Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041290 | KEH24421.1 | 85.000 | 220 | 11 | 1 | 1 | 198 | 1 | 220 | 2.83e-122 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041290 | sp|O22261|NDT1_ARATH | 71.359 | 206 | 37 | 1 | 9 | 192 | 102 | 307 | 2.49e-96 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041290 | A0A072U4Z7 | 85.000 | 220 | 11 | 1 | 1 | 198 | 1 | 220 | 1.35e-122 | 355 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0615710 | Msa1041290 | -0.800857 | 1.183671e-48 | -8.615850e-47 |
| Msa0745700 | Msa1041290 | 0.841784 | 3.850327e-58 | -8.615850e-47 |
| Msa0751570 | Msa1041290 | -0.804342 | 2.261654e-49 | -8.615850e-47 |
| Msa0765910 | Msa1041290 | -0.801694 | 7.977650e-49 | -8.615850e-47 |
| Msa1041290 | Msa1073410 | -0.816808 | 4.568378e-52 | -8.615850e-47 |
| Msa1041290 | Msa1196450 | -0.813586 | 2.374526e-51 | -8.615850e-47 |
| Msa1041290 | Msa1362150 | 0.831177 | 1.934749e-55 | -8.615850e-47 |
| Msa0255090 | Msa1041290 | -0.813733 | 2.204128e-51 | -8.615850e-47 |
| Msa0259380 | Msa1041290 | -0.810873 | 9.282151e-51 | -8.615850e-47 |
| Msa0945110 | Msa1041290 | -0.812381 | 4.362347e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041290 | MtrunA17_Chr7g0269701 | 85.000 | 220 | 11 | 1 | 1 | 198 | 100 | 319 | 4.71e-125 | 355 |
| Msa1041290 | MtrunA17_Chr7g0269701 | 27.895 | 190 | 112 | 4 | 23 | 188 | 21 | 209 | 5.51e-12 | 63.5 |
| Msa1041290 | MtrunA17_Chr1g0195101 | 79.024 | 205 | 21 | 1 | 12 | 194 | 108 | 312 | 1.59e-105 | 305 |
| Msa1041290 | MtrunA17_Chr5g0423111 | 61.667 | 180 | 44 | 2 | 38 | 192 | 133 | 312 | 3.19e-73 | 225 |
| Msa1041290 | MtrunA17_Chr8g0372531 | 35.545 | 211 | 105 | 3 | 6 | 185 | 95 | 305 | 1.55e-32 | 119 |
| Msa1041290 | MtrunA17_Chr8g0372531 | 28.655 | 171 | 99 | 4 | 39 | 187 | 29 | 198 | 7.82e-13 | 65.9 |
| Msa1041290 | MtrunA17_Chr8g0385571 | 32.812 | 192 | 101 | 4 | 18 | 185 | 315 | 502 | 2.59e-22 | 93.6 |
| Msa1041290 | MtrunA17_Chr3g0131501 | 32.973 | 185 | 94 | 5 | 25 | 185 | 302 | 480 | 9.61e-22 | 92.0 |
| Msa1041290 | MtrunA17_Chr3g0137941 | 30.542 | 203 | 115 | 4 | 7 | 188 | 199 | 396 | 1.97e-21 | 90.5 |
| Msa1041290 | MtrunA17_Chr7g0252401 | 34.239 | 184 | 92 | 5 | 24 | 185 | 303 | 479 | 2.78e-21 | 90.5 |
| Msa1041290 | MtrunA17_Chr4g0063561 | 31.683 | 202 | 111 | 5 | 8 | 188 | 202 | 397 | 1.13e-20 | 88.6 |
| Msa1041290 | MtrunA17_Chr1g0149111 | 29.851 | 201 | 115 | 4 | 7 | 186 | 216 | 411 | 2.52e-20 | 87.4 |
| Msa1041290 | MtrunA17_Chr1g0163521 | 28.372 | 215 | 90 | 5 | 24 | 175 | 132 | 345 | 1.86e-19 | 84.7 |
| Msa1041290 | MtrunA17_Chr5g0436571 | 28.395 | 243 | 125 | 8 | 5 | 198 | 94 | 336 | 3.03e-19 | 84.0 |
| Msa1041290 | MtrunA17_Chr8g0366791 | 29.082 | 196 | 110 | 5 | 18 | 185 | 103 | 297 | 3.54e-17 | 77.8 |
| Msa1041290 | MtrunA17_Chr3g0135801 | 25.543 | 184 | 116 | 2 | 22 | 185 | 139 | 321 | 5.19e-16 | 74.7 |
| Msa1041290 | MtrunA17_Chr1g0201361 | 27.317 | 205 | 119 | 5 | 9 | 192 | 117 | 312 | 5.64e-16 | 74.7 |
| Msa1041290 | MtrunA17_Chr4g0028531 | 28.141 | 199 | 117 | 6 | 3 | 175 | 95 | 293 | 5.70e-16 | 74.7 |
| Msa1041290 | MtrunA17_Chr4g0046981 | 32.203 | 177 | 95 | 4 | 30 | 181 | 18 | 194 | 8.03e-16 | 73.9 |
| Msa1041290 | MtrunA17_Chr5g0411411 | 26.020 | 196 | 116 | 5 | 18 | 185 | 103 | 297 | 1.52e-15 | 73.2 |
| Msa1041290 | MtrunA17_Chr8g0383321 | 28.061 | 196 | 112 | 4 | 16 | 191 | 125 | 311 | 1.95e-15 | 73.2 |
| Msa1041290 | MtrunA17_Chr6g0463351 | 28.655 | 171 | 95 | 5 | 40 | 192 | 83 | 244 | 2.48e-15 | 73.2 |
| Msa1041290 | MtrunA17_Chr4g0008061 | 27.179 | 195 | 113 | 5 | 13 | 184 | 108 | 296 | 3.42e-15 | 72.4 |
| Msa1041290 | MtrunA17_Chr4g0008061 | 26.500 | 200 | 118 | 4 | 13 | 183 | 4 | 203 | 1.80e-11 | 62.0 |
| Msa1041290 | MtrunA17_Chr7g0241521 | 27.919 | 197 | 113 | 5 | 12 | 185 | 109 | 299 | 2.14e-14 | 70.1 |
| Msa1041290 | MtrunA17_Chr8g0347451 | 25.116 | 215 | 115 | 4 | 13 | 185 | 143 | 353 | 2.49e-14 | 70.5 |
| Msa1041290 | MtrunA17_Chr2g0296061 | 27.442 | 215 | 114 | 7 | 12 | 187 | 115 | 326 | 3.06e-14 | 69.7 |
| Msa1041290 | MtrunA17_Chr5g0396801 | 27.830 | 212 | 111 | 7 | 13 | 185 | 130 | 338 | 3.12e-14 | 70.1 |
| Msa1041290 | MtrunA17_Chr4g0006851 | 29.744 | 195 | 107 | 7 | 10 | 185 | 175 | 358 | 6.73e-14 | 69.3 |
| Msa1041290 | MtrunA17_Chr6g0455381 | 28.646 | 192 | 108 | 5 | 27 | 192 | 20 | 208 | 7.95e-14 | 68.6 |
