 27 | 278 | 1.67e-22 | 95.5 |
| Msa1036210 | AT1G76790.1 | 32.046 | 259 | 159 | 7 | 6 | 252 | 17 | 270 | 8.18e-22 | 93.2 |
| Msa1036210 | AT1G63140.2 | 31.076 | 251 | 160 | 6 | 13 | 252 | 38 | 286 | 3.11e-21 | 92.0 |
| Msa1036210 | AT1G63140.1 | 31.174 | 247 | 157 | 6 | 13 | 248 | 58 | 302 | 3.48e-21 | 90.9 |
| Msa1036210 | AT1G63140.4 | 31.076 | 251 | 160 | 6 | 13 | 252 | 58 | 306 | 3.66e-21 | 92.0 |
| Msa1036210 | AT1G77530.1 | 33.725 | 255 | 144 | 10 | 15 | 252 | 40 | 286 | 3.95e-21 | 91.7 |
| Msa1036210 | AT5G37170.1 | 30.366 | 191 | 102 | 6 | 62 | 248 | 72 | 235 | 1.83e-18 | 83.6 |
| Msa1036210 | AT5G37170.2 | 36.154 | 130 | 78 | 4 | 123 | 248 | 7 | 135 | 3.28e-18 | 81.3 |
| Msa1036210 | AT4G35160.1 | 29.502 | 261 | 166 | 6 | 2 | 252 | 27 | 279 | 1.21e-16 | 79.0 |
| Msa1036210 | AT5G37170.3 | 47.436 | 78 | 39 | 2 | 172 | 248 | 11 | 87 | 9.82e-16 | 73.6 |
| Msa1036210 | AT1G62900.1 | 42.268 | 97 | 55 | 1 | 156 | 252 | 15 | 110 | 1.24e-14 | 70.9 |
| Msa1036210 | AT1G63140.3 | 29.864 | 221 | 142 | 6 | 13 | 222 | 58 | 276 | 1.68e-13 | 69.3 |
| Msa1036210 | AT1G77530.2 | 32.174 | 230 | 131 | 10 | 15 | 227 | 40 | 261 | 3.19e-13 | 68.2 |
| Msa1036210 | AT4G35150.1 | 26.587 | 252 | 142 | 7 | 2 | 252 | 13 | 222 | 1.79e-12 | 66.6 |
Find 133 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGCTTCCTTTGTTGAAAA+TGG | 0.201432 | 7_1:+72456445 | None:intergenic |
| GATGCACTTGCAACAATTTC+GGG | 0.208479 | 7_1:+72455772 | None:intergenic |
| AATAGTTAATAAGGATAATT+TGG | 0.212935 | 7_1:-72454321 | Msa1036210:three_prime_UTR |
| TGTGGCTACTGCTATTAATT+TGG | 0.223017 | 7_1:-72454073 | Msa1036210:three_prime_UTR |
| TGTTCCATATAATCTTATTT+TGG | 0.230280 | 7_1:-72454577 | Msa1036210:three_prime_UTR |
| AAAACCAAAATAAGATTATA+TGG | 0.250414 | 7_1:+72454573 | None:intergenic |
| TTAAACAACTTCATTTGTTC+TGG | 0.260799 | 7_1:+72455964 | None:intergenic |
| AAACTAACCAATAGTTAATA+AGG | 0.261463 | 7_1:-72454330 | Msa1036210:three_prime_UTR |
| GGATGCACTTGCAACAATTT+CGG | 0.264494 | 7_1:+72455771 | None:intergenic |
| TACTGCTATTAATTTGGTTT+CGG | 0.285189 | 7_1:-72454067 | Msa1036210:three_prime_UTR |
| TTGATTCCCTTGCTAATGTT+TGG | 0.298354 | 7_1:+72455805 | None:intergenic |
| CCACTTGCAGTGGTTGTGTT+TGG | 0.298953 | 7_1:-72454954 | Msa1036210:three_prime_UTR |
| CACTTGCAGTGGTTGTGTTT+GGG | 0.301970 | 7_1:-72454953 | Msa1036210:three_prime_UTR |
| AAATTATCCTTATTAACTAT+TGG | 0.314472 | 7_1:+72454323 | None:intergenic |
| TCTGCTTCCCCTCCTCCGTT+TGG | 0.331094 | 7_1:+72456383 | None:intergenic |
| CTGGTTCCCCATTCACCTTC+CGG | 0.342630 | 7_1:+72456010 | None:intergenic |
| CTGCTTCCCCTCCTCCGTTT+GGG | 0.348793 | 7_1:+72456384 | None:intergenic |
| TATGTCGGCTTCCGAGATTT+TGG | 0.350091 | 7_1:-72456417 | Msa1036210:CDS |
| AAGAAGGGACACTCATTAGA+TGG | 0.354636 | 7_1:+72456504 | None:intergenic |
| CCTTTGTTGAAAATGGTATT+CGG | 0.362610 | 7_1:+72456452 | None:intergenic |
| CGGAACATCTAGTTCAATTA+CGG | 0.368181 | 7_1:+72456472 | None:intergenic |
| GTAGTGTGCAGAATATTAAT+TGG | 0.370203 | 7_1:+72454372 | None:intergenic |
| TGATTCCCTTGCTAATGTTT+GGG | 0.371395 | 7_1:+72455806 | None:intergenic |
| TTCTACATGCACGTCTCAAA+TGG | 0.375171 | 7_1:-72454145 | Msa1036210:three_prime_UTR |
| AAACAGCTGGGTGTGGCTGC+TGG | 0.376698 | 7_1:-72454728 | Msa1036210:three_prime_UTR |
| GAATTGCCATCGCACTCTTC+CGG | 0.392975 | 7_1:-72454894 | Msa1036210:three_prime_UTR |
| AACCATTCCGGAAGGTGAAT+GGG | 0.395689 | 7_1:-72456017 | Msa1036210:CDS |
| GTAATATTTGCTTGAGTGGT+GGG | 0.410185 | 7_1:-72454210 | Msa1036210:three_prime_UTR |
| ACCCATCCACAGAACCATTC+CGG | 0.411495 | 7_1:-72456029 | Msa1036210:CDS |
| ACAACCTGAGCATACGTTCC+AGG | 0.411672 | 7_1:+72456357 | None:intergenic |
| AACTAGTATACCTGGGAGTT+GGG | 0.411741 | 7_1:+72455750 | None:intergenic |
| TTCCGGAATGGTTCTGTGGA+TGG | 0.419718 | 7_1:+72456027 | None:intergenic |
| TTGCATAGCATGCGTATATG+AGG | 0.420769 | 7_1:-72456083 | Msa1036210:intron |
