AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0713510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0713510 MtrunA17_Chr5g0400501 89.206 491 0 1 1 491 1 438 0.0 876
Msa0713510 MtrunA17_Chr8g0368141 39.554 493 228 10 1 490 1 426 2.63e-113 341
Msa0713510 MtrunA17_Chr5g0413081 37.931 493 236 9 1 490 1 426 2.25e-104 318
Msa0713510 MtrunA17_Chr3g0141861 28.911 505 275 10 6 491 3 442 9.68e-68 224
Msa0713510 MtrunA17_Chr5g0427331 29.550 511 273 11 6 491 3 451 1.02e-64 216
Msa0713510 MtrunA17_Chr7g0271601 25.598 418 220 12 81 490 76 410 7.38e-35 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0713510 AT5G46630.1 84.114 491 25 1 1 491 1 438 0.0 834
Msa0713510 AT5G46630.2 83.262 466 25 1 1 466 1 413 0.0 781
Msa0713510 AT1G60780.1 38.337 493 234 10 1 490 1 426 2.74e-111 336
Msa0713510 AT1G10730.1 37.120 493 240 10 1 490 1 426 3.62e-104 318
Msa0713510 AT4G24550.2 30.214 513 266 10 6 491 4 451 2.21e-72 236
Msa0713510 AT4G24550.3 29.306 447 225 9 6 426 4 385 1.77e-55 190
Msa0713510 AT4G24550.1 28.506 435 222 8 6 415 4 374 8.08e-55 188
Msa0713510 AT1G56590.1 24.638 414 229 9 81 490 80 414 3.18e-31 125

Find 134 sgRNAs with CRISPR-Local

Find 681 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCACTATTCAAATCATATTT+TGG 0.157391 5_1:+5698393 Msa0713510:CDS
TTCCAAAGCCATCTTGTTAA+TGG 0.192502 5_1:+5705172 Msa0713510:three_prime_UTR
GTCAAACTTCAGGGATTAAT+TGG 0.211349 5_1:+5705012 Msa0713510:three_prime_UTR
AACCTCTCCGTCGGTGAAAT+TGG 0.239970 5_1:+5696692 Msa0713510:five_prime_UTR
ACCGATTCAGATGGAGTTTC+AGG 0.260698 5_1:+5704310 Msa0713510:CDS
ATGCAATCTCAAATAATTAA+AGG 0.264114 5_1:+5705044 Msa0713510:three_prime_UTR
CTTATGAAGTGCTTTCTATC+TGG 0.279752 5_1:+5701226 Msa0713510:CDS
GTAACTTGCAACGTCGCATT+TGG 0.288584 5_1:-5700918 None:intergenic
GGTTGCTGTTGTCAAACTTC+AGG 0.288819 5_1:+5705002 Msa0713510:three_prime_UTR
TTAAATCACGCCCTACTAAA+AGG 0.294099 5_1:+5701308 Msa0713510:CDS
GTTGCTTTACAGGGGAAATA+TGG 0.297064 5_1:+5697961 Msa0713510:intron
AAACCAACCTTGGATGAAAA+AGG 0.306447 5_1:-5700517 None:intergenic
TGTTCGACCAAGTTCCTTGA+TGG 0.315007 5_1:-5703689 None:intergenic
CAGCTATTGATTGTTTAGTT+TGG 0.318085 5_1:+5703944 Msa0713510:CDS
TTTCAGGTAAAGAGTGTCTT+TGG 0.322597 5_1:+5703820 Msa0713510:intron
TCGTCAAATTTACACATTGA+TGG 0.324003 5_1:-5701608 None:intergenic
GTCTCTATCGCGACGATGTC+GGG 0.365747 5_1:+5696798 Msa0713510:CDS
AAATGCGACGTTGCAAGTTA+CGG 0.367377 5_1:+5700920 Msa0713510:CDS
TTCCATTAACAAGATGGCTT+TGG 0.371916 5_1:-5705174 None:intergenic
TCTGGGTTTCAATGACATAT+TGG 0.392745 5_1:+5702885 Msa0713510:CDS
ATCAGTTCAAATTCACCATC+TGG 0.398480 5_1:-5701666 None:intergenic
CTCATTTACGAGCTTCTAGA+TGG 0.399037 5_1:+5698456 Msa0713510:CDS
GTTGCTGTTGTCAAACTTCA+GGG 0.401444 5_1:+5705003 Msa0713510:three_prime_UTR
TTCAAACCCAACTTCAAATC+AGG 0.404289 5_1:-5701253 None:intergenic
GTTCCCATGTTCACAGCATC+TGG 0.411153 5_1:+5704779 Msa0713510:CDS
TCTCAACAGAAAGATGATAA+AGG 0.417468 5_1:+5705384 Msa0713510:three_prime_UTR
TTTAATGAAAATCTTTGAAT+GGG 0.420061 5_1:+5702966 Msa0713510:CDS
AATGCGACGTTGCAAGTTAC+GGG 0.424532 5_1:+5700921 Msa0713510:CDS
TGCAGGATAAGAAAATTTCC+TGG 0.425356 5_1:+5704212 Msa0713510:intron
GATGGTTGGCAATACTTTGA+AGG 0.426750 5_1:-5703671 None:intergenic
TCAATTTCTGCGCTCAAAGT+TGG 0.427617 5_1:-5704245 None:intergenic
CCTTCAAGCTATTATCAGCT+TGG 0.435499 5_1:-5702996 None:intergenic
CCAAGCTGATAATAGCTTGA+AGG 0.435523 5_1:+5702996 Msa0713510:CDS
AGGGAGGTGTATTGTCAAAC+TGG 0.436420 5_1:+5696506 Msa0713510:five_prime_UTR
TGCAACGTCGCATTTGGAAC+AGG 0.439125 5_1:-5700912 None:intergenic
GTTTCCGATTGATCTTCTTC+CGG 0.440572 5_1:+5696667 Msa0713510:five_prime_UTR
TTGGGTTTGAATGATAAGAT+TGG 0.441817 5_1:+5701265 Msa0713510:CDS
TTAAAGGTGCAGTTCAATCT+AGG 0.444714 5_1:+5705060 Msa0713510:three_prime_UTR
GGAATGCCTGATTTGAAGTT+GGG 0.447084 5_1:+5701247 Msa0713510:CDS
TTTGCAGAAATCATGGACTT+TGG 0.450042 5_1:+5700430 Msa0713510:intron
TCACACTCTCCACAATATCT+AGG 0.454091 5_1:-5701073 None:intergenic
AAGCTTTATATTACTCAAGA+AGG 0.456687 5_1:+5700484 Msa0713510:CDS
CGCTTTCAAGTTCGTTGTAG+AGG 0.457965 5_1:+5698129 Msa0713510:CDS
AAGCAGGATCATACGAGATT+AGG 0.459777 5_1:+5704965 Msa0713510:CDS
TTTGCTGTTTGTTTCGGCAC+AGG 0.461516 5_1:-5703880 None:intergenic
