Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076470 | XP_027333989.1 | 61.587 | 315 | 120 | 1 | 2 | 316 | 24 | 337 | 1.55e-142 | 417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076470 | sp|I1M2U5|NAMT1_SOYBN | 54.603 | 315 | 141 | 2 | 2 | 316 | 11 | 323 | 3.02e-128 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076470 | A0A1S2YDS4 | 58.730 | 315 | 129 | 1 | 2 | 316 | 16 | 329 | 6.70e-142 | 414 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0142240 | Msa1076470 | 0.812252 | 4.653973e-51 | -8.615850e-47 |
| Msa0201330 | Msa1076470 | 0.811571 | 6.549007e-51 | -8.615850e-47 |
| Msa0436900 | Msa1076470 | 0.817588 | 3.051331e-52 | -8.615850e-47 |
| Msa1036210 | Msa1076470 | 0.816391 | 5.665844e-52 | -8.615850e-47 |
| Msa1076460 | Msa1076470 | 0.876813 | 1.035552e-68 | -8.615850e-47 |
| Msa1076470 | Msa1076480 | 0.893347 | 6.838695e-75 | -8.615850e-47 |
| Msa1076470 | Msa1083410 | 0.829573 | 4.771706e-55 | -8.615850e-47 |
| Msa1076470 | Msa1122660 | 0.817946 | 2.532351e-52 | -8.615850e-47 |
| Msa1076470 | Msa1220710 | 0.810141 | 1.335931e-50 | -8.615850e-47 |
| Msa1076470 | Msa1246040 | 0.807688 | 4.473344e-50 | -8.615850e-47 |
| Msa1076470 | Msa1265660 | 0.802154 | 6.418865e-49 | -8.615850e-47 |
| Msa1076470 | Msa1267200 | 0.819353 | 1.214621e-52 | -8.615850e-47 |
| Msa1076470 | Msa1303570 | 0.815854 | 7.467975e-52 | -8.615850e-47 |
| Msa1076470 | Msa1303640 | 0.820209 | 7.741323e-53 | -8.615850e-47 |
| Msa0243910 | Msa1076470 | 0.824891 | 6.314476e-54 | -8.615850e-47 |
| Msa0847390 | Msa1076470 | 0.808952 | 2.405320e-50 | -8.615850e-47 |
| Msa0886660 | Msa1076470 | 0.804516 | 2.081092e-49 | -8.615850e-47 |
| Msa0968320 | Msa1076470 | -0.812107 | 5.008009e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076470 | MtrunA17_Chr3g0130061 | 59.048 | 315 | 128 | 1 | 2 | 316 | 13 | 326 | 1.01e-144 | 412 |
| Msa1076470 | MtrunA17_Chr3g0130011 | 58.095 | 315 | 131 | 1 | 2 | 316 | 13 | 326 | 5.83e-140 | 399 |
| Msa1076470 | MtrunA17_Chr2g0314271 | 53.185 | 314 | 145 | 2 | 3 | 316 | 11 | 322 | 4.01e-128 | 369 |
| Msa1076470 | MtrunA17_Chr3g0128011 | 35.737 | 319 | 195 | 7 | 3 | 316 | 72 | 385 | 7.22e-56 | 186 |
| Msa1076470 | MtrunA17_Chr7g0218181 | 35.671 | 328 | 175 | 10 | 6 | 316 | 26 | 334 | 1.37e-55 | 184 |
| Msa1076470 | MtrunA17_Chr1g0163621 | 38.361 | 305 | 175 | 8 | 18 | 313 | 49 | 349 | 1.57e-54 | 182 |
| Msa1076470 | MtrunA17_Chr1g0163611 | 37.217 | 309 | 177 | 11 | 18 | 316 | 35 | 336 | 3.04e-54 | 181 |
| Msa1076470 | MtrunA17_Chr8g0367441 | 34.076 | 314 | 197 | 5 | 9 | 316 | 36 | 345 | 5.83e-54 | 180 |
| Msa1076470 | MtrunA17_Chr2g0307521 | 33.945 | 327 | 188 | 7 | 2 | 313 | 16 | 329 | 1.33e-53 | 179 |
| Msa1076470 | MtrunA17_Chr7g0218131 | 35.016 | 317 | 195 | 6 | 6 | 316 | 26 | 337 | 1.69e-53 | 179 |
| Msa1076470 | MtrunA17_Chr7g0218211 | 35.161 | 310 | 193 | 5 | 6 | 309 | 25 | 332 | 2.02e-53 | 179 |
| Msa1076470 | MtrunA17_Chr7g0276411 | 32.895 | 304 | 195 | 4 | 9 | 306 | 21 | 321 | 2.74e-53 | 178 |
| Msa1076470 | MtrunA17_Chr5g0448091 | 32.602 | 319 | 206 | 7 | 3 | 316 | 17 | 331 | 6.27e-52 | 175 |
| Msa1076470 | MtrunA17_Chr1g0163601 | 35.404 | 322 | 193 | 9 | 4 | 316 | 21 | 336 | 8.21e-52 | 174 |
| Msa1076470 | MtrunA17_Chr1g0200491 | 35.535 | 318 | 194 | 6 | 4 | 313 | 24 | 338 | 4.52e-51 | 172 |
| Msa1076470 | MtrunA17_Chr7g0218271 | 34.628 | 309 | 190 | 6 | 15 | 313 | 35 | 341 | 1.02e-50 | 172 |
| Msa1076470 | MtrunA17_Chr7g0218261 | 33.866 | 313 | 199 | 5 | 6 | 313 | 25 | 334 | 1.92e-50 | 171 |
| Msa1076470 | MtrunA17_Chr7g0218301 | 34.139 | 331 | 180 | 9 | 6 | 313 | 26 | 341 | 2.08e-50 | 171 |
| Msa1076470 | MtrunA17_Chr8g0367491 | 31.230 | 317 | 208 | 5 | 6 | 316 | 32 | 344 | 2.49e-50 | 171 |
| Msa1076470 | MtrunA17_Chr8g0367451 | 32.566 | 304 | 196 | 4 | 9 | 306 | 35 | 335 | 5.70e-50 | 170 |
| Msa1076470 | MtrunA17_Chr7g0276401 | 31.935 | 310 | 204 | 5 | 10 | 316 | 38 | 343 | 2.27e-48 | 166 |
| Msa1076470 | MtrunA17_Chr8g0367501 | 31.310 | 313 | 205 | 5 | 10 | 315 | 23 | 332 | 8.23e-48 | 165 |
| Msa1076470 | MtrunA17_Chr8g0367381 | 31.529 | 314 | 186 | 6 | 9 | 316 | 36 | 326 | 1.66e-45 | 157 |
| Msa1076470 | MtrunA17_Chr8g0345851 | 35.345 | 232 | 146 | 4 | 85 | 316 | 31 | 258 | 6.99e-44 | 152 |
| Msa1076470 | MtrunA17_Chr3g0085211 | 34.583 | 240 | 151 | 4 | 62 | 297 | 84 | 321 | 3.33e-39 | 141 |
| Msa1076470 | MtrunA17_Chr3g0085201 | 32.567 | 261 | 164 | 4 | 62 | 315 | 71 | 326 | 5.73e-39 | 140 |
| Msa1076470 | MtrunA17_Chr4g0022021 | 32.727 | 275 | 176 | 7 | 20 | 290 | 43 | 312 | 8.18e-36 | 132 |
| Msa1076470 | MtrunA17_Chr4g0021981 | 28.808 | 302 | 202 | 9 | 20 | 316 | 43 | 336 | 1.61e-30 | 118 |
| Msa1076470 | MtrunA17_Chr6g0482291 | 39.073 | 151 | 81 | 3 | 166 | 316 | 5 | 144 | 2.98e-30 | 112 |
| Msa1076470 | MtrunA17_Chr5g0432251 | 28.053 | 303 | 205 | 9 | 20 | 315 | 32 | 328 | 3.08e-28 | 112 |
| Msa1076470 | MtrunA17_Chr7g0223241 | 28.197 | 305 | 194 | 9 | 18 | 313 | 29 | 317 | 8.11e-28 | 110 |
| Msa1076470 | MtrunA17_Chr1g0188391 | 26.537 | 309 | 204 | 10 | 20 | 316 | 32 | 329 | 6.21e-26 | 105 |
| Msa1076470 | MtrunA17_Chr8g0367401 | 49.462 | 93 | 46 | 1 | 156 | 248 | 19 | 110 | 1.33e-24 | 97.1 |
| Msa1076470 | MtrunA17_Chr1g0188371 | 25.413 | 303 | 214 | 8 | 18 | 313 | 30 | 327 | 3.99e-24 | 101 |
| Msa1076470 | MtrunA17_Chr3g0121301 | 35.119 | 168 | 105 | 4 | 121 | 286 | 134 | 299 | 1.09e-23 | 99.8 |
| Msa1076470 | MtrunA17_Chr4g0014561 | 27.759 | 299 | 199 | 9 | 20 | 307 | 32 | 324 | 1.67e-23 | 99.0 |
| Msa1076470 | MtrunA17_Chr7g0219161 | 25.503 | 298 | 210 | 7 | 20 | 311 | 32 | 323 | 3.00e-23 | 98.6 |
| Msa1076470 | MtrunA17_Chr5g0432261 | 26.885 | 305 | 178 | 9 | 20 | 315 | 28 | 296 | 1.16e-22 | 96.3 |
| Msa1076470 | MtrunA17_Chr4g0014681 | 27.425 | 299 | 200 | 9 | 20 | 307 | 32 | 324 | 1.34e-22 | 96.7 |
| Msa1076470 | MtrunA17_Chr4g0040621 | 27.362 | 307 | 199 | 10 | 20 | 315 | 45 | 338 | 1.54e-22 | 96.7 |
| Msa1076470 | MtrunA17_Chr4g0046531 | 25.243 | 309 | 207 | 9 | 18 | 315 | 30 | 325 | 9.52e-22 | 95.9 |
| Msa1076470 | MtrunA17_Chr4g0046531 | 25.243 | 309 | 207 | 9 | 18 | 315 | 392 | 687 | 4.33e-21 | 94.0 |
| Msa1076470 | MtrunA17_Chr5g0432301 | 25.743 | 303 | 212 | 9 | 20 | 315 | 33 | 329 | 1.96e-21 | 93.2 |
| Msa1076470 | MtrunA17_Chr5g0432241 | 26.603 | 312 | 198 | 16 | 20 | 315 | 33 | 329 | 2.45e-21 | 93.2 |
| Msa1076470 | MtrunA17_Chr7g0219141 | 26.174 | 298 | 208 | 7 | 20 | 311 | 32 | 323 | 4.25e-21 | 92.4 |
| Msa1076470 | MtrunA17_Chr7g0223231 | 26.000 | 300 | 207 | 7 | 18 | 313 | 29 | 317 | 4.79e-21 | 92.0 |
| Msa1076470 | MtrunA17_Chr5g0432211 | 25.490 | 306 | 195 | 10 | 20 | 315 | 32 | 314 | 1.42e-20 | 90.5 |
| Msa1076470 | MtrunA17_Chr4g0014641 | 26.087 | 299 | 204 | 9 | 20 | 307 | 32 | 324 | 1.80e-20 | 90.5 |
| Msa1076470 | MtrunA17_Chr4g0046361 | 26.797 | 306 | 207 | 10 | 20 | 315 | 32 | 330 | 1.02e-19 | 88.6 |
| Msa1076470 | MtrunA17_Chr1g0170941 | 52.632 | 76 | 35 | 1 | 171 | 246 | 2 | 76 | 2.68e-18 | 78.2 |
| Msa1076470 | MtrunA17_Chr4g0046341 | 27.157 | 313 | 200 | 10 | 20 | 315 | 32 | 333 | 3.25e-16 | 78.6 |
| Msa1076470 | MtrunA17_Chr4g0014661 | 27.541 | 305 | 206 | 10 | 13 | 309 | 23 | 320 | 5.08e-16 | 77.8 |
| Msa1076470 | MtrunA17_Chr8g0367421 | 39.785 | 93 | 38 | 1 | 156 | 248 | 19 | 93 | 1.44e-14 | 69.3 |
| Msa1076470 | MtrunA17_Chr4g0014591 | 28.000 | 250 | 169 | 8 | 13 | 257 | 23 | 266 | 2.03e-13 | 70.1 |
| Msa1076470 | MtrunA17_Chr8g0367471 | 47.458 | 59 | 30 | 1 | 172 | 230 | 11 | 68 | 2.91e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076470 | AT3G53140.1 | 51.097 | 319 | 151 | 2 | 2 | 316 | 10 | 327 | 1.02e-118 | 346 |
| Msa1076470 | AT5G54160.1 | 37.931 | 319 | 186 | 9 | 3 | 316 | 18 | 329 | 3.07e-62 | 202 |
| Msa1076470 | AT1G51990.1 | 36.538 | 260 | 157 | 5 | 62 | 316 | 74 | 330 | 6.75e-53 | 177 |
| Msa1076470 | AT1G51990.2 | 36.154 | 260 | 158 | 5 | 62 | 316 | 74 | 330 | 1.23e-51 | 174 |
| Msa1076470 | AT1G33030.1 | 32.278 | 316 | 198 | 8 | 9 | 316 | 11 | 318 | 2.44e-42 | 150 |
| Msa1076470 | AT1G77520.1 | 31.034 | 319 | 204 | 8 | 10 | 316 | 35 | 349 | 1.06e-40 | 146 |
| Msa1076470 | AT5G53810.1 | 33.663 | 303 | 183 | 11 | 18 | 306 | 39 | 337 | 3.38e-35 | 131 |
| Msa1076470 | AT1G21120.1 | 33.910 | 289 | 179 | 7 | 6 | 286 | 27 | 311 | 3.31e-32 | 123 |
| Msa1076470 | AT1G77530.1 | 33.540 | 322 | 182 | 13 | 15 | 316 | 40 | 349 | 6.12e-32 | 122 |
| Msa1076470 | AT1G21120.2 | 33.910 | 289 | 179 | 7 | 6 | 286 | 75 | 359 | 1.03e-31 | 123 |
| Msa1076470 | AT1G21100.1 | 33.564 | 289 | 180 | 7 | 6 | 286 | 27 | 311 | 1.99e-31 | 121 |
| Msa1076470 | AT1G63140.2 | 30.794 | 315 | 204 | 7 | 13 | 316 | 38 | 349 | 3.05e-31 | 120 |
| Msa1076470 | AT1G63140.4 | 30.794 | 315 | 204 | 7 | 13 | 316 | 58 | 369 | 4.16e-31 | 120 |
| Msa1076470 | AT1G21130.1 | 33.564 | 289 | 180 | 7 | 6 | 286 | 27 | 311 | 8.61e-31 | 119 |
| Msa1076470 | AT1G21110.1 | 33.218 | 289 | 181 | 7 | 6 | 286 | 27 | 311 | 1.89e-30 | 118 |
| Msa1076470 | AT1G76790.1 | 31.481 | 324 | 202 | 10 | 6 | 315 | 17 | 334 | 2.81e-30 | 118 |
| Msa1076470 | AT5G37170.1 | 31.200 | 250 | 139 | 8 | 62 | 306 | 72 | 293 | 1.51e-28 | 112 |
| Msa1076470 | AT5G37170.2 | 34.921 | 189 | 116 | 6 | 123 | 306 | 7 | 193 | 5.74e-28 | 108 |
| Msa1076470 | AT1G33030.3 | 31.746 | 252 | 158 | 6 | 9 | 252 | 11 | 256 | 4.97e-27 | 107 |
| Msa1076470 | AT5G37170.3 | 40.876 | 137 | 77 | 4 | 172 | 306 | 11 | 145 | 2.99e-26 | 103 |
| Msa1076470 | AT1G33030.2 | 31.855 | 248 | 155 | 6 | 9 | 248 | 11 | 252 | 7.65e-26 | 103 |
| Msa1076470 | AT1G62900.1 | 37.267 | 161 | 99 | 2 | 156 | 316 | 15 | 173 | 1.02e-25 | 102 |
| Msa1076470 | AT4G35160.1 | 29.730 | 296 | 188 | 8 | 2 | 286 | 27 | 313 | 1.76e-23 | 99.8 |
| Msa1076470 | AT1G21130.2 | 34.263 | 251 | 154 | 6 | 6 | 248 | 27 | 274 | 4.30e-22 | 94.4 |
| Msa1076470 | AT1G63140.1 | 31.174 | 247 | 157 | 6 | 13 | 248 | 58 | 302 | 6.07e-20 | 88.6 |
| Msa1076470 | AT4G35150.1 | 27.526 | 287 | 163 | 9 | 2 | 286 | 13 | 256 | 4.41e-19 | 86.7 |
| Msa1076470 | AT1G77530.2 | 32.174 | 230 | 131 | 9 | 15 | 227 | 40 | 261 | 4.46e-13 | 68.6 |
| Msa1076470 | AT1G63140.3 | 29.864 | 221 | 142 | 6 | 13 | 222 | 58 | 276 | 1.90e-12 | 67.0 |
Find 133 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGCTTCCTTTGTTGAAAA+TGG | 0.201432 | 7_2:+74987086 | None:intergenic |
| GATGCACTTGCAACAATTTC+GGG | 0.208479 | 7_2:+74986413 | None:intergenic |
| AATAGTTAATAAGGATAATT+TGG | 0.212935 | 7_2:-74984957 | Msa1076470:three_prime_UTR |
| TGTGGCTACTGCTATTAATT+TGG | 0.223017 | 7_2:-74984709 | Msa1076470:three_prime_UTR |
| TGTTCCATATAATCTTATTT+TGG | 0.230280 | 7_2:-74985214 | Msa1076470:three_prime_UTR |
| AAAACCAAAATAAGATTATA+TGG | 0.250414 | 7_2:+74985210 | None:intergenic |
| TTAAACAACTTCATTTGTTC+TGG | 0.260799 | 7_2:+74986605 | None:intergenic |
| AAACTAACCAATAGTTAATA+AGG | 0.261463 | 7_2:-74984966 | Msa1076470:three_prime_UTR |
| GGATGCACTTGCAACAATTT+CGG | 0.264494 | 7_2:+74986412 | None:intergenic |
| TACTGCTATTAATTTGGTTT+CGG | 0.285189 | 7_2:-74984703 | Msa1076470:three_prime_UTR |
| AGCAAAACATAGAACTTAAA+AGG | 0.292679 | 7_2:-74985393 | Msa1076470:exon |
| TTGATTCCCTTGCTAATGTT+TGG | 0.298354 | 7_2:+74986446 | None:intergenic |
| CCACTTGCAGTGGTTGTGTT+TGG | 0.298953 | 7_2:-74985591 | Msa1076470:intron |
| CACTTGCAGTGGTTGTGTTT+GGG | 0.301970 | 7_2:-74985590 | Msa1076470:intron |
| GTAGTGTGCAGAGTATTAAT+TGG | 0.305171 | 7_2:+74985008 | None:intergenic |
| AAATTATCCTTATTAACTAT+TGG | 0.314472 | 7_2:+74984959 | None:intergenic |
| TCTGCTTCCCCTCCTCCGTT+TGG | 0.331094 | 7_2:+74987024 | None:intergenic |
| CTGGTTCCCCATTCACCTTC+CGG | 0.342630 | 7_2:+74986651 | None:intergenic |
| CTGCTTCCCCTCCTCCGTTT+GGG | 0.348793 | 7_2:+74987025 | None:intergenic |
| TATGTCGGCTTCCGAGATTT+TGG | 0.350091 | 7_2:-74987058 | Msa1076470:CDS |
| AAGAAGGGACACTCATTAGA+TGG | 0.354636 | 7_2:+74987145 | None:intergenic |
| CCTTTGTTGAAAATGGTATT+CGG | 0.362610 | 7_2:+74987093 | None:intergenic |
| CGGAACATCTAGTTCAATTA+CGG | 0.368181 | 7_2:+74987113 | None:intergenic |
| TGATTCCCTTGCTAATGTTT+GGG | 0.371395 | 7_2:+74986447 | None:intergenic |
| TTCTACATGCACGTCTCAAA+TGG | 0.375171 | 7_2:-74984781 | Msa1076470:three_prime_UTR |
| GAATTGCCATCGCACTCTTC+CGG | 0.392975 | 7_2:-74985531 | Msa1076470:CDS |
| AACCATTCCGGAAGGTGAAT+GGG | 0.395689 | 7_2:-74986658 | Msa1076470:CDS |
| GTAATATTTGCTTGAGTGGT+GGG | 0.410185 | 7_2:-74984846 | Msa1076470:three_prime_UTR |
| ACCCATCCACAGAACCATTC+CGG | 0.411495 | 7_2:-74986670 | Msa1076470:CDS |
| ACAACCTGAGCATACGTTCC+AGG | 0.411672 | 7_2:+74986998 | None:intergenic |
| AACTAGTATACCTGGGAGTT+GGG | 0.411741 | 7_2:+74986391 | None:intergenic |
| TATCTTTGAGGAGCACTTGA+TGG | 0.413792 | 7_2:-74986962 | Msa1076470:CDS |
| GAGGGTCTGGCCTCTCCTTA+AGG | 0.419554 | 7_2:-74986705 | Msa1076470:CDS |
| TTCCGGAATGGTTCTGTGGA+TGG | 0.419718 | 7_2:+74986668 | None:intergenic |
| TTGCATAGCATGCGTATATG+AGG | 0.420769 | 7_2:-74986724 | Msa1076470:intron |
| AAACTAGTATACCTGGGAGT+TGG | 0.430030 | 7_2:+74986390 | None:intergenic |
| GGTCCTCAACCACGTCCTTA+AGG | 0.435556 | 7_2:+74986690 | None:intergenic |
| AAGAATAACGAAAACTTGTA+TGG | 0.436015 | 7_2:+74987231 | None:intergenic |
| GAGGAGCACTTGATGGGTAA+TGG | 0.444893 | 7_2:-74986955 | Msa1076470:CDS |
| ACGTATGCTCAGGTTGTTAA+CGG | 0.445131 | 7_2:-74986992 | Msa1076470:CDS |
| AAACAGCTGGGTGTGGCTGC+CGG | 0.445661 | 7_2:-74985365 | Msa1076470:three_prime_UTR |
| GAACCATTCCGGAAGGTGAA+TGG | 0.449823 | 7_2:-74986659 | Msa1076470:CDS |
| AGTCTTTCAGATTGAATAAG+TGG | 0.452614 | 7_2:-74985273 | Msa1076470:three_prime_UTR |
| TTGGCAATTGTTCGCCCAAA+CGG | 0.469424 | 7_2:-74987039 | Msa1076470:CDS |
| TGGAGACGCTATCCTGATAA+AGG | 0.472464 | 7_2:-74985701 | Msa1076470:intron |
| TATTGCATTGGAAACTGAAA+GGG | 0.474373 | 7_2:+74985058 | None:intergenic |
| TCTCCTTAAGGACGTGGTTG+AGG | 0.475785 | 7_2:-74986693 | Msa1076470:CDS |
| TGGTGGTGTTGAAGCATGTA+AGG | 0.478628 | 7_2:+74986862 | None:intergenic |
| GTGGATGTCGGAGGCAGTAC+AGG | 0.478932 | 7_2:-74986500 | Msa1076470:CDS |
| AACGGCTTACGATATCTTTG+AGG | 0.480985 | 7_2:-74986974 | Msa1076470:CDS |
| TTTACGTAAAAGTCATGTGC+TGG | 0.488023 | 7_2:+74986632 | None:intergenic |
| TTAAAAGGAGTTCAAACAGC+TGG | 0.489329 | 7_2:-74985378 | Msa1076470:exon |
| TCTACATGCACGTCTCAAAT+GGG | 0.490742 | 7_2:-74984780 | Msa1076470:three_prime_UTR |
| CATCGCACTCTTCCGGCGCA+TGG | 0.492823 | 7_2:-74985524 | Msa1076470:CDS |
| TCCGGAATGGTTCTGTGGAT+GGG | 0.493951 | 7_2:+74986669 | None:intergenic |
| TCCCCATTCACCTTCCGGAA+TGG | 0.494698 | 7_2:+74986656 | None:intergenic |
| TCCGTCACCTCTGGCAGCAC+AGG | 0.497598 | 7_2:+74985482 | None:intergenic |
| AGCATGCGTATATGAGGGTC+TGG | 0.499258 | 7_2:-74986718 | Msa1076470:CDS |
| GAATCATACGATGGGTTTCG+TGG | 0.501624 | 7_2:-74986536 | Msa1076470:CDS |
| ATTACGGCAACTAGAGAAGA+AGG | 0.503424 | 7_2:+74987129 | None:intergenic |
| TCGTGGTGTGGAAACTTTAG+TGG | 0.510458 | 7_2:-74986519 | Msa1076470:CDS |
| AATGATTAAAAGAAAGAGAA+TGG | 0.513366 | 7_2:+74984926 | None:intergenic |
| ACTTATTCAATCTGAAAGAC+TGG | 0.518427 | 7_2:+74985275 | None:intergenic |
| AGTAATATTTGCTTGAGTGG+TGG | 0.523637 | 7_2:-74984847 | Msa1076470:three_prime_UTR |
| ATTGTTCGCCCAAACGGAGG+AGG | 0.524896 | 7_2:-74987033 | Msa1076470:CDS |
| GTCTTCATGATGACCATGTA+CGG | 0.525468 | 7_2:-74985422 | Msa1076470:CDS |
| AAAGTTCTCACTTGCAGAGG+TGG | 0.525549 | 7_2:-74986926 | Msa1076470:CDS |
| ATCTTTGAGGAGCACTTGAT+GGG | 0.527298 | 7_2:-74986961 | Msa1076470:CDS |
| TCCTGTGCTGCCAGAGGTGA+CGG | 0.530070 | 7_2:-74985483 | Msa1076470:CDS |
| ACCAGGTCAAAGGCTTTACT+AGG | 0.533583 | 7_2:-74985452 | Msa1076470:CDS |
| GTGTGCAGAGTATTAATTGG+AGG | 0.535983 | 7_2:+74985011 | None:intergenic |
| TAATATTTGCTTGAGTGGTG+GGG | 0.536655 | 7_2:-74984845 | Msa1076470:three_prime_UTR |
| GACGAAACATAAATTAAAGA+TGG | 0.537470 | 7_2:+74984746 | None:intergenic |
| CTGGCCTCTCCTTAAGGACG+TGG | 0.540481 | 7_2:-74986699 | Msa1076470:CDS |
| TCTCGGAAGCCGACATAGGA+AGG | 0.542283 | 7_2:+74987064 | None:intergenic |
| ATACGATGGGTTTCGTGGTG+TGG | 0.545668 | 7_2:-74986531 | Msa1076470:CDS |
| ATTATAAGTTTGCCATGCGC+CGG | 0.546826 | 7_2:+74985512 | None:intergenic |
| GCGAACAATTGCCAAAATCT+CGG | 0.548219 | 7_2:+74987047 | None:intergenic |
| TTATTGCATTGGAAACTGAA+AGG | 0.548694 | 7_2:+74985057 | None:intergenic |
| GGGAGTAATATTTGCTTGAG+TGG | 0.548803 | 7_2:-74984850 | Msa1076470:three_prime_UTR |
| AAAATCTCGGAAGCCGACAT+AGG | 0.549653 | 7_2:+74987060 | None:intergenic |
| CAGCAGTGGTTGAAAACATT+CGG | 0.549722 | 7_2:-74987341 | Msa1076470:five_prime_UTR |
| CAGTGGCATCACCACCAACA+TGG | 0.551519 | 7_2:+74985737 | None:intergenic |
| AAACTTGTATGGATGTAAGA+AGG | 0.552599 | 7_2:+74987242 | None:intergenic |
| TTGTTCGCCCAAACGGAGGA+GGG | 0.561614 | 7_2:-74987032 | Msa1076470:CDS |
| GGACGAAAGTACCAGGTCAA+AGG | 0.567652 | 7_2:-74985462 | Msa1076470:CDS |
| AGAAGGGACACTCATTAGAT+GGG | 0.568213 | 7_2:+74987146 | None:intergenic |
| AGGTGACGGACGAAAGTACC+AGG | 0.570666 | 7_2:-74985469 | Msa1076470:CDS |
| ATTGAATAAGTGGAGCATGT+TGG | 0.574143 | 7_2:-74985263 | Msa1076470:three_prime_UTR |
| GCCACTGAGTTTGTTCCTCG+TGG | 0.574487 | 7_2:-74985721 | Msa1076470:CDS |
| TAAATTCCCAAACATTAGCA+AGG | 0.576073 | 7_2:-74986453 | Msa1076470:CDS |
| CATTTCTTTGCAGATTACAA+TGG | 0.576234 | 7_2:-74986477 | Msa1076470:CDS |
| GGAGTTCAAACAGCTGGGTG+TGG | 0.577947 | 7_2:-74985372 | Msa1076470:three_prime_UTR |
| AGGAGGGGAAGCAGATAACC+TGG | 0.579867 | 7_2:-74987016 | Msa1076470:CDS |
| TATATAGGCATAACCCATGT+TGG | 0.581114 | 7_2:-74985751 | Msa1076470:intron |
| TGTTCGCCCAAACGGAGGAG+GGG | 0.581679 | 7_2:-74987031 | Msa1076470:CDS |
| AGGAAGCAACCTTCCTATGT+CGG | 0.584154 | 7_2:-74987073 | Msa1076470:CDS |
| CACCTTCCGGAATGGTTCTG+TGG | 0.586048 | 7_2:+74986664 | None:intergenic |
| ATAACCTGGAACGTATGCTC+AGG | 0.589626 | 7_2:-74987002 | Msa1076470:CDS |
| GCAAGTGCATCCCAACTCCC+AGG | 0.592348 | 7_2:-74986401 | Msa1076470:intron |
| TAAAAGGAGTTCAAACAGCT+GGG | 0.592761 | 7_2:-74985377 | Msa1076470:three_prime_UTR |
| TAGAAAGTTCTCACTTGCAG+AGG | 0.598594 | 7_2:-74986929 | Msa1076470:CDS |
| TCTTCATGATGACCATGTAC+GGG | 0.603036 | 7_2:-74985421 | Msa1076470:CDS |
| ATAGGCATAACCCATGTTGG+TGG | 0.606921 | 7_2:-74985748 | Msa1076470:intron |
| TTACATGCTTCAACACCACC+AGG | 0.609500 | 7_2:-74986860 | Msa1076470:intron |
| ATTTGAAAATGAGCAAAGCA+AGG | 0.609873 | 7_2:-74987188 | Msa1076470:exon |
| AAGTTCTCACTTGCAGAGGT+GGG | 0.615623 | 7_2:-74986925 | Msa1076470:CDS |
| TGCATAGCATGCGTATATGA+GGG | 0.618704 | 7_2:-74986723 | Msa1076470:intron |
| GGTCAAAGGCTTTACTAGGT+GGG | 0.619833 | 7_2:-74985448 | Msa1076470:CDS |
| ACCATTCCGGAAGGTGAATG+GGG | 0.621557 | 7_2:-74986657 | Msa1076470:CDS |
| AGGTCAAAGGCTTTACTAGG+TGG | 0.624964 | 7_2:-74985449 | Msa1076470:CDS |
| ACCTAGTAAAGCCTTTGACC+TGG | 0.626791 | 7_2:+74985451 | None:intergenic |
| TCTCTTGCTGAAGATGAAGA+CGG | 0.627359 | 7_2:-74986898 | Msa1076470:CDS |
| TGTGCAGAGTATTAATTGGA+GGG | 0.627382 | 7_2:+74985012 | None:intergenic |
| GCAATTGTTCGCCCAAACGG+AGG | 0.629443 | 7_2:-74987036 | Msa1076470:CDS |
| GTGGAAACTTTAGTGGATGT+CGG | 0.631678 | 7_2:-74986512 | Msa1076470:CDS |
| CATGCGCCGGAAGAGTGCGA+TGG | 0.635476 | 7_2:+74985525 | None:intergenic |
| AAATTCCCAAACATTAGCAA+GGG | 0.640329 | 7_2:-74986452 | Msa1076470:CDS |
| AATGTAGTGCAAGTATGATG+AGG | 0.641930 | 7_2:-74985553 | Msa1076470:CDS |
| AGTGGCATCACCACCAACAT+GGG | 0.643457 | 7_2:+74985738 | None:intergenic |
| AATAATGTGATGTGCAGCAG+TGG | 0.659838 | 7_2:-74987355 | Msa1076470:five_prime_UTR |
| TCAACCACGTCCTTAAGGAG+AGG | 0.660229 | 7_2:+74986695 | None:intergenic |
| GGTGGTGTTGAAGCATGTAA+GGG | 0.663090 | 7_2:+74986863 | None:intergenic |
| ATCCACAGAACCATTCCGGA+AGG | 0.665153 | 7_2:-74986666 | Msa1076470:CDS |
| AGTAGCCACAACAGTATATG+CGG | 0.678416 | 7_2:+74984722 | None:intergenic |
| GATTGTTGTAGCGAGTACGT+TGG | 0.683334 | 7_2:-74985241 | Msa1076470:three_prime_UTR |
| ATGCACTTGCAACAATTTCG+GGG | 0.690506 | 7_2:+74986414 | None:intergenic |
| TTGTGATCCTGTGCTGCCAG+AGG | 0.692848 | 7_2:-74985489 | Msa1076470:CDS |
| TTACGGCAACTAGAGAAGAA+GGG | 0.699895 | 7_2:+74987130 | None:intergenic |
| GTGGTGTTGAAGCATGTAAG+GGG | 0.700082 | 7_2:+74986864 | None:intergenic |
| GAAACTTTAGTGGATGTCGG+AGG | 0.715337 | 7_2:-74986509 | Msa1076470:CDS |
| ATCAGGATAGCGTCTCCACG+AGG | 0.727846 | 7_2:+74985706 | None:intergenic |
| TCCACGAGGAACAAACTCAG+TGG | 0.743713 | 7_2:+74985720 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAATTTGTTTTTACAAA+AGG | - | chr7_2:74985790-74985809 | Msa1076470:intron | 10.0% |
| !!! | GGTTATTATTATTATTTTTT+CGG | - | chr7_2:74985828-74985847 | Msa1076470:intron | 10.0% |
| !!! | TTTCAATTTAAATCGATTTT+AGG | + | chr7_2:74984733-74984752 | None:intergenic | 15.0% |
| !!! | AAGTGTTGTTAATTTTTTTA+GGG | - | chr7_2:74985875-74985894 | Msa1076470:intron | 15.0% |
| !! | CTCAAAAAAAAAAAAAAAAG+CGG | + | chr7_2:74986064-74986083 | None:intergenic | 15.0% |
| !!! | GCTTTTTTTTTTTTTTTTGA+GGG | - | chr7_2:74986063-74986082 | Msa1076470:intron | 15.0% |
| !!! | CTTTTTTTTTTTTTTTTGAG+GGG | - | chr7_2:74986064-74986083 | Msa1076470:intron | 15.0% |
| !! | AAAATATTTGCAAGTATATA+TGG | + | chr7_2:74986200-74986219 | None:intergenic | 15.0% |
| !! | AAAACCAAAATAAGATTATA+TGG | + | chr7_2:74986797-74986816 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr7_2:74987024-74987043 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr7_2:74987048-74987067 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr7_2:74987047-74987066 | Msa1076470:CDS | 15.0% |
| !!! | TTGTTTAACAAAGCTTTTAT+TGG | - | chr7_2:74985414-74985433 | Msa1076470:CDS | 20.0% |
| !!! | CGATGTATATATTTTTAGAT+TGG | - | chr7_2:74985644-74985663 | Msa1076470:intron | 20.0% |
| !!! | AAATTTGTTTTTACAAAAGG+TGG | - | chr7_2:74985793-74985812 | Msa1076470:intron | 20.0% |
| !!! | GAAGTGTTGTTAATTTTTTT+AGG | - | chr7_2:74985874-74985893 | Msa1076470:intron | 20.0% |
| !!! | CGCTTTTTTTTTTTTTTTTG+AGG | - | chr7_2:74986062-74986081 | Msa1076470:intron | 20.0% |
| !! | TACACTTATACTTAAAAGTA+GGG | + | chr7_2:74986132-74986151 | None:intergenic | 20.0% |
| !! | ATACACTTATACTTAAAAGT+AGG | + | chr7_2:74986133-74986152 | None:intergenic | 20.0% |
| !! | CATAATCATATTGCATATAT+AGG | - | chr7_2:74986238-74986257 | Msa1076470:intron | 20.0% |
| !!! | ACGTTTTTAATTCAATTAGA+GGG | + | chr7_2:74986344-74986363 | None:intergenic | 20.0% |
| !!! | AACGTTTTTAATTCAATTAG+AGG | + | chr7_2:74986345-74986364 | None:intergenic | 20.0% |
| !!! | TGTTCCATATAATCTTATTT+TGG | - | chr7_2:74986790-74986809 | Msa1076470:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr7_2:74986961-74986980 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr7_2:74987038-74987057 | Msa1076470:CDS | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | + | chr7_2:74987081-74987100 | None:intergenic | 20.0% |
| !! | TTTAAAAAAAATTGAGGTGT+GGG | + | chr7_2:74987190-74987209 | None:intergenic | 20.0% |
| !! | ATTTAAAAAAAATTGAGGTG+TGG | + | chr7_2:74987191-74987210 | None:intergenic | 20.0% |
| ! | AAGAATAACGAAAACTTGTA+TGG | + | chr7_2:74984776-74984795 | None:intergenic | 25.0% |
| ! | TTAAACAACTTCATTTGTTC+TGG | + | chr7_2:74985402-74985421 | None:intergenic | 25.0% |
| !! | AACTTCTCTAAAAAATGGAA+TGG | + | chr7_2:74985445-74985464 | None:intergenic | 25.0% |
| !!! | TCCATTTTTTAGAGAAGTTT+TGG | - | chr7_2:74985446-74985465 | Msa1076470:CDS | 25.0% |
| !! | TCCAAAACTTCTCTAAAAAA+TGG | + | chr7_2:74985450-74985469 | None:intergenic | 25.0% |
| !!! | ACTTTAAAACTAGTATACCT+GGG | + | chr7_2:74985623-74985642 | None:intergenic | 25.0% |
| !!! | TACTTTAAAACTAGTATACC+TGG | + | chr7_2:74985624-74985643 | None:intergenic | 25.0% |
| !! | TAATAATAAAGCCCTCATTT+TGG | + | chr7_2:74985759-74985778 | None:intergenic | 25.0% |
| !!! | TTTTAATTCAATTAGAGGGT+GGG | + | chr7_2:74986340-74986359 | None:intergenic | 25.0% |
| !!! | TTTTTAATTCAATTAGAGGG+TGG | + | chr7_2:74986341-74986360 | None:intergenic | 25.0% |
| ! | AGCAAAACATAGAACTTAAA+AGG | - | chr7_2:74986611-74986630 | Msa1076470:CDS | 25.0% |
| !!! | AAACGACACTTATTTTGAAA+CGG | + | chr7_2:74986893-74986912 | None:intergenic | 25.0% |
| ! | GACGAAACATAAATTAAAGA+TGG | + | chr7_2:74987261-74987280 | None:intergenic | 25.0% |
| !! | TACTGCTATTAATTTGGTTT+CGG | - | chr7_2:74987301-74987320 | Msa1076470:five_prime_UTR | 25.0% |
| AAACTTGTATGGATGTAAGA+AGG | + | chr7_2:74984765-74984784 | None:intergenic | 30.0% | |
| ATTTGAAAATGAGCAAAGCA+AGG | - | chr7_2:74984816-74984835 | Msa1076470:three_prime_UTR | 30.0% | |
| CCTTTGTTGAAAATGGTATT+CGG | + | chr7_2:74984914-74984933 | None:intergenic | 30.0% | |
| ACAACTGATAATTACTAACC+TGG | + | chr7_2:74985165-74985184 | None:intergenic | 30.0% | |
| !!! | AAGTTTTGGAATCATACGAT+GGG | - | chr7_2:74985460-74985479 | Msa1076470:CDS | 30.0% |
| CATTTCTTTGCAGATTACAA+TGG | - | chr7_2:74985527-74985546 | Msa1076470:CDS | 30.0% | |
| TAAATTCCCAAACATTAGCA+AGG | - | chr7_2:74985551-74985570 | Msa1076470:CDS | 30.0% | |
| AAATTCCCAAACATTAGCAA+GGG | - | chr7_2:74985552-74985571 | Msa1076470:CDS | 30.0% | |
| ! | TTATTAGGTTGCCTTATGTT+TGG | - | chr7_2:74986101-74986120 | Msa1076470:intron | 30.0% |
| ! | TATTAGGTTGCCTTATGTTT+GGG | - | chr7_2:74986102-74986121 | Msa1076470:intron | 30.0% |
| CTTATACTTAAAAGTAGGGT+CGG | + | chr7_2:74986128-74986147 | None:intergenic | 30.0% | |
| !! | GATGAATTTTGACCTTTATC+AGG | + | chr7_2:74986318-74986337 | None:intergenic | 30.0% |
| AATTAATATTCCACTTGCAG+TGG | - | chr7_2:74986403-74986422 | Msa1076470:CDS | 30.0% | |
| ! | TGATGCATACATGACATTTT+TGG | - | chr7_2:74986689-74986708 | Msa1076470:CDS | 30.0% |
| ACTTATTCAATCTGAAAGAC+TGG | + | chr7_2:74986732-74986751 | None:intergenic | 30.0% | |
| AGTCTTTCAGATTGAATAAG+TGG | - | chr7_2:74986731-74986750 | Msa1076470:intron | 30.0% | |
| TATTGCATTGGAAACTGAAA+GGG | + | chr7_2:74986949-74986968 | None:intergenic | 30.0% | |
| TTATTGCATTGGAAACTGAA+AGG | + | chr7_2:74986950-74986969 | None:intergenic | 30.0% | |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr7_2:74987130-74987149 | Msa1076470:CDS | 30.0% |
| ! | CGGAACATCTAGTTCAATTA+CGG | + | chr7_2:74984894-74984913 | None:intergenic | 35.0% |
| ! | CCGAATACCATTTTCAACAA+AGG | - | chr7_2:74984911-74984930 | Msa1076470:three_prime_UTR | 35.0% |
| GTTGCTTCCTTTGTTGAAAA+TGG | + | chr7_2:74984921-74984940 | None:intergenic | 35.0% | |
| ACTGATAATTACTAACCTGG+TGG | + | chr7_2:74985162-74985181 | None:intergenic | 35.0% | |
| TTTACGTAAAAGTCATGTGC+TGG | + | chr7_2:74985375-74985394 | None:intergenic | 35.0% | |
| !!! | GAAGTTTTGGAATCATACGA+TGG | - | chr7_2:74985459-74985478 | Msa1076470:CDS | 35.0% |
| TGATTCCCTTGCTAATGTTT+GGG | + | chr7_2:74985560-74985579 | None:intergenic | 35.0% | |
| TTGATTCCCTTGCTAATGTT+TGG | + | chr7_2:74985561-74985580 | None:intergenic | 35.0% | |
| GTACGTGATTGTTAAGTACT+TGG | - | chr7_2:74985686-74985705 | Msa1076470:intron | 35.0% | |
| TAAGTACTTGGCATTTAAGC+AGG | - | chr7_2:74985698-74985717 | Msa1076470:intron | 35.0% | |
| AAGTACTTGGCATTTAAGCA+GGG | - | chr7_2:74985699-74985718 | Msa1076470:intron | 35.0% | |
| !!! | CTCATTTTGGTGTTTGCTTT+GGG | + | chr7_2:74985746-74985765 | None:intergenic | 35.0% |
| CAAAGCAAACACCAAAATGA+GGG | - | chr7_2:74985745-74985764 | Msa1076470:CDS | 35.0% | |
| ! | AAAAGGTGGTAGTGTTGTTA+TGG | - | chr7_2:74985807-74985826 | Msa1076470:intron | 35.0% |
| CATATCGATATCTAGCAGAA+TGG | + | chr7_2:74986023-74986042 | None:intergenic | 35.0% | |
| ! | GTCTAAAGCAAGGGTTTATT+AGG | - | chr7_2:74986086-74986105 | Msa1076470:intron | 35.0% |
| TATATAGGCATAACCCATGT+TGG | - | chr7_2:74986253-74986272 | Msa1076470:intron | 35.0% | |
| AATGTAGTGCAAGTATGATG+AGG | - | chr7_2:74986451-74986470 | Msa1076470:CDS | 35.0% | |
| TTAAAAGGAGTTCAAACAGC+TGG | - | chr7_2:74986626-74986645 | Msa1076470:CDS | 35.0% | |
| TAAAAGGAGTTCAAACAGCT+GGG | - | chr7_2:74986627-74986646 | Msa1076470:CDS | 35.0% | |
| AGCACTTAACTTCGAAAAAC+CGG | + | chr7_2:74986661-74986680 | None:intergenic | 35.0% | |
| !!! | TGACATTTTTGGAGTATCAC+AGG | - | chr7_2:74986700-74986719 | Msa1076470:CDS | 35.0% |
| ATTGAATAAGTGGAGCATGT+TGG | - | chr7_2:74986741-74986760 | Msa1076470:intron | 35.0% | |
| !!! | GACACTTATTTTGAAACGGA+TGG | + | chr7_2:74986889-74986908 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr7_2:74986995-74987014 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr7_2:74986999-74987018 | None:intergenic | 35.0% |
| AGTAATATTTGCTTGAGTGG+TGG | - | chr7_2:74987157-74987176 | Msa1076470:CDS | 35.0% | |
| GTAATATTTGCTTGAGTGGT+GGG | - | chr7_2:74987158-74987177 | Msa1076470:CDS | 35.0% | |
| TAATATTTGCTTGAGTGGTG+GGG | - | chr7_2:74987159-74987178 | Msa1076470:CDS | 35.0% | |
| TGTGGCTACTGCTATTAATT+TGG | - | chr7_2:74987295-74987314 | Msa1076470:five_prime_UTR | 35.0% | |
| AATAATGTGATGTGCAGCAG+TGG | - | chr7_2:74984649-74984668 | Msa1076470:three_prime_UTR | 40.0% | |
| CAGCAGTGGTTGAAAACATT+CGG | - | chr7_2:74984663-74984682 | Msa1076470:three_prime_UTR | 40.0% | |
| AGAAGGGACACTCATTAGAT+GGG | + | chr7_2:74984861-74984880 | None:intergenic | 40.0% | |
| AAGAAGGGACACTCATTAGA+TGG | + | chr7_2:74984862-74984881 | None:intergenic | 40.0% | |
| TTACGGCAACTAGAGAAGAA+GGG | + | chr7_2:74984877-74984896 | None:intergenic | 40.0% | |
| ATTACGGCAACTAGAGAAGA+AGG | + | chr7_2:74984878-74984897 | None:intergenic | 40.0% | |
| GCGAACAATTGCCAAAATCT+CGG | + | chr7_2:74984960-74984979 | None:intergenic | 40.0% | |
| ! | ACGTATGCTCAGGTTGTTAA+CGG | - | chr7_2:74985012-74985031 | Msa1076470:three_prime_UTR | 40.0% |
| AACGGCTTACGATATCTTTG+AGG | - | chr7_2:74985030-74985049 | Msa1076470:three_prime_UTR | 40.0% | |
| !! | TATCTTTGAGGAGCACTTGA+TGG | - | chr7_2:74985042-74985061 | Msa1076470:three_prime_UTR | 40.0% |
| !! | ATCTTTGAGGAGCACTTGAT+GGG | - | chr7_2:74985043-74985062 | Msa1076470:three_prime_UTR | 40.0% |
| TAGAAAGTTCTCACTTGCAG+AGG | - | chr7_2:74985075-74985094 | Msa1076470:three_prime_UTR | 40.0% | |
| TCTCTTGCTGAAGATGAAGA+CGG | - | chr7_2:74985106-74985125 | Msa1076470:three_prime_UTR | 40.0% | |
| TTGCATAGCATGCGTATATG+AGG | - | chr7_2:74985280-74985299 | Msa1076470:three_prime_UTR | 40.0% | |
| TGCATAGCATGCGTATATGA+GGG | - | chr7_2:74985281-74985300 | Msa1076470:three_prime_UTR | 40.0% | |
| ! | GTGGAAACTTTAGTGGATGT+CGG | - | chr7_2:74985492-74985511 | Msa1076470:CDS | 40.0% |
| ATGCACTTGCAACAATTTCG+GGG | + | chr7_2:74985593-74985612 | None:intergenic | 40.0% | |
| GATGCACTTGCAACAATTTC+GGG | + | chr7_2:74985594-74985613 | None:intergenic | 40.0% | |
| GGATGCACTTGCAACAATTT+CGG | + | chr7_2:74985595-74985614 | None:intergenic | 40.0% | |
| AACTAGTATACCTGGGAGTT+GGG | + | chr7_2:74985616-74985635 | None:intergenic | 40.0% | |
| AAACTAGTATACCTGGGAGT+TGG | + | chr7_2:74985617-74985636 | None:intergenic | 40.0% | |
| !!! | CCTCATTTTGGTGTTTGCTT+TGG | + | chr7_2:74985747-74985766 | None:intergenic | 40.0% |
| CCAAAGCAAACACCAAAATG+AGG | - | chr7_2:74985744-74985763 | Msa1076470:CDS | 40.0% | |
| AACGAACATGTGTAAGTCCT+AGG | + | chr7_2:74985972-74985991 | None:intergenic | 40.0% | |
| !! | TTTTTGAGGGGTCTAAAGCA+AGG | - | chr7_2:74986076-74986095 | Msa1076470:intron | 40.0% |
| !! | TTTTGAGGGGTCTAAAGCAA+GGG | - | chr7_2:74986077-74986096 | Msa1076470:intron | 40.0% |
| ATTATAAGTTTGCCATGCGC+CGG | + | chr7_2:74986495-74986514 | None:intergenic | 40.0% | |
| GTCTTCATGATGACCATGTA+CGG | - | chr7_2:74986582-74986601 | Msa1076470:CDS | 40.0% | |
| TCTTCATGATGACCATGTAC+GGG | - | chr7_2:74986583-74986602 | Msa1076470:CDS | 40.0% | |
| !! | TTTTGCTTTTGACCCGTACA+TGG | + | chr7_2:74986598-74986617 | None:intergenic | 40.0% |
| !!! | TTTTGGAGTATCACAGGTAG+CGG | - | chr7_2:74986706-74986725 | Msa1076470:CDS | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr7_2:74986996-74987015 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr7_2:74987134-74987153 | Msa1076470:CDS | 40.0% |
| GGGAGTAATATTTGCTTGAG+TGG | - | chr7_2:74987154-74987173 | Msa1076470:CDS | 40.0% | |
| TTCTACATGCACGTCTCAAA+TGG | - | chr7_2:74987223-74987242 | Msa1076470:five_prime_UTR | 40.0% | |
| TCTACATGCACGTCTCAAAT+GGG | - | chr7_2:74987224-74987243 | Msa1076470:five_prime_UTR | 40.0% | |
| AGTAGCCACAACAGTATATG+CGG | + | chr7_2:74987285-74987304 | None:intergenic | 40.0% | |
| AGGAAGCAACCTTCCTATGT+CGG | - | chr7_2:74984931-74984950 | Msa1076470:three_prime_UTR | 45.0% | |
| AAAATCTCGGAAGCCGACAT+AGG | + | chr7_2:74984947-74984966 | None:intergenic | 45.0% | |
| !!! | TATGTCGGCTTCCGAGATTT+TGG | - | chr7_2:74984946-74984965 | Msa1076470:three_prime_UTR | 45.0% |
| TTGGCAATTGTTCGCCCAAA+CGG | - | chr7_2:74984965-74984984 | Msa1076470:three_prime_UTR | 45.0% | |
| ATAACCTGGAACGTATGCTC+AGG | - | chr7_2:74985002-74985021 | Msa1076470:three_prime_UTR | 45.0% | |
| AAAGTTCTCACTTGCAGAGG+TGG | - | chr7_2:74985078-74985097 | Msa1076470:three_prime_UTR | 45.0% | |
| AAGTTCTCACTTGCAGAGGT+GGG | - | chr7_2:74985079-74985098 | Msa1076470:three_prime_UTR | 45.0% | |
| ! | GTGGTGTTGAAGCATGTAAG+GGG | + | chr7_2:74985143-74985162 | None:intergenic | 45.0% |
| ! | GGTGGTGTTGAAGCATGTAA+GGG | + | chr7_2:74985144-74985163 | None:intergenic | 45.0% |
| ! | TGGTGGTGTTGAAGCATGTA+AGG | + | chr7_2:74985145-74985164 | None:intergenic | 45.0% |
| TTACATGCTTCAACACCACC+AGG | - | chr7_2:74985144-74985163 | Msa1076470:three_prime_UTR | 45.0% | |
| AACCATTCCGGAAGGTGAAT+GGG | - | chr7_2:74985346-74985365 | Msa1076470:three_prime_UTR | 45.0% | |
| ! | GAATCATACGATGGGTTTCG+TGG | - | chr7_2:74985468-74985487 | Msa1076470:CDS | 45.0% |
| TCGTGGTGTGGAAACTTTAG+TGG | - | chr7_2:74985485-74985504 | Msa1076470:CDS | 45.0% | |
| ! | GAAACTTTAGTGGATGTCGG+AGG | - | chr7_2:74985495-74985514 | Msa1076470:CDS | 45.0% |
| ACTTGGCATTTAAGCAGGGT+CGG | - | chr7_2:74985703-74985722 | Msa1076470:CDS | 45.0% | |
| GGTCGGCACAATAAATTGTG+AGG | - | chr7_2:74985720-74985739 | Msa1076470:CDS | 45.0% | |
| ! | CTAGGTTGAAGACACTGTGA+AGG | + | chr7_2:74985954-74985973 | None:intergenic | 45.0% |
| CTTCACAGTGTCTTCAACCT+AGG | - | chr7_2:74985952-74985971 | Msa1076470:intron | 45.0% | |
| ATAGGCATAACCCATGTTGG+TGG | - | chr7_2:74986256-74986275 | Msa1076470:intron | 45.0% | |
| TGGAGACGCTATCCTGATAA+AGG | - | chr7_2:74986303-74986322 | Msa1076470:intron | 45.0% | |
| CACTTGCAGTGGTTGTGTTT+GGG | - | chr7_2:74986414-74986433 | Msa1076470:CDS | 45.0% | |
| ACCAGGTCAAAGGCTTTACT+AGG | - | chr7_2:74986552-74986571 | Msa1076470:CDS | 45.0% | |
| ACCTAGTAAAGCCTTTGACC+TGG | + | chr7_2:74986556-74986575 | None:intergenic | 45.0% | |
| AGGTCAAAGGCTTTACTAGG+TGG | - | chr7_2:74986555-74986574 | Msa1076470:CDS | 45.0% | |
| GGTCAAAGGCTTTACTAGGT+GGG | - | chr7_2:74986556-74986575 | Msa1076470:CDS | 45.0% | |
| GATTGTTGTAGCGAGTACGT+TGG | - | chr7_2:74986763-74986782 | Msa1076470:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr7_2:74987133-74987152 | Msa1076470:CDS | 45.0% |
| !! | TAATAATTTAAAAAAAATTG+AGG | + | chr7_2:74987196-74987215 | None:intergenic | 5.0% |
| ACAACCTGAGCATACGTTCC+AGG | + | chr7_2:74985009-74985028 | None:intergenic | 50.0% | |
| !! | GAGGAGCACTTGATGGGTAA+TGG | - | chr7_2:74985049-74985068 | Msa1076470:three_prime_UTR | 50.0% |
| AGCATGCGTATATGAGGGTC+TGG | - | chr7_2:74985286-74985305 | Msa1076470:three_prime_UTR | 50.0% | |
| TCAACCACGTCCTTAAGGAG+AGG | + | chr7_2:74985312-74985331 | None:intergenic | 50.0% | |
| TCTCCTTAAGGACGTGGTTG+AGG | - | chr7_2:74985311-74985330 | Msa1076470:three_prime_UTR | 50.0% | |
| ACCCATCCACAGAACCATTC+CGG | - | chr7_2:74985334-74985353 | Msa1076470:three_prime_UTR | 50.0% | |
| ! | TCCGGAATGGTTCTGTGGAT+GGG | + | chr7_2:74985338-74985357 | None:intergenic | 50.0% |
| ! | TTCCGGAATGGTTCTGTGGA+TGG | + | chr7_2:74985339-74985358 | None:intergenic | 50.0% |
| ATCCACAGAACCATTCCGGA+AGG | - | chr7_2:74985338-74985357 | Msa1076470:three_prime_UTR | 50.0% | |
| GAACCATTCCGGAAGGTGAA+TGG | - | chr7_2:74985345-74985364 | Msa1076470:three_prime_UTR | 50.0% | |
| ACCATTCCGGAAGGTGAATG+GGG | - | chr7_2:74985347-74985366 | Msa1076470:three_prime_UTR | 50.0% | |
| ! | ATACGATGGGTTTCGTGGTG+TGG | - | chr7_2:74985473-74985492 | Msa1076470:CDS | 50.0% |
| AGTGGCATCACCACCAACAT+GGG | + | chr7_2:74986269-74986288 | None:intergenic | 50.0% | |
| TCCACGAGGAACAAACTCAG+TGG | + | chr7_2:74986287-74986306 | None:intergenic | 50.0% | |
| CCAAACACAACCACTGCAAG+TGG | + | chr7_2:74986416-74986435 | None:intergenic | 50.0% | |
| CCACTTGCAGTGGTTGTGTT+TGG | - | chr7_2:74986413-74986432 | Msa1076470:CDS | 50.0% | |
| GAATTGCCATCGCACTCTTC+CGG | - | chr7_2:74986473-74986492 | Msa1076470:CDS | 50.0% | |
| !! | GGACGAAAGTACCAGGTCAA+AGG | - | chr7_2:74986542-74986561 | Msa1076470:CDS | 50.0% |
| TCTCGGAAGCCGACATAGGA+AGG | + | chr7_2:74984943-74984962 | None:intergenic | 55.0% | |
| GCAATTGTTCGCCCAAACGG+AGG | - | chr7_2:74984968-74984987 | Msa1076470:three_prime_UTR | 55.0% | |
| ATTGTTCGCCCAAACGGAGG+AGG | - | chr7_2:74984971-74984990 | Msa1076470:three_prime_UTR | 55.0% | |
| TTGTTCGCCCAAACGGAGGA+GGG | - | chr7_2:74984972-74984991 | Msa1076470:three_prime_UTR | 55.0% | |
| AGGAGGGGAAGCAGATAACC+TGG | - | chr7_2:74984988-74985007 | Msa1076470:three_prime_UTR | 55.0% | |
| GGTCCTCAACCACGTCCTTA+AGG | + | chr7_2:74985317-74985336 | None:intergenic | 55.0% | |
| ! | CACCTTCCGGAATGGTTCTG+TGG | + | chr7_2:74985343-74985362 | None:intergenic | 55.0% |
| TCCCCATTCACCTTCCGGAA+TGG | + | chr7_2:74985351-74985370 | None:intergenic | 55.0% | |
| CTGGTTCCCCATTCACCTTC+CGG | + | chr7_2:74985356-74985375 | None:intergenic | 55.0% | |
| GTAGGGTCGGCCCAAACATA+AGG | + | chr7_2:74986115-74986134 | None:intergenic | 55.0% | |
| CAGTGGCATCACCACCAACA+TGG | + | chr7_2:74986270-74986289 | None:intergenic | 55.0% | |
| ! | GCCACTGAGTTTGTTCCTCG+TGG | - | chr7_2:74986283-74986302 | Msa1076470:intron | 55.0% |
| ATCAGGATAGCGTCTCCACG+AGG | + | chr7_2:74986301-74986320 | None:intergenic | 55.0% | |
| TTGTGATCCTGTGCTGCCAG+AGG | - | chr7_2:74986515-74986534 | Msa1076470:CDS | 55.0% | |
| GTACTTTCGTCCGTCACCTC+TGG | + | chr7_2:74986534-74986553 | None:intergenic | 55.0% | |
| !! | AGGTGACGGACGAAAGTACC+AGG | - | chr7_2:74986535-74986554 | Msa1076470:CDS | 55.0% |
| GGAGTTCAAACAGCTGGGTG+TGG | - | chr7_2:74986632-74986651 | Msa1076470:CDS | 55.0% | |
| CGTCGCCGCATATACTGTTG+TGG | - | chr7_2:74987277-74987296 | Msa1076470:five_prime_UTR | 55.0% | |
| TGTTCGCCCAAACGGAGGAG+GGG | - | chr7_2:74984973-74984992 | Msa1076470:three_prime_UTR | 60.0% | |
| CTGCTTCCCCTCCTCCGTTT+GGG | + | chr7_2:74984982-74985001 | None:intergenic | 60.0% | |
| TCTGCTTCCCCTCCTCCGTT+TGG | + | chr7_2:74984983-74985002 | None:intergenic | 60.0% | |
| GAGGGTCTGGCCTCTCCTTA+AGG | - | chr7_2:74985299-74985318 | Msa1076470:three_prime_UTR | 60.0% | |
| CTGGCCTCTCCTTAAGGACG+TGG | - | chr7_2:74985305-74985324 | Msa1076470:three_prime_UTR | 60.0% | |
| GTGGATGTCGGAGGCAGTAC+AGG | - | chr7_2:74985504-74985523 | Msa1076470:CDS | 60.0% | |
| GCAAGTGCATCCCAACTCCC+AGG | - | chr7_2:74985603-74985622 | Msa1076470:intron | 60.0% | |
| TCCTGTGCTGCCAGAGGTGA+CGG | - | chr7_2:74986521-74986540 | Msa1076470:CDS | 60.0% | |
| AAACAGCTGGGTGTGGCTGC+CGG | - | chr7_2:74986639-74986658 | Msa1076470:CDS | 60.0% | |
| ! | CATGCGCCGGAAGAGTGCGA+TGG | + | chr7_2:74986482-74986501 | None:intergenic | 65.0% |
| CATCGCACTCTTCCGGCGCA+TGG | - | chr7_2:74986480-74986499 | Msa1076470:CDS | 65.0% | |
| TCCGTCACCTCTGGCAGCAC+AGG | + | chr7_2:74986525-74986544 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 74984648 | 74987378 | 74984648 | ID=Msa1076470;Name=Msa1076470 |
| chr7_2 | mRNA | 74984648 | 74987378 | 74984648 | ID=Msa1076470-mRNA-1;Parent=Msa1076470;Name=Msa1076470-mRNA-1;_AED=0.37;_eAED=0.37;_QI=176|0.66|0.75|1|1|1|4|749|316 |
| chr7_2 | exon | 74984648 | 74985603 | 74984648 | ID=Msa1076470-mRNA-1:exon:17793;Parent=Msa1076470-mRNA-1 |
| chr7_2 | exon | 74985702 | 74985766 | 74985702 | ID=Msa1076470-mRNA-1:exon:17792;Parent=Msa1076470-mRNA-1 |
| chr7_2 | exon | 74986402 | 74986738 | 74986402 | ID=Msa1076470-mRNA-1:exon:17791;Parent=Msa1076470-mRNA-1 |
| chr7_2 | exon | 74986861 | 74987378 | 74986861 | ID=Msa1076470-mRNA-1:exon:17790;Parent=Msa1076470-mRNA-1 |
| chr7_2 | five_prime_UTR | 74987203 | 74987378 | 74987203 | ID=Msa1076470-mRNA-1:five_prime_utr;Parent=Msa1076470-mRNA-1 |
| chr7_2 | CDS | 74986861 | 74987202 | 74986861 | ID=Msa1076470-mRNA-1:cds;Parent=Msa1076470-mRNA-1 |
| chr7_2 | CDS | 74986402 | 74986738 | 74986402 | ID=Msa1076470-mRNA-1:cds;Parent=Msa1076470-mRNA-1 |
| chr7_2 | CDS | 74985702 | 74985766 | 74985702 | ID=Msa1076470-mRNA-1:cds;Parent=Msa1076470-mRNA-1 |
| chr7_2 | CDS | 74985397 | 74985603 | 74985397 | ID=Msa1076470-mRNA-1:cds;Parent=Msa1076470-mRNA-1 |
| chr7_2 | three_prime_UTR | 74984648 | 74985396 | 74984648 | ID=Msa1076470-mRNA-1:three_prime_utr;Parent=Msa1076470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