| Msa1041290 | MtrunA17_Chr7g0240341 | 28.079 | 203 | 113 | 6 | 14 | 188 | 120 | 317 | 1.07e-13 | 68.2 |
| Msa1041290 | MtrunA17_Chr3g0135861 | 25.000 | 200 | 113 | 7 | 23 | 185 | 130 | 329 | 1.41e-13 | 68.2 |
| Msa1041290 | MtrunA17_Chr7g0219891 | 26.540 | 211 | 120 | 6 | 9 | 189 | 4 | 209 | 4.62e-13 | 66.2 |
| Msa1041290 | MtrunA17_Chr7g0242311 | 29.843 | 191 | 104 | 7 | 14 | 185 | 177 | 356 | 7.46e-13 | 66.2 |
| Msa1041290 | MtrunA17_Chr1g0196161 | 29.545 | 176 | 99 | 4 | 30 | 184 | 3 | 174 | 2.28e-12 | 62.8 |
| Msa1041290 | MtrunA17_Chr1g0196921 | 25.000 | 180 | 110 | 5 | 30 | 184 | 117 | 296 | 4.77e-12 | 63.5 |
| Msa1041290 | MtrunA17_Chr3g0103681 | 25.571 | 219 | 127 | 6 | 14 | 198 | 5 | 221 | 9.42e-12 | 62.8 |
| Msa1041290 | MtrunA17_Chr3g0103681 | 28.571 | 168 | 91 | 5 | 39 | 183 | 135 | 296 | 1.27e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041290 | AT2G47490.1 | 71.359 | 206 | 37 | 1 | 9 | 192 | 102 | 307 | 2.53e-97 | 285 |
| Msa1041290 | AT1G25380.1 | 56.311 | 206 | 66 | 2 | 11 | 192 | 108 | 313 | 1.20e-72 | 224 |
| Msa1041290 | AT1G25380.2 | 56.311 | 206 | 66 | 2 | 11 | 192 | 108 | 313 | 1.20e-72 | 224 |
| Msa1041290 | AT5G66380.1 | 35.784 | 204 | 102 | 2 | 14 | 188 | 100 | 303 | 2.04e-32 | 119 |
| Msa1041290 | AT5G46800.2 | 29.146 | 199 | 109 | 3 | 18 | 185 | 102 | 299 | 4.98e-20 | 85.9 |
| Msa1041290 | AT5G46800.2 | 26.020 | 196 | 112 | 6 | 23 | 185 | 7 | 202 | 1.05e-11 | 62.8 |
| Msa1041290 | AT5G46800.3 | 29.146 | 199 | 109 | 3 | 18 | 185 | 102 | 299 | 4.98e-20 | 85.9 |
| Msa1041290 | AT5G46800.3 | 26.020 | 196 | 112 | 6 | 23 | 185 | 7 | 202 | 1.05e-11 | 62.8 |
| Msa1041290 | AT5G46800.1 | 29.146 | 199 | 109 | 3 | 18 | 185 | 102 | 299 | 4.98e-20 | 85.9 |
| Msa1041290 | AT5G46800.1 | 26.020 | 196 | 112 | 6 | 23 | 185 | 7 | 202 | 1.05e-11 | 62.8 |
| Msa1041290 | AT4G32400.1 | 29.082 | 196 | 113 | 4 | 14 | 188 | 198 | 388 | 2.80e-19 | 84.7 |
| Msa1041290 | AT4G39460.2 | 30.198 | 202 | 112 | 4 | 10 | 191 | 125 | 317 | 1.59e-18 | 82.0 |
| Msa1041290 | AT4G39460.1 | 30.198 | 202 | 112 | 4 | 10 | 191 | 125 | 317 | 1.59e-18 | 82.0 |
| Msa1041290 | AT4G39460.3 | 30.198 | 202 | 112 | 4 | 10 | 191 | 125 | 317 | 1.59e-18 | 82.0 |
| Msa1041290 | AT2G39970.1 | 31.019 | 216 | 96 | 10 | 19 | 186 | 108 | 318 | 2.49e-18 | 81.6 |
| Msa1041290 | AT4G03115.5 | 33.702 | 181 | 92 | 6 | 23 | 182 | 62 | 235 | 4.22e-16 | 74.3 |
| Msa1041290 | AT4G03115.6 | 33.702 | 181 | 92 | 6 | 23 | 182 | 70 | 243 | 4.86e-16 | 74.3 |
| Msa1041290 | AT4G03115.1 | 34.270 | 178 | 89 | 6 | 23 | 179 | 133 | 303 | 7.12e-16 | 74.7 |
| Msa1041290 | AT4G03115.3 | 31.667 | 180 | 95 | 5 | 23 | 181 | 165 | 337 | 7.35e-16 | 75.1 |
| Msa1041290 | AT1G79900.1 | 30.526 | 190 | 97 | 6 | 31 | 198 | 117 | 293 | 8.35e-16 | 74.3 |
| Msa1041290 | AT3G53940.1 | 31.522 | 184 | 89 | 5 | 30 | 185 | 186 | 360 | 1.14e-15 | 74.7 |
| Msa1041290 | AT5G51050.1 | 30.000 | 200 | 106 | 6 | 11 | 185 | 305 | 495 | 2.51e-15 | 73.9 |
| Msa1041290 | AT3G54110.1 | 26.923 | 208 | 124 | 5 | 1 | 185 | 95 | 297 | 3.66e-15 | 72.8 |
| Msa1041290 | AT2G37890.1 | 29.851 | 201 | 114 | 7 | 9 | 187 | 139 | 334 | 8.16e-15 | 72.0 |
| Msa1041290 | AT5G01340.1 | 28.500 | 200 | 116 | 6 | 3 | 175 | 90 | 289 | 9.00e-15 | 71.6 |
| Msa1041290 | AT4G26180.1 | 27.225 | 191 | 108 | 5 | 23 | 182 | 116 | 306 | 2.04e-14 | 70.9 |
| Msa1041290 | AT3G51870.1 | 29.293 | 198 | 110 | 6 | 9 | 187 | 176 | 362 | 2.32e-14 | 70.9 |
| Msa1041290 | AT5G58970.1 | 27.461 | 193 | 111 | 5 | 23 | 192 | 119 | 305 | 6.98e-14 | 68.9 |
| Msa1041290 | AT5G56450.1 | 25.510 | 196 | 119 | 5 | 14 | 185 | 133 | 325 | 9.56e-14 | 68.9 |
| Msa1041290 | AT3G20240.1 | 30.270 | 185 | 98 | 4 | 26 | 187 | 165 | 341 | 1.80e-13 | 68.2 |
| Msa1041290 | AT3G55640.1 | 29.293 | 198 | 111 | 7 | 14 | 185 | 131 | 325 | 1.99e-13 | 67.8 |
| Msa1041290 | AT3G55640.4 | 29.293 | 198 | 111 | 7 | 14 | 185 | 131 | 325 | 1.99e-13 | 67.8 |
| Msa1041290 | AT5G07320.1 | 28.646 | 192 | 108 | 5 | 14 | 183 | 290 | 474 | 5.62e-13 | 67.0 |
| Msa1041290 | AT1G34065.1 | 27.551 | 196 | 113 | 4 | 10 | 185 | 149 | 335 | 5.75e-13 | 66.6 |
| Msa1041290 | AT1G34065.2 | 27.551 | 196 | 113 | 4 | 10 | 185 | 142 | 328 | 6.03e-13 | 66.6 |
| Msa1041290 | AT1G14140.1 | 24.737 | 190 | 118 | 5 | 13 | 179 | 107 | 294 | 8.59e-13 | 65.9 |
| Msa1041290 | AT5G01500.1 | 25.490 | 204 | 108 | 5 | 10 | 187 | 205 | 390 | 1.23e-12 | 65.9 |