TCTGGGTTTATCCGGCCAAA+TGG 0.468255 5_1:+5702936 Msa0713510:CDS
CTGAAGGTGTGGGAAAAGAG+TGG 0.468687 5_1:+5704907 Msa0713510:intron
CGATGACTGAAAAGAAATCA+TGG 0.469490 5_1:+5704279 Msa0713510:CDS
CGTCTCTATCGCGACGATGT+CGG 0.469885 5_1:+5696797 Msa0713510:CDS
ACCTGAAACTCCATCTGAAT+CGG 0.470886 5_1:-5704311 None:intergenic
ACATGTATTTGCAGAAATCA+TGG 0.472173 5_1:+5700423 Msa0713510:intron
TTTGACAATACACCTCCCTT+TGG 0.476254 5_1:-5696502 None:intergenic
AAATACAATACAATGTGTAC+AGG 0.480845 5_1:-5705222 None:intergenic
TGGAATGCCTGATTTGAAGT+TGG 0.486730 5_1:+5701246 Msa0713510:CDS
ACGGATGGAAGTAAATGTTA+AGG 0.488849 5_1:+5703711 Msa0713510:CDS
CATCCACCAATCTGCTTCAC+AGG 0.489532 5_1:-5698034 None:intergenic
AATCTTCTTATGTCGTCAAA+AGG 0.490176 5_1:+5701095 Msa0713510:CDS
TGGGTACAACACTGTTGAAT+GGG 0.491741 5_1:+5704927 Msa0713510:CDS
GCTGTTGGTTGGCGGAGAGA+AGG 0.495289 5_1:+5700945 Msa0713510:CDS
TTATGTTTCCATTAACAAGA+TGG 0.497347 5_1:-5705180 None:intergenic
TCACCGACGGAGAGGTTCGC+CGG 0.498153 5_1:-5696686 None:intergenic
TTTATCATCTTTCTGTTGAG+AGG 0.501457 5_1:-5705382 None:intergenic
CGACCAAGTTCCTTGATGGT+TGG 0.502376 5_1:-5703685 None:intergenic
GTGGGTACAACACTGTTGAA+TGG 0.504729 5_1:+5704926 Msa0713510:CDS
ATATAAAGCTTTAAGATCTC+CGG 0.510605 5_1:-5700472 None:intergenic
TTGCCAACCATCAAGGAACT+TGG 0.515329 5_1:+5703682 Msa0713510:CDS
ACCAATCTGCTTCACAGGAC+AGG 0.518339 5_1:-5698029 None:intergenic
GTTCTGCGCTGTGATGTAAC+GGG 0.519953 5_1:+5701196 Msa0713510:CDS
TAGACCAGATGCTGTGAACA+TGG 0.520035 5_1:-5704783 None:intergenic
GTCAATCCGACGACTCATAA+CGG 0.521227 5_1:+5696535 Msa0713510:five_prime_UTR
CATAAGACGCACGTGCCAAA+GGG 0.522731 5_1:+5696487 Msa0713510:five_prime_UTR
TTACGGGTGCTGTTGGTTGG+CGG 0.523294 5_1:+5700937 Msa0713510:CDS
CAAAGTATTGCCAACCATCA+AGG 0.525550 5_1:+5703675 Msa0713510:CDS
GATTAGGTGCTAGACACATT+GGG 0.526367 5_1:+5704981 Msa0713510:exon
ATGGTATGAGATTGCTTCGA+TGG 0.526701 5_1:+5705352 Msa0713510:three_prime_UTR
TTCGCCGGAAGAAGATCAAT+CGG 0.527206 5_1:-5696671 None:intergenic
GTGCAAAGATGTTTGCACTA+GGG 0.528491 5_1:+5703842 Msa0713510:CDS
TTTCAATGACATATTGGAGA+AGG 0.530324 5_1:+5702891 Msa0713510:CDS
AAGTTACGGGTGCTGTTGGT+TGG 0.531316 5_1:+5700934 Msa0713510:CDS
TGTTCTGCGCTGTGATGTAA+CGG 0.532251 5_1:+5701195 Msa0713510:CDS
GCAGGATAAGAAAATTTCCT+GGG 0.532433 5_1:+5704213 Msa0713510:intron
ATGGTTGGCAATACTTTGAA+GGG 0.536477 5_1:-5703670 None:intergenic
ACCTGTCCTGTGAAGCAGAT+TGG 0.537523 5_1:+5698028 Msa0713510:CDS
GCATAAGACGCACGTGCCAA+AGG 0.543266 5_1:+5696486 Msa0713510:five_prime_UTR
ACAGGTGTTCCTAGATATTG+TGG 0.545898 5_1:+5701064 Msa0713510:intron
GGTGCAAAGATGTTTGCACT+AGG 0.547993 5_1:+5703841 Msa0713510:CDS
AGATTAGGTGCTAGACACAT+TGG 0.550284 5_1:+5704980 Msa0713510:exon
AAAGTTGGCTCAGTTTGCCC+AGG 0.550589 5_1:-5704230 None:intergenic
ACGAGTTTCACAGTCACATC+CGG 0.553418 5_1:+5703904 Msa0713510:CDS
ATAATGCAAACGAAAGAACT+TGG 0.553697 5_1:+5698004 Msa0713510:CDS
TGCAAAGATGTTTGCACTAG+GGG 0.556537 5_1:+5703843 Msa0713510:CDS
AAACTTCAGGGATTAATTGG+TGG 0.561410 5_1:+5705015 Msa0713510:three_prime_UTR
ATCAGGTATCGTATCACTGA+GGG 0.564329 5_1:+5703637 Msa0713510:intron
TAAGTTGTGACTCTTTCTCA+AGG 0.567568 5_1:-5701288 None:intergenic
ATACACTGGATCGGAGATGC+CGG 0.569668 5_1:+5696721 Msa0713510:exon
TTATCCACAAAATCTTTCAC+CGG 0.572212 5_1:+5700453 Msa0713510:CDS
AGCGCAAGCTACATTAGCAT+TGG 0.574062 5_1:-5698110 None:intergenic
TAAACAGCGGAAGCAGCCAC+CGG 0.577176 5_1:-5696740 None:intergenic
GAAATTGGAAGTTGATACAC+TGG 0.577303 5_1:+5696707 Msa0713510:five_prime_UTR
CTTCCGGCGAACCTCTCCGT+CGG 0.579599 5_1:+5696683 Msa0713510:five_prime_UTR
TTGCAAGTTACGGGTGCTGT+TGG 0.580431 5_1:+5700930 Msa0713510:CDS
GACTAGACCACCGATTCAGA+TGG 0.586855 5_1:+5704301 Msa0713510:CDS
TTCGCTCCTCCACAGATCTA+CGG 0.587277 5_1:+5696634 Msa0713510:five_prime_UTR
GTGGTTTCGCCGTAGATCTG+TGG 0.589391 5_1:-5696643 None:intergenic
AATACAATACAATGTGTACA+GGG 0.590286 5_1:-5705221 None:intergenic
GTTCGCTACATCACAAAAGC+AGG 0.590440 5_1:+5704949 Msa0713510:CDS
TGTCCTGTGAAGCAGATTGG+TGG 0.590779 5_1:+5698031 Msa0713510:CDS
GGAACTTGGTCGAACACGGA+TGG 0.592221 5_1:+5703696 Msa0713510:CDS
TGAAGGTGTGGGAAAAGAGT+GGG 0.594343 5_1:+5704908 Msa0713510:intron