| GTGCTTTCGTCCGTCACCTC+TGG | 0.424029 | 7_1:+72454836 | None:intergenic |
| AAACTAGTATACCTGGGAGT+TGG | 0.430030 | 7_1:+72455749 | None:intergenic |
| TGGAGACGCTATCCTGATAA+AGG | 0.432027 | 7_1:-72455064 | Msa1036210:CDS |
| TCGTAGTGTGGAAACTTTAG+TGG | 0.433853 | 7_1:-72455878 | Msa1036210:CDS |
| GGTCCTCAACCACGTCCTTA+AGG | 0.435556 | 7_1:+72456049 | None:intergenic |
| AAGAATAACGAAAACTTGTA+TGG | 0.436015 | 7_1:+72456590 | None:intergenic |
| ACGTATGCTCAGGTTGTTAA+CGG | 0.445131 | 7_1:-72456351 | Msa1036210:CDS |
| GAACCATTCCGGAAGGTGAA+TGG | 0.449823 | 7_1:-72456018 | Msa1036210:CDS |
| AGTCTTTCAGATTGAATAAG+TGG | 0.452614 | 7_1:-72454636 | Msa1036210:three_prime_UTR |
| TGAAAAGGAGTTCAAACAGC+TGG | 0.457935 | 7_1:-72454741 | Msa1036210:three_prime_UTR |
| TTGGCAATTGTTCGCCCAAA+CGG | 0.469424 | 7_1:-72456398 | Msa1036210:CDS |
| TATTGCATTGGAAACTGAAA+GGG | 0.474373 | 7_1:+72454422 | None:intergenic |
| TCTCCTTAAGGACGTGGTTG+AGG | 0.475785 | 7_1:-72456052 | Msa1036210:CDS |
| TGGTGGTGTTGAAGCATGTA+AGG | 0.478628 | 7_1:+72456221 | None:intergenic |
| AGCAAAACATAGAACTGAAA+AGG | 0.478672 | 7_1:-72454756 | Msa1036210:three_prime_UTR |
| GTGGATGTCGGAGGCAGTAC+AGG | 0.478932 | 7_1:-72455859 | Msa1036210:CDS |
| AACGGCTTACGATATCTTTG+AGG | 0.480985 | 7_1:-72456333 | Msa1036210:CDS |
| TTTACGTAAAAGTCATGTGC+TGG | 0.488023 | 7_1:+72455991 | None:intergenic |
| TCTACATGCACGTCTCAAAT+GGG | 0.490742 | 7_1:-72454144 | Msa1036210:three_prime_UTR |
| CATCGCACTCTTCCGGCGCA+TGG | 0.492823 | 7_1:-72454887 | Msa1036210:three_prime_UTR |
| TCCGGAATGGTTCTGTGGAT+GGG | 0.493951 | 7_1:+72456028 | None:intergenic |
| TCCCCATTCACCTTCCGGAA+TGG | 0.494698 | 7_1:+72456015 | None:intergenic |
| TCCGTCACCTCTGGCAGCAC+AGG | 0.497598 | 7_1:+72454845 | None:intergenic |
| GAGGAGCACTTGATGAGTAA+TGG | 0.500457 | 7_1:-72456314 | Msa1036210:CDS |
| ATTACGGCAACTAGAGAAGA+AGG | 0.503424 | 7_1:+72456488 | None:intergenic |
| AATGATTAAAAGAAAGAGAA+TGG | 0.513366 | 7_1:+72454290 | None:intergenic |
| ACCAGGTCAAAGGCTTTACT+AGG | 0.515856 | 7_1:-72454815 | Msa1036210:three_prime_UTR |
| ACTTATTCAATCTGAAAGAC+TGG | 0.518427 | 7_1:+72454638 | None:intergenic |
| AGCATGCGTATATGAGGGCC+TGG | 0.519335 | 7_1:-72456077 | Msa1036210:CDS |
| AGTAATATTTGCTTGAGTGG+TGG | 0.523637 | 7_1:-72454211 | Msa1036210:three_prime_UTR |
| ATTGTTCGCCCAAACGGAGG+AGG | 0.524896 | 7_1:-72456392 | Msa1036210:CDS |
| GTCTTCATGATGACCATGTA+CGG | 0.525468 | 7_1:-72454785 | Msa1036210:three_prime_UTR |
| AAAGTTCTCACTTGCAGAGG+TGG | 0.525549 | 7_1:-72456285 | Msa1036210:CDS |
| CCAAACACAACCACTGCAAG+TGG | 0.528930 | 7_1:+72454954 | None:intergenic |
| TCCTGTGCTGCCAGAGGTGA+CGG | 0.530070 | 7_1:-72454846 | Msa1036210:three_prime_UTR |
| GGACGAAAGCACCAGGTCAA+AGG | 0.536548 | 7_1:-72454825 | Msa1036210:three_prime_UTR |
| TAATATTTGCTTGAGTGGTG+GGG | 0.536655 | 7_1:-72454209 | Msa1036210:three_prime_UTR |
| GACGAAACATAAATTAAAGA+TGG | 0.537470 | 7_1:+72454110 | None:intergenic |
| AATTAATATTCCACTTGCAG+TGG | 0.538003 | 7_1:-72454964 | Msa1036210:three_prime_UTR |
| CTGGCCTCTCCTTAAGGACG+TGG | 0.540481 | 7_1:-72456058 | Msa1036210:CDS |
| TCTCGGAAGCCGACATAGGA+AGG | 0.542283 | 7_1:+72456423 | None:intergenic |
| ATTATAAGTTTGCCATGCGC+CGG | 0.546826 | 7_1:+72454875 | None:intergenic |
| GCGAACAATTGCCAAAATCT+CGG | 0.548219 | 7_1:+72456406 | None:intergenic |
| TTATTGCATTGGAAACTGAA+AGG | 0.548694 | 7_1:+72454421 | None:intergenic |
| GGGAGTAATATTTGCTTGAG+TGG | 0.548803 | 7_1:-72454214 | Msa1036210:three_prime_UTR |
| AAAATCTCGGAAGCCGACAT+AGG | 0.549653 | 7_1:+72456419 | None:intergenic |
| CAGCAGTGGTTGAAAACATT+CGG | 0.549722 | 7_1:-72456700 | Msa1036210:five_prime_UTR |
| CAGTGGCATCACCACCAACA+TGG | 0.551519 | 7_1:+72455100 | None:intergenic |
| AAACTTGTATGGATGTAAGA+AGG | 0.552599 | 7_1:+72456601 | None:intergenic |
| ATACGATGGGTTTCGTAGTG+TGG | 0.561476 | 7_1:-72455890 | Msa1036210:CDS |
| TTGTTCGCCCAAACGGAGGA+GGG | 0.561614 | 7_1:-72456391 | Msa1036210:CDS |