| Msa1041290 | AT1G74240.1 | 28.037 | 214 | 107 | 7 | 13 | 181 | 121 | 332 | 5.72e-12 | 63.9 |
| Msa1041290 | AT1G74240.2 | 28.037 | 214 | 107 | 7 | 13 | 181 | 73 | 284 | 6.12e-12 | 63.5 |
| Msa1041290 | AT2G33820.4 | 28.571 | 182 | 95 | 5 | 30 | 181 | 24 | 200 | 1.92e-11 | 62.0 |
| Msa1041290 | AT2G33820.1 | 28.571 | 182 | 95 | 5 | 30 | 181 | 24 | 200 | 2.01e-11 | 62.0 |
Find 52 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCAGTTGGATCTAATA+TGG | 0.294163 | 7_1:-78891375 | Msa1041290:CDS |
| ATGGCAGCTGCTGCTGGTGC+TGG | 0.314106 | 7_1:-78891356 | Msa1041290:CDS |
| ATGCCCTTGTTCTTGCAATC+TGG | 0.329264 | 7_1:+78889764 | None:intergenic |
| TCTAATATGGCAGCTGCTGC+TGG | 0.364936 | 7_1:-78891362 | Msa1041290:CDS |
| GCAGATAGTGTGCTCCTATA+TGG | 0.372763 | 7_1:+78890566 | None:intergenic |
| CCTTGTTTACAAATCCACTT+TGG | 0.378370 | 7_1:-78891322 | Msa1041290:CDS |
| TGCAAGCGAGGAGGGCATAC+GGG | 0.381970 | 7_1:-78890531 | Msa1041290:CDS |
| CTTGTTTACAAATCCACTTT+GGG | 0.386132 | 7_1:-78891321 | Msa1041290:CDS |
| AAAGCTGGTGAATGTGATTA+CGG | 0.422615 | 7_1:+78889623 | None:intergenic |
| CAGCTGGTGTTGTCCTCAAA+AGG | 0.461911 | 7_1:+78889646 | None:intergenic |
| CAACACCAGATCTCATTCCC+TGG | 0.474920 | 7_1:+78890591 | None:intergenic |
| CAATTATATCACAAAATATG+AGG | 0.475193 | 7_1:+78889552 | None:intergenic |
| TTGCAAGCGAGGAGGGCATA+CGG | 0.475495 | 7_1:-78890532 | Msa1041290:CDS |
| GGTCTTGTACCTGCCCTAGC+TGG | 0.481211 | 7_1:-78890389 | Msa1041290:intron |
| TTTCAACAAGAAGGTGTACC+TGG | 0.482745 | 7_1:-78889693 | Msa1041290:CDS |
| CAGACCCAGGGAATGAGATC+TGG | 0.500483 | 7_1:-78890596 | Msa1041290:CDS |
| TATGATTGACTGTATAAGAA+AGG | 0.502517 | 7_1:-78889718 | Msa1041290:CDS |
| GATCTGGTGTTGTGCCATAT+AGG | 0.511351 | 7_1:-78890580 | Msa1041290:CDS |
| GCAAGCGAGGAGGGCATACG+GGG | 0.514605 | 7_1:-78890530 | Msa1041290:CDS |
| TGCGAGTTTGTCATTCATGA+AGG | 0.519040 | 7_1:-78893234 | Msa1041290:CDS |
| GAAAGCCATCACCTTTCAGT+TGG | 0.522221 | 7_1:-78891386 | Msa1041290:CDS |
| TATCACAAAATATGAGGATG+TGG | 0.528275 | 7_1:+78889558 | None:intergenic |
| CGTTCCAGATTGCAAGAACA+AGG | 0.528375 | 7_1:-78889768 | Msa1041290:CDS |
| ACGGTGTATCATTTCAAAGC+TGG | 0.529742 | 7_1:+78889608 | None:intergenic |
| GAAAATGTGAAACAAGAAAA+CGG | 0.532643 | 7_1:+78889589 | None:intergenic |
| ATATGAGGATGTGGATCAGA+AGG | 0.544998 | 7_1:+78889567 | None:intergenic |
| AGGAGAATTGCAAGCGAGGA+GGG | 0.545651 | 7_1:-78890539 | Msa1041290:CDS |
| CAACATGACTGATACCAGCT+AGG | 0.545868 | 7_1:+78890375 | None:intergenic |
| AAAGGTTGGTGGCACATCCT+CGG | 0.553964 | 7_1:+78889664 | None:intergenic |
| CACTCTGAGAAACGATACTC+TGG | 0.562098 | 7_1:-78889741 | Msa1041290:CDS |
| AACACCAGATCTCATTCCCT+GGG | 0.570429 | 7_1:+78890592 | None:intergenic |
| GCACATCCTCGGTAAAAGCC+AGG | 0.574189 | 7_1:+78889675 | None:intergenic |
| CTAGTCTTGACAACCCAAAG+TGG | 0.580782 | 7_1:+78891308 | None:intergenic |
| TAGATCCAACTGAAAGGTGA+TGG | 0.581055 | 7_1:+78891381 | None:intergenic |
| GACGCAGCAGTCGATAAACT+TGG | 0.583043 | 7_1:-78890221 | Msa1041290:CDS |
| GTGAATGTGATTACGGCAGC+TGG | 0.583359 | 7_1:+78889630 | None:intergenic |
| TATTCAGCAACATACCTCAT+GGG | 0.586335 | 7_1:+78890136 | None:intergenic |
| TGTTGTCCTCAAAAGGTTGG+TGG | 0.586997 | 7_1:+78889653 | None:intergenic |
| CCAAAGTGGATTTGTAAACA+AGG | 0.597733 | 7_1:+78891322 | None:intergenic |
| GCGAGTTTGTCATTCATGAA+GGG | 0.606538 | 7_1:-78893233 | Msa1041290:intron |
| AACATGACTGATACCAGCTA+GGG | 0.614342 | 7_1:+78890376 | None:intergenic |
| TGGTGTTGTCCTCAAAAGGT+TGG | 0.624240 | 7_1:+78889650 | None:intergenic |
| TGACTGATACCAGCTAGGGC+AGG | 0.625064 | 7_1:+78890380 | None:intergenic |
| CAAGCGAGGAGGGCATACGG+GGG | 0.639149 | 7_1:-78890529 | Msa1041290:CDS |
| CCATATTAGATCCAACTGAA+AGG | 0.640622 | 7_1:+78891375 | None:intergenic |
| GAGGAGAATTGCAAGCGAGG+AGG | 0.644702 | 7_1:-78890540 | Msa1041290:CDS |
| GGAGCACACTATCTGCATTG+AGG | 0.645780 | 7_1:-78890559 | Msa1041290:CDS |
| ATTCAGCAACATACCTCATG+GGG | 0.661905 | 7_1:+78890137 | None:intergenic |
| ATTGAGGAGAATTGCAAGCG+AGG | 0.663439 | 7_1:-78890543 | Msa1041290:CDS |
| CACATTGACATATCCCCATG+AGG | 0.697361 | 7_1:-78890150 | Msa1041290:intron |
| GTTCCAGATTGCAAGAACAA+GGG | 0.717361 | 7_1:-78889767 | Msa1041290:CDS |
| CTCATGGGGATATGTCAATG+TGG | 0.720270 | 7_1:+78890151 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCTTTCATAATATTTAA+AGG | - | chr7_1:78890525-78890544 | Msa1041290:CDS | 10.0% |