GGAAGAAGATCAATCGGAAA+CGG 0.602286 5_1:-5696665 None:intergenic
TCAAGGAACTTGGTCGAACA+CGG 0.609772 5_1:+5703692 Msa0713510:CDS
TAAAGGTGAAACTATAGTAA+CGG 0.615100 5_1:+5705401 Msa0713510:three_prime_UTR
AAATTTGACGAGGTTCAACT+CGG 0.616156 5_1:+5701620 Msa0713510:CDS
TGAGAGTAGAAGAGAAGAAG+CGG 0.617378 5_1:-5696588 None:intergenic
TCAACTTCCAATTTCACCGA+CGG 0.619304 5_1:-5696699 None:intergenic
CAGACTCCGTTATGAGTCGT+CGG 0.623841 5_1:-5696541 None:intergenic
GAACGAAACGACGTCGTCGA+CGG 0.626943 5_1:-5696611 None:intergenic
TGAAACTCCATCTGAATCGG+TGG 0.627007 5_1:-5704308 None:intergenic
TTCCAATTTCACCGACGGAG+AGG 0.628391 5_1:-5696694 None:intergenic
TGGAAGTTGATACACTGGAT+CGG 0.630964 5_1:+5696712 Msa0713510:five_prime_UTR
GTTTACTTCTTGAACCTCCG+TGG 0.631442 5_1:+5696758 Msa0713510:CDS
GTTTCGCCGTAGATCTGTGG+AGG 0.647008 5_1:-5696640 None:intergenic
AAGACGCACGTGCCAAAGGG+AGG 0.649377 5_1:+5696490 Msa0713510:five_prime_UTR
ATCAATGTGTAAATTTGACG+AGG 0.649503 5_1:+5701610 Msa0713510:CDS
CACTGGATCGGAGATGCCGG+TGG 0.655709 5_1:+5696724 Msa0713510:exon
AGACCAGATGCTGTGAACAT+GGG 0.665866 5_1:-5704782 None:intergenic
GATTGATGAGAACGTCACCA+CGG 0.673884 5_1:-5696775 None:intergenic
AGAAGATCAATCGGAAACGG+TGG 0.676547 5_1:-5696662 None:intergenic
AGTTCAAATTCACCATCTGG+AGG 0.689739 5_1:-5701663 None:intergenic
TTCTGCGCTGTGATGTAACG+GGG 0.698309 5_1:+5701197 Msa0713510:CDS
TATCAGGTATCGTATCACTG+AGG 0.719317 5_1:+5703636 Msa0713510:intron
ATACAATACAATGTGTACAG+GGG 0.728026 5_1:-5705220 None:intergenic
TGATGAGAACGTCACCACGG+AGG 0.731384 5_1:-5696772 None:intergenic
GAGGTTCAAGAAGTAAACAG+CGG 0.750495 5_1:-5696753 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATTTATAAAAGAAACT+AGG + chr5_1:5697786-5697805 Msa0713510:intron 10.0%
!! ATTCATTAAAAAAAAAAACT+TGG - chr5_1:5698635-5698654 None:intergenic 10.0%
!! ATGAAGTAAAAAAAAAAAAT+TGG - chr5_1:5698911-5698930 None:intergenic 10.0%
!!! TCTAATTATAAATTTTGTAA+AGG - chr5_1:5699128-5699147 None:intergenic 10.0%
!!! TTTATCTTTTTAACATATAA+CGG - chr5_1:5699269-5699288 None:intergenic 10.0%
!!! ATATTTTTTTATGTTGAAAT+TGG + chr5_1:5699864-5699883 Msa0713510:intron 10.0%
!!! TACAAACATTTTTTTTTAAA+AGG + chr5_1:5700616-5700635 Msa0713510:intron 10.0%
!!! ACAAACATTTTTTTTTAAAA+GGG + chr5_1:5700617-5700636 Msa0713510:intron 10.0%
!! GAAAAAAAAAAAAAACTTAA+AGG + chr5_1:5703067-5703086 Msa0713510:intron 10.0%
!!! AACCATTATTATATTTTTTT+TGG + chr5_1:5703268-5703287 Msa0713510:intron 10.0%
!! ATCCAAAAAAAATATAATAA+TGG - chr5_1:5703273-5703292 None:intergenic 10.0%
!!! TTTTTCATTCATTATATTTT+GGG + chr5_1:5705121-5705140 Msa0713510:three_prime_UTR 10.0%
!!! AAAAATCAGTTTAATATTTT+TGG + chr5_1:5705148-5705167 Msa0713510:three_prime_UTR 10.0%
!! AAAAACTTTATAGTTAAAAC+CGG - chr5_1:5697353-5697372 None:intergenic 15.0%
!!! TAACTATAAAGTTTTTTTGT+CGG + chr5_1:5697357-5697376 Msa0713510:intron 15.0%
!!! AAATTCTCATTTGTTAAAAA+AGG - chr5_1:5697619-5697638 None:intergenic 15.0%
!! TTAACAAATGAGAATTTATT+AGG + chr5_1:5697622-5697641 Msa0713510:intron 15.0%
!!! TTATAATATTAATGCCTTTT+CGG + chr5_1:5697822-5697841 Msa0713510:intron 15.0%
!!! TTATAATATTAATGCCTTTT+CGG + chr5_1:5697822-5697841 Msa0713510:intron 15.0%
!! TTTATTTATGATGATACTAT+TGG + chr5_1:5697914-5697933 Msa0713510:intron 15.0%
!! TTATTTATGATGATACTATT+GGG + chr5_1:5697915-5697934 Msa0713510:intron 15.0%
!! ATACTAAAATTGAACATTAA+AGG - chr5_1:5698512-5698531 None:intergenic 15.0%
!! TGTCTATATAACTAATAATA+AGG + chr5_1:5698718-5698737 Msa0713510:intron 15.0%
!! GTCTATATAACTAATAATAA+GGG + chr5_1:5698719-5698738 Msa0713510:intron 15.0%
!! AAAATTTAAAAAGCAGTTAA+CGG - chr5_1:5699220-5699239 None:intergenic 15.0%
!! CAACATAAAAAAATATTTCA+GGG - chr5_1:5699860-5699879 None:intergenic 15.0%
!! TCAACATAAAAAAATATTTC+AGG - chr5_1:5699861-5699880 None:intergenic 15.0%
!!! TTTTACTTGATAACTTTATA+AGG + chr5_1:5700222-5700241 Msa0713510:intron 15.0%
!! ATATTTATCATTTGAATCAT+TGG + chr5_1:5700378-5700397 Msa0713510:intron 15.0%
!! TATGTAAATACCTTAAAATA+AGG + chr5_1:5700549-5700568 Msa0713510:intron 15.0%
!!! CTTTTAAATAAAAATGTCAA+AGG - chr5_1:5701386-5701405 None:intergenic 15.0%
!! TGTTACCATATTAAATAATA+TGG + chr5_1:5701423-5701442 Msa0713510:intron 15.0%
!! TAAGTGAACTTATATAATAT+TGG + chr5_1:5702044-5702063 Msa0713510:intron 15.0%