| CACGTCCTTAAGGAGAGGCC+AGG | 0.564870 | 7_1:+72456059 | None:intergenic |
| AGAAGGGACACTCATTAGAT+GGG | 0.568213 | 7_1:+72456505 | None:intergenic |
| GTGTGCAGAATATTAATTGG+AGG | 0.573439 | 7_1:+72454375 | None:intergenic |
| ATTGAATAAGTGGAGCATGT+TGG | 0.574143 | 7_1:-72454626 | Msa1036210:three_prime_UTR |
| GCCACTGAGTTTGTTCCTCG+TGG | 0.574487 | 7_1:-72455084 | Msa1036210:CDS |
| TAAATTCCCAAACATTAGCA+AGG | 0.576073 | 7_1:-72455812 | Msa1036210:CDS |
| CATTTCTTTGCAGATTACAA+TGG | 0.576234 | 7_1:-72455836 | Msa1036210:CDS |
| GGAGTTCAAACAGCTGGGTG+TGG | 0.577947 | 7_1:-72454735 | Msa1036210:three_prime_UTR |
| AGGAGGGGAAGCAGATAACC+TGG | 0.579867 | 7_1:-72456375 | Msa1036210:CDS |
| TATATAGGCATAACCCATGT+TGG | 0.581114 | 7_1:-72455114 | Msa1036210:intron |
| TGTTCGCCCAAACGGAGGAG+GGG | 0.581679 | 7_1:-72456390 | Msa1036210:CDS |
| AGGTGACGGACGAAAGCACC+AGG | 0.581942 | 7_1:-72454832 | Msa1036210:three_prime_UTR |
| AGGAAGCAACCTTCCTATGT+CGG | 0.584154 | 7_1:-72456432 | Msa1036210:CDS |
| CACCTTCCGGAATGGTTCTG+TGG | 0.586048 | 7_1:+72456023 | None:intergenic |
| GAAAAGGAGTTCAAACAGCT+GGG | 0.589404 | 7_1:-72454740 | Msa1036210:three_prime_UTR |
| ATAACCTGGAACGTATGCTC+AGG | 0.589626 | 7_1:-72456361 | Msa1036210:CDS |
| GCAAGTGCATCCCAACTCCC+AGG | 0.592348 | 7_1:-72455760 | Msa1036210:intron |
| ACCTAGTAAAGCCTTTGACC+TGG | 0.594855 | 7_1:+72454814 | None:intergenic |
| GTGGAAACTTTAGTGGATGT+CGG | 0.595728 | 7_1:-72455871 | Msa1036210:CDS |
| TAGAAAGTTCTCACTTGCAG+AGG | 0.598594 | 7_1:-72456288 | Msa1036210:CDS |
| TCTTCATGATGACCATGTAC+GGG | 0.603036 | 7_1:-72454784 | Msa1036210:three_prime_UTR |
| ATAGGCATAACCCATGTTGG+TGG | 0.606921 | 7_1:-72455111 | Msa1036210:intron |
| TTACATGCTTCAACACCACC+AGG | 0.609500 | 7_1:-72456219 | Msa1036210:intron |
| ATTTGAAAATGAGCAAAGCA+AGG | 0.609873 | 7_1:-72456547 | Msa1036210:exon |
| TGCATAGCATGCGTATATGA+GGG | 0.613972 | 7_1:-72456082 | Msa1036210:intron |
| AAGTTCTCACTTGCAGAGGT+GGG | 0.615623 | 7_1:-72456284 | Msa1036210:CDS |
| AGGTCAAAGGCTTTACTAGG+TGG | 0.619777 | 7_1:-72454812 | Msa1036210:three_prime_UTR |
| GGTCAAAGGCTTTACTAGGT+GGG | 0.619833 | 7_1:-72454811 | Msa1036210:three_prime_UTR |
| ACCATTCCGGAAGGTGAATG+GGG | 0.621557 | 7_1:-72456016 | Msa1036210:CDS |
| TCTCTTGCTGAAGATGAAGA+CGG | 0.627359 | 7_1:-72456257 | Msa1036210:CDS |
| GCAATTGTTCGCCCAAACGG+AGG | 0.629443 | 7_1:-72456395 | Msa1036210:CDS |
| TGTGCAGAATATTAATTGGA+GGG | 0.630051 | 7_1:+72454376 | None:intergenic |
| CATGCGCCGGAAGAGTGCGA+TGG | 0.635476 | 7_1:+72454888 | None:intergenic |
| AAATTCCCAAACATTAGCAA+GGG | 0.640329 | 7_1:-72455811 | Msa1036210:CDS |
| AATGTAGTGCAAGTATGATG+AGG | 0.641930 | 7_1:-72454916 | Msa1036210:three_prime_UTR |
| AGTGGCATCACCACCAACAT+GGG | 0.643457 | 7_1:+72455101 | None:intergenic |
| AATAATGTGATGTGCAGCAG+TGG | 0.659838 | 7_1:-72456714 | Msa1036210:five_prime_UTR |
| TCAACCACGTCCTTAAGGAG+AGG | 0.660229 | 7_1:+72456054 | None:intergenic |
| GGTGGTGTTGAAGCATGTAA+GGG | 0.663090 | 7_1:+72456222 | None:intergenic |
| ATCCACAGAACCATTCCGGA+AGG | 0.665153 | 7_1:-72456025 | Msa1036210:CDS |
| AGTAGCCACAACAGTATATG+CGG | 0.678416 | 7_1:+72454086 | None:intergenic |
| GATTGTTGTAGCGAGTACGT+TGG | 0.683334 | 7_1:-72454604 | Msa1036210:three_prime_UTR |
| ATGCACTTGCAACAATTTCG+GGG | 0.690506 | 7_1:+72455773 | None:intergenic |
| TTGTGATCCTGTGCTGCCAG+AGG | 0.692848 | 7_1:-72454852 | Msa1036210:three_prime_UTR |
| TTACGGCAACTAGAGAAGAA+GGG | 0.699895 | 7_1:+72456489 | None:intergenic |
| GTGGTGTTGAAGCATGTAAG+GGG | 0.700082 | 7_1:+72456223 | None:intergenic |
| GAAACTTTAGTGGATGTCGG+AGG | 0.715337 | 7_1:-72455868 | Msa1036210:CDS |
| ATCAGGATAGCGTCTCCACG+AGG | 0.727846 | 7_1:+72455069 | None:intergenic |
| TCCACGAGGAACAAACTCAG+TGG | 0.743713 | 7_1:+72455083 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAATTTGTTTTTACAAA+AGG | - | chr7_1:72455154-72455173 | Msa1036210:intron | 10.0% |
| !!! | GGTTATTATTATTATTTTTT+CGG | - | chr7_1:72455192-72455211 | Msa1036210:intron | 10.0% |
| !! | GAATAATTTAAAAAAAATTG+AGG | + | chr7_1:72456555-72456574 | None:intergenic | 10.0% |
| !!! | TTTCAATTTAAATCGATTTT+AGG | + | chr7_1:72454097-72454116 | None:intergenic | 15.0% |
| !!! | AAGTGTTGTTAATTTTTTTA+GGG | - | chr7_1:72455241-72455260 | Msa1036210:intron | 15.0% |
| !! | AAAATATTTGCAAGTATATA+TGG | + | chr7_1:72455560-72455579 | None:intergenic | 15.0% |
| !! | AAAACCAAAATAAGATTATA+TGG | + | chr7_1:72456157-72456176 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr7_1:72456383-72456402 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr7_1:72456407-72456426 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr7_1:72456406-72456425 | Msa1036210:CDS | 15.0% |
| !!! | TTGTTTAACAAAGCTTTTAT+TGG | - | chr7_1:72454778-72454797 | Msa1036210:three_prime_UTR | 20.0% |
| !!! | CGATGTATATATTTTTAGAT+TGG | - | chr7_1:72455008-72455027 | Msa1036210:three_prime_UTR | 20.0% |
| !!! | AAATTTGTTTTTACAAAAGG+TGG | - | chr7_1:72455157-72455176 | Msa1036210:intron | 20.0% |
| !!! | GAAGTGTTGTTAATTTTTTT+AGG | - | chr7_1:72455240-72455259 | Msa1036210:intron | 20.0% |
| !! | TACACTTATACTTAAAAGTA+GGG | + | chr7_1:72455492-72455511 | None:intergenic | 20.0% |
| !! | ATACACTTATACTTAAAAGT+AGG | + | chr7_1:72455493-72455512 | None:intergenic | 20.0% |
| !! | CATAATCATATTGCATATAT+AGG | - | chr7_1:72455598-72455617 | Msa1036210:intron | 20.0% |
| !!! | TTTTAATTCAATTAGAGAGT+GGG | + | chr7_1:72455700-72455719 | None:intergenic | 20.0% |
| !!! | TTTTTAATTCAATTAGAGAG+TGG | + | chr7_1:72455701-72455720 | None:intergenic | 20.0% |
| !!! | TGTTCCATATAATCTTATTT+TGG | - | chr7_1:72456150-72456169 | Msa1036210:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr7_1:72456320-72456339 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr7_1:72456397-72456416 | Msa1036210:CDS | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | + | chr7_1:72456440-72456459 | None:intergenic | 20.0% |
| !! | TTTAAAAAAAATTGAGGTGT+GGG | + | chr7_1:72456549-72456568 | None:intergenic | 20.0% |
| !! | ATTTAAAAAAAATTGAGGTG+TGG | + | chr7_1:72456550-72456569 | None:intergenic | 20.0% |
| ! | AAGAATAACGAAAACTTGTA+TGG | + | chr7_1:72454140-72454159 | None:intergenic | 25.0% |
| ! | TTAAACAACTTCATTTGTTC+TGG | + | chr7_1:72454766-72454785 | None:intergenic | 25.0% |
| !! | AACTTCTCTAAAAAATGGAA+TGG | + | chr7_1:72454809-72454828 | None:intergenic | 25.0% |
| !!! | TCCATTTTTTAGAGAAGTTT+TGG | - | chr7_1:72454810-72454829 | Msa1036210:three_prime_UTR | 25.0% |
| !! | TCCAAAACTTCTCTAAAAAA+TGG | + | chr7_1:72454814-72454833 | None:intergenic | 25.0% |
| !!! | ACTTTAAAACTAGTATACCT+GGG | + | chr7_1:72454987-72455006 | None:intergenic | 25.0% |
| !!! | TACTTTAAAACTAGTATACC+TGG | + | chr7_1:72454988-72455007 | None:intergenic | 25.0% |
| !! | TAATAATAAAGCCCTCATTT+TGG | + | chr7_1:72455123-72455142 | None:intergenic | 25.0% |
| !!! | ACAACCGCTTTTTTTTTTTA+GGG | - | chr7_1:72455423-72455442 | Msa1036210:intron | 25.0% |
| ! | GACGAAACATAAATTAAAGA+TGG | + | chr7_1:72456620-72456639 | None:intergenic | 25.0% |
| !! | TACTGCTATTAATTTGGTTT+CGG | - | chr7_1:72456660-72456679 | Msa1036210:five_prime_UTR | 25.0% |
| AAACTTGTATGGATGTAAGA+AGG | + | chr7_1:72454129-72454148 | None:intergenic | 30.0% | |
| ATTTGAAAATGAGCAAAGCA+AGG | - | chr7_1:72454180-72454199 | Msa1036210:three_prime_UTR | 30.0% | |
| CCTTTGTTGAAAATGGTATT+CGG | + | chr7_1:72454278-72454297 | None:intergenic | 30.0% | |
| ACAACTGATAATTACTAACC+TGG | + | chr7_1:72454529-72454548 | None:intergenic | 30.0% | |
| !!! | AAGTTTTGGAATCATACGAT+GGG | - | chr7_1:72454824-72454843 | Msa1036210:three_prime_UTR | 30.0% |
| CATTTCTTTGCAGATTACAA+TGG | - | chr7_1:72454891-72454910 | Msa1036210:three_prime_UTR | 30.0% | |
| TAAATTCCCAAACATTAGCA+AGG | - | chr7_1:72454915-72454934 | Msa1036210:three_prime_UTR | 30.0% | |
| AAATTCCCAAACATTAGCAA+GGG | - | chr7_1:72454916-72454935 | Msa1036210:three_prime_UTR | 30.0% | |
| !!! | CACAACCGCTTTTTTTTTTT+AGG | - | chr7_1:72455422-72455441 | Msa1036210:intron | 30.0% |
| !!! | CAACCGCTTTTTTTTTTTAG+GGG | - | chr7_1:72455424-72455443 | Msa1036210:intron | 30.0% |
| AGACCCCTAAAAAAAAAAAG+CGG | + | chr7_1:72455430-72455449 | None:intergenic | 30.0% | |
| ! | TTATTAGGTTGCCTTATGTT+TGG | - | chr7_1:72455461-72455480 | Msa1036210:intron | 30.0% |
| ! | TATTAGGTTGCCTTATGTTT+GGG | - | chr7_1:72455462-72455481 | Msa1036210:intron | 30.0% |
| CTTATACTTAAAAGTAGGGT+CGG | + | chr7_1:72455488-72455507 | None:intergenic | 30.0% | |
| ! | GATGAATTTTGTCCTTTATC+AGG | + | chr7_1:72455678-72455697 | None:intergenic | 30.0% |
| AATTAATATTCCACTTGCAG+TGG | - | chr7_1:72455763-72455782 | Msa1036210:CDS | 30.0% | |
| AGCAAAACATAGAACTGAAA+AGG | - | chr7_1:72455971-72455990 | Msa1036210:CDS | 30.0% | |
| ! | TGATGCATACATGACATTTT+TGG | - | chr7_1:72456049-72456068 | Msa1036210:CDS | 30.0% |
| ACTTATTCAATCTGAAAGAC+TGG | + | chr7_1:72456092-72456111 | None:intergenic | 30.0% | |
| AGTCTTTCAGATTGAATAAG+TGG | - | chr7_1:72456091-72456110 | Msa1036210:intron | 30.0% | |
| TATTGCATTGGAAACTGAAA+GGG | + | chr7_1:72456308-72456327 | None:intergenic | 30.0% | |
| TTATTGCATTGGAAACTGAA+AGG | + | chr7_1:72456309-72456328 | None:intergenic | 30.0% | |
| TGTGCAGAATATTAATTGGA+GGG | + | chr7_1:72456354-72456373 | None:intergenic | 30.0% | |
| GTAGTGTGCAGAATATTAAT+TGG | + | chr7_1:72456358-72456377 | None:intergenic | 30.0% | |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr7_1:72456489-72456508 | Msa1036210:CDS | 30.0% |
| ! | CGGAACATCTAGTTCAATTA+CGG | + | chr7_1:72454258-72454277 | None:intergenic | 35.0% |
| ! | CCGAATACCATTTTCAACAA+AGG | - | chr7_1:72454275-72454294 | Msa1036210:three_prime_UTR | 35.0% |
| GTTGCTTCCTTTGTTGAAAA+TGG | + | chr7_1:72454285-72454304 | None:intergenic | 35.0% | |
| ACTGATAATTACTAACCTGG+TGG | + | chr7_1:72454526-72454545 | None:intergenic | 35.0% | |
| TTTACGTAAAAGTCATGTGC+TGG | + | chr7_1:72454739-72454758 | None:intergenic | 35.0% | |
| !!! | GAAGTTTTGGAATCATACGA+TGG | - | chr7_1:72454823-72454842 | Msa1036210:three_prime_UTR | 35.0% |
| TGATTCCCTTGCTAATGTTT+GGG | + | chr7_1:72454924-72454943 | None:intergenic | 35.0% | |
| TTGATTCCCTTGCTAATGTT+TGG | + | chr7_1:72454925-72454944 | None:intergenic | 35.0% | |
| TAAGTACTTGGCATTTAAGC+AGG | - | chr7_1:72455062-72455081 | Msa1036210:CDS | 35.0% | |
| AAGTACTTGGCATTTAAGCA+GGG | - | chr7_1:72455063-72455082 | Msa1036210:CDS | 35.0% | |
| !!! | CTCATTTTGGTGTTTGCTTT+GGG | + | chr7_1:72455110-72455129 | None:intergenic | 35.0% |
| CAAAGCAAACACCAAAATGA+GGG | - | chr7_1:72455109-72455128 | Msa1036210:CDS | 35.0% | |
| ! | AAAAGGTGGTAGTGTTGTTA+TGG | - | chr7_1:72455171-72455190 | Msa1036210:intron | 35.0% |
| CATATCGATATCTAGCAGAA+TGG | + | chr7_1:72455389-72455408 | None:intergenic | 35.0% | |
| !!! | TTTTTTAGGGGTCTAAAGCA+AGG | - | chr7_1:72455436-72455455 | Msa1036210:intron | 35.0% |
| !! | TTTTTAGGGGTCTAAAGCAA+GGG | - | chr7_1:72455437-72455456 | Msa1036210:intron | 35.0% |
| ! | GTCTAAAGCAAGGGTTTATT+AGG | - | chr7_1:72455446-72455465 | Msa1036210:intron | 35.0% |
| TATATAGGCATAACCCATGT+TGG | - | chr7_1:72455613-72455632 | Msa1036210:intron | 35.0% | |
| AATGTAGTGCAAGTATGATG+AGG | - | chr7_1:72455811-72455830 | Msa1036210:CDS | 35.0% | |
| !!! | TTTTGGAGTATCACAAGTAG+CGG | - | chr7_1:72456066-72456085 | Msa1036210:CDS | 35.0% |
| ATTGAATAAGTGGAGCATGT+TGG | - | chr7_1:72456101-72456120 | Msa1036210:intron | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr7_1:72456253-72456272 | None:intergenic | 35.0% |
| GTGTGCAGAATATTAATTGG+AGG | + | chr7_1:72456355-72456374 | None:intergenic | 35.0% | |
| AGTAATATTTGCTTGAGTGG+TGG | - | chr7_1:72456516-72456535 | Msa1036210:CDS | 35.0% | |
| GTAATATTTGCTTGAGTGGT+GGG | - | chr7_1:72456517-72456536 | Msa1036210:CDS | 35.0% | |
| TAATATTTGCTTGAGTGGTG+GGG | - | chr7_1:72456518-72456537 | Msa1036210:CDS | 35.0% | |
| TGTGGCTACTGCTATTAATT+TGG | - | chr7_1:72456654-72456673 | Msa1036210:five_prime_UTR | 35.0% | |
| AATAATGTGATGTGCAGCAG+TGG | - | chr7_1:72454013-72454032 | Msa1036210:three_prime_UTR | 40.0% | |
| CAGCAGTGGTTGAAAACATT+CGG | - | chr7_1:72454027-72454046 | Msa1036210:three_prime_UTR | 40.0% | |
| AGAAGGGACACTCATTAGAT+GGG | + | chr7_1:72454225-72454244 | None:intergenic | 40.0% | |
| AAGAAGGGACACTCATTAGA+TGG | + | chr7_1:72454226-72454245 | None:intergenic | 40.0% | |
| TTACGGCAACTAGAGAAGAA+GGG | + | chr7_1:72454241-72454260 | None:intergenic | 40.0% | |
| ATTACGGCAACTAGAGAAGA+AGG | + | chr7_1:72454242-72454261 | None:intergenic | 40.0% | |
| GCGAACAATTGCCAAAATCT+CGG | + | chr7_1:72454324-72454343 | None:intergenic | 40.0% | |
| ! | ACGTATGCTCAGGTTGTTAA+CGG | - | chr7_1:72454376-72454395 | Msa1036210:three_prime_UTR | 40.0% |
| AACGGCTTACGATATCTTTG+AGG | - | chr7_1:72454394-72454413 | Msa1036210:three_prime_UTR | 40.0% | |
| TAGAAAGTTCTCACTTGCAG+AGG | - | chr7_1:72454439-72454458 | Msa1036210:three_prime_UTR | 40.0% | |
| TCTCTTGCTGAAGATGAAGA+CGG | - | chr7_1:72454470-72454489 | Msa1036210:three_prime_UTR | 40.0% | |
| TTGCATAGCATGCGTATATG+AGG | - | chr7_1:72454644-72454663 | Msa1036210:three_prime_UTR | 40.0% | |
| TGCATAGCATGCGTATATGA+GGG | - | chr7_1:72454645-72454664 | Msa1036210:three_prime_UTR | 40.0% | |
| TCGTAGTGTGGAAACTTTAG+TGG | - | chr7_1:72454849-72454868 | Msa1036210:three_prime_UTR | 40.0% | |
| ! | GTGGAAACTTTAGTGGATGT+CGG | - | chr7_1:72454856-72454875 | Msa1036210:three_prime_UTR | 40.0% |
| ATGCACTTGCAACAATTTCG+GGG | + | chr7_1:72454957-72454976 | None:intergenic | 40.0% | |
| GATGCACTTGCAACAATTTC+GGG | + | chr7_1:72454958-72454977 | None:intergenic | 40.0% | |
| GGATGCACTTGCAACAATTT+CGG | + | chr7_1:72454959-72454978 | None:intergenic | 40.0% | |
| AACTAGTATACCTGGGAGTT+GGG | + | chr7_1:72454980-72454999 | None:intergenic | 40.0% | |
| AAACTAGTATACCTGGGAGT+TGG | + | chr7_1:72454981-72455000 | None:intergenic | 40.0% | |
| GTACGTGACTGTTAAGTACT+TGG | - | chr7_1:72455050-72455069 | Msa1036210:CDS | 40.0% | |
| !!! | CCTCATTTTGGTGTTTGCTT+TGG | + | chr7_1:72455111-72455130 | None:intergenic | 40.0% |
| CCAAAGCAAACACCAAAATG+AGG | - | chr7_1:72455108-72455127 | Msa1036210:CDS | 40.0% | |
| AACGAACATGTGTAAGTCCT+AGG | + | chr7_1:72455338-72455357 | None:intergenic | 40.0% | |
| ATTATAAGTTTGCCATGCGC+CGG | + | chr7_1:72455855-72455874 | None:intergenic | 40.0% | |
| GTCTTCATGATGACCATGTA+CGG | - | chr7_1:72455942-72455961 | Msa1036210:CDS | 40.0% | |
| TCTTCATGATGACCATGTAC+GGG | - | chr7_1:72455943-72455962 | Msa1036210:CDS | 40.0% | |
| !! | TTTTGCTTTTGACCCGTACA+TGG | + | chr7_1:72455958-72455977 | None:intergenic | 40.0% |
| TGAAAAGGAGTTCAAACAGC+TGG | - | chr7_1:72455986-72456005 | Msa1036210:CDS | 40.0% | |
| GAAAAGGAGTTCAAACAGCT+GGG | - | chr7_1:72455987-72456006 | Msa1036210:CDS | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+TGG | + | chr7_1:72456493-72456512 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr7_1:72456493-72456512 | Msa1036210:CDS | 40.0% |
| GGGAGTAATATTTGCTTGAG+TGG | - | chr7_1:72456513-72456532 | Msa1036210:CDS | 40.0% | |
| TTCTACATGCACGTCTCAAA+TGG | - | chr7_1:72456582-72456601 | Msa1036210:five_prime_UTR | 40.0% | |
| TCTACATGCACGTCTCAAAT+GGG | - | chr7_1:72456583-72456602 | Msa1036210:five_prime_UTR | 40.0% | |
| AGTAGCCACAACAGTATATG+CGG | + | chr7_1:72456644-72456663 | None:intergenic | 40.0% | |
| AGGAAGCAACCTTCCTATGT+CGG | - | chr7_1:72454295-72454314 | Msa1036210:three_prime_UTR | 45.0% | |
| AAAATCTCGGAAGCCGACAT+AGG | + | chr7_1:72454311-72454330 | None:intergenic | 45.0% | |
| !!! | TATGTCGGCTTCCGAGATTT+TGG | - | chr7_1:72454310-72454329 | Msa1036210:three_prime_UTR | 45.0% |
| TTGGCAATTGTTCGCCCAAA+CGG | - | chr7_1:72454329-72454348 | Msa1036210:three_prime_UTR | 45.0% | |
| ATAACCTGGAACGTATGCTC+AGG | - | chr7_1:72454366-72454385 | Msa1036210:three_prime_UTR | 45.0% | |
| !! | GAGGAGCACTTGATGAGTAA+TGG | - | chr7_1:72454413-72454432 | Msa1036210:three_prime_UTR | 45.0% |
| AAAGTTCTCACTTGCAGAGG+TGG | - | chr7_1:72454442-72454461 | Msa1036210:three_prime_UTR | 45.0% | |
| AAGTTCTCACTTGCAGAGGT+GGG | - | chr7_1:72454443-72454462 | Msa1036210:three_prime_UTR | 45.0% | |
| ! | GTGGTGTTGAAGCATGTAAG+GGG | + | chr7_1:72454507-72454526 | None:intergenic | 45.0% |
| ! | GGTGGTGTTGAAGCATGTAA+GGG | + | chr7_1:72454508-72454527 | None:intergenic | 45.0% |
| ! | TGGTGGTGTTGAAGCATGTA+AGG | + | chr7_1:72454509-72454528 | None:intergenic | 45.0% |
| TTACATGCTTCAACACCACC+AGG | - | chr7_1:72454508-72454527 | Msa1036210:three_prime_UTR | 45.0% | |
| AACCATTCCGGAAGGTGAAT+GGG | - | chr7_1:72454710-72454729 | Msa1036210:three_prime_UTR | 45.0% | |
| ! | ATACGATGGGTTTCGTAGTG+TGG | - | chr7_1:72454837-72454856 | Msa1036210:three_prime_UTR | 45.0% |
| ! | GAAACTTTAGTGGATGTCGG+AGG | - | chr7_1:72454859-72454878 | Msa1036210:three_prime_UTR | 45.0% |
| ACTTGGCATTTAAGCAGGGT+CGG | - | chr7_1:72455067-72455086 | Msa1036210:CDS | 45.0% | |
| GGTCGGCACAATAAATTGTG+AGG | - | chr7_1:72455084-72455103 | Msa1036210:CDS | 45.0% | |
| ! | CTAGGTTGAAGACACTGTGA+AGG | + | chr7_1:72455320-72455339 | None:intergenic | 45.0% |
| CTTCACAGTGTCTTCAACCT+AGG | - | chr7_1:72455318-72455337 | Msa1036210:intron | 45.0% | |
| ATAGGCATAACCCATGTTGG+TGG | - | chr7_1:72455616-72455635 | Msa1036210:intron | 45.0% | |
| TGGAGACGCTATCCTGATAA+AGG | - | chr7_1:72455663-72455682 | Msa1036210:intron | 45.0% | |
| CACTTGCAGTGGTTGTGTTT+GGG | - | chr7_1:72455774-72455793 | Msa1036210:CDS | 45.0% | |
| ACCAGGTCAAAGGCTTTACT+AGG | - | chr7_1:72455912-72455931 | Msa1036210:CDS | 45.0% | |
| ACCTAGTAAAGCCTTTGACC+TGG | + | chr7_1:72455916-72455935 | None:intergenic | 45.0% | |
| AGGTCAAAGGCTTTACTAGG+TGG | - | chr7_1:72455915-72455934 | Msa1036210:CDS | 45.0% | |
| GGTCAAAGGCTTTACTAGGT+GGG | - | chr7_1:72455916-72455935 | Msa1036210:CDS | 45.0% | |
| GATTGTTGTAGCGAGTACGT+TGG | - | chr7_1:72456123-72456142 | Msa1036210:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr7_1:72456492-72456511 | Msa1036210:CDS | 45.0% |
| ACAACCTGAGCATACGTTCC+AGG | + | chr7_1:72454373-72454392 | None:intergenic | 50.0% | |
| TCAACCACGTCCTTAAGGAG+AGG | + | chr7_1:72454676-72454695 | None:intergenic | 50.0% | |
| TCTCCTTAAGGACGTGGTTG+AGG | - | chr7_1:72454675-72454694 | Msa1036210:three_prime_UTR | 50.0% | |
| ACCCATCCACAGAACCATTC+CGG | - | chr7_1:72454698-72454717 | Msa1036210:three_prime_UTR | 50.0% | |
| ! | TCCGGAATGGTTCTGTGGAT+GGG | + | chr7_1:72454702-72454721 | None:intergenic | 50.0% |
| ! | TTCCGGAATGGTTCTGTGGA+TGG | + | chr7_1:72454703-72454722 | None:intergenic | 50.0% |
| ATCCACAGAACCATTCCGGA+AGG | - | chr7_1:72454702-72454721 | Msa1036210:three_prime_UTR | 50.0% | |
| GAACCATTCCGGAAGGTGAA+TGG | - | chr7_1:72454709-72454728 | Msa1036210:three_prime_UTR | 50.0% | |
| ACCATTCCGGAAGGTGAATG+GGG | - | chr7_1:72454711-72454730 | Msa1036210:three_prime_UTR | 50.0% | |
| AGTGGCATCACCACCAACAT+GGG | + | chr7_1:72455629-72455648 | None:intergenic | 50.0% | |
| TCCACGAGGAACAAACTCAG+TGG | + | chr7_1:72455647-72455666 | None:intergenic | 50.0% | |
| CCAAACACAACCACTGCAAG+TGG | + | chr7_1:72455776-72455795 | None:intergenic | 50.0% | |
| CCACTTGCAGTGGTTGTGTT+TGG | - | chr7_1:72455773-72455792 | Msa1036210:CDS | 50.0% | |
| GAATTGCCATCGCACTCTTC+CGG | - | chr7_1:72455833-72455852 | Msa1036210:CDS | 50.0% | |
| TCTCGGAAGCCGACATAGGA+AGG | + | chr7_1:72454307-72454326 | None:intergenic | 55.0% | |
| GCAATTGTTCGCCCAAACGG+AGG | - | chr7_1:72454332-72454351 | Msa1036210:three_prime_UTR | 55.0% | |
| ATTGTTCGCCCAAACGGAGG+AGG | - | chr7_1:72454335-72454354 | Msa1036210:three_prime_UTR | 55.0% | |
| TTGTTCGCCCAAACGGAGGA+GGG | - | chr7_1:72454336-72454355 | Msa1036210:three_prime_UTR | 55.0% | |
| AGGAGGGGAAGCAGATAACC+TGG | - | chr7_1:72454352-72454371 | Msa1036210:three_prime_UTR | 55.0% | |
| AGCATGCGTATATGAGGGCC+TGG | - | chr7_1:72454650-72454669 | Msa1036210:three_prime_UTR | 55.0% | |
| GGTCCTCAACCACGTCCTTA+AGG | + | chr7_1:72454681-72454700 | None:intergenic | 55.0% | |
| ! | CACCTTCCGGAATGGTTCTG+TGG | + | chr7_1:72454707-72454726 | None:intergenic | 55.0% |
| TCCCCATTCACCTTCCGGAA+TGG | + | chr7_1:72454715-72454734 | None:intergenic | 55.0% | |
| CTGGTTCCCCATTCACCTTC+CGG | + | chr7_1:72454720-72454739 | None:intergenic | 55.0% | |
| GTAGGGTCGGCCCAAACATA+AGG | + | chr7_1:72455475-72455494 | None:intergenic | 55.0% | |
| CAGTGGCATCACCACCAACA+TGG | + | chr7_1:72455630-72455649 | None:intergenic | 55.0% | |
| ! | GCCACTGAGTTTGTTCCTCG+TGG | - | chr7_1:72455643-72455662 | Msa1036210:intron | 55.0% |
| ATCAGGATAGCGTCTCCACG+AGG | + | chr7_1:72455661-72455680 | None:intergenic | 55.0% | |
| TTGTGATCCTGTGCTGCCAG+AGG | - | chr7_1:72455875-72455894 | Msa1036210:CDS | 55.0% | |
| !! | GGACGAAAGCACCAGGTCAA+AGG | - | chr7_1:72455902-72455921 | Msa1036210:CDS | 55.0% |
| GGAGTTCAAACAGCTGGGTG+TGG | - | chr7_1:72455992-72456011 | Msa1036210:CDS | 55.0% | |
| CGTCGCCGCATATACTGTTG+TGG | - | chr7_1:72456636-72456655 | Msa1036210:five_prime_UTR | 55.0% | |
| TGTTCGCCCAAACGGAGGAG+GGG | - | chr7_1:72454337-72454356 | Msa1036210:three_prime_UTR | 60.0% | |
| CTGCTTCCCCTCCTCCGTTT+GGG | + | chr7_1:72454346-72454365 | None:intergenic | 60.0% | |
| TCTGCTTCCCCTCCTCCGTT+TGG | + | chr7_1:72454347-72454366 | None:intergenic | 60.0% | |
| CACGTCCTTAAGGAGAGGCC+AGG | + | chr7_1:72454671-72454690 | None:intergenic | 60.0% | |
| CTGGCCTCTCCTTAAGGACG+TGG | - | chr7_1:72454669-72454688 | Msa1036210:three_prime_UTR | 60.0% | |
| GTGGATGTCGGAGGCAGTAC+AGG | - | chr7_1:72454868-72454887 | Msa1036210:three_prime_UTR | 60.0% | |
| GCAAGTGCATCCCAACTCCC+AGG | - | chr7_1:72454967-72454986 | Msa1036210:three_prime_UTR | 60.0% | |
| TCCTGTGCTGCCAGAGGTGA+CGG | - | chr7_1:72455881-72455900 | Msa1036210:CDS | 60.0% | |
| GTGCTTTCGTCCGTCACCTC+TGG | + | chr7_1:72455894-72455913 | None:intergenic | 60.0% | |
| !! | AGGTGACGGACGAAAGCACC+AGG | - | chr7_1:72455895-72455914 | Msa1036210:CDS | 60.0% |
| AAACAGCTGGGTGTGGCTGC+TGG | - | chr7_1:72455999-72456018 | Msa1036210:CDS | 60.0% | |
| GAGGGCCTGGCCTCTCCTTA+AGG | - | chr7_1:72454663-72454682 | Msa1036210:three_prime_UTR | 65.0% | |
| ! | CATGCGCCGGAAGAGTGCGA+TGG | + | chr7_1:72455842-72455861 | None:intergenic | 65.0% |
| CATCGCACTCTTCCGGCGCA+TGG | - | chr7_1:72455840-72455859 | Msa1036210:CDS | 65.0% | |
| TCCGTCACCTCTGGCAGCAC+AGG | + | chr7_1:72455885-72455904 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 72454012 | 72456737 | 72454012 | ID=Msa1036210;Name=Msa1036210 |
| chr7_1 | mRNA | 72454012 | 72456737 | 72454012 | ID=Msa1036210-mRNA-1;Parent=Msa1036210;Name=Msa1036210-mRNA-1;_AED=0.08;_eAED=0.08;_QI=176|1|1|1|0.5|0.66|3|1029|255 |
| chr7_1 | exon | 72454012 | 72455129 | 72454012 | ID=Msa1036210-mRNA-1:exon:17671;Parent=Msa1036210-mRNA-1 |
| chr7_1 | exon | 72455761 | 72456097 | 72455761 | ID=Msa1036210-mRNA-1:exon:17670;Parent=Msa1036210-mRNA-1 |
| chr7_1 | exon | 72456220 | 72456737 | 72456220 | ID=Msa1036210-mRNA-1:exon:17669;Parent=Msa1036210-mRNA-1 |
| chr7_1 | five_prime_UTR | 72456562 | 72456737 | 72456562 | ID=Msa1036210-mRNA-1:five_prime_utr;Parent=Msa1036210-mRNA-1 |
| chr7_1 | CDS | 72456220 | 72456561 | 72456220 | ID=Msa1036210-mRNA-1:cds;Parent=Msa1036210-mRNA-1 |
| chr7_1 | CDS | 72455761 | 72456097 | 72455761 | ID=Msa1036210-mRNA-1:cds;Parent=Msa1036210-mRNA-1 |
| chr7_1 | CDS | 72455041 | 72455129 | 72455041 | ID=Msa1036210-mRNA-1:cds;Parent=Msa1036210-mRNA-1 |
| chr7_1 | three_prime_UTR | 72454012 | 72455040 | 72454012 | ID=Msa1036210-mRNA-1:three_prime_utr;Parent=Msa1036210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