| !! | AATCTTTCATAATATTTAAA+GGG | - | chr7_1:78890526-78890545 | Msa1041290:CDS | 10.0% |
| !!! | TATTTTAATTATTTTTGTCT+AGG | - | chr7_1:78890789-78890808 | Msa1041290:intron | 10.0% |
| !! | AAATAATATTAATATATCGA+TGG | - | chr7_1:78890913-78890932 | Msa1041290:intron | 10.0% |
| !! | TAATAATAAATAATGTCATA+TGG | + | chr7_1:78892058-78892077 | None:intergenic | 10.0% |
| !! | ATATGACATTATTTATTATT+AGG | - | chr7_1:78892057-78892076 | Msa1041290:intron | 10.0% |
| !!! | GATTTTTAATTTTTATTTGC+TGG | - | chr7_1:78889859-78889878 | Msa1041290:intron | 15.0% |
| !! | TCAAAATAAATATAAACCAT+TGG | + | chr7_1:78890169-78890188 | None:intergenic | 15.0% |
| !!! | TTTGTACATTGATTTAAATA+TGG | + | chr7_1:78890735-78890754 | None:intergenic | 15.0% |
| !!! | TTGAATTTTACTAAGAATAT+AGG | + | chr7_1:78891623-78891642 | None:intergenic | 15.0% |
| !! | AGATCATATTATCTATTATT+CGG | - | chr7_1:78891841-78891860 | Msa1041290:intron | 15.0% |
| !! | AATAATTAACACTTTAATGA+CGG | - | chr7_1:78892370-78892389 | Msa1041290:intron | 15.0% |
| !!! | AAATTTTATGTTTCATACAT+CGG | + | chr7_1:78892470-78892489 | None:intergenic | 15.0% |
| !!! | AAATTTTATTTAGCAAATCA+AGG | - | chr7_1:78892484-78892503 | Msa1041290:intron | 15.0% |
| !!! | GACTTGTTAAAAAATAATTC+TGG | - | chr7_1:78889913-78889932 | Msa1041290:intron | 20.0% |
| !!! | CAATTGGTTTCAATTTTTTT+GGG | - | chr7_1:78889950-78889969 | Msa1041290:intron | 20.0% |
| !! | AAAAATAGTTGAAAGCAATT+GGG | - | chr7_1:78890092-78890111 | Msa1041290:intron | 20.0% |
| !! | TAAAACAACATAGTAATTGA+AGG | - | chr7_1:78890447-78890466 | Msa1041290:intron | 20.0% |
| !! | TTAACAAAGTTATAGCTAAA+AGG | + | chr7_1:78890615-78890634 | None:intergenic | 20.0% |
| !!! | TATTATTTTCTCCAAAAGAT+TGG | + | chr7_1:78890901-78890920 | None:intergenic | 20.0% |
| !!! | CTTGCTTTTTTAAAATTTCA+TGG | - | chr7_1:78891293-78891312 | Msa1041290:intron | 20.0% |
| !! | TTTCTATTCTTAATAGCATA+CGG | - | chr7_1:78891645-78891664 | Msa1041290:intron | 20.0% |
| !! | ATAATAAAACCTCTATTTAG+TGG | - | chr7_1:78891761-78891780 | Msa1041290:intron | 20.0% |
| !! | TAATAAAACCTCTATTTAGT+GGG | - | chr7_1:78891762-78891781 | Msa1041290:intron | 20.0% |
| !!! | AGTGTATATTTTTTTTGTCT+TGG | - | chr7_1:78891816-78891835 | Msa1041290:intron | 20.0% |
| !! | AATAAATAATGTCATATGGA+GGG | + | chr7_1:78892054-78892073 | None:intergenic | 20.0% |
| !! | TAATAAATAATGTCATATGG+AGG | + | chr7_1:78892055-78892074 | None:intergenic | 20.0% |
| !!! | AATTTTATGTTTCATACATC+GGG | + | chr7_1:78892469-78892488 | None:intergenic | 20.0% |
| !! | AAGAAGTAAGTATTATTCTA+GGG | + | chr7_1:78892827-78892846 | None:intergenic | 20.0% |
| !! | AAAGAAGTAAGTATTATTCT+AGG | + | chr7_1:78892828-78892847 | None:intergenic | 20.0% |
| !! | AACATTAAATTTAAGAATCC+CGG | + | chr7_1:78892942-78892961 | None:intergenic | 20.0% |
| !!! | CATTTTTTAATTATGTTTGC+AGG | - | chr7_1:78893012-78893031 | Msa1041290:intron | 20.0% |
| ! | TGTTCAAAAAAAAAAGATGC+TGG | + | chr7_1:78889711-78889730 | None:intergenic | 25.0% |
| ! | CTTAATAGTTTAACCTTTCA+AGG | + | chr7_1:78889820-78889839 | None:intergenic | 25.0% |
| !!! | ATTTTTTAACAAGTCTGCAA+AGG | + | chr7_1:78889908-78889927 | None:intergenic | 25.0% |
| !!! | GCAATTGGTTTCAATTTTTT+TGG | - | chr7_1:78889949-78889968 | Msa1041290:intron | 25.0% |
| ! | CAAAAATAGTTGAAAGCAAT+TGG | - | chr7_1:78890091-78890110 | Msa1041290:intron | 25.0% |
| !! | TGAGTTTAAATTAGTTGGTA+AGG | + | chr7_1:78890268-78890287 | None:intergenic | 25.0% |
| !! | TGCTTTGAGTTTAAATTAGT+TGG | + | chr7_1:78890273-78890292 | None:intergenic | 25.0% |
| ! | ACACCTTCATAAAAATTAGT+TGG | - | chr7_1:78890638-78890657 | Msa1041290:intron | 25.0% |
| !! | ACACCAACTAATTTTTATGA+AGG | + | chr7_1:78890644-78890663 | None:intergenic | 25.0% |
| !!! | TAATTTTAAGACTTGATGCT+AGG | + | chr7_1:78890986-78891005 | None:intergenic | 25.0% |
| ! | TCATCTGCATAAATATCATA+GGG | + | chr7_1:78891404-78891423 | None:intergenic | 25.0% |
| ! | TTCATCTGCATAAATATCAT+AGG | + | chr7_1:78891405-78891424 | None:intergenic | 25.0% |
| ! | CAAATAATTAGCAGAACATT+CGG | + | chr7_1:78891553-78891572 | None:intergenic | 25.0% |
| ! | AGCAGTCATTCTTATATAAT+TGG | - | chr7_1:78891581-78891600 | Msa1041290:intron | 25.0% |
| !!! | ATAGTTTTGTTAGAACACTA+TGG | + | chr7_1:78891941-78891960 | None:intergenic | 25.0% |
| ! | ATAAGAGAAACTATCAAGAA+GGG | + | chr7_1:78891992-78892011 | None:intergenic | 25.0% |
| ! | TATAAGAGAAACTATCAAGA+AGG | + | chr7_1:78891993-78892012 | None:intergenic | 25.0% |
| !! | AGTTTCTCTTATAGTTTTCT+AGG | - | chr7_1:78892000-78892019 | Msa1041290:intron | 25.0% |
| ! | ATAAATAATGTCATATGGAG+GGG | + | chr7_1:78892053-78892072 | None:intergenic | 25.0% |
| ! | ATATTCTTTACCATAAACAG+TGG | - | chr7_1:78892398-78892417 | Msa1041290:intron | 25.0% |
| !! | TCTGTATACTCTTGAAATTT+TGG | - | chr7_1:78892529-78892548 | Msa1041290:intron | 25.0% |
| !!! | CTATTTTTCCATCAAATGAT+TGG | + | chr7_1:78892778-78892797 | None:intergenic | 25.0% |
| !! | TGTTACTCATTTTCATTCTT+TGG | - | chr7_1:78892973-78892992 | Msa1041290:intron | 25.0% |
| !! | GTTACTCATTTTCATTCTTT+GGG | - | chr7_1:78892974-78892993 | Msa1041290:intron | 25.0% |
| ! | TATGATTGACTGTATAAGAA+AGG | - | chr7_1:78893090-78893109 | Msa1041290:intron | 25.0% |
| ! | GAAAATGTGAAACAAGAAAA+CGG | + | chr7_1:78893222-78893241 | None:intergenic | 25.0% |
| AACAACCAGCATCTTAAAAA+TGG | - | chr7_1:78889733-78889752 | Msa1041290:CDS | 30.0% | |
| !!! | TTCTACCATTTTTAAGATGC+TGG | + | chr7_1:78889741-78889760 | None:intergenic | 30.0% |
| TATTCATTGATGAGAGAAAG+AGG | - | chr7_1:78890053-78890072 | Msa1041290:intron | 30.0% | |
| ATTCATTGATGAGAGAAAGA+GGG | - | chr7_1:78890054-78890073 | Msa1041290:intron | 30.0% | |
| AAAAAAAACCATGTCTCCTA+CGG | - | chr7_1:78890198-78890217 | Msa1041290:CDS | 30.0% | |
| !! | AATTAGTTGGTAAGGTTGTA+TGG | + | chr7_1:78890260-78890279 | None:intergenic | 30.0% |
| TTGCTAAAAGACACTTTCAT+AGG | + | chr7_1:78890567-78890586 | None:intergenic | 30.0% | |
| ! | TTTTAGCAAGCCACATTTTA+AGG | - | chr7_1:78890578-78890597 | Msa1041290:CDS | 30.0% |
| AGAAATCACACCTTAAAATG+TGG | + | chr7_1:78890591-78890610 | None:intergenic | 30.0% | |
| GTTTCATCTATGATGACATT+CGG | - | chr7_1:78890762-78890781 | Msa1041290:intron | 30.0% | |
| AACACAAAGCTAAGTACATA+TGG | + | chr7_1:78890853-78890872 | None:intergenic | 30.0% | |
| ! | AGTCAAATAGTCCAATCTTT+TGG | - | chr7_1:78890887-78890906 | Msa1041290:intron | 30.0% |
| TTAATTCACGTACACTATGA+AGG | + | chr7_1:78891041-78891060 | None:intergenic | 30.0% | |
| CTCCAATAATTAACAACCAA+TGG | - | chr7_1:78891065-78891084 | Msa1041290:intron | 30.0% | |
| ! | TGCCATTGGTTGTTAATTAT+TGG | + | chr7_1:78891070-78891089 | None:intergenic | 30.0% |
| ACATAGTACGACAACAAATA+CGG | + | chr7_1:78891324-78891343 | None:intergenic | 30.0% | |
| CATCTGCATAAATATCATAG+GGG | + | chr7_1:78891403-78891422 | None:intergenic | 30.0% | |
| CTTGTTTACAAATCCACTTT+GGG | - | chr7_1:78891487-78891506 | Msa1041290:intron | 30.0% | |
| !!! | AGAGGTTTTATTATCTTCCA+TGG | + | chr7_1:78891755-78891774 | None:intergenic | 30.0% |
| TTTAATCACGAAAAAGCAAC+TGG | - | chr7_1:78892320-78892339 | Msa1041290:intron | 30.0% | |
| ATTAACACTTTAATGACGGT+TGG | - | chr7_1:78892374-78892393 | Msa1041290:intron | 30.0% | |
| ! | CAATGTGGATGCAAAAATTT+TGG | + | chr7_1:78892645-78892664 | None:intergenic | 30.0% |
| GTTAAAGATTGCACAATTGT+AGG | - | chr7_1:78892707-78892726 | Msa1041290:intron | 30.0% | |
| TAACTTTGCCAATCATTTGA+TGG | - | chr7_1:78892767-78892786 | Msa1041290:intron | 30.0% | |
| TAGGGTTCTTTAAACATTGA+AGG | + | chr7_1:78892809-78892828 | None:intergenic | 30.0% | |
| !! | AGAAAGGTTTTTCAACAAGA+AGG | - | chr7_1:78893106-78893125 | Msa1041290:intron | 30.0% |
| ! | GAGAAAGTATGTCAAACTTG+CGG | + | chr7_1:78889658-78889677 | None:intergenic | 35.0% |
| ! | ATGCTGGTTGTTGTAGTTAT+GGG | + | chr7_1:78889695-78889714 | None:intergenic | 35.0% |
| !!! | CTGGTTATTTTTATCCTGTG+AGG | - | chr7_1:78889878-78889897 | Msa1041290:intron | 35.0% |
| ! | GATGAAAGTTAACTAGCTCT+TGG | + | chr7_1:78890147-78890166 | None:intergenic | 35.0% |
| GCTAGTTAACTTTCATCCAA+TGG | - | chr7_1:78890150-78890169 | Msa1041290:intron | 35.0% | |
| CTAAAAGACACTTTCATAGG+TGG | + | chr7_1:78890564-78890583 | None:intergenic | 35.0% | |
| TACACTATGAAGGTGAAGAT+AGG | + | chr7_1:78891031-78891050 | None:intergenic | 35.0% | |
| ATAGTACGACAACAAATACG+GGG | + | chr7_1:78891322-78891341 | None:intergenic | 35.0% | |
| CATAGTACGACAACAAATAC+GGG | + | chr7_1:78891323-78891342 | None:intergenic | 35.0% | |
| !! | ATTTGTTGTCGTACTATGTG+TGG | - | chr7_1:78891325-78891344 | Msa1041290:CDS | 35.0% |
| ! | TTTGTTGTCGTACTATGTGT+GGG | - | chr7_1:78891326-78891345 | Msa1041290:CDS | 35.0% |
| CCATATTAGATCCAACTGAA+AGG | + | chr7_1:78891436-78891455 | None:intergenic | 35.0% | |
| CCTTTCAGTTGGATCTAATA+TGG | - | chr7_1:78891433-78891452 | Msa1041290:intron | 35.0% | |
| ! | CCAAAGTGGATTTGTAAACA+AGG | + | chr7_1:78891489-78891508 | None:intergenic | 35.0% |
| ! | CCTTGTTTACAAATCCACTT+TGG | - | chr7_1:78891486-78891505 | Msa1041290:intron | 35.0% |
| CTTAATAGCATACGGTTTCT+AGG | - | chr7_1:78891653-78891672 | Msa1041290:intron | 35.0% | |
| TGTGTGGTAATCAAATGAAG+AGG | - | chr7_1:78891678-78891697 | Msa1041290:intron | 35.0% | |
| CAAACAATGTCAAATGCACA+AGG | + | chr7_1:78891713-78891732 | None:intergenic | 35.0% | |
| CTTGTGCATTTGACATTGTT+TGG | - | chr7_1:78891711-78891730 | Msa1041290:intron | 35.0% | |
| TTGTTCAACCCACTAAATAG+AGG | + | chr7_1:78891773-78891792 | None:intergenic | 35.0% | |
| GGGTCTTAAGATTAATGAGT+TGG | + | chr7_1:78891972-78891991 | None:intergenic | 35.0% | |
| ACGTAATAATGCGTGTAAGA+TGG | + | chr7_1:78892094-78892113 | None:intergenic | 35.0% | |
| TTCATACATCGGGAATTGAA+TGG | + | chr7_1:78892459-78892478 | None:intergenic | 35.0% | |
| TATTCAGCAACATACCTCAT+GGG | + | chr7_1:78892675-78892694 | None:intergenic | 35.0% | |
| TTATTCAGCAACATACCTCA+TGG | + | chr7_1:78892676-78892695 | None:intergenic | 35.0% | |
| AGAGGAAAGGATGAAAAAAG+TGG | + | chr7_1:78892875-78892894 | None:intergenic | 35.0% | |
| AAAGCTGGTGAATGTGATTA+CGG | + | chr7_1:78893188-78893207 | None:intergenic | 35.0% | |
| TGCGAGTTTGTCATTCATGA+AGG | - | chr7_1:78889574-78889593 | Msa1041290:CDS | 40.0% | |
| GCGAGTTTGTCATTCATGAA+GGG | - | chr7_1:78889575-78889594 | Msa1041290:CDS | 40.0% | |
| AAAGTATGTCAAACTTGCGG+CGG | + | chr7_1:78889655-78889674 | None:intergenic | 40.0% | |
| ! | TGCTGGTTGTTGTAGTTATG+GGG | + | chr7_1:78889694-78889713 | None:intergenic | 40.0% |
| ! | GATGCTGGTTGTTGTAGTTA+TGG | + | chr7_1:78889696-78889715 | None:intergenic | 40.0% |
| ! | TGTCTGGTTCATACCTTGAA+AGG | - | chr7_1:78889804-78889823 | Msa1041290:intron | 40.0% |
| GGATTTGTGACTGTAGCAAT+TGG | - | chr7_1:78889934-78889953 | Msa1041290:intron | 40.0% | |
| AGTTGAAAGCAATTGGGTGT+TGG | - | chr7_1:78890098-78890117 | Msa1041290:intron | 40.0% | |
| TTTAATAGGTCTCCTACCGT+AGG | + | chr7_1:78890217-78890236 | None:intergenic | 40.0% | |
| TATGAAACTACATGTGCGAC+AGG | + | chr7_1:78890379-78890398 | None:intergenic | 40.0% | |
| TGTCGCACATGTAGTTTCAT+AGG | - | chr7_1:78890378-78890397 | Msa1041290:intron | 40.0% | |
| ATTGCAAGTGTCATGTGTGT+TGG | + | chr7_1:78890416-78890435 | None:intergenic | 40.0% | |
| CTAGGATTGAGTTCTCTCTA+TGG | + | chr7_1:78890968-78890987 | None:intergenic | 40.0% | |
| !! | CTTTTTGTTGCTTCTGCCAT+TGG | + | chr7_1:78891084-78891103 | None:intergenic | 40.0% |
| CAATGGCAGAAGCAACAAAA+AGG | - | chr7_1:78891082-78891101 | Msa1041290:intron | 40.0% | |
| GTACTATGTGTGGGATTCAT+AGG | - | chr7_1:78891335-78891354 | Msa1041290:CDS | 40.0% | |
| TAGATCCAACTGAAAGGTGA+TGG | + | chr7_1:78891430-78891449 | None:intergenic | 40.0% | |
| !! | ATACGGTTTCTAGGATTGTG+TGG | - | chr7_1:78891662-78891681 | Msa1041290:intron | 40.0% |
| AGCTCTATGTATCACATCCA+TGG | - | chr7_1:78891735-78891754 | Msa1041290:intron | 40.0% | |
| CTTCGTTTGATTCATGTAGC+CGG | + | chr7_1:78891918-78891937 | None:intergenic | 40.0% | |
| AGTCAAATCACTAGAGGTAG+GGG | + | chr7_1:78892030-78892049 | None:intergenic | 40.0% | |
| GAGTCAAATCACTAGAGGTA+GGG | + | chr7_1:78892031-78892050 | None:intergenic | 40.0% | |
| ATCACGAAAAAGCAACTGGA+TGG | - | chr7_1:78892324-78892343 | Msa1041290:intron | 40.0% | |
| AAAAGCAACTGGATGGTCAA+TGG | - | chr7_1:78892331-78892350 | Msa1041290:intron | 40.0% | |
| AGGTACAAGACCACTGTTTA+TGG | + | chr7_1:78892411-78892430 | None:intergenic | 40.0% | |
| AACATGACTGATACCAGCTA+GGG | + | chr7_1:78892435-78892454 | None:intergenic | 40.0% | |
| GAGTATACAGAGAAGAGAAC+AGG | + | chr7_1:78892520-78892539 | None:intergenic | 40.0% | |
| ATTCAGCAACATACCTCATG+GGG | + | chr7_1:78892674-78892693 | None:intergenic | 40.0% | |
| ! | GTTATTTCATTCGCAAGACC+AGG | + | chr7_1:78892751-78892770 | None:intergenic | 40.0% |
| GTTCCAGATTGCAAGAACAA+GGG | - | chr7_1:78893041-78893060 | Msa1041290:intron | 40.0% | |
| ! | TTTCAACAAGAAGGTGTACC+TGG | - | chr7_1:78893115-78893134 | Msa1041290:intron | 40.0% |
| ACGGTGTATCATTTCAAAGC+TGG | + | chr7_1:78893203-78893222 | None:intergenic | 40.0% | |
| ATATGAGGATGTGGATCAGA+AGG | + | chr7_1:78893244-78893263 | None:intergenic | 40.0% | |
| GAAGCCTCAAATGCTCAAAC+AGG | - | chr7_1:78889781-78889800 | Msa1041290:intron | 45.0% | |
| GACACCTGTTTGAGCATTTG+AGG | + | chr7_1:78889788-78889807 | None:intergenic | 45.0% | |
| CAAATGCTCAAACAGGTGTC+TGG | - | chr7_1:78889788-78889807 | Msa1041290:intron | 45.0% | |
| !! | TGAAAGCAATTGGGTGTTGG+AGG | - | chr7_1:78890101-78890120 | Msa1041290:intron | 45.0% |
| AAAACCATGTCTCCTACGGT+AGG | - | chr7_1:78890202-78890221 | Msa1041290:CDS | 45.0% | |
| CTACGGTGGGAGACTTTAAT+AGG | + | chr7_1:78890231-78890250 | None:intergenic | 45.0% | |
| TTAAAGTCTCCCACCGTAGA+TGG | - | chr7_1:78890232-78890251 | Msa1041290:intron | 45.0% | |
| AGGTTGTATGGCTCCATCTA+CGG | + | chr7_1:78890248-78890267 | None:intergenic | 45.0% | |
| ACATGAGCAGTGATGTATGC+AGG | - | chr7_1:78890479-78890498 | Msa1041290:intron | 45.0% | |
| CATGAGCAGTGATGTATGCA+GGG | - | chr7_1:78890480-78890499 | Msa1041290:intron | 45.0% | |
| ! | CTACGAAGAGAGCATGTTCT+AGG | + | chr7_1:78890824-78890843 | None:intergenic | 45.0% |
| GAAAGCCATCACCTTTCAGT+TGG | - | chr7_1:78891422-78891441 | Msa1041290:intron | 45.0% | |
| !! | CTAGTCTTGACAACCCAAAG+TGG | + | chr7_1:78891503-78891522 | None:intergenic | 45.0% |
| ! | AGGCTTGGTTGTTGTTGTTG+TGG | + | chr7_1:78891878-78891897 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr7_1:78891891-78891910 | Msa1041290:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr7_1:78891892-78891911 | Msa1041290:intron | 45.0% |
| GGAGTCAAATCACTAGAGGT+AGG | + | chr7_1:78892032-78892051 | None:intergenic | 45.0% | |
| ! | TGCCTTTTTAATGCAGACCC+AGG | - | chr7_1:78892199-78892218 | Msa1041290:intron | 45.0% |
| ! | GCCTTTTTAATGCAGACCCA+GGG | - | chr7_1:78892200-78892219 | Msa1041290:intron | 45.0% |
| TCCCTGGGTCTGCATTAAAA+AGG | + | chr7_1:78892204-78892223 | None:intergenic | 45.0% | |
| AACACCAGATCTCATTCCCT+GGG | + | chr7_1:78892219-78892238 | None:intergenic | 45.0% | |
| !! | GATCTGGTGTTGTGCCATAT+AGG | - | chr7_1:78892228-78892247 | Msa1041290:intron | 45.0% |
| GCAGATAGTGTGCTCCTATA+TGG | + | chr7_1:78892245-78892264 | None:intergenic | 45.0% | |
| ATTGAGGAGAATTGCAAGCG+AGG | - | chr7_1:78892265-78892284 | Msa1041290:intron | 45.0% | |
| CAACATGACTGATACCAGCT+AGG | + | chr7_1:78892436-78892455 | None:intergenic | 45.0% | |
| CTCATGGGGATATGTCAATG+TGG | + | chr7_1:78892660-78892679 | None:intergenic | 45.0% | |
| CACATTGACATATCCCCATG+AGG | - | chr7_1:78892658-78892677 | Msa1041290:intron | 45.0% | |
| TAGTCATACCTCTTGATGCC+TGG | - | chr7_1:78892730-78892749 | Msa1041290:intron | 45.0% | |
| AAGTTGGGGCAGTTAAAGAG+AGG | + | chr7_1:78892893-78892912 | None:intergenic | 45.0% | |
| GGATATGGCTCTCTAAGTTG+GGG | + | chr7_1:78892907-78892926 | None:intergenic | 45.0% | |
| GGGATATGGCTCTCTAAGTT+GGG | + | chr7_1:78892908-78892927 | None:intergenic | 45.0% | |
| AGGGATATGGCTCTCTAAGT+TGG | + | chr7_1:78892909-78892928 | None:intergenic | 45.0% | |
| CATATCCCTCTGAATTGAGC+CGG | - | chr7_1:78892920-78892939 | Msa1041290:intron | 45.0% | |
| ATATCCCTCTGAATTGAGCC+GGG | - | chr7_1:78892921-78892940 | Msa1041290:intron | 45.0% | |
| CGTTCCAGATTGCAAGAACA+AGG | - | chr7_1:78893040-78893059 | Msa1041290:intron | 45.0% | |
| ATGCCCTTGTTCTTGCAATC+TGG | + | chr7_1:78893047-78893066 | None:intergenic | 45.0% | |
| ! | CACTCTGAGAAACGATACTC+TGG | - | chr7_1:78893067-78893086 | Msa1041290:intron | 45.0% |
| TGTTGTCCTCAAAAGGTTGG+TGG | + | chr7_1:78893158-78893177 | None:intergenic | 45.0% | |
| !! | TGGTGTTGTCCTCAAAAGGT+TGG | + | chr7_1:78893161-78893180 | None:intergenic | 45.0% |
| TCTGCAAAGGTTCACCTCAC+AGG | + | chr7_1:78889895-78889914 | None:intergenic | 50.0% | |
| TGTATGGCTCCATCTACGGT+GGG | + | chr7_1:78890244-78890263 | None:intergenic | 50.0% | |
| TTGTATGGCTCCATCTACGG+TGG | + | chr7_1:78890245-78890264 | None:intergenic | 50.0% | |
| TCTAATATGGCAGCTGCTGC+TGG | - | chr7_1:78891446-78891465 | Msa1041290:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr7_1:78891893-78891912 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr7_1:78891890-78891909 | Msa1041290:intron | 50.0% |
| GAGGGGAGTCAAATCACTAG+AGG | + | chr7_1:78892036-78892055 | None:intergenic | 50.0% | |
| CAACACCAGATCTCATTCCC+TGG | + | chr7_1:78892220-78892239 | None:intergenic | 50.0% | |
| GGAGCACACTATCTGCATTG+AGG | - | chr7_1:78892249-78892268 | Msa1041290:intron | 50.0% | |
| AGGAGAATTGCAAGCGAGGA+GGG | - | chr7_1:78892269-78892288 | Msa1041290:intron | 50.0% | |
| GACGCAGCAGTCGATAAACT+TGG | - | chr7_1:78892587-78892606 | Msa1041290:intron | 50.0% | |
| GGGGCAGTTAAAGAGAGGAA+AGG | + | chr7_1:78892888-78892907 | None:intergenic | 50.0% | |
| CGGCTCAATTCAGAGGGATA+TGG | + | chr7_1:78892922-78892941 | None:intergenic | 50.0% | |
| GAATCCCGGCTCAATTCAGA+GGG | + | chr7_1:78892928-78892947 | None:intergenic | 50.0% | |
| AGAATCCCGGCTCAATTCAG+AGG | + | chr7_1:78892929-78892948 | None:intergenic | 50.0% | |
| !! | AAAGGTTGGTGGCACATCCT+CGG | + | chr7_1:78893147-78893166 | None:intergenic | 50.0% |
| ! | GATGTGCCACCAACCTTTTG+AGG | - | chr7_1:78893149-78893168 | Msa1041290:intron | 50.0% |
| !! | CAGCTGGTGTTGTCCTCAAA+AGG | + | chr7_1:78893165-78893184 | None:intergenic | 50.0% |
| GTGAATGTGATTACGGCAGC+TGG | + | chr7_1:78893181-78893200 | None:intergenic | 50.0% | |
| GTATGTCAAACTTGCGGCGG+TGG | + | chr7_1:78889652-78889671 | None:intergenic | 55.0% | |
| GTCTCCTACCGTAGGAGACA+TGG | + | chr7_1:78890209-78890228 | None:intergenic | 55.0% | |
| CTTATCCCACTAAGTGGGGC+CGG | - | chr7_1:78891896-78891915 | Msa1041290:intron | 55.0% | |
| CAGACCCAGGGAATGAGATC+TGG | - | chr7_1:78892212-78892231 | Msa1041290:intron | 55.0% | |
| GAGGAGAATTGCAAGCGAGG+AGG | - | chr7_1:78892268-78892287 | Msa1041290:intron | 55.0% | |
| ! | TTGCAAGCGAGGAGGGCATA+CGG | - | chr7_1:78892276-78892295 | Msa1041290:intron | 55.0% |
| TGACTGATACCAGCTAGGGC+AGG | + | chr7_1:78892431-78892450 | None:intergenic | 55.0% | |
| TCGCAAGACCAGGCATCAAG+AGG | + | chr7_1:78892741-78892760 | None:intergenic | 55.0% | |
| !! | GGTGTACCTGGCTTTTACCG+AGG | - | chr7_1:78893127-78893146 | Msa1041290:intron | 55.0% |
| GCACATCCTCGGTAAAAGCC+AGG | + | chr7_1:78893136-78893155 | None:intergenic | 55.0% | |
| AACTTGCGGCGGTGGATCTG+CGG | + | chr7_1:78889644-78889663 | None:intergenic | 60.0% | |
| CGGCCCCACTTAGTGGGATA+AGG | + | chr7_1:78891898-78891917 | None:intergenic | 60.0% | |
| TGTAGCCGGCCCCACTTAGT+GGG | + | chr7_1:78891904-78891923 | None:intergenic | 60.0% | |
| ATGTAGCCGGCCCCACTTAG+TGG | + | chr7_1:78891905-78891924 | None:intergenic | 60.0% | |
| ! | TGCAAGCGAGGAGGGCATAC+GGG | - | chr7_1:78892277-78892296 | Msa1041290:intron | 60.0% |
| CATACGGGGGCTGTACAGGT+TGG | - | chr7_1:78892292-78892311 | Msa1041290:intron | 60.0% | |
| ! | GGTCTTGTACCTGCCCTAGC+TGG | - | chr7_1:78892419-78892438 | Msa1041290:intron | 60.0% |
| ATGGCAGCTGCTGCTGGTGC+TGG | - | chr7_1:78891452-78891471 | Msa1041290:intron | 65.0% | |
| ! | GCAAGCGAGGAGGGCATACG+GGG | - | chr7_1:78892278-78892297 | Msa1041290:intron | 65.0% |
| ! | CAAGCGAGGAGGGCATACGG+GGG | - | chr7_1:78892279-78892298 | Msa1041290:intron | 65.0% |
| AGGGCATACGGGGGCTGTAC+AGG | - | chr7_1:78892288-78892307 | Msa1041290:intron | 65.0% | |
| TTGCGGCGGTGGATCTGCGG+TGG | + | chr7_1:78889641-78889660 | None:intergenic | 70.0% | |
| CGGCGGTGGATCTGCGGTGG+TGG | + | chr7_1:78889638-78889657 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 78889560 | 78893270 | 78889560 | ID=Msa1041290;Name=Msa1041290 |
| chr7_1 | mRNA | 78889560 | 78893270 | 78889560 | ID=Msa1041290-mRNA-1;Parent=Msa1041290;Name=Msa1041290-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0|0|0.83|1|1|6|0|198 |
| chr7_1 | exon | 78893234 | 78893270 | 78893234 | ID=Msa1041290-mRNA-1:exon:21180;Parent=Msa1041290-mRNA-1 |
| chr7_1 | exon | 78891301 | 78891410 | 78891301 | ID=Msa1041290-mRNA-1:exon:21179;Parent=Msa1041290-mRNA-1 |
| chr7_1 | exon | 78890521 | 78890615 | 78890521 | ID=Msa1041290-mRNA-1:exon:21178;Parent=Msa1041290-mRNA-1 |
| chr7_1 | exon | 78890390 | 78890412 | 78890390 | ID=Msa1041290-mRNA-1:exon:21177;Parent=Msa1041290-mRNA-1 |
| chr7_1 | exon | 78890151 | 78890245 | 78890151 | ID=Msa1041290-mRNA-1:exon:21176;Parent=Msa1041290-mRNA-1 |
| chr7_1 | exon | 78889560 | 78889796 | 78889560 | ID=Msa1041290-mRNA-1:exon:21175;Parent=Msa1041290-mRNA-1 |
| chr7_1 | CDS | 78893234 | 78893270 | 78893234 | ID=Msa1041290-mRNA-1:cds;Parent=Msa1041290-mRNA-1 |
| chr7_1 | CDS | 78891301 | 78891410 | 78891301 | ID=Msa1041290-mRNA-1:cds;Parent=Msa1041290-mRNA-1 |
| chr7_1 | CDS | 78890521 | 78890615 | 78890521 | ID=Msa1041290-mRNA-1:cds;Parent=Msa1041290-mRNA-1 |
| chr7_1 | CDS | 78890390 | 78890412 | 78890390 | ID=Msa1041290-mRNA-1:cds;Parent=Msa1041290-mRNA-1 |
| chr7_1 | CDS | 78890151 | 78890245 | 78890151 | ID=Msa1041290-mRNA-1:cds;Parent=Msa1041290-mRNA-1 |
| chr7_1 | CDS | 78889560 | 78889796 | 78889560 | ID=Msa1041290-mRNA-1:cds;Parent=Msa1041290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