!!! TTTTAATGAAAATCTTTGAA+TGG + chr5_1:5702965-5702984 Msa0713510:CDS 15.0%
!! TTTAATGAAAATCTTTGAAT+GGG + chr5_1:5702966-5702985 Msa0713510:CDS 15.0%
!! CATGTTAAAAAATAAACAAA+AGG - chr5_1:5703796-5703815 None:intergenic 15.0%
!!! TTTTTTAACATGTTTTTTTC+AGG + chr5_1:5703804-5703823 Msa0713510:intron 15.0%
!! TATATGAAAATAATTTAACC+AGG - chr5_1:5704127-5704146 None:intergenic 15.0%
!!! GTTTTTCATTCATTATATTT+TGG + chr5_1:5705120-5705139 Msa0713510:three_prime_UTR 15.0%
!! TTATAATATTATTGCCTCTT+CGG + chr5_1:5697096-5697115 Msa0713510:intron 20.0%
!!! AACTATAAAGTTTTTTTGTC+GGG + chr5_1:5697358-5697377 Msa0713510:intron 20.0%
!! TAAAACAATTATAGCAACAA+CGG - chr5_1:5697459-5697478 None:intergenic 20.0%
!!! TTTAGTTTCTTTTGTTGTAT+CGG + chr5_1:5697475-5697494 Msa0713510:intron 20.0%
!!! TATAATATTAATGCCTTTTC+GGG + chr5_1:5697823-5697842 Msa0713510:intron 20.0%
!!! TATAATATTAATGCCTTTTC+GGG + chr5_1:5697823-5697842 Msa0713510:intron 20.0%
!!! TTATTATTTGTTGCTTTACA+GGG + chr5_1:5697952-5697971 Msa0713510:intron 20.0%
!! TAACTAATAATAAGGGAAAA+AGG + chr5_1:5698726-5698745 Msa0713510:intron 20.0%
!! AACTAATAATAAGGGAAAAA+GGG + chr5_1:5698727-5698746 Msa0713510:intron 20.0%
!!! TTTTTTTTGTTCTATCTTTC+TGG + chr5_1:5699044-5699063 Msa0713510:intron 20.0%
!!! AAGGTCTAAATATGTTTTTT+TGG + chr5_1:5699495-5699514 Msa0713510:intron 20.0%
!! AATATACCACTTATTGTTTA+TGG + chr5_1:5699579-5699598 Msa0713510:intron 20.0%
!! AAGCAAACAAAAAAATGTAT+AGG + chr5_1:5700066-5700085 Msa0713510:intron 20.0%
!! AGCAAACAAAAAAATGTATA+GGG + chr5_1:5700067-5700086 Msa0713510:intron 20.0%
!! GTTGTAAAATTGTAATAGAA+TGG - chr5_1:5701034-5701053 None:intergenic 20.0%
!! TTTACAACATTGTATATTAC+AGG + chr5_1:5701046-5701065 Msa0713510:intron 20.0%
!!! ATGATAAATACCTTTTAGTA+GGG - chr5_1:5701321-5701340 None:intergenic 20.0%
!!! TGTTGTTTAAAGTAGATTAT+TGG - chr5_1:5702015-5702034 None:intergenic 20.0%
!!! TTCAGTTATAGTTTTGATTA+TGG + chr5_1:5702831-5702850 Msa0713510:intron 20.0%
!!! TTATGGTTTTTTTTTTCTTC+TGG + chr5_1:5702848-5702867 Msa0713510:intron 20.0%
!!! TTTTTTTCTTCTGGAAATTT+AGG + chr5_1:5702857-5702876 Msa0713510:intron 20.0%
!!! TTTTTTCTTCTGGAAATTTA+GGG + chr5_1:5702858-5702877 Msa0713510:intron 20.0%
!! TCATTAAAAAATAAGCCATT+TGG - chr5_1:5702954-5702973 None:intergenic 20.0%
!!! TTTTTTTTTCCTTTCTGAAT+TGG - chr5_1:5703057-5703076 None:intergenic 20.0%
!! TAAATAAATTAAACAAGTCC+AGG - chr5_1:5703205-5703224 None:intergenic 20.0%
!!! TGTATAGTTTTCATGAATAA+AGG - chr5_1:5703245-5703264 None:intergenic 20.0%
!! GAAAATAATCTAACAACAAA+GGG - chr5_1:5703418-5703437 None:intergenic 20.0%
!! AGAAAATAATCTAACAACAA+AGG - chr5_1:5703419-5703438 None:intergenic 20.0%
!! AGGATCAAATTAATTCTTAA+TGG + chr5_1:5703581-5703600 Msa0713510:intron 20.0%
!!! ATTATTTTAGCCAAAAAAAC+TGG - chr5_1:5703609-5703628 None:intergenic 20.0%
!! AAATAAACAAAAGGAACAAT+TGG - chr5_1:5703787-5703806 None:intergenic 20.0%
!! ATGATTTCTATGTGAAATAA+AGG + chr5_1:5703988-5704007 Msa0713510:intron 20.0%
!!! ATAAAAACAACTTAATTTGC+AGG + chr5_1:5704195-5704214 Msa0713510:intron 20.0%
!!! ATGTTTCATCTTATTTTCAT+GGG - chr5_1:5704361-5704380 None:intergenic 20.0%
!! GCATTAAATAGAAATAAGAT+AGG - chr5_1:5704757-5704776 None:intergenic 20.0%
!!! ATCTTATTTCTATTTAATGC+AGG + chr5_1:5704757-5704776 Msa0713510:intron 20.0%
!! ATGCAATCTCAAATAATTAA+AGG + chr5_1:5705044-5705063 Msa0713510:three_prime_UTR 20.0%
!! AAAAAAAAAACTGCAACAAA+GGG - chr5_1:5705089-5705108 None:intergenic 20.0%
!! TAAAAAAAAAACTGCAACAA+AGG - chr5_1:5705090-5705109 None:intergenic 20.0%
!!! TTGTTGCAGTTTTTTTTTTA+AGG + chr5_1:5705090-5705109 Msa0713510:three_prime_UTR 20.0%
!! TATGTATTGTAATTGTCATA+TGG - chr5_1:5705302-5705321 None:intergenic 20.0%
!! GCTTATATTTATATCTAACA+TGG + chr5_1:5705333-5705352 Msa0713510:intron 20.0%
!! GAAGAATAATTTGTGCTTAT+AGG + chr5_1:5696954-5696973 Msa0713510:intron 25.0%
! TATAATATTATTGCCTCTTC+GGG + chr5_1:5697097-5697116 Msa0713510:intron 25.0%
! CCAAATTATAAAATTCCAGT+GGG - chr5_1:5697243-5697262 None:intergenic 25.0%
!!! TCTTGCCGTTAATTTTTTAA+CGG + chr5_1:5697283-5697302 Msa0713510:intron 25.0%
!!! AAAAAGTATCGTTCTTTTGT+TGG + chr5_1:5697526-5697545 Msa0713510:intron 25.0%
! ACAAATGAGAATTTATTAGG+AGG + chr5_1:5697625-5697644 Msa0713510:intron 25.0%
! CAAATGAGAATTTATTAGGA+GGG + chr5_1:5697626-5697645 Msa0713510:intron 25.0%
! AAATGAGAATTTATTAGGAG+GGG + chr5_1:5697627-5697646 Msa0713510:intron 25.0%
! TTATAAAGTGAAGGTGAAAA+TGG + chr5_1:5697663-5697682 Msa0713510:intron 25.0%
! TATAAAGTGAAGGTGAAAAT+GGG + chr5_1:5697664-5697683 Msa0713510:intron 25.0%
!!! GTTATTATTTGTTGCTTTAC+AGG + chr5_1:5697951-5697970 Msa0713510:intron 25.0%
!!! TATTATTTGTTGCTTTACAG+GGG + chr5_1:5697953-5697972 Msa0713510:intron 25.0%
! AATGAATCATCATGATGTAA+TGG - chr5_1:5698203-5698222 None:intergenic 25.0%
!!! GTATGTCTTATTTTCTTTGA+AGG + chr5_1:5698365-5698384 Msa0713510:intron 25.0%
!! GCACTATTCAAATCATATTT+TGG + chr5_1:5698393-5698412 Msa0713510:CDS 25.0%
!!! CTATTCAAATCATATTTTGG+TGG + chr5_1:5698396-5698415 Msa0713510:CDS 25.0%
! ATTTACATATGTGAAAGTGA+TGG + chr5_1:5698668-5698687 Msa0713510:intron 25.0%
! CAAAAAAAAAAATCATCCCA+AGG - chr5_1:5699033-5699052 None:intergenic 25.0%
!!! TTCTGGTTTGCATAAAAAAT+TGG + chr5_1:5699061-5699080 Msa0713510:intron 25.0%
!! TCTGGTTTGCATAAAAAATT+GGG + chr5_1:5699062-5699081 Msa0713510:intron 25.0%
! TATGAAATACAACACACATA+TGG + chr5_1:5699162-5699181 Msa0713510:intron 25.0%
! TGTGCTTGTTCAAAAAAAAA+CGG - chr5_1:5699190-5699209 None:intergenic 25.0%
!!! TTTTTTTGAACAAGCACATA+TGG + chr5_1:5699192-5699211 Msa0713510:intron 25.0%
! AAACGTAATAGTTTACAAGA+GGG - chr5_1:5699292-5699311 None:intergenic 25.0%
! TAAACGTAATAGTTTACAAG+AGG - chr5_1:5699293-5699312 None:intergenic 25.0%
!!! GATATAACTTAGTTTGTAAC+AGG - chr5_1:5699391-5699410 None:intergenic 25.0%
! TGGAATTATGACTATCATTT+CGG - chr5_1:5699430-5699449 None:intergenic 25.0%
! GAATTTAATGTAAACTACCT+TGG + chr5_1:5699461-5699480 Msa0713510:intron 25.0%
! TACCTTGGTTAAAATAGATA+AGG + chr5_1:5699476-5699495 Msa0713510:intron 25.0%
!!! TAAGCAAAGAATTTTTTGCA+AGG - chr5_1:5699550-5699569 None:intergenic 25.0%
! CAATAAGTGGTATATTTGTA+AGG - chr5_1:5699575-5699594 None:intergenic 25.0%
!! TAGTCTCTCAGATTTTATAT+TGG + chr5_1:5699619-5699638 Msa0713510:intron 25.0%
!! AGTCTCTCAGATTTTATATT+GGG + chr5_1:5699620-5699639 Msa0713510:intron 25.0%
! CAAATTCTCTACATATTACA+GGG - chr5_1:5699891-5699910 None:intergenic 25.0%
! TCAAATTCTCTACATATTAC+AGG - chr5_1:5699892-5699911 None:intergenic 25.0%
!!! AAATTTGTTCGAGTTGAAAT+TGG - chr5_1:5699983-5700002 None:intergenic 25.0%
! TAAAAAGCGATATATTTGCA+AGG + chr5_1:5700038-5700057 Msa0713510:intron 25.0%
! CAAAAAATGGTATATTTGCA+TGG + chr5_1:5700098-5700117 Msa0713510:intron 25.0%
!!! TATTGGCTTAAATATGTTGT+TGG - chr5_1:5700125-5700144 None:intergenic 25.0%
! GTTGTCACAAAAACAATAAA+TGG - chr5_1:5700358-5700377 None:intergenic 25.0%
! TTATCATTTGAATCATTGGA+TGG + chr5_1:5700382-5700401 Msa0713510:intron 25.0%
! TATCATTTGAATCATTGGAT+GGG + chr5_1:5700383-5700402 Msa0713510:intron 25.0%
!!! ATATAAAGCTTTAAGATCTC+CGG - chr5_1:5700475-5700494 None:intergenic 25.0%
!! AAGCTTTATATTACTCAAGA+AGG + chr5_1:5700484-5700503 Msa0713510:CDS 25.0%
! AATACCTTAAAATAAGGACA+TGG + chr5_1:5700555-5700574 Msa0713510:intron 25.0%
!!! TTTTTTTTAAAAGGGAACCT+TGG + chr5_1:5700625-5700644 Msa0713510:intron 25.0%
!!! GTGCGTATTATTTTGAAATT+TGG - chr5_1:5700680-5700699 None:intergenic 25.0%
!!! TGTCTGCAATTCATTTTTAT+TGG + chr5_1:5700712-5700731 Msa0713510:intron 25.0%
!!! GTCTGCAATTCATTTTTATT+GGG + chr5_1:5700713-5700732 Msa0713510:intron 25.0%
!!! TCTGCAATTCATTTTTATTG+GGG + chr5_1:5700714-5700733 Msa0713510:intron 25.0%
! AAAGGAAATAAAGGACTTAA+TGG - chr5_1:5700850-5700869 None:intergenic 25.0%
! CGCATTAATAAAGGAAATAA+AGG - chr5_1:5700859-5700878 None:intergenic 25.0%
! TCATAAAGAATGATATCAGA+TGG - chr5_1:5701005-5701024 None:intergenic 25.0%
!! GATGATAAATACCTTTTAGT+AGG - chr5_1:5701322-5701341 None:intergenic 25.0%
!!! ACTAAAAGGTATTTATCATC+TGG + chr5_1:5701322-5701341 Msa0713510:intron 25.0%
! ATGTCAAAGGAAAATTTCAT+CGG - chr5_1:5701373-5701392 None:intergenic 25.0%
! AGCAGCCATATTATTTAATA+TGG - chr5_1:5701431-5701450 None:intergenic 25.0%
! AATATTAGAGCAAACAAAAC+GGG - chr5_1:5701520-5701539 None:intergenic 25.0%
! GAATATTAGAGCAAACAAAA+CGG - chr5_1:5701521-5701540 None:intergenic 25.0%
! TTACTAGCAAATGGTTTAAA+GGG - chr5_1:5701821-5701840 None:intergenic 25.0%
! TTGAAATAGTTACTAGCAAA+TGG - chr5_1:5701830-5701849 None:intergenic 25.0%
! CAAAAAAAAAACAGAGAACT+GGG - chr5_1:5702090-5702109 None:intergenic 25.0%
!!! TGTTTTTTTTTTGGTCAAGT+AGG + chr5_1:5702097-5702116 Msa0713510:intron 25.0%
!!! ACTTTTTAAGGTGAATACAT+GGG + chr5_1:5702140-5702159 Msa0713510:intron 25.0%
! ACAATGCATTATAATATGCA+GGG - chr5_1:5702189-5702208 None:intergenic 25.0%
! ATGGGTATAACTTGATAAAA+TGG - chr5_1:5702322-5702341 None:intergenic 25.0%
! AGGAGATTATTAAGAAACAT+GGG - chr5_1:5702524-5702543 None:intergenic 25.0%
!!! TAAGGAAAAAAGAGTTTTAG+AGG - chr5_1:5702544-5702563 None:intergenic 25.0%
!!! TACTGGATTTTAGAAATTCT+GGG - chr5_1:5702686-5702705 None:intergenic 25.0%
!!! TTACTGGATTTTAGAAATTC+TGG - chr5_1:5702687-5702706 None:intergenic 25.0%
!!! TTTTTCTTCTGGAAATTTAG+GGG + chr5_1:5702859-5702878 Msa0713510:intron 25.0%
!!! AGATAACTATGGATTTTTTC+TGG + chr5_1:5702918-5702937 Msa0713510:CDS 25.0%
!!! GATAACTATGGATTTTTTCT+GGG + chr5_1:5702919-5702938 Msa0713510:CDS 25.0%
!!! TAGGATATTTTGGTATCAAT+TGG + chr5_1:5703324-5703343 Msa0713510:intron 25.0%
! AAAACAAAATATTTCCCACT+TGG - chr5_1:5703369-5703388 None:intergenic 25.0%
! ACACAAATCACAAGTAATAT+AGG + chr5_1:5703561-5703580 Msa0713510:intron 25.0%
!!! GATGTTTCATCTTATTTTCA+TGG - chr5_1:5704362-5704381 None:intergenic 25.0%
! TATGTTATTGAGTGAAATTC+TGG + chr5_1:5704471-5704490 Msa0713510:intron 25.0%
! TACTTCAAAAAATTTGCCTA+CGG - chr5_1:5704664-5704683 None:intergenic 25.0%
! TTATCTAATTTACTCTCTGA+AGG + chr5_1:5704891-5704910 Msa0713510:intron 25.0%
!!! CAGTTTTTTTTTTAAGGTTG+AGG + chr5_1:5705096-5705115 Msa0713510:three_prime_UTR 25.0%
! TTATGTTTCCATTAACAAGA+TGG - chr5_1:5705183-5705202 None:intergenic 25.0%
! AATACAATACAATGTGTACA+GGG - chr5_1:5705224-5705243 None:intergenic 25.0%
! AAATACAATACAATGTGTAC+AGG - chr5_1:5705225-5705244 None:intergenic 25.0%
! AATTACAATACATACAGTCT+TGG + chr5_1:5705308-5705327 Msa0713510:intron 25.0%
! ATTACAATACATACAGTCTT+GGG + chr5_1:5705309-5705328 Msa0713510:intron 25.0%
! TAAAGGTGAAACTATAGTAA+CGG + chr5_1:5705401-5705420 Msa0713510:three_prime_UTR 25.0%
AGAGTGTGAAAACAAAGAAA+CGG - chr5_1:5696897-5696916 None:intergenic 30.0%
AGAATCTGAACTCAAAAACT+AGG - chr5_1:5696934-5696953 None:intergenic 30.0%
ATATTACCAGACAAATTCCA+GGG - chr5_1:5697126-5697145 None:intergenic 30.0%
! AGTTAAACTTGTAGCTTTAC+CGG + chr5_1:5697208-5697227 Msa0713510:intron 30.0%
! CCCACTGGAATTTTATAATT+TGG + chr5_1:5697240-5697259 Msa0713510:intron 30.0%
GCCAAATTATAAAATTCCAG+TGG - chr5_1:5697244-5697263 None:intergenic 30.0%
AAAAATTAACGGCAAGATCA+AGG - chr5_1:5697280-5697299 None:intergenic 30.0%
!!! CTTGCCGTTAATTTTTTAAC+GGG + chr5_1:5697284-5697303 Msa0713510:intron 30.0%
!!! TTGCCGTTAATTTTTTAACG+GGG + chr5_1:5697285-5697304 Msa0713510:intron 30.0%
CTTCCCCGTTAAAAAATTAA+CGG - chr5_1:5697291-5697310 None:intergenic 30.0%
AGTTAATGAACCTAACATTG+AGG + chr5_1:5697321-5697340 Msa0713510:intron 30.0%
ACTTTATAGTTAAAACCGGT+AGG - chr5_1:5697349-5697368 None:intergenic 30.0%
TAAACATTGCTACATAAACC+CGG - chr5_1:5697397-5697416 None:intergenic 30.0%
GTGTTTCGAACAAGAAAAAA+AGG - chr5_1:5697426-5697445 None:intergenic 30.0%
ATTATAGCAACAACGGAAAA+GGG - chr5_1:5697452-5697471 None:intergenic 30.0%
AATTATAGCAACAACGGAAA+AGG - chr5_1:5697453-5697472 None:intergenic 30.0%
! TTTTGTTGGAAAATCCATAC+AGG + chr5_1:5697540-5697559 Msa0713510:intron 30.0%
AATGAGAATTTATTAGGAGG+GGG + chr5_1:5697628-5697647 Msa0713510:intron 30.0%
TGAGTCAGAAATTGAAACAT+TGG + chr5_1:5697756-5697775 Msa0713510:intron 30.0%
GAGTCAGAAATTGAAACATT+GGG + chr5_1:5697757-5697776 Msa0713510:intron 30.0%
! TTTGTTGATTGAGTTGTTAG+AGG + chr5_1:5697891-5697910 Msa0713510:intron 30.0%
!! GAAATATGGTTGATGCTTTT+CGG + chr5_1:5697975-5697994 Msa0713510:CDS 30.0%
ATAATGCAAACGAAAGAACT+TGG + chr5_1:5698004-5698023 Msa0713510:CDS 30.0%
! ATTGCCATTTATCTGATGTT+TGG + chr5_1:5698171-5698190 Msa0713510:intron 30.0%
AAAGCCAAACATCAGATAAA+TGG - chr5_1:5698178-5698197 None:intergenic 30.0%
TAAAACCAAACATTCTCCTT+GGG + chr5_1:5699014-5699033 Msa0713510:intron 30.0%
! TTTTGCACAGTTTATTGAAC+TGG + chr5_1:5699242-5699261 Msa0713510:intron 30.0%
TTTGCACAGTTTATTGAACT+GGG + chr5_1:5699243-5699262 Msa0713510:intron 30.0%
ATTAAATTCCTTAGAGCTGA+TGG - chr5_1:5699450-5699469 None:intergenic 30.0%
!!! GACCTTATCTATTTTAACCA+AGG - chr5_1:5699481-5699500 None:intergenic 30.0%
AAACAAGTGTGATATTTGCA+GGG - chr5_1:5699522-5699541 None:intergenic 30.0%
AAAACAAGTGTGATATTTGC+AGG - chr5_1:5699523-5699542 None:intergenic 30.0%
CAAGAACCATAAACAATAAG+TGG - chr5_1:5699588-5699607 None:intergenic 30.0%
GTGTAGTGTTTATAAAGCAT+GGG - chr5_1:5699688-5699707 None:intergenic 30.0%
TGTGTAGTGTTTATAAAGCA+TGG - chr5_1:5699689-5699708 None:intergenic 30.0%
! CAACTCGAACAAATTTTACA+TGG + chr5_1:5699987-5700006 Msa0713510:intron 30.0%
CAGTTTCATTTCAAATACAC+AGG - chr5_1:5700193-5700212 None:intergenic 30.0%
ACATGTATTTGCAGAAATCA+TGG + chr5_1:5700423-5700442 Msa0713510:intron 30.0%
TTATCCACAAAATCTTTCAC+CGG + chr5_1:5700453-5700472 Msa0713510:CDS 30.0%
! GGTAAATATTTTACTCTCCA+AGG - chr5_1:5700645-5700664 None:intergenic 30.0%
GAAATTTGGTACATATCAGT+AGG - chr5_1:5700666-5700685 None:intergenic 30.0%
!! CTGCAATTCATTTTTATTGG+GGG + chr5_1:5700715-5700734 Msa0713510:intron 30.0%
!! AATTCATTTTTATTGGGGGA+GGG + chr5_1:5700719-5700738 Msa0713510:intron 30.0%
CGTTATGTATCTCAAGTTAT+TGG + chr5_1:5700764-5700783 Msa0713510:intron 30.0%
AATCTTCTTATGTCGTCAAA+AGG + chr5_1:5701095-5701114 Msa0713510:CDS 30.0%
AAAACCATAAAACAGTTAGC+AGG - chr5_1:5701169-5701188 None:intergenic 30.0%
! GCTAACTGTTTTATGGTTTT+AGG + chr5_1:5701169-5701188 Msa0713510:intron 30.0%
TTGGGTTTGAATGATAAGAT+TGG + chr5_1:5701265-5701284 Msa0713510:CDS 30.0%
TGTCAAAGGAAAATTTCATC+GGG - chr5_1:5701372-5701391 None:intergenic 30.0%
!! ACTTTCTCATTTTTCCAACT+TGG + chr5_1:5701457-5701476 Msa0713510:intron 30.0%
! TCAACAAATCTATTTTGCAG+TGG + chr5_1:5701555-5701574 Msa0713510:intron 30.0%
TCGTCAAATTTACACATTGA+TGG - chr5_1:5701611-5701630 None:intergenic 30.0%
ATCAATGTGTAAATTTGACG+AGG + chr5_1:5701610-5701629 Msa0713510:CDS 30.0%
TTGACAAAACAAGAATCAAC+AGG - chr5_1:5701706-5701725 None:intergenic 30.0%
! AGGTATGCATGTGATATTTT+TGG - chr5_1:5701745-5701764 None:intergenic 30.0%
TACTAGCAAATGGTTTAAAG+GGG - chr5_1:5701820-5701839 None:intergenic 30.0%
GTTACTAGCAAATGGTTTAA+AGG - chr5_1:5701822-5701841 None:intergenic 30.0%
!!! CTTCTGTTGACTTTTGTATT+AGG + chr5_1:5701864-5701883 Msa0713510:intron 30.0%
ATGAAGATCTACCATGAAAT+AGG - chr5_1:5701900-5701919 None:intergenic 30.0%
CCAAAAAAAAAACAGAGAAC+TGG - chr5_1:5702091-5702110 None:intergenic 30.0%
!!! CCAGTTCTCTGTTTTTTTTT+TGG + chr5_1:5702088-5702107 Msa0713510:intron 30.0%
!!! TGGCTAGAATTCACTTTTTA+AGG + chr5_1:5702128-5702147 Msa0713510:intron 30.0%
!!! CACTTTTTAAGGTGAATACA+TGG + chr5_1:5702139-5702158 Msa0713510:intron 30.0%
!!! CTTTTTAAGGTGAATACATG+GGG + chr5_1:5702141-5702160 Msa0713510:intron 30.0%
CAATGCATTATAATATGCAG+GGG - chr5_1:5702188-5702207 None:intergenic 30.0%
GACAATGCATTATAATATGC+AGG - chr5_1:5702190-5702209 None:intergenic 30.0%
AGATTATTAAGAAACATGGG+GGG - chr5_1:5702521-5702540 None:intergenic 30.0%
GAGATTATTAAGAAACATGG+GGG - chr5_1:5702522-5702541 None:intergenic 30.0%
GGAGATTATTAAGAAACATG+GGG - chr5_1:5702523-5702542 None:intergenic 30.0%
GAGGAGATTATTAAGAAACA+TGG - chr5_1:5702525-5702544 None:intergenic 30.0%
AGAAAGTAACAGAGAACTTT+GGG - chr5_1:5702712-5702731 None:intergenic 30.0%
AAGAAAGTAACAGAGAACTT+TGG - chr5_1:5702713-5702732 None:intergenic 30.0%
! ATGGTTTGTGACTTTGATTT+GGG + chr5_1:5702794-5702813 Msa0713510:intron 30.0%
TTTCAATGACATATTGGAGA+AGG + chr5_1:5702891-5702910 Msa0713510:CDS 30.0%
GAGAAGGAAAAAGATAACTA+TGG + chr5_1:5702907-5702926 Msa0713510:CDS 30.0%
TAAAAAATAAGCCATTTGGC+CGG - chr5_1:5702950-5702969 None:intergenic 30.0%
TGAACAGAAAAAAGAATTCC+AGG - chr5_1:5703167-5703186 None:intergenic 30.0%
CTTTATCAATTTGCATTGCT+TGG + chr5_1:5703534-5703553 Msa0713510:intron 30.0%
TTGTAAGTCAAATCGAATGA+AGG + chr5_1:5703750-5703769 Msa0713510:intron 30.0%
TAAACAAAAGGAACAATTGG+AGG - chr5_1:5703784-5703803 None:intergenic 30.0%
! CAGCTATTGATTGTTTAGTT+TGG + chr5_1:5703944-5703963 Msa0713510:CDS 30.0%
GAAATAAAGGTCATCGAAAT+TGG + chr5_1:5704001-5704020 Msa0713510:intron 30.0%
CTATAATCAAACAGATAACC+TGG + chr5_1:5704106-5704125 Msa0713510:intron 30.0%
CAAATACTTATACGGTAATC+AGG - chr5_1:5704384-5704403 None:intergenic 30.0%
TACCGTATAAGTATTTGTGA+AGG + chr5_1:5704387-5704406 Msa0713510:intron 30.0%
AGCCTTCACAAATACTTATA+CGG - chr5_1:5704392-5704411 None:intergenic 30.0%
GGCTTATTCATGAAATTTGA+TGG + chr5_1:5704408-5704427 Msa0713510:intron 30.0%
ATTGAGTGAAATTCTGGATT+AGG + chr5_1:5704477-5704496 Msa0713510:intron 30.0%
! AAATCTGATGATGAATACAC+AGG - chr5_1:5704504-5704523 None:intergenic 30.0%
!!! ATCCTTTTTCAAATGCCTTT+TGG + chr5_1:5704608-5704627 Msa0713510:intron 30.0%
!!! TCCTTTTTCAAATGCCTTTT+GGG + chr5_1:5704609-5704628 Msa0713510:intron 30.0%
ATACAATACAATGTGTACAG+GGG - chr5_1:5705223-5705242 None:intergenic 30.0%
TTTATCATCTTTCTGTTGAG+AGG - chr5_1:5705385-5705404 None:intergenic 30.0%
TCTCAACAGAAAGATGATAA+AGG + chr5_1:5705384-5705403 Msa0713510:three_prime_UTR 30.0%
!! GAAATTGGAAGTTGATACAC+TGG + chr5_1:5696707-5696726 Msa0713510:five_prime_UTR 35.0%
!! CATTTTAGTGTAATGCAGCT+AGG + chr5_1:5697067-5697086 Msa0713510:intron 35.0%
CATATTACCAGACAAATTCC+AGG - chr5_1:5697127-5697146 None:intergenic 35.0%
GAATTTGTCTGGTAATATGC+AGG + chr5_1:5697128-5697147 Msa0713510:intron 35.0%
ATGCAGGAGAATATGTTTAC+CGG + chr5_1:5697144-5697163 Msa0713510:intron 35.0%
AGTCCATGAAGTAACATTAC+CGG - chr5_1:5697178-5697197 None:intergenic 35.0%
TTCCAGTGGGAAAATTAAAC+CGG - chr5_1:5697230-5697249 None:intergenic 35.0%
!!! TTTTTTAACGGGGAAGATTC+CGG + chr5_1:5697295-5697314 Msa0713510:intron 35.0%
!!! AGTTTTTTTGTCGGGTCTAA+TGG + chr5_1:5697366-5697385 Msa0713510:intron 35.0%
!!! GTTTTTTTGTCGGGTCTAAT+GGG + chr5_1:5697367-5697386 Msa0713510:intron 35.0%
AAACATTGCTACATAAACCC+GGG - chr5_1:5697396-5697415 None:intergenic 35.0%
TCAAACACAGATTCTGTATC+AGG - chr5_1:5697739-5697758 None:intergenic 35.0%
AAGTATAAGTGTTCCCGAAA+AGG - chr5_1:5697839-5697858 None:intergenic 35.0%
! GATGCTCTTTCTTTTACATG+AGG + chr5_1:5698053-5698072 Msa0713510:CDS 35.0%
CTCAGATAGATTACAAAGGA+TGG - chr5_1:5698237-5698256 None:intergenic 35.0%
TCGTCTCAGATAGATTACAA+AGG - chr5_1:5698241-5698260 None:intergenic 35.0%
! TTGTAATCTATCTGAGACGA+AGG + chr5_1:5698241-5698260 Msa0713510:intron 35.0%
TGCATCTTATTCTTGATGCT+CGG + chr5_1:5698302-5698321 Msa0713510:intron 35.0%
AATGCCAGACAGTTATGAAT+AGG + chr5_1:5698820-5698839 Msa0713510:intron 35.0%
ATCTCCTATTCATAACTGTC+TGG - chr5_1:5698827-5698846 None:intergenic 35.0%
AGACAGTTATGAATAGGAGA+TGG + chr5_1:5698826-5698845 Msa0713510:intron 35.0%
GACAGTTATGAATAGGAGAT+GGG + chr5_1:5698827-5698846 Msa0713510:intron 35.0%
ACAGTTATGAATAGGAGATG+GGG + chr5_1:5698828-5698847 Msa0713510:intron 35.0%
!!! ATGGGGTATTTTGGAATCAT+GGG + chr5_1:5698845-5698864 Msa0713510:intron 35.0%
GTAAAACCAAACATTCTCCT+TGG + chr5_1:5699013-5699032 Msa0713510:intron 35.0%
AATTGGGTACTTATACGAAG+AGG + chr5_1:5699078-5699097 Msa0713510:intron 35.0%
ATTGGGTACTTATACGAAGA+GGG + chr5_1:5699079-5699098 Msa0713510:intron 35.0%
TTGTAGTTGACAGAAACTCT+AGG + chr5_1:5699315-5699334 Msa0713510:intron 35.0%
! AGAAACTCTAGGTTAGCTAA+GGG + chr5_1:5699326-5699345 Msa0713510:intron 35.0%
TCATAATTCCATCAGCTCTA+AGG + chr5_1:5699439-5699458 Msa0713510:intron 35.0%
TCACACATTGCTTAGAGATA+TGG - chr5_1:5699714-5699733 None:intergenic 35.0%
AGGGACTATGTTGCAAATTT+CGG - chr5_1:5699841-5699860 None:intergenic 35.0%
!! TGATTTTAGTCCCTCCAATA+TGG + chr5_1:5699909-5699928 Msa0713510:intron 35.0%
!! GATTTTAGTCCCTCCAATAT+GGG + chr5_1:5699910-5699929 Msa0713510:intron 35.0%
TAGGGACTAGAAGCAAAAAA+TGG + chr5_1:5700085-5700104 Msa0713510:intron 35.0%
AAGCCAATAGATAATAACCC+AGG + chr5_1:5700136-5700155 Msa0713510:intron 35.0%
AGCCAATAGATAATAACCCA+GGG + chr5_1:5700137-5700156 Msa0713510:intron 35.0%
TTCCCTGGGTTATTATCTAT+TGG - chr5_1:5700142-5700161 None:intergenic 35.0%
CATCTATCTATTCTGCTAAC+AGG + chr5_1:5700259-5700278 Msa0713510:intron 35.0%
CATCTATCTATTCTGCTAAC+AGG + chr5_1:5700259-5700278 Msa0713510:intron 35.0%
TTTGCAGAAATCATGGACTT+TGG + chr5_1:5700430-5700449 Msa0713510:intron 35.0%
AACCAACCTTGGATGAAAAA+GGG - chr5_1:5700519-5700538 None:intergenic 35.0%
AAACCAACCTTGGATGAAAA+AGG - chr5_1:5700520-5700539 None:intergenic 35.0%
ATAGGACACAATCATGTTCA+TGG + chr5_1:5700589-5700608 Msa0713510:intron 35.0%
!! CAATTCATTTTTATTGGGGG+AGG + chr5_1:5700718-5700737 Msa0713510:intron 35.0%
!! ATTCATTTTTATTGGGGGAG+GGG + chr5_1:5700720-5700739 Msa0713510:intron 35.0%
CATAACