AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1049970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1049970 MtrunA17_Chr7g0218811 89.556 450 37 2 1 450 11 450 0.0 831
Msa1049970 MtrunA17_Chr7g0218821 83.186 452 71 3 1 449 1 450 0.0 772
Msa1049970 MtrunA17_Chr7g0218831 67.338 447 135 2 3 449 4 439 0.0 637
Msa1049970 MtrunA17_Chr7g0218841 67.188 448 135 3 3 449 4 440 0.0 630
Msa1049970 MtrunA17_Chr7g0218791 57.778 450 183 3 1 449 1 444 0.0 544
Msa1049970 MtrunA17_Chr3g0118661 33.867 437 252 10 4 412 12 439 5.41e-75 243
Msa1049970 MtrunA17_Chr3g0078841 32.211 475 281 11 4 446 9 474 5.31e-74 240
Msa1049970 MtrunA17_Chr3g0118671 32.278 474 280 11 5 446 6 470 5.61e-72 234
Msa1049970 MtrunA17_Chr5g0426431 32.773 476 279 13 3 447 10 475 7.03e-72 234
Msa1049970 MtrunA17_Chr3g0092641 32.489 474 277 14 3 447 10 469 7.63e-72 234
Msa1049970 MtrunA17_Chr3g0118691 31.579 475 284 11 4 446 14 479 1.37e-71 234
Msa1049970 MtrunA17_Chr3g0118771 32.211 475 281 13 4 446 20 485 1.55e-71 234
Msa1049970 MtrunA17_Chr6g0454341 31.789 475 283 11 4 446 9 474 1.69e-71 233
Msa1049970 MtrunA17_Chr8g0336331 32.135 473 281 11 5 446 10 473 1.54e-70 231
Msa1049970 MtrunA17_Chr5g0448551 30.349 458 290 11 1 446 3 443 2.27e-70 230
Msa1049970 MtrunA17_Chr6g0454331 31.458 480 284 13 4 447 6 476 4.10e-70 230
Msa1049970 MtrunA17_Chr6g0454401 32.568 479 277 15 4 446 9 477 7.12e-70 229
Msa1049970 MtrunA17_Chr3g0118701 32.965 452 265 12 4 426 14 456 1.69e-69 228
Msa1049970 MtrunA17_Chr2g0278711 31.656 477 281 14 4 447 10 474 3.26e-69 228
Msa1049970 MtrunA17_Chr3g0118711 31.637 452 271 10 4 426 12 454 3.31e-69 228
Msa1049970 MtrunA17_Chr6g0454321 31.798 456 270 12 5 428 10 456 5.04e-69 231
Msa1049970 MtrunA17_Chr7g0217881 31.838 468 276 11 4 446 9 458 1.66e-67 223
Msa1049970 MtrunA17_Chr6g0454151 31.315 479 288 12 4 450 9 478 4.71e-67 222
Msa1049970 MtrunA17_Chr6g0464871 31.263 467 274 11 3 446 21 463 8.91e-67 221
Msa1049970 MtrunA17_Chr6g0454301 31.579 475 284 11 4 446 262 727 2.43e-66 226
Msa1049970 MtrunA17_Chr6g0454301 35.776 232 131 5 233 450 3 230 5.38e-39 149
Msa1049970 MtrunA17_Chr6g0454191 30.962 478 286 12 4 446 9 477 3.68e-66 219
Msa1049970 MtrunA17_Chr6g0454291 30.689 479 285 13 4 446 6 473 5.53e-66 219
Msa1049970 MtrunA17_Chr6g0454261 29.916 478 290 12 4 446 9 476 1.31e-65 218
Msa1049970 MtrunA17_Chr6g0453951 30.498 482 290 14 4 450 56 527 1.70e-65 219
Msa1049970 MtrunA17_Chr6g0454181 30.818 477 287 13 4 446 9 476 2.40e-65 217
Msa1049970 MtrunA17_Chr6g0454141 29.707 478 291 12 4 446 9 476 2.67e-65 217
Msa1049970 MtrunA17_Chr7g0249981 30.108 465 278 13 5 447 25 464 4.59e-65 217
Msa1049970 MtrunA17_Chr6g0454131 32.150 479 277 13 4 446 9 475 7.05e-65 216
Msa1049970 MtrunA17_Chr6g0464921 31.770 469 270 13 4 447 10 453 1.04e-64 215
Msa1049970 MtrunA17_Chr6g0454211 30.544 478 287 13 4 446 296 763 2.65e-64 221
Msa1049970 MtrunA17_Chr6g0454211 35.625 160 63 5 219 366 105 236 1.63e-20 94.7
Msa1049970 MtrunA17_Chr3g0118751 31.635 471 260 14 4 446 5 441 1.05e-63 212
Msa1049970 MtrunA17_Chr6g0464841 31.478 467 273 12 3 446 9 451 1.45e-63 212
Msa1049970 MtrunA17_Chr8g0359821 31.315 479 280 14 4 446 9 474 2.29e-63 212
Msa1049970 MtrunA17_Chr6g0454201 32.150 479 278 15 4 446 10 477 2.55e-63 212
Msa1049970 MtrunA17_Chr6g0464861 30.968 465 275 11 4 446 10 450 2.59e-63 211
Msa1049970 MtrunA17_Chr6g0454361 31.524 479 283 14 4 447 10 478 3.02e-63 212
Msa1049970 MtrunA17_Chr6g0454121 31.303 476 285 12 4 446 9 475 4.59e-63 211
Msa1049970 MtrunA17_Chr6g0464881 30.149 471 282 13 3 450 9 455 2.26e-61 206
Msa1049970 MtrunA17_Chr4g0053501 30.335 478 272 15 5 447 11 462 3.71e-61 207
Msa1049970 MtrunA17_Chr6g0453961 29.461 482 296 12 4 450 18 490 5.15e-61 206
Msa1049970 MtrunA17_Chr6g0452771 30.689 479 285 12 4 446 9 476 2.72e-60 204
Msa1049970 MtrunA17_Chr7g0250001 29.336 467 279 12 5 447 6 445 9.59e-60 202
Msa1049970 MtrunA17_Chr5g0412111 30.849 483 276 13 1 448 1 460 1.48e-59 202
Msa1049970 MtrunA17_Chr4g0050341 31.020 461 268 14 4 427 18 465 2.35e-59 202
Msa1049970 MtrunA17_Chr5g0414331 29.851 469 275 16 5 448 13 452 5.21e-59 200
Msa1049970 MtrunA17_Chr1g0207981 27.601 471 300 9 5 447 13 470 7.20e-59 200
Msa1049970 MtrunA17_Chr5g0412131 31.106 479 279 14 2 448 9 468 3.36e-58 198
Msa1049970 MtrunA17_Chr4g0053321 28.903 474 282 13 6 447 27 477 3.39e-58 199
Msa1049970 MtrunA17_Chr5g0414321 29.025 472 279 14 5 450 11 452 8.97e-58 197
Msa1049970 MtrunA17_Chr6g0454351 29.046 482 280 14 4 450 11 465 3.20e-57 196
Msa1049970 MtrunA17_Chr3g0112761 31.749 463 271 12 5 446 8 446 7.09e-57 194
Msa1049970 MtrunA17_Chr3g0098111 29.787 470 290 16 5 446 9 466 8.65e-55 189
Msa1049970 MtrunA17_Chr6g0454251 30.479 397 236 11 4 367 6 395 3.33e-54 186
Msa1049970 MtrunA17_Chr7g0249931 28.753 473 276 16 5 447 40 481 1.43e-53 186
Msa1049970 MtrunA17_Chr1g0207861 30.851 470 285 14 5 446 8 465 2.19e-53 186
Msa1049970 MtrunA17_Chr8g0377921 28.926 484 282 18 3 447 1 461 4.59e-53 184
Msa1049970 MtrunA17_Chr3g0122001 28.631 482 288 14 5 447 486 950 9.61e-53 190
Msa1049970 MtrunA17_Chr3g0122001 27.536 483 293 16 5 447 6 471 1.75e-45 169
Msa1049970 MtrunA17_Chr8g0380531 28.480 467 289 14 5 447 10 455 2.83e-52 182
Msa1049970 MtrunA17_Chr3g0121991 29.012 486 281 17 5 447 79 543 3.00e-52 184
Msa1049970 MtrunA17_Chr1g0207971 29.399 466 282 16 5 446 8 450 3.10e-52 182
Msa1049970 MtrunA17_Chr3g0112771 30.407 467 268 14 7 447 14 449 1.93e-51 180
Msa1049970 MtrunA17_Chr8g0365811 29.325 474 285 17 7 446 497 954 2.77e-51 186
Msa1049970 MtrunA17_Chr8g0365811 31.542 428 256 14 7 406 11 429 6.81e-49 179
Msa1049970 MtrunA17_Chr1g0161351 30.472 466 292 15 5 446 37 494 3.54e-51 180
Msa1049970 MtrunA17_Chr5g0412101 29.583 480 282 14 4 448 11 469 7.45e-51 179
Msa1049970 MtrunA17_Chr1g0207931 28.788 462 252 12 5 447 92 495 1.41e-50 179
Msa1049970 MtrunA17_Chr6g0454221 39.738 229 119 4 233 446 3 227 1.44e-49 171
Msa1049970 MtrunA17_Chr4g0032331 29.211 469 288 16 3 450 5 450 2.36e-49 174
Msa1049970 MtrunA17_Chr8g0347281 28.601 486 263 16 4 442 17 465 3.08e-49 174
Msa1049970 MtrunA17_Chr7g0243681 28.721 477 296 13 5 447 11 477 7.42e-49 174
Msa1049970 MtrunA17_Chr5g0431441 28.602 465 289 13 5 446 18 462 5.35e-48 171
Msa1049970 MtrunA17_Chr5g0401721 28.964 473 290 16 7 447 10 468 9.20e-48 171
Msa1049970 MtrunA17_Chr7g0243631 28.571 490 285 17 5 447 13 484 1.10e-47 171
Msa1049970 MtrunA17_Chr8g0377941 28.145 469 291 15 7 447 9 459 2.10e-47 169
Msa1049970 MtrunA17_Chr6g0454271 36.948 249 135 6 216 446 39 283 2.37e-47 164
Msa1049970 MtrunA17_Chr5g0423981 36.800 250 136 6 219 450 200 445 3.18e-46 166
Msa1049970 MtrunA17_Chr7g0232401 32.184 348 203 11 127 447 124 465 3.86e-46 166
Msa1049970 MtrunA17_Chr1g0207951 29.449 472 275 16 5 446 124 567 8.46e-46 170
Msa1049970 MtrunA17_Chr1g0207951 28.511 470 288 15 5 446 656 1105 1.00e-43 164
Msa1049970 MtrunA17_Chr1g0207831 29.938 481 268 18 6 446 9 460 1.40e-45 164
Msa1049970 MtrunA17_Chr5g0393591 27.133 457 283 13 3 447 15 433 3.54e-45 163
Msa1049970 MtrunA17_Chr8g0335161 32.041 387 207 14 99 445 92 462 3.95e-45 163
Msa1049970 MtrunA17_Chr8g0347271 26.931 479 280 13 4 442 18 466 1.24e-44 162
Msa1049970 MtrunA17_Chr7g0275681 27.235 481 302 16 3 447 10 478 5.07e-44 160
Msa1049970 MtrunA17_Chr7g0275511 27.105 487 281 14 4 445 14 471 1.11e-43 159
Msa1049970 MtrunA17_Chr5g0426401 34.130 293 163 10 180 447 21 308 1.32e-43 155
Msa1049970 MtrunA17_Chr6g0449931 28.721 477 285 15 5 445 6 463 2.09e-43 159
Msa1049970 MtrunA17_Chr6g0459311 27.426 474 286 18 8 445 16 467 2.99e-43 158
Msa1049970 MtrunA17_Chr6g0486251 27.447 470 291 16 8 445 9 460 4.11e-43 157
Msa1049970 MtrunA17_Chr6g0486201 27.447 470 291 16 8 445 9 460 4.11e-43 157
Msa1049970 MtrunA17_Chr4g0060511 27.143 490 295 15 5 447 11 485 1.61e-42 157
Msa1049970 MtrunA17_Chr7g0243931 26.819 481 305 13 5 447 17 488 2.19e-42 156
Msa1049970 MtrunA17_Chr7g0249961 36.052 233 133 5 228 447 28 257 2.32e-42 150
Msa1049970 MtrunA17_Chr3g0118721 36.207 232 127 6 232 446 59 286 2.67e-42 151
Msa1049970 MtrunA17_Chr7g0243771 27.292 480 300 13 5 447 6 473 2.76e-42 156
Msa1049970 MtrunA17_Chr8g0335141 28.151 476 289 19 4 445 8 464 9.79e-42 154
Msa1049970 MtrunA17_Chr8g0334851 28.536 403 235 14 78 442 75 462 3.28e-41 152
Msa1049970 MtrunA17_Chr8g0339451 30.790 367 209 13 115 445 102 459 3.93e-41 152
Msa1049970 MtrunA17_Chr7g0265041 26.626 492 310 16 1 450 7 489 4.68e-41 152
Msa1049970 MtrunA17_Chr8g0336651 29.101 378 231 8 99 445 868 1239 5.84e-41 156
Msa1049970 MtrunA17_Chr8g0336651 36.287 237 118 8 238 449 237 465 7.30e-36 141
Msa1049970 MtrunA17_Chr8g0336651 32.197 264 136 6 200 445 532 770 1.24e-35 140
Msa1049970 MtrunA17_Chr7g0232411 26.582 474 297 16 5 445 6 461 6.91e-41 152
Msa1049970 MtrunA17_Chr7g0243871 27.500 480 289 14 7 447 11 470 6.92e-41 152
Msa1049970 MtrunA17_Chr5g0431421 26.947 475 277 16 5 447 10 446 9.30e-41 151
Msa1049970 MtrunA17_Chr8g0336691 29.111 371 229 8 99 441 1006 1370 1.20e-40 155
Msa1049970 MtrunA17_Chr8g0336691 27.297 381 232 8 99 445 100 469 1.92e-38 149
Msa1049970 MtrunA17_Chr8g0336691 30.163 368 210 10 99 445 567 908 1.88e-36 143
Msa1049970 MtrunA17_Chr4g0044511 27.311 476 287 17 5 441 40 495 1.48e-40 151
Msa1049970 MtrunA17_Chr7g0243861 25.051 487 306 13 5 447 14 485 1.73e-40 151
Msa1049970 MtrunA17_Chr5g0431361 26.483 472 292 15 2 447 9 451 2.42e-40 150
Msa1049970 MtrunA17_Chr7g0243801 26.737 475 301 13 9 447 11 474 2.80e-40 150
Msa1049970 MtrunA17_Chr8g0373301 27.089 395 242 12 85 445 80 462 3.63e-40 150
Msa1049970 MtrunA17_Chr7g0243951 26.955 486 297 17 5 447 11 481 3.72e-40 150
Msa1049970 MtrunA17_Chr5g0431401 26.105 475 281 16 5 447 10 446 4.05e-40 149
Msa1049970 MtrunA17_Chr7g0232391 27.637 474 292 17 5 445 6 461 4.96e-40 149
Msa1049970 MtrunA17_Chr6g0462571 28.571 364 227 10 106 445 103 457 9.30e-40 149
Msa1049970 MtrunA17_Chr7g0243781 27.044 477 294 13 9 447 13 473 9.68e-40 149
Msa1049970 MtrunA17_Chr7g0265141 28.024 496 283 18 5 447 9 483 1.23e-39 149
Msa1049970 MtrunA17_Chr5g0429711 28.358 469 290 18 5 447 11 459 2.48e-39 147
Msa1049970 MtrunA17_Chr3g0079731 27.515 487 291 18 8 447 7 478 2.49e-39 147
Msa1049970 MtrunA17_Chr6g0462541 29.810 369 215 11 106 445 106 459 2.59e-39 147
Msa1049970 MtrunA17_Chr8g0339461 33.103 290 154 9 186 445 188 467 4.05e-39 147
Msa1049970 MtrunA17_Chr5g0440421 25.911 494 305 18 4 447 9 491 4.82e-39 147
Msa1049970 MtrunA17_Chr2g0307961 26.294 483 281 14 4 443 12 462 5.53e-39 146
Msa1049970 MtrunA17_Chr6g0462531 27.789 475 274 18 8 439 5 453 7.66e-39 146
Msa1049970 MtrunA17_Chr8g0334861 29.412 374 224 11 106 447 96 461 1.33e-38 145
Msa1049970 MtrunA17_Chr1g0153451 28.000 375 234 9 99 445 93 459 1.64e-38 145
Msa1049970 MtrunA17_Chr7g0232331 28.070 456 275 19 5 426 6 442 2.02e-38 145
Msa1049970 MtrunA17_Chr5g0431371 25.847 472 286 15 5 447 10 446 2.10e-38 144
Msa1049970 MtrunA17_Chr8g0339441 38.462 208 106 5 260 445 218 425 2.71e-38 144
Msa1049970 MtrunA17_Chr5g0442561 24.536 485 303 15 9 450 9 473 3.08e-38 144
Msa1049970 MtrunA17_Chr4g0066261 27.846 492 281 19 5 447 13 479 4.95e-38 144
Msa1049970 MtrunA17_Chr5g0442541 25.053 475 302 13 9 448 9 464 5.43e-38 144
Msa1049970 MtrunA17_Chr6g0462551 27.793 367 227 12 106 445 105 460 7.12e-38 144
Msa1049970 MtrunA17_Chr4g0044521 26.882 465 282 17 10 439 14 455 8.10e-38 143
Msa1049970 MtrunA17_Chr7g0232311 32.432 296 166 9 180 446 170 460 8.40e-38 143
Msa1049970 MtrunA17_Chr6g0454171 34.298 242 122 7 219 446 88 306 9.24e-38 139
Msa1049970 MtrunA17_Chr1g0153461 36.667 210 114 5 257 447 1 210 1.07e-37 137
Msa1049970 MtrunA17_Chr3g0106231 26.638 473 274 15 5 446 18 448 1.14e-37 143
Msa1049970 MtrunA17_Chr7g0235051 26.105 475 275 14 5 442 11 446 1.81e-37 142
Msa1049970 MtrunA17_Chr5g0442581 24.587 484 308 15 9 450 9 477 2.37e-37 143
Msa1049970 MtrunA17_Chr7g0243761 27.061 473 284 17 5 447 11 452 6.60e-37 140
Msa1049970 MtrunA17_Chr4g0066201 27.122 483 276 18 9 447 22 472 1.05e-36 140
Msa1049970 MtrunA17_Chr7g0265101 26.423 492 295 17 5 446 9 483 1.32e-36 140
Msa1049970 MtrunA17_Chr5g0442601 23.651 482 319 16 7 450 406 876 2.02e-36 142
Msa1049970 MtrunA17_Chr5g0442601 34.503 171 92 5 237 387 166 336 7.98e-24 104
Msa1049970 MtrunA17_Chr7g0265151 25.506 494 294 16 5 446 9 480 5.84e-36 138
Msa1049970 MtrunA17_Chr8g0339601 33.209 268 147 8 208 445 61 326 7.22e-36 135
Msa1049970 MtrunA17_Chr7g0232341 36.967 211 112 6 235 426 234 442 9.04e-36 137
Msa1049970 MtrunA17_Chr5g0442491 23.640 478 318 12 9 450 9 475 9.52e-36 137
Msa1049970 MtrunA17_Chr4g0066221 26.230 488 293 19 5 447 13 478 1.06e-35 137
Msa1049970 MtrunA17_Chr4g0066171 28.247 485 267 20 9 447 25 474 1.43e-35 137
Msa1049970 MtrunA17_Chr7g0265051 25.761 493 295 19 5 446 9 481 1.58e-35 137
Msa1049970 MtrunA17_Chr6g0462521 29.014 355 215 12 106 439 101 439 1.64e-35 137
Msa1049970 MtrunA17_Chr8g0366391 25.673 483 301 18 5 446 9 474 1.86e-35 137
Msa1049970 MtrunA17_Chr8g0336741 33.865 251 140 5 200 427 199 446 2.23e-35 136
Msa1049970 MtrunA17_Chr5g0419761 26.789 489 296 16 5 446 9 482 2.41e-35 137
Msa1049970 MtrunA17_Chr5g0442521 23.125 480 319 12 7 448 7 474 2.58e-35 136
Msa1049970 MtrunA17_Chr8g0336731 28.084 381 229 12 99 446 119 487 2.83e-35 137
Msa1049970 MtrunA17_Chr8g0355011 27.052 329 190 8 115 429 46 338 3.18e-35 134
Msa1049970 MtrunA17_Chr4g0066281 25.519 482 289 15 6 447 13 464 9.18e-35 135
Msa1049970 MtrunA17_Chr4g0072761 26.638 458 297 14 5 446 15 449 1.18e-34 134
Msa1049970 MtrunA17_Chr4g0066151 25.257 487 285 16 9 447 22 477 1.29e-34 134
Msa1049970 MtrunA17_Chr5g0403641 34.959 246 118 11 217 426 237 476 1.54e-34 135
Msa1049970 MtrunA17_Chr5g0419771 25.502 498 291 17 5 446 36 509 2.31e-34 134
Msa1049970 MtrunA17_Chr8g0361371 26.943 386 232 15 99 446 94 467 5.45e-34 132
Msa1049970 MtrunA17_Chr4g0072771 25.383 457 307 12 5 446 25 462 5.54e-34 132
Msa1049970 MtrunA17_Chr4g0044481 27.361 413 228 16 5 388 27 396 5.70e-34 132
Msa1049970 MtrunA17_Chr4g0066131 24.385 488 290 16 9 448 17 473 1.57e-33 131
Msa1049970 MtrunA17_Chr5g0432731 33.088 272 148 9 205 450 34 297 1.70e-33 127
Msa1049970 MtrunA17_Chr8g0339631 26.463 393 248 12 87 445 79 464 1.84e-33 131
Msa1049970 MtrunA17_Chr5g0410941 25.462 487 295 18 5 447 25 487 1.96e-33 131
Msa1049970 MtrunA17_Chr4g0011051 24.017 483 308 15 5 441 9 478 4.00e-33 130
Msa1049970 MtrunA17_Chr5g0448521 25.337 371 242 10 113 450 100 468 4.15e-33 130
Msa1049970 MtrunA17_Chr1g0159551 22.601 469 300 12 10 446 19 456 5.21e-33 130
Msa1049970 MtrunA17_Chr2g0329111 25.105 478 286 15 7 437 8 460 5.69e-33 130
Msa1049970 MtrunA17_Chr5g0429681 27.101 476 290 19 6 447 45 497 6.18e-33 130
Msa1049970 MtrunA17_Chr8g0336261 41.844 141 75 2 282 419 1 137 1.33e-32 120
Msa1049970 MtrunA17_Chr5g0442511 30.508 236 138 7 237 448 259 492 1.62e-32 129
Msa1049970 MtrunA17_Chr4g0014061 32.143 224 128 5 244 448 253 471 1.67e-32 129
Msa1049970 MtrunA17_Chr4g0029131 26.432 454 291 13 5 435 12 445 2.43e-32 130
Msa1049970 MtrunA17_Chr8g0334831 25.316 395 236 14 99 446 93 475 2.81e-32 128
Msa1049970 MtrunA17_Chr7g0243711 36.715 207 112 5 260 447 108 314 5.80e-32 124
Msa1049970 MtrunA17_Chr8g0382021 23.158 475 299 12 10 446 39 485 1.19e-31 126
Msa1049970 MtrunA17_Chr5g0401851 24.319 477 305 18 7 441 12 474 1.21e-31 126
Msa1049970 MtrunA17_Chr6g0454371 35.429 175 103 3 282 450 1 171 1.37e-31 119
Msa1049970 MtrunA17_Chr2g0294931 25.000 484 299 15 9 447 15 479 1.69e-31 126
Msa1049970 MtrunA17_Chr3g0106251 33.673 196 117 3 258 446 101 290 2.80e-31 122
Msa1049970 MtrunA17_Chr4g0044501 24.468 470 305 12 5 439 10 464 3.00e-31 125
Msa1049970 MtrunA17_Chr1g0173121 30.531 226 137 4 237 446 238 459 3.11e-31 125
Msa1049970 MtrunA17_Chr5g0428081 25.155 485 301 16 5 447 13 477 1.20e-30 123
Msa1049970 MtrunA17_Chr3g0079711 33.514 185 101 6 285 447 2 186 1.58e-30 116
Msa1049970 MtrunA17_Chr7g0218311 25.259 483 302 15 5 447 18 481 1.93e-30 123
Msa1049970 MtrunA17_Chr7g0243911 36.957 184 100 4 260 427 22 205 3.56e-30 116
Msa1049970 MtrunA17_Chr8g0367221 28.404 426 244 19 5 396 12 410 3.87e-30 124
Msa1049970 MtrunA17_Chr8g0367221 26.478 423 257 14 5 396 798 1197 1.30e-28 119
Msa1049970 MtrunA17_Chr8g0367221 25.111 450 292 13 5 427 1288 1719 3.83e-26 112
Msa1049970 MtrunA17_Chr2g0302991 32.766 235 135 6 233 447 229 460 4.15e-30 121
Msa1049970 MtrunA17_Chr6g0463891 25.105 478 310 16 7 446 14 481 5.49e-30 122
Msa1049970 MtrunA17_Chr6g0463861 25.466 483 294 18 5 446 13 470 1.08e-29 120
Msa1049970 MtrunA17_Chr6g0463851 24.898 490 299 18 5 447 13 480 1.40e-29 120
Msa1049970 MtrunA17_Chr5g0409591 35.359 181 98 4 260 421 275 455 1.68e-29 120
Msa1049970 MtrunA17_Chr7g0243851 33.816 207 118 4 260 447 234 440 3.90e-29 119
Msa1049970 MtrunA17_Chr5g0416741 23.124 493 301 14 7 447 15 481 4.17e-29 119
Msa1049970 MtrunA17_Chr7g0241781 26.234 385 235 12 5 377 9 356 4.77e-29 118
Msa1049970 MtrunA17_Chr8g0374931 25.106 470 289 18 5 443 13 450 9.74e-29 118
Msa1049970 MtrunA17_Chr8g0374901 25.567 485 293 17 8 447 15 476 1.28e-28 117
Msa1049970 MtrunA17_Chr8g0374971 25.361 485 296 17 8 447 15 478 1.35e-28 117
Msa1049970 MtrunA17_Chr1g0179901 29.832 238 138 6 238 446 253 490 1.36e-28 117
Msa1049970 MtrunA17_Chr8g0370941 31.148 244 128 7 238 444 243 483 1.71e-28 117
Msa1049970 MtrunA17_Chr7g0265111 33.333 207 118 6 260 446 306 512 2.13e-28 117
Msa1049970 MtrunA17_Chr2g0294921 25.052 479 309 17 5 446 162 627 2.20e-28 118
Msa1049970 MtrunA17_Chr8g0369341 24.842 475 310 17 5 447 7 466 4.21e-28 116
Msa1049970 MtrunA17_Chr2g0302961 30.508 236 139 6 233 447 232 463 4.51e-28 115
Msa1049970 MtrunA17_Chr1g0196851 24.675 462 292 15 5 435 49 485 5.61e-28 116
Msa1049970 MtrunA17_Chr7g0250021 28.399 331 190 12 5 313 12 317 6.64e-28 113
Msa1049970 MtrunA17_Chr7g0243811 25.250 400 243 13 17 387 1 373 6.76e-28 114
Msa1049970 MtrunA17_Chr7g0241801 24.726 457 290 15 5 448 9 424 9.46e-28 114
Msa1049970 MtrunA17_Chr4g0029151 27.682 466 270 17 5 435 20 453 1.09e-27 114
Msa1049970 MtrunA17_Chr8g0336251 25.386 453 287 12 5 426 7 439 5.03e-27 113
Msa1049970 MtrunA17_Chr8g0350881 25.247 507 273 18 6 447 13 478 6.87e-27 112
Msa1049970 MtrunA17_Chr5g0420801 24.034 466 315 14 5 447 7 456 7.60e-27 112
Msa1049970 MtrunA17_Chr8g0374941 24.729 461 286 18 8 427 14 454 8.10e-27 114
Msa1049970 MtrunA17_Chr8g0374941 30.374 214 122 6 260 447 1203 1415 1.18e-25 110
Msa1049970 MtrunA17_Chr8g0374941 24.892 462 284 15 8 427 479 919 6.94e-24 105
Msa1049970 MtrunA17_Chr8g0336321 25.386 453 287 12 5 426 7 439 1.09e-26 112
Msa1049970 MtrunA17_Chr2g0294941 34.831 178 94 4 260 416 166 342 1.51e-26 110
Msa1049970 MtrunA17_Chr7g0243611 40.000 135 75 2 260 388 136 270 1.61e-26 108
Msa1049970 MtrunA17_Chr2g0283041 26.906 446 260 22 3 415 5 417 1.07e-25 108
Msa1049970 MtrunA17_Chr8g0361411 23.789 475 297 14 5 446 8 450 3.59e-25 107
Msa1049970 MtrunA17_Chr2g0319761 27.004 474 271 18 5 439 8 445 1.57e-24 105
Msa1049970 MtrunA17_Chr4g0042931 31.579 228 133 7 237 447 240 461 3.57e-24 104
Msa1049970 MtrunA17_Chr8g0355221 25.481 416 257 13 71 447 83 484 5.33e-24 104
Msa1049970 MtrunA17_Chr4g0040711 32.609 184 114 4 262 435 261 444 7.25e-24 103
Msa1049970 MtrunA17_Chr4g0040691 33.152 184 113 4 262 435 261 444 9.00e-24 103
Msa1049970 MtrunA17_Chr1g0165701 28.906 256 154 8 218 447 228 481 1.44e-23 103
Msa1049970 MtrunA17_Chr1g0207881 38.060 134 76 3 320 446 248 381 3.54e-23 100
Msa1049970 MtrunA17_Chr4g0042891 30.702 228 131 5 237 447 246 463 4.23e-23 101
Msa1049970 MtrunA17_Chr7g0232351 38.514 148 72 5 235 366 234 378 4.95e-23 100
Msa1049970 MtrunA17_Chr6g0482061 30.000 260 155 8 191 428 204 458 6.95e-23 100
Msa1049970 MtrunA17_Chr2g0319751 25.771 454 288 14 5 433 485 914 4.11e-22 99.8
Msa1049970 MtrunA17_Chr2g0319751 23.904 456 279 19 5 435 8 420 5.16e-14 74.7
Msa1049970 MtrunA17_Chr6g0454231 27.982 218 107 6 233 439 29 207 6.88e-22 97.8
Msa1049970 MtrunA17_Chr6g0454231 28.659 164 108 2 4 163 249 407 1.98e-15 78.2
Msa1049970 MtrunA17_Chr5g0431431 26.619 417 212 17 5 409 10 344 7.77e-22 96.7
Msa1049970 MtrunA17_Chr8g0337381 36.585 123 76 2 328 448 3 125 8.06e-22 90.9
Msa1049970 MtrunA17_Chr5g0416821 21.971 487 303 15 7 447 16 471 3.43e-21 95.9
Msa1049970 MtrunA17_Chr2g0278721 24.062 453 297 13 5 427 517 952 4.30e-21 96.7
Msa1049970 MtrunA17_Chr2g0278721 24.444 450 290 14 5 427 15 441 7.57e-19 89.7
Msa1049970 MtrunA17_Chr4g0029161 25.333 450 273 15 5 435 12 417 4.43e-21 95.1
Msa1049970 MtrunA17_Chr2g0319791 26.940 464 279 21 5 435 8 444 1.78e-20 93.6
Msa1049970 MtrunA17_Chr5g0427571 29.915 234 134 7 217 426 46 273 3.10e-20 90.9
Msa1049970 MtrunA17_Chr8g0357361 35.211 142 87 4 260 397 118 258 3.79e-20 90.1
Msa1049970 MtrunA17_Chr5g0426411 30.952 168 108 3 4 168 11 173 5.47e-19 84.3
Msa1049970 MtrunA17_Chr6g0454281 32.143 168 102 3 4 164 9 171 5.51e-19 85.5
Msa1049970 MtrunA17_Chr2g0278741 23.661 448 296 12 5 427 97 523 6.86e-19 89.4
Msa1049970 MtrunA17_Chr3g0092031 33.125 160 99 5 262 416 6 162 1.20e-18 84.0
Msa1049970 MtrunA17_Chr4g0069611 31.646 158 104 3 262 416 269 425 4.64e-18 86.3
Msa1049970 MtrunA17_Chr6g0466841 22.069 435 292 11 5 416 18 428 6.00e-18 85.9
Msa1049970 MtrunA17_Chr6g0466831 22.126 461 310 13 5 444 18 450 9.19e-18 85.5
Msa1049970 MtrunA17_Chr2g0319731 25.597 461 284 18 5 435 25 456 9.28e-18 85.5
Msa1049970 MtrunA17_Chr4g0066141 34.307 137 76 3 325 447 213 349 2.16e-17 83.6
Msa1049970 MtrunA17_Chr2g0319801 25.216 464 282 15 5 435 8 439 2.61e-17 84.0
Msa1049970 MtrunA17_Chr7g0243731 46.575 73 38 1 325 396 6 78 4.20e-17 75.9
Msa1049970 MtrunA17_Chr7g0231631 26.054 261 149 8 217 447 11 257 4.77e-17 81.3
Msa1049970 MtrunA17_Chr2g0302851 23.202 431 292 12 5 416 16 426 1.72e-16 81.6
Msa1049970 MtrunA17_Chr2g0321331 32.222 180 94 7 267 435 91 253 6.07e-16 77.8
Msa1049970 MtrunA17_Chr6g0464091 36.232 138 81 4 262 395 279 413 1.18e-15 79.0
Msa1049970 MtrunA17_Chr4g0039881 31.646 158 104 3 262 416 246 402 3.01e-15 77.4
Msa1049970 MtrunA17_Chr6g0453981 43.011 93 45 2 223 307 113 205 4.67e-15 74.3
Msa1049970 MtrunA17_Chr8g0336271 27.778 162 109 2 5 163 10 166 3.39e-14 72.8
Msa1049970 MtrunA17_Chr8g0334841 43.011 93 49 2 233 325 64 152 3.45e-13 67.8
Msa1049970 MtrunA17_Chr6g0454391 42.029 69 36 1 341 409 11 75 7.78e-12 62.4
Msa1049970 MtrunA17_Chr6g0453941 51.724 58 28 0 250 307 201 258 3.02e-11 63.9
Msa1049970 MtrunA17_Chr3g0118741 46.552 58 26 1 4 61 5 57 3.61e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1049970 AT3G02100.1 41.075 465 242 9 1 448 9 458 2.50e-124 369
Msa1049970 AT1G22340.1 31.866 477 283 14 4 447 12 479 6.99e-75 243
Msa1049970 AT1G22400.1 31.435 474 285 11 4 448 12 474 2.02e-73 239
Msa1049970 AT1G78270.1 32.558 473 280 13 4 448 12 473 5.54e-73 238
Msa1049970 AT1G22360.1 32.000 475 282 12 5 447 10 475 7.71e-72 234
Msa1049970 AT1G22380.1 31.513 476 285 13 4 447 12 478 1.07e-71 234
Msa1049970 AT1G22370.2 32.126 414 253 7 4 394 12 420 9.04e-70 229
Msa1049970 AT1G22360.2 32.258 465 278 10 5 437 10 469 5.91e-68 224
Msa1049970 AT3G22250.1 28.009 457 280 9 4 431 7 443 7.95e-65 216
Msa1049970 AT5G59590.1 30.217 460 282 13 5 447 10 447 3.61e-63 211
Msa1049970 AT3G46670.1 29.437 462 281 13 7 448 11 447 1.64e-60 204
Msa1049970 AT3G21560.1 30.271 479 280 14 4 447 11 470 2.03e-60 205
Msa1049970 AT5G59580.1 29.565 460 284 14 5 447 9 445 4.11e-60 203
Msa1049970 AT1G05675.1 29.614 466 284 12 5 447 6 450 7.81e-60 202
Msa1049970 AT3G46660.1 28.665 457 293 11 7 448 16 454 1.18e-59 202
Msa1049970 AT3G55700.1 31.330 466 272 16 5 447 8 448 3.38e-59 201
Msa1049970 AT1G05680.1 29.936 471 276 14 5 447 6 450 4.76e-59 200
Msa1049970 AT3G11340.1 29.614 466 281 12 4 450 8 445 6.30e-59 200
Msa1049970 AT2G31750.1 29.526 464 281 10 7 446 10 451 7.41e-57 194
Msa1049970 AT2G31750.2 29.526 464 281 10 7 446 10 451 1.93e-56 194
Msa1049970 AT3G46700.1 27.948 458 289 12 5 446 9 441 3.78e-56 192
Msa1049970 AT4G15550.1 28.306 484 289 18 4 450 12 474 1.38e-55 192
Msa1049970 AT5G05880.1 28.755 466 280 14 7 448 10 447 1.64e-55 191
Msa1049970 AT3G46690.1 29.004 462 289 14 5 447 9 450 5.95e-55 189
Msa1049970 AT5G38040.1 29.913 458 266 15 15 447 20 447 1.35e-54 188
Msa1049970 AT5G05900.1 28.478 460 288 11 7 448 10 446 1.50e-54 188
Msa1049970 AT3G46680.1 29.957 464 279 16 5 447 9 447 1.69e-54 188
Msa1049970 AT2G43840.1 29.424 469 274 16 5 447 7 444 6.61e-54 187
Msa1049970 AT2G43840.2 29.211 469 275 16 5 447 7 444 8.86e-54 186
Msa1049970 AT3G55710.1 30.556 468 281 15 3 447 6 452 9.83e-54 186
Msa1049970 AT5G38010.1 28.632 475 274 13 5 447 10 451 9.87e-54 186
Msa1049970 AT4G15480.1 28.112 466 304 13 5 447 19 476 1.74e-52 184
Msa1049970 AT4G15500.1 28.986 483 276 17 3 447 7 460 2.11e-52 183
Msa1049970 AT3G46650.1 27.451 459 285 11 5 450 10 433 2.56e-52 182
Msa1049970 AT2G23260.1 28.782 476 272 17 5 447 10 451 3.55e-52 182
Msa1049970 AT4G15490.1 28.511 470 296 18 5 447 8 464 1.03e-51 181
Msa1049970 AT5G05860.1 28.322 459 287 12 7 447 11 445 1.30e-51 181
Msa1049970 AT3G46720.1 30.531 452 270 15 5 441 9 431 2.92e-51 179
Msa1049970 AT1G05560.1 26.261 476 293 14 1 446 1 448 3.04e-51 180
Msa1049970 AT1G05560.2 26.261 476 293 14 1 446 51 498 5.71e-51 180
Msa1049970 AT2G36970.1 27.941 476 295 13 4 447 9 468 6.97e-51 179
Msa1049970 AT4G14090.1 27.766 461 297 12 4 447 12 453 1.15e-50 178
Msa1049970 AT2G30140.2 28.480 467 279 15 5 447 13 448 1.71e-50 177
Msa1049970 AT2G26480.1 27.660 470 281 16 7 450 10 446 3.21e-50 177
Msa1049970 AT2G30140.1 28.358 469 278 16 5 447 13 449 5.06e-50 176
Msa1049970 AT2G23250.1 28.132 455 276 13 15 447 8 433 2.03e-49 174
Msa1049970 AT2G43820.1 27.848 474 275 16 5 447 7 444 4.71e-48 171
Msa1049970 AT2G31790.1 27.742 465 294 11 5 446 8 453 9.15e-48 170
Msa1049970 AT5G05890.1 28.571 469 285 15 5 448 8 451 1.85e-47 169
Msa1049970 AT5G05870.1 26.247 461 306 11 5 447 8 452 2.29e-47 169
Msa1049970 AT1G05530.1 26.489 487 281 15 1 446 1 451 6.23e-47 168
Msa1049970 AT2G28080.1 26.464 461 304 14 9 447 22 469 1.15e-46 168
Msa1049970 AT2G30150.2 27.021 470 290 17 1 446 9 449 2.16e-45 164
Msa1049970 AT2G15490.1 29.132 484 277 18 5 441 7 471 6.42e-45 163
Msa1049970 AT1G01420.1 28.692 474 282 17 4 442 7 459 3.63e-44 161
Msa1049970 AT1G01420.2 28.692 474 282 17 4 442 10 462 3.67e-44 161
Msa1049970 AT3G16520.3 28.954 373 232 12 100 449 98 460 5.36e-44 160
Msa1049970 AT2G36800.1 28.074 488 289 16 5 446 12 483 6.05e-44 161
Msa1049970 AT2G15490.3 29.167 480 279 18 5 441 7 468 8.04e-44 160
Msa1049970 AT2G15480.1 29.051 506 257 21 5 446 10 477 9.36e-44 160
Msa1049970 AT1G22370.1 35.391 243 136 5 173 394 8 250 1.59e-43 155
Msa1049970 AT2G30150.1 27.056 462 284 17 9 446 1 433 5.00e-43 157
Msa1049970 AT3G16520.2 29.598 348 213 11 100 425 98 435 1.35e-42 156
Msa1049970 AT3G16520.1 30.029 343 218 10 100 425 98 435 1.84e-42 156
Msa1049970 AT2G15480.2 29.216 510 250 22 5 441 10 481 9.26e-42 155
Msa1049970 AT2G29740.1 27.389 471 308 14 5 447 8 472 1.32e-41 154
Msa1049970 AT2G36760.1 26.626 492 280 16 5 441 14 479 1.33e-41 154
Msa1049970 AT2G36770.1 27.329 483 288 19 5 441 14 479 2.02e-41 154
Msa1049970 AT3G53160.1 26.789 489 279 19 5 439 8 471 2.34e-41 154
Msa1049970 AT1G24100.1 25.000 480 287 16 5 446 11 455 5.20e-41 152
Msa1049970 AT2G36780.1 26.585 489 284 16 5 441 14 479 2.58e-40 151
Msa1049970 AT4G01070.1 26.226 469 301 14 4 442 7 460 4.17e-40 150
Msa1049970 AT3G21790.1 25.462 487 305 13 5 447 4 476 1.44e-39 149
Msa1049970 AT1G07250.1 25.957 470 312 12 6 446 7 469 2.57e-39 148
Msa1049970 AT2G36790.1 27.273 484 297 14 5 446 13 483 7.94e-39 147
Msa1049970 AT4G34131.1 26.411 496 282 15 5 446 10 476 8.93e-39 146
Msa1049970 AT4G34138.1 26.078 487 291 17 1 438 1 467 1.28e-38 146
Msa1049970 AT3G21750.1 24.217 479 311 14 5 447 4 466 2.69e-38 145
Msa1049970 AT3G21780.1 26.371 474 307 11 5 447 4 466 6.24e-38 144
Msa1049970 AT4G36770.1 28.879 464 260 21 5 427 4 438 1.16e-37 143
Msa1049970 AT2G36750.1 27.143 490 289 16 5 446 10 479 1.28e-37 143
Msa1049970 AT1G01390.2 28.298 470 290 17 4 442 24 477 2.25e-37 143
Msa1049970 AT1G01390.1 28.723 470 288 18 4 442 7 460 2.87e-37 142
Msa1049970 AT3G21760.1 25.934 482 311 12 5 447 4 478 4.06e-37 142
Msa1049970 AT4G15260.1 25.287 348 230 6 128 447 7 352 9.54e-37 138
Msa1049970 AT2G29750.1 26.569 478 302 14 5 447 8 471 1.16e-36 140
Msa1049970 AT4G15280.1 23.222 478 322 12 5 447 4 471 1.26e-36 140
Msa1049970 AT3G21800.1 22.547 479 323 9 6 447 6 473 1.85e-36 140
Msa1049970 AT4G15280.2 23.222 478 322 12 5 447 36 503 2.01e-36 140
Msa1049970 AT5G17050.1 24.672 458 315 12 5 447 12 454 3.34e-36 139
Msa1049970 AT5G12890.1 26.923 494 292 18 5 450 10 482 3.74e-36 139
Msa1049970 AT4G34135.1 25.813 461 259 15 5 412 11 441 1.44e-34 135
Msa1049970 AT1G07260.1 23.241 469 329 11 5 447 6 469 2.40e-34 134
Msa1049970 AT3G53150.1 24.158 505 302 12 5 447 22 507 5.65e-34 134
Msa1049970 AT2G29730.1 25.527 474 302 18 5 446 5 459 6.09e-34 133
Msa1049970 AT3G50740.1 34.434 212 113 5 237 427 241 447 5.53e-33 130
Msa1049970 AT5G26310.1 27.389 471 259 20 4 427 6 440 6.28e-33 130
Msa1049970 AT5G37950.2 27.322 366 218 9 20 366 1 337 3.83e-32 125
Msa1049970 AT5G37950.1 27.273 363 228 9 20 366 1 343 4.33e-32 125
Msa1049970 AT2G16890.2 25.773 485 280 18 5 442 9 460 4.43e-32 127
Msa1049970 AT5G17040.1 23.810 462 318 11 1 450 1 440 7.25e-32 126
Msa1049970 AT1G10400.1 26.004 473 301 17 5 447 7 460 8.43e-32 127
Msa1049970 AT5G66690.1 25.532 470 269 16 4 427 6 440 1.25e-31 126
Msa1049970 AT1G07240.1 23.395 483 322 16 1 446 1 472 2.12e-31 126
Msa1049970 AT1G51210.1 25.221 452 272 17 4 427 19 432 1.17e-30 123
Msa1049970 AT2G18560.1 33.171 205 114 6 237 425 150 347 1.56e-30 122
Msa1049970 AT2G18570.1 24.565 460 289 15 1 425 1 437 1.58e-30 123
Msa1049970 AT5G03490.1 23.849 478 293 15 4 446 18 459 2.88e-30 122
Msa1049970 AT5G17040.2 30.493 223 143 5 234 450 122 338 2.98e-30 120
Msa1049970 AT1G73880.1 25.051 491 280 16 5 447 14 464 5.73e-30 122
Msa1049970 AT5G14860.1 23.789 475 297 14 5 441 8 455 7.65e-30 121
Msa1049970 AT2G16890.3 25.612 449 258 16 5 410 9 424 8.64e-30 120
Msa1049970 AT2G29710.1 23.241 469 319 15 6 447 6 460 9.16e-30 121
Msa1049970 AT5G17030.1 24.301 465 307 17 5 447 12 453 1.30e-29 120
Msa1049970 AT1G30530.1 23.620 453 307 14 11 447 19 448 1.31e-29 120
Msa1049970 AT5G49690.1 24.211 475 296 16 5 447 10 452 2.85e-29 119
Msa1049970 AT2G22930.1 25.339 442 281 16 5 426 6 418 3.32e-28 116
Msa1049970 AT1G64910.1 25.107 466 297 17 5 447 6 442 8.69e-28 115
Msa1049970 AT5G53990.1 24.204 471 295 18 5 447 6 442 3.68e-27 113
Msa1049970 AT4G27560.1 24.700 417 271 13 5 404 7 397 7.03e-27 112
Msa1049970 AT5G65550.1 22.348 443 292 17 5 418 9 428 1.36e-26 112
Msa1049970 AT1G64920.1 24.359 468 302 16 5 447 6 446 1.74e-25 108
Msa1049970 AT4G27570.1 24.000 425 280 12 5 412 7 405 3.29e-25 107
Msa1049970 AT5G54010.1 24.101 473 292 17 5 447 6 441 2.01e-24 105
Msa1049970 AT3G29630.1 24.681 470 290 16 5 447 6 438 5.86e-22 98.2
Msa1049970 AT1G50580.1 26.030 461 283 17 5 440 6 433 6.87e-22 98.2
Msa1049970 AT4G09500.2 22.894 463 304 18 5 447 6 435 2.07e-21 96.7
Msa1049970 AT1G06000.1 29.329 283 169 12 189 446 154 430 6.01e-21 95.1
Msa1049970 AT3G29630.2 24.229 454 286 14 5 447 6 412 2.99e-20 93.2
Msa1049970 AT2G22590.1 23.377 462 284 19 5 427 15 445 5.22e-20 92.8
Msa1049970 AT4G09500.1 29.592 196 124 6 262 447 219 410 7.29e-20 91.7
Msa1049970 AT5G54060.1 24.573 468 306 18 7 446 15 463 5.38e-18 86.7
Msa1049970 AT2G23210.1 22.973 296 172 13 5 275 10 274 6.23e-11 63.5

Find 100 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATTGTTACCTTCAATA+TGG 0.223301 7_2:-13699383 Msa1049970:CDS
CTAAGGCTAATTCTTTAAAT+TGG 0.229806 7_2:+13697016 None:intergenic
GAATTAGACAAGGATGAAAA+TGG 0.235869 7_2:-13696703 Msa1049970:CDS
ACTCCATCATCAATTAGTTT+AGG 0.236606 7_2:+13699268 None:intergenic
CTCCATCATCAATTAGTTTA+GGG 0.245474 7_2:+13699269 None:intergenic
TGGTAGGAACTTTGGTGATA+TGG 0.260975 7_2:+13697182 None:intergenic
CTAATTCTTTAAATTGGTTT+TGG 0.262998 7_2:+13697022 None:intergenic
AATAATAATATTTCTATTGT+TGG 0.266027 7_2:-13699589 Msa1049970:CDS
GAGCTGAATTTCTTGATCTT+TGG 0.276157 7_2:+13697359 None:intergenic
GGACAAAGCTTAGGAATTAA+AGG 0.285150 7_2:-13699343 Msa1049970:CDS
GTGTCCATCTTTGGCATGTT+TGG 0.296220 7_2:+13697333 None:intergenic
CTAAAGGCAAGATCGTTAAT+TGG 0.299082 7_2:-13696900 Msa1049970:CDS
CCACCAATGTCCTAACTTCA+TGG 0.310232 7_2:+13697245 None:intergenic
GACTAGCTCAGCAACTTCTT+TGG 0.311316 7_2:-13699308 Msa1049970:CDS
AGAAATATTATTATTGTTGT+TGG 0.325606 7_2:+13699597 None:intergenic
CTTCAATATGGGATGGGCTT+TGG 0.339287 7_2:-13699371 Msa1049970:CDS
ACCAGAATATACACCTTCTA+TGG 0.339651 7_2:+13696807 None:intergenic
TGTCACTCTCCCAGATGGTT+TGG 0.346460 7_2:-13699530 Msa1049970:CDS
AATAGAAGATGTTAATGCTT+TGG 0.376579 7_2:-13699428 Msa1049970:CDS
CTGGTAAACCTTTCTTGTGT+TGG 0.383314 7_2:-13696789 Msa1049970:CDS
TCTTCATCCTCCAAACCATC+TGG 0.387687 7_2:+13699520 None:intergenic
ACCATAGAAGGTGTATATTC+TGG 0.392168 7_2:-13696808 Msa1049970:CDS
AGTGATCTTGCAGCCATGTT+TGG 0.392435 7_2:+13699651 None:intergenic
TTGGATAACATAGTAGAAAA+TGG 0.393196 7_2:-13696586 Msa1049970:CDS
GATTTATATGACCTGGGATT+GGG 0.397267 7_2:+13699701 None:intergenic
ATTATTGTTACCTTCAATAT+GGG 0.398070 7_2:-13699382 Msa1049970:CDS
GGTTGGAATTCTACCATAGA+AGG 0.402078 7_2:-13696820 Msa1049970:CDS
ATATGTTTCCTTCGGTAGTT+TGG 0.403181 7_2:-13697055 Msa1049970:CDS
CTTCGGTAGTTTGGCAGTAA+TGG 0.405126 7_2:-13697046 Msa1049970:CDS
TTGAGAAAATAACTTTCCTT+TGG 0.407054 7_2:+13699485 None:intergenic
AAGACATGACTTCCTTAGAT+TGG 0.418488 7_2:-13697107 Msa1049970:CDS
GGATTTATATGACCTGGGAT+TGG 0.419130 7_2:+13699700 None:intergenic
TTAGTTCCAAGGAATTCATC+AGG 0.421180 7_2:+13696919 None:intergenic
ATGGGATGGGCTTTGGAAGT+TGG 0.427573 7_2:-13699364 Msa1049970:CDS
TTAACATCTTCTATTAGCTT+AGG 0.429956 7_2:+13699436 None:intergenic
ACAGCAACAAAAGTTCATTC+TGG 0.432292 7_2:-13697134 Msa1049970:CDS
CACTCTCCCAGATGGTTTGG+AGG 0.434890 7_2:-13699527 Msa1049970:CDS
GAGATGCAAACCATGAAGTT+AGG 0.437422 7_2:-13697255 Msa1049970:CDS
TTGGAAGTTGGACAAAGCTT+AGG 0.440936 7_2:-13699352 Msa1049970:CDS
TCCATCATCAATGGGCCAAT+TGG 0.441886 7_2:+13697162 None:intergenic
CAATTTAAAGAATTAGCCTT+AGG 0.449998 7_2:-13697015 Msa1049970:CDS
ATTTGTGATGTGTGGAAGGT+TGG 0.452190 7_2:-13696730 Msa1049970:CDS
GGGCCAATTGGTAGGAACTT+TGG 0.452202 7_2:+13697174 None:intergenic
CTCTCCAAACATGCCAAAGA+TGG 0.458363 7_2:-13697337 Msa1049970:CDS
TAAAGGCAAGATCGTTAATT+GGG 0.466925 7_2:-13696899 Msa1049970:CDS
TTGCTTATCTAGCCAATCTA+AGG 0.467824 7_2:+13697095 None:intergenic
GCATACCCTGATGAATTCCT+TGG 0.468516 7_2:-13696925 Msa1049970:CDS
ATAAATTGATCAGTTGCAAA+TGG 0.468563 7_2:+13696766 None:intergenic
TCACCAAAGTTCCTACCAAT+TGG 0.471332 7_2:-13697177 Msa1049970:CDS
TGTGGCTGAATTCTGTGTTA+AGG 0.472295 7_2:+13699626 None:intergenic
GTTTCATTAGTCATTGTGGT+TGG 0.474452 7_2:-13696837 Msa1049970:CDS
ACCAATTGGCCCATTGATGA+TGG 0.475756 7_2:-13697163 Msa1049970:CDS
AATTAGACAAGGATGAAAAT+GGG 0.477251 7_2:-13696702 Msa1049970:CDS
ATATGACCTGGGATTGGGTA+TGG 0.477526 7_2:+13699706 None:intergenic
TCCAAAGAAAAGGCTTGTTA+AGG 0.478158 7_2:+13696983 None:intergenic
GCAAATGGCCAACACAAGAA+AGG 0.481754 7_2:+13696781 None:intergenic
CGATCTTGCCTTTAGTTCCA+AGG 0.484646 7_2:+13696908 None:intergenic
GATGAATTCCTTGGAACTAA+AGG 0.486930 7_2:-13696916 Msa1049970:CDS
AAAAGAAGAGATAAAGAAGA+AGG 0.488960 7_2:-13696671 Msa1049970:CDS
GGACGAACAATCCAAAGAAA+AGG 0.490004 7_2:+13696973 None:intergenic
AGAAAGATCATTGAAACTAA+AGG 0.497391 7_2:-13696617 Msa1049970:CDS
TGTTACCTTCAATATGGGAT+GGG 0.503672 7_2:-13699377 Msa1049970:CDS
TTGTTACCTTCAATATGGGA+TGG 0.510585 7_2:-13699378 Msa1049970:CDS
GCTTGTTTCATTAGTCATTG+TGG 0.513693 7_2:-13696841 Msa1049970:CDS
ATGAGGGGATTTATATGACC+TGG 0.518532 7_2:+13699694 None:intergenic
AGAAGAGATAAAGAAGAAGG+TGG 0.522824 7_2:-13696668 Msa1049970:CDS
TCTGTCGTATATGTTTCCTT+CGG 0.524672 7_2:-13697063 Msa1049970:CDS
ATCAAATACGATCTTGTCAA+AGG 0.528049 7_2:+13697290 None:intergenic
ATCCCTAAACTAATTGATGA+TGG 0.529148 7_2:-13699271 Msa1049970:CDS
CAAAGCCCATCCCATATTGA+AGG 0.533037 7_2:+13699372 None:intergenic
TTTACCTTGTTGTCATTACT+CGG 0.537253 7_2:+13696952 None:intergenic
CTTCATCCTCCAAACCATCT+GGG 0.544700 7_2:+13699521 None:intergenic
CTAATGAAACAAGCTATAGC+AGG 0.547241 7_2:+13696850 None:intergenic
AACTTTGTCACTCTCCCAGA+TGG 0.551842 7_2:-13699535 Msa1049970:CDS
GAAACATATACGACAGAATG+AGG 0.551900 7_2:+13697069 None:intergenic
TCTATTAGCTTAGGAAGCAA+AGG 0.556044 7_2:+13699445 None:intergenic
CCATGAAGTTAGGACATTGG+TGG 0.558698 7_2:-13697245 Msa1049970:CDS
GTCATTCCATACCCAATCCC+AGG 0.558824 7_2:-13699712 Msa1049970:CDS
GAAACTAAAGGAGTTAACAT+TGG 0.559214 7_2:-13696605 Msa1049970:CDS
AACATGACATAATTGCATGA+GGG 0.580442 7_2:+13699678 None:intergenic
ATCTTGTCAAAGGTCCGCCA+TGG 0.592117 7_2:+13697300 None:intergenic
TCATCAATGGGCCAATTGGT+AGG 0.594029 7_2:+13697166 None:intergenic
TGAGGGGATTTATATGACCT+GGG 0.594731 7_2:+13699695 None:intergenic
AAACATGACATAATTGCATG+AGG 0.596705 7_2:+13699677 None:intergenic
GTTAAGGAGATCAAGTCCTA+AGG 0.597997 7_2:+13696999 None:intergenic
TAGTTCCAAGGAATTCATCA+GGG 0.601310 7_2:+13696920 None:intergenic
ACATGACATAATTGCATGAG+GGG 0.606077 7_2:+13699679 None:intergenic
GATGGAGTAATTGATTCAGC+AGG 0.610610 7_2:-13699253 Msa1049970:intron
ATATATTTGTGATGTGTGGA+AGG 0.614853 7_2:-13696734 Msa1049970:CDS
AGTCATATATTTGTGATGTG+TGG 0.621801 7_2:-13696738 Msa1049970:CDS
AAACCATGAAGTTAGGACAT+TGG 0.627911 7_2:-13697248 Msa1049970:CDS
GGTTGGATTTGAATTAGACA+AGG 0.633037 7_2:-13696713 Msa1049970:CDS
ATTAGCTTAGGAAGCAAAGG+AGG 0.637521 7_2:+13699448 None:intergenic
ATGGAATGACAAGAAAGTGA+GGG 0.641476 7_2:+13699725 None:intergenic
TATGGAATGACAAGAAAGTG+AGG 0.642099 7_2:+13699724 None:intergenic
TGAAACAAGCTATAGCAGGA+TGG 0.655376 7_2:+13696854 None:intergenic
CATTACTGCCAAACTACCGA+AGG 0.660154 7_2:+13697047 None:intergenic
AAGACAACAGAAGTGACCAA+AGG 0.664139 7_2:-13699501 Msa1049970:CDS
ACATATACGACAGAATGAGG+TGG 0.716919 7_2:+13697072 None:intergenic
TCGTCCGAGTAATGACAACA+AGG 0.724446 7_2:-13696956 Msa1049970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATAATATTTCTATTGT+TGG - chr7_2:13696684-13696703 Msa1049970:CDS 10.0%
!! AAATCAAGAATAAATAAATA+AGG + chr7_2:13697917-13697936 None:intergenic 10.0%
!! AACTAATTAATTAAAGATTA+TGG - chr7_2:13698012-13698031 Msa1049970:intron 10.0%
!! ACTAATTAATTAAAGATTAT+GGG - chr7_2:13698013-13698032 Msa1049970:intron 10.0%
!!! CTATATATATTGATTTAAAA+CGG - chr7_2:13698412-13698431 Msa1049970:intron 10.0%
!! AGAAATATTATTATTGTTGT+TGG + chr7_2:13696679-13696698 None:intergenic 15.0%
!!! TTTTCTTTGTTTTGTTTTAT+TGG - chr7_2:13697056-13697075 Msa1049970:CDS 15.0%
!! GTTTGTATATATGATTAAAT+GGG + chr7_2:13697291-13697310 None:intergenic 15.0%
!! AGTTTGTATATATGATTAAA+TGG + chr7_2:13697292-13697311 None:intergenic 15.0%
!! TTAATATTGAAACTCATTTA+GGG + chr7_2:13697518-13697537 None:intergenic 15.0%
!! ATTAATATTGAAACTCATTT+AGG + chr7_2:13697519-13697538 None:intergenic 15.0%
!!! TGATTTAATTTATCTATTAC+AGG - chr7_2:13698883-13698902 Msa1049970:intron 15.0%
!!! TTATTGTTTCTTCATTTTTG+AGG + chr7_2:13696719-13696738 None:intergenic 20.0%
!! TATTATTGTTACCTTCAATA+TGG - chr7_2:13696890-13696909 Msa1049970:CDS 20.0%
!! ATTATTGTTACCTTCAATAT+GGG - chr7_2:13696891-13696910 Msa1049970:CDS 20.0%
!! ACTAACAAATTAACGATTAA+CGG + chr7_2:13697542-13697561 None:intergenic 20.0%
!! TGACAATATTAAAATAACCA+CGG - chr7_2:13697680-13697699 Msa1049970:intron 20.0%
!!! TAATTAACCTTGTTTGATTT+TGG - chr7_2:13698298-13698317 Msa1049970:intron 20.0%
!! AATATATATAGCCTAAAACA+TGG + chr7_2:13698403-13698422 None:intergenic 20.0%
!!! CTAATTCTTTAAATTGGTTT+TGG + chr7_2:13699254-13699273 None:intergenic 20.0%
!! ATCTCAAAAACTTTATCAAT+TGG - chr7_2:13699724-13699743 Msa1049970:CDS 20.0%
!! TCTCAAAAACTTTATCAATT+GGG - chr7_2:13699725-13699744 Msa1049970:CDS 20.0%
! TTGAGAAAATAACTTTCCTT+TGG + chr7_2:13696791-13696810 None:intergenic 25.0%
!! TTAACATCTTCTATTAGCTT+AGG + chr7_2:13696840-13696859 None:intergenic 25.0%
! AATAGAAGATGTTAATGCTT+TGG - chr7_2:13696845-13696864 Msa1049970:CDS 25.0%
!!! GAATTAAAGGTGTTTTTCTT+TGG - chr7_2:13696943-13696962 Msa1049970:CDS 25.0%
!!! ATTTTTGGAAATAGTCAAAG+TGG + chr7_2:13697113-13697132 None:intergenic 25.0%
!!! TTTTTTTTAAAACTCGGTTC+CGG - chr7_2:13697213-13697232 Msa1049970:CDS 25.0%
!!! AAAATAAAATGTTGGCTTTG+TGG + chr7_2:13697628-13697647 None:intergenic 25.0%
! GACAATATTAAAATAACCAC+GGG - chr7_2:13697681-13697700 Msa1049970:intron 25.0%
! ACAATATTAAAATAACCACG+GGG - chr7_2:13697682-13697701 Msa1049970:intron 25.0%
!!! TTTTCCTCAAGTTTTTTCTT+AGG - chr7_2:13697884-13697903 Msa1049970:intron 25.0%
!! TAAAATGTTTCTAACCACAA+TGG + chr7_2:13698151-13698170 None:intergenic 25.0%
! ATTTCAACCAAAATCAAACA+AGG + chr7_2:13698308-13698327 None:intergenic 25.0%
!!! TGTTTGATTTTGGTTGAAAT+CGG - chr7_2:13698308-13698327 Msa1049970:intron 25.0%
! TCAATGCTGCAAATATATTA+AGG - chr7_2:13698465-13698484 Msa1049970:intron 25.0%
! GAGAGAAAAATATTTATAGC+AGG + chr7_2:13698759-13698778 None:intergenic 25.0%
! GTTAGTAGTTAATTCGTTAT+GGG + chr7_2:13698781-13698800 None:intergenic 25.0%
! TGTTAGTAGTTAATTCGTTA+TGG + chr7_2:13698782-13698801 None:intergenic 25.0%
! CTAAGGCTAATTCTTTAAAT+TGG + chr7_2:13699260-13699279 None:intergenic 25.0%
!!! CAATTTAAAGAATTAGCCTT+AGG - chr7_2:13699258-13699277 Msa1049970:CDS 25.0%
!!! TGGTTCAATATCTTTTTTTG+CGG + chr7_2:13699402-13699421 None:intergenic 25.0%
! ATAAATTGATCAGTTGCAAA+TGG + chr7_2:13699510-13699529 None:intergenic 25.0%
! AATTAGACAAGGATGAAAAT+GGG - chr7_2:13699571-13699590 Msa1049970:CDS 25.0%
! AAAAGAAGAGATAAAGAAGA+AGG - chr7_2:13699602-13699621 Msa1049970:CDS 25.0%
! AGAAAGATCATTGAAACTAA+AGG - chr7_2:13699656-13699675 Msa1049970:CDS 25.0%
! TTGGATAACATAGTAGAAAA+TGG - chr7_2:13699687-13699706 Msa1049970:CDS 25.0%
AACATGACATAATTGCATGA+GGG + chr7_2:13696598-13696617 None:intergenic 30.0%
AAACATGACATAATTGCATG+AGG + chr7_2:13696599-13696618 None:intergenic 30.0%
!!! TGTCATGTTTTAACCAAACA+TGG - chr7_2:13696609-13696628 Msa1049970:CDS 30.0%
!!! TATTGTTGTTGGTTCTTTTG+TGG + chr7_2:13696668-13696687 None:intergenic 30.0%
ATCCCTAAACTAATTGATGA+TGG - chr7_2:13697002-13697021 Msa1049970:CDS 30.0%
! CTCCATCATCAATTAGTTTA+GGG + chr7_2:13697007-13697026 None:intergenic 30.0%
! ACTCCATCATCAATTAGTTT+AGG + chr7_2:13697008-13697027 None:intergenic 30.0%
!! CAGCAGACAGATTTAATTTT+TGG + chr7_2:13697128-13697147 None:intergenic 30.0%
TTATACATCTGGGTAAAGTT+TGG - chr7_2:13697153-13697172 Msa1049970:CDS 30.0%
AAAGTCAGAAACTAACAACT+AGG - chr7_2:13697433-13697452 Msa1049970:intron 30.0%
! TATTGAAACTCATTTAGGGT+TGG + chr7_2:13697514-13697533 None:intergenic 30.0%
AGGTATACTTTGGTATACTT+TGG + chr7_2:13697783-13697802 None:intergenic 30.0%
AATCTTGATGAGGTATACTT+TGG + chr7_2:13697793-13697812 None:intergenic 30.0%
!!! TACCTACGTTTTTTTACCAA+TGG + chr7_2:13697820-13697839 None:intergenic 30.0%
ACTTCCTAAGAAAAAACTTG+AGG + chr7_2:13697891-13697910 None:intergenic 30.0%
!! ACTTTTTAGTAAAGCCATTG+TGG - chr7_2:13698134-13698153 Msa1049970:intron 30.0%
! ATTTTACAGTTGTAGTATGG+TGG + chr7_2:13698647-13698666 None:intergenic 30.0%
! GGTATTTTACAGTTGTAGTA+TGG + chr7_2:13698650-13698669 None:intergenic 30.0%
ACGTGAAAATAGTTCTTTGT+AGG - chr7_2:13698716-13698735 Msa1049970:intron 30.0%
TAGTTCTTTGTAGGATATCT+AGG - chr7_2:13698725-13698744 Msa1049970:intron 30.0%
ATCAAATACGATCTTGTCAA+AGG + chr7_2:13698986-13699005 None:intergenic 30.0%
!!! TGTCATTTTCCATCATCAAT+GGG + chr7_2:13699122-13699141 None:intergenic 30.0%
! TTTACCTTGTTGTCATTACT+CGG + chr7_2:13699324-13699343 None:intergenic 30.0%
TAAAGGCAAGATCGTTAATT+GGG - chr7_2:13699374-13699393 Msa1049970:CDS 30.0%
AGTCATATATTTGTGATGTG+TGG - chr7_2:13699535-13699554 Msa1049970:CDS 30.0%
ATATATTTGTGATGTGTGGA+AGG - chr7_2:13699539-13699558 Msa1049970:CDS 30.0%
GAATTAGACAAGGATGAAAA+TGG - chr7_2:13699570-13699589 Msa1049970:CDS 30.0%
GAAACTAAAGGAGTTAACAT+TGG - chr7_2:13699668-13699687 Msa1049970:CDS 30.0%
ATGGAATGACAAGAAAGTGA+GGG + chr7_2:13696551-13696570 None:intergenic 35.0%
TATGGAATGACAAGAAAGTG+AGG + chr7_2:13696552-13696571 None:intergenic 35.0%
GATTTATATGACCTGGGATT+GGG + chr7_2:13696575-13696594 None:intergenic 35.0%
ACATGACATAATTGCATGAG+GGG + chr7_2:13696597-13696616 None:intergenic 35.0%
! TCTATTAGCTTAGGAAGCAA+AGG + chr7_2:13696831-13696850 None:intergenic 35.0%
TTGTTACCTTCAATATGGGA+TGG - chr7_2:13696895-13696914 Msa1049970:CDS 35.0%
TGTTACCTTCAATATGGGAT+GGG - chr7_2:13696896-13696915 Msa1049970:CDS 35.0%
GGACAAAGCTTAGGAATTAA+AGG - chr7_2:13696930-13696949 Msa1049970:CDS 35.0%
! TGCTGTGTTGTTATACATCT+GGG - chr7_2:13697143-13697162 Msa1049970:CDS 35.0%
ATTGGACACCTCAGATTAAT+CGG + chr7_2:13697247-13697266 None:intergenic 35.0%
ATTAAAATAACCACGGGGTT+AGG - chr7_2:13697687-13697706 Msa1049970:intron 35.0%
CAATGGAGATAATCTTGATG+AGG + chr7_2:13697803-13697822 None:intergenic 35.0%
CTCATCAAGATTATCTCCAT+TGG - chr7_2:13697801-13697820 Msa1049970:intron 35.0%
CTCCATTGGTAAAAAAACGT+AGG - chr7_2:13697815-13697834 Msa1049970:intron 35.0%
CCTTAGTTCAATAAGTTGTG+AGG + chr7_2:13698062-13698081 None:intergenic 35.0%
CCTCACAACTTATTGAACTA+AGG - chr7_2:13698059-13698078 Msa1049970:intron 35.0%
! GGAAGTACAAATGTACAATG+TGG - chr7_2:13698329-13698348 Msa1049970:intron 35.0%
CTAAAACATGGTACTTGTGT+AGG + chr7_2:13698391-13698410 None:intergenic 35.0%
! CTACACAAGTACCATGTTTT+AGG - chr7_2:13698389-13698408 Msa1049970:intron 35.0%
AGACACATGATAGTTTCATG+TGG + chr7_2:13698520-13698539 None:intergenic 35.0%
!!! CTTTTGAGACGAAGAACATT+CGG + chr7_2:13698671-13698690 None:intergenic 35.0%
CAAGTAAGGTGGAGTTTAAT+AGG + chr7_2:13698809-13698828 None:intergenic 35.0%
CTAAGAATCCAAGACAAGTA+AGG + chr7_2:13698823-13698842 None:intergenic 35.0%
GAGCTGAATTTCTTGATCTT+TGG + chr7_2:13698917-13698936 None:intergenic 35.0%
!!! ACGTTTTTAGTGTCCATCTT+TGG + chr7_2:13698952-13698971 None:intergenic 35.0%
AAACCATGAAGTTAGGACAT+TGG - chr7_2:13699025-13699044 Msa1049970:intron 35.0%
!!! CTGTCATTTTCCATCATCAA+TGG + chr7_2:13699123-13699142 None:intergenic 35.0%
ACAGCAACAAAAGTTCATTC+TGG - chr7_2:13699139-13699158 Msa1049970:intron 35.0%
AAGACATGACTTCCTTAGAT+TGG - chr7_2:13699166-13699185 Msa1049970:intron 35.0%
TTGCTTATCTAGCCAATCTA+AGG + chr7_2:13699181-13699200 None:intergenic 35.0%
GAAACATATACGACAGAATG+AGG + chr7_2:13699207-13699226 None:intergenic 35.0%
TCTGTCGTATATGTTTCCTT+CGG - chr7_2:13699210-13699229 Msa1049970:intron 35.0%
ATATGTTTCCTTCGGTAGTT+TGG - chr7_2:13699218-13699237 Msa1049970:intron 35.0%
! TCCTTAACAAGCCTTTTCTT+TGG - chr7_2:13699289-13699308 Msa1049970:CDS 35.0%
!! TCCAAAGAAAAGGCTTGTTA+AGG + chr7_2:13699293-13699312 None:intergenic 35.0%
TAGTTCCAAGGAATTCATCA+GGG + chr7_2:13699356-13699375 None:intergenic 35.0%
TTAGTTCCAAGGAATTCATC+AGG + chr7_2:13699357-13699376 None:intergenic 35.0%
GATGAATTCCTTGGAACTAA+AGG - chr7_2:13699357-13699376 Msa1049970:CDS 35.0%
CTAAAGGCAAGATCGTTAAT+TGG - chr7_2:13699373-13699392 Msa1049970:CDS 35.0%
CTAATGAAACAAGCTATAGC+AGG + chr7_2:13699426-13699445 None:intergenic 35.0%
GCTTGTTTCATTAGTCATTG+TGG - chr7_2:13699432-13699451 Msa1049970:CDS 35.0%
GTTTCATTAGTCATTGTGGT+TGG - chr7_2:13699436-13699455 Msa1049970:CDS 35.0%
! ACCATAGAAGGTGTATATTC+TGG - chr7_2:13699465-13699484 Msa1049970:CDS 35.0%
ACCAGAATATACACCTTCTA+TGG + chr7_2:13699469-13699488 None:intergenic 35.0%
GGTTGGATTTGAATTAGACA+AGG - chr7_2:13699560-13699579 Msa1049970:CDS 35.0%
AGAAGAGATAAAGAAGAAGG+TGG - chr7_2:13699605-13699624 Msa1049970:CDS 35.0%
GGATTTATATGACCTGGGAT+TGG + chr7_2:13696576-13696595 None:intergenic 40.0%
TGAGGGGATTTATATGACCT+GGG + chr7_2:13696581-13696600 None:intergenic 40.0%
ATGAGGGGATTTATATGACC+TGG + chr7_2:13696582-13696601 None:intergenic 40.0%
TGTGGCTGAATTCTGTGTTA+AGG + chr7_2:13696650-13696669 None:intergenic 40.0%
AAGACAACAGAAGTGACCAA+AGG - chr7_2:13696772-13696791 Msa1049970:CDS 40.0%
! ATTAGCTTAGGAAGCAAAGG+AGG + chr7_2:13696828-13696847 None:intergenic 40.0%
TTGGAAGTTGGACAAAGCTT+AGG - chr7_2:13696921-13696940 Msa1049970:CDS 40.0%
! GATGGAGTAATTGATTCAGC+AGG - chr7_2:13697020-13697039 Msa1049970:CDS 40.0%
! CTGCTGTGTTGTTATACATC+TGG - chr7_2:13697142-13697161 Msa1049970:CDS 40.0%
TTTAAATGACCCCCCACAAA+TGG + chr7_2:13697416-13697435 None:intergenic 40.0%
! CTTGAGAGAAGTACACTTCA+AGG - chr7_2:13697469-13697488 Msa1049970:intron 40.0%
AAGGTCCCAAACTAACAACT+AGG - chr7_2:13697488-13697507 Msa1049970:intron 40.0%
! GTTGGCCTAGTTGTTAGTTT+GGG + chr7_2:13697441-13697460 None:intergenic 40.0%
TGAATGTAGGGTAGCTTATG+AGG - chr7_2:13697727-13697746 Msa1049970:intron 40.0%
TGTTGAATTGTATTGCCGTG+TGG - chr7_2:13698220-13698239 Msa1049970:intron 40.0%
GTTGAATTGTATTGCCGTGT+GGG - chr7_2:13698221-13698240 Msa1049970:intron 40.0%
TGGTACTCTCACAAGTACTT+GGG - chr7_2:13698349-13698368 Msa1049970:intron 40.0%
TTAAGGTAGAGATGTTCCAC+AGG - chr7_2:13698482-13698501 Msa1049970:intron 40.0%
TAAGGTAGAGATGTTCCACA+GGG - chr7_2:13698483-13698502 Msa1049970:intron 40.0%
TGATAGTTTCATGTGGTCTC+AGG + chr7_2:13698513-13698532 None:intergenic 40.0%
! ACATGTCACTTGGAAGCAAA+AGG + chr7_2:13698601-13698620 None:intergenic 40.0%
TTTGCTTCCAAGTGACATGT+TGG - chr7_2:13698601-13698620 Msa1049970:intron 40.0%
TTACAGTTGTAGTATGGTGG+TGG + chr7_2:13698644-13698663 None:intergenic 40.0%
CGAATGTTCTTCGTCTCAAA+AGG - chr7_2:13698669-13698688 Msa1049970:intron 40.0%
AAACTCCACCTTACTTGTCT+TGG - chr7_2:13698812-13698831 Msa1049970:intron 40.0%
AGAATCCAAGACAAGTAAGG+TGG + chr7_2:13698820-13698839 None:intergenic 40.0%
TGGACACTAAAAACGTTCCA+TGG - chr7_2:13698956-13698975 Msa1049970:intron 40.0%
ACACTAAAAACGTTCCATGG+CGG - chr7_2:13698959-13698978 Msa1049970:intron 40.0%
GAGATGCAAACCATGAAGTT+AGG - chr7_2:13699018-13699037 Msa1049970:intron 40.0%
! TGGTAGGAACTTTGGTGATA+TGG + chr7_2:13699094-13699113 None:intergenic 40.0%
TCACCAAAGTTCCTACCAAT+TGG - chr7_2:13699096-13699115 Msa1049970:intron 40.0%
ACATATACGACAGAATGAGG+TGG + chr7_2:13699204-13699223 None:intergenic 40.0%
GTTAAGGAGATCAAGTCCTA+AGG + chr7_2:13699277-13699296 None:intergenic 40.0%
GGACGAACAATCCAAAGAAA+AGG + chr7_2:13699303-13699322 None:intergenic 40.0%
TGAAACAAGCTATAGCAGGA+TGG + chr7_2:13699422-13699441 None:intergenic 40.0%
GGTTGGAATTCTACCATAGA+AGG - chr7_2:13699453-13699472 Msa1049970:CDS 40.0%
CTGGTAAACCTTTCTTGTGT+TGG - chr7_2:13699484-13699503 Msa1049970:CDS 40.0%
ATTTGTGATGTGTGGAAGGT+TGG - chr7_2:13699543-13699562 Msa1049970:CDS 40.0%
ATATGACCTGGGATTGGGTA+TGG + chr7_2:13696570-13696589 None:intergenic 45.0%
AGTGATCTTGCAGCCATGTT+TGG + chr7_2:13696625-13696644 None:intergenic 45.0%
AACTTTGTCACTCTCCCAGA+TGG - chr7_2:13696738-13696757 Msa1049970:CDS 45.0%
CTTCATCCTCCAAACCATCT+GGG + chr7_2:13696755-13696774 None:intergenic 45.0%
TCTTCATCCTCCAAACCATC+TGG + chr7_2:13696756-13696775 None:intergenic 45.0%
CAAAGCCCATCCCATATTGA+AGG + chr7_2:13696904-13696923 None:intergenic 45.0%
! CTTCAATATGGGATGGGCTT+TGG - chr7_2:13696902-13696921 Msa1049970:CDS 45.0%
! GACTAGCTCAGCAACTTCTT+TGG - chr7_2:13696965-13696984 Msa1049970:CDS 45.0%
! CCTCAGATTAATCGGCTCTT+GGG + chr7_2:13697239-13697258 None:intergenic 45.0%
! ACCTCAGATTAATCGGCTCT+TGG + chr7_2:13697240-13697259 None:intergenic 45.0%
CAATACCACCGTCCATTTGT+GGG - chr7_2:13697263-13697282 Msa1049970:CDS 45.0%
AATACCACCGTCCATTTGTG+GGG - chr7_2:13697264-13697283 Msa1049970:CDS 45.0%
ATTAAATGGGCCCCCACAAA+TGG + chr7_2:13697278-13697297 None:intergenic 45.0%
! AGATTAGTCGACTCTTGGGT+CGG + chr7_2:13697373-13697392 None:intergenic 45.0%
! CCTCAGATTAGTCGACTCTT+GGG + chr7_2:13697377-13697396 None:intergenic 45.0%
! ACCTCAGATTAGTCGACTCT+TGG + chr7_2:13697378-13697397 None:intergenic 45.0%
CAATCCCACTGTCCATTTGT+GGG - chr7_2:13697401-13697420 Msa1049970:intron 45.0%
AATCCCACTGTCCATTTGTG+GGG - chr7_2:13697402-13697421 Msa1049970:intron 45.0%
TTCTCTCAAGATCTCGAGGT+TGG + chr7_2:13697459-13697478 None:intergenic 45.0%
GTACTTCTCTCAAGATCTCG+AGG + chr7_2:13697463-13697482 None:intergenic 45.0%
!! GGTTGGCCTAGTTGTTAGTT+TGG + chr7_2:13697442-13697461 None:intergenic 45.0%
!! TGTTGGCTTTGTGGTTGAGT+GGG + chr7_2:13697619-13697638 None:intergenic 45.0%
!! ATGTTGGCTTTGTGGTTGAG+TGG + chr7_2:13697620-13697639 None:intergenic 45.0%
GGGGTTAGGTTTAGCAAACA+GGG - chr7_2:13697701-13697720 Msa1049970:intron 45.0%
GGGTTAGGTTTAGCAAACAG+GGG - chr7_2:13697702-13697721 Msa1049970:intron 45.0%
CAAACAGGGGACTGAATGTA+GGG - chr7_2:13697715-13697734 Msa1049970:intron 45.0%
TTGTATTGCCGTGTGGGTAA+CGG - chr7_2:13698227-13698246 Msa1049970:intron 45.0%
ACAACTTTCCGTTACCCACA+CGG + chr7_2:13698238-13698257 None:intergenic 45.0%
GTGGTACTCTCACAAGTACT+TGG - chr7_2:13698348-13698367 Msa1049970:intron 45.0%
AGTTTCATGTGGTCTCAGGT+CGG + chr7_2:13698509-13698528 None:intergenic 45.0%
TTCCCATCTCATGTGTTCTC+AGG - chr7_2:13698544-13698563 Msa1049970:intron 45.0%
GACCTGAGAACACATGAGAT+GGG + chr7_2:13698549-13698568 None:intergenic 45.0%
TTGCGGTAGAAAGTTCAGCA+GGG + chr7_2:13698574-13698593 None:intergenic 45.0%
ATTGCGGTAGAAAGTTCAGC+AGG + chr7_2:13698575-13698594 None:intergenic 45.0%
! TGGAAGCAAAAGGTGCATTG+CGG + chr7_2:13698591-13698610 None:intergenic 45.0%
TCATGAGCCAACATGTCACT+TGG + chr7_2:13698611-13698630 None:intergenic 45.0%
CTCTCCAAACATGCCAAAGA+TGG - chr7_2:13698936-13698955 Msa1049970:intron 45.0%
GTGTCCATCTTTGGCATGTT+TGG + chr7_2:13698943-13698962 None:intergenic 45.0%
CCACCAATGTCCTAACTTCA+TGG + chr7_2:13699031-13699050 None:intergenic 45.0%
CCATGAAGTTAGGACATTGG+TGG - chr7_2:13699028-13699047 Msa1049970:intron 45.0%
TCATCAATGGGCCAATTGGT+AGG + chr7_2:13699110-13699129 None:intergenic 45.0%
ACCAATTGGCCCATTGATGA+TGG - chr7_2:13699110-13699129 Msa1049970:intron 45.0%
TCCATCATCAATGGGCCAAT+TGG + chr7_2:13699114-13699133 None:intergenic 45.0%
CATTACTGCCAAACTACCGA+AGG + chr7_2:13699229-13699248 None:intergenic 45.0%
CTTCGGTAGTTTGGCAGTAA+TGG - chr7_2:13699227-13699246 Msa1049970:intron 45.0%
TCGTCCGAGTAATGACAACA+AGG - chr7_2:13699317-13699336 Msa1049970:CDS 45.0%
GCATACCCTGATGAATTCCT+TGG - chr7_2:13699348-13699367 Msa1049970:CDS 45.0%
! CGATCTTGCCTTTAGTTCCA+AGG + chr7_2:13699368-13699387 None:intergenic 45.0%
GCAAATGGCCAACACAAGAA+AGG + chr7_2:13699495-13699514 None:intergenic 45.0%
!!! TTTTTATTTTTTTTAAAACT+CGG - chr7_2:13697207-13697226 Msa1049970:CDS 5.0%
!! TAAAAATAAAAATAAAATGT+TGG + chr7_2:13697636-13697655 None:intergenic 5.0%
GTCATTCCATACCCAATCCC+AGG - chr7_2:13696561-13696580 Msa1049970:CDS 50.0%
TGTCACTCTCCCAGATGGTT+TGG - chr7_2:13696743-13696762 Msa1049970:CDS 50.0%
!! ATGGGATGGGCTTTGGAAGT+TGG - chr7_2:13696909-13696928 Msa1049970:CDS 50.0%
! AGATTAATCGGCTCTTGGGC+CGG + chr7_2:13697235-13697254 None:intergenic 50.0%
CCCAAGAGCCGATTAATCTG+AGG - chr7_2:13697236-13697255 Msa1049970:CDS 50.0%
CCACAAATGGACGGTGGTAT+TGG + chr7_2:13697265-13697284 None:intergenic 50.0%
CCAATACCACCGTCCATTTG+TGG - chr7_2:13697262-13697281 Msa1049970:CDS 50.0%
ATACCACCGTCCATTTGTGG+GGG - chr7_2:13697265-13697284 Msa1049970:CDS 50.0%
CCCAAGAGTCGACTAATCTG+AGG - chr7_2:13697374-13697393 Msa1049970:intron 50.0%
CCACAAATGGACAGTGGGAT+TGG + chr7_2:13697403-13697422 None:intergenic 50.0%
CCAATCCCACTGTCCATTTG+TGG - chr7_2:13697400-13697419 Msa1049970:intron 50.0%
ATCCCACTGTCCATTTGTGG+GGG - chr7_2:13697403-13697422 Msa1049970:intron 50.0%
GAATCAGCGTGGTCTAGTCT+CGG + chr7_2:13697588-13697607 None:intergenic 50.0%
GGGAGAGTTAAGAATCAGCG+TGG + chr7_2:13697599-13697618 None:intergenic 50.0%
! GTTTGCTAAACCTAACCCCG+TGG + chr7_2:13697700-13697719 None:intergenic 50.0%
CGGGGTTAGGTTTAGCAAAC+AGG - chr7_2:13697700-13697719 Msa1049970:intron 50.0%
GCAAACAGGGGACTGAATGT+AGG - chr7_2:13697714-13697733 Msa1049970:intron 50.0%
CGACCTGAGAACACATGAGA+TGG + chr7_2:13698550-13698569 None:intergenic 50.0%
TGCGGTAGAAAGTTCAGCAG+GGG + chr7_2:13698573-13698592 None:intergenic 50.0%
ATCTTGTCAAAGGTCCGCCA+TGG + chr7_2:13698976-13698995 None:intergenic 50.0%
GGGCCAATTGGTAGGAACTT+TGG + chr7_2:13699102-13699121 None:intergenic 50.0%
! CACTCTCCCAGATGGTTTGG+AGG - chr7_2:13696746-13696765 Msa1049970:CDS 55.0%
AATGGGCCCCCACAAATGGA+CGG + chr7_2:13697274-13697293 None:intergenic 55.0%
TCCCACTGTCCATTTGTGGG+GGG - chr7_2:13697404-13697423 Msa1049970:intron 55.0%
ACCCCCCACAAATGGACAGT+GGG + chr7_2:13697408-13697427 None:intergenic 55.0%
GACCCCCCACAAATGGACAG+TGG + chr7_2:13697409-13697428 None:intergenic 60.0%
GGGCCCCCACAAATGGACGG+TGG + chr7_2:13697271-13697290 None:intergenic 70.0%
GTGGTCTCAGGTCGGCCCTG+TGG + chr7_2:13698501-13698520 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 13696540 13699755 13696540 ID=Msa1049970;Name=Msa1049970
chr7_2 mRNA 13696540 13699755 13696540 ID=Msa1049970-mRNA-1;Parent=Msa1049970;Name=Msa1049970-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|1|0|1|1|1|2|0|450
chr7_2 exon 13699254 13699755 13699254 ID=Msa1049970-mRNA-1:exon:3402;Parent=Msa1049970-mRNA-1
chr7_2 exon 13696540 13697390 13696540 ID=Msa1049970-mRNA-1:exon:3401;Parent=Msa1049970-mRNA-1
chr7_2 CDS 13699254 13699755 13699254 ID=Msa1049970-mRNA-1:cds;Parent=Msa1049970-mRNA-1
chr7_2 CDS 13696540 13697390 13696540 ID=Msa1049970-mRNA-1:cds;Parent=Msa1049970-mRNA-1
Gene Sequence

>Msa1049970

ATGGGTATCCCTCACTTTCTTGTCATTCCATACCCAATCCCAGGTCATATAAATCCCCTCATGCAATTATGTCATGTTTTAACCAAACATGGCTGCAAGATCACTTTCCTTAACACAGAATTCAGCCACAAAAGAACCAACAACAATAATAATATTTCTATTGTTGGAAAAGACAACCTCAAAAATGAAGAAACAATAAACTTTGTCACTCTCCCAGATGGTTTGGAGGATGAAGACAACAGAAGTGACCAAAGGAAAGTTATTTTCTCAATCAAAAGAAACATGCCTCCTTTGCTTCCTAAGCTAATAGAAGATGTTAATGCTTTGGATGCTGAAAATAAGATTTCTTGTATTATTGTTACCTTCAATATGGGATGGGCTTTGGAAGTTGGACAAAGCTTAGGAATTAAAGGTGTTTTTCTTTGGACTAGCTCAGCAACTTCTTTGGCTTATTGTGATAGCATCCCTAAACTAATTGATGATGGAGTAATTGATTCAGCAGGAATTTATACCAAAGATCAAGAAATTCAGCTCTCTCCAAACATGCCAAAGATGGACACTAAAAACGTTCCATGGCGGACCTTTGACAAGATCGTATTTGATCATCTTGCACAAGAGATGCAAACCATGAAGTTAGGACATTGGTGGCTTTGCAACACAACTTATGATCTTGAGCAAGCAACATTTTCCATATCACCAAAGTTCCTACCAATTGGCCCATTGATGATGGAAAATGACAGCAACAAAAGTTCATTCTGGCAAGAAGACATGACTTCCTTAGATTGGCTAGATAAGCAACCACCTCATTCTGTCGTATATGTTTCCTTCGGTAGTTTGGCAGTAATGGACCAAAACCAATTTAAAGAATTAGCCTTAGGACTTGATCTCCTTAACAAGCCTTTTCTTTGGATTGTTCGTCCGAGTAATGACAACAAGGTAAACTATGCATACCCTGATGAATTCCTTGGAACTAAAGGCAAGATCGTTAATTGGGCACCGCAAAAAAAGATATTGAACCATCCTGCTATAGCTTGTTTCATTAGTCATTGTGGTTGGAATTCTACCATAGAAGGTGTATATTCTGGTAAACCTTTCTTGTGTTGGCCATTTGCAACTGATCAATTTATGAACAAGTCATATATTTGTGATGTGTGGAAGGTTGGATTTGAATTAGACAAGGATGAAAATGGGCTAGTACTAAAAGAAGAGATAAAGAAGAAGGTGGAACAATTGCTTGATGATCAAGATGTAAAAGAAAGATCATTGAAACTAAAGGAGTTAACATTGGATAACATAGTAGAAAATGGTCAATCTTCGAAGAATCTCAAAAACTTTATCAATTGGGCAATGTAA

Protein sequence

>Msa1049970

MGIPHFLVIPYPIPGHINPLMQLCHVLTKHGCKITFLNTEFSHKRTNNNNNISIVGKDNLKNEETINFVTLPDGLEDEDNRSDQRKVIFSIKRNMPPLLPKLIEDVNALDAENKISCIIVTFNMGWALEVGQSLGIKGVFLWTSSATSLAYCDSIPKLIDDGVIDSAGIYTKDQEIQLSPNMPKMDTKNVPWRTFDKIVFDHLAQEMQTMKLGHWWLCNTTYDLEQATFSISPKFLPIGPLMMENDSNKSSFWQEDMTSLDWLDKQPPHSVVYVSFGSLAVMDQNQFKELALGLDLLNKPFLWIVRPSNDNKVNYAYPDEFLGTKGKIVNWAPQKKILNHPAIACFISHCGWNSTIEGVYSGKPFLCWPFATDQFMNKSYICDVWKVGFELDKDENGLVLKEEIKKKVEQLLDDQDVKERSLKLKELTLDNIVENGQSSKNLKNFINWAM*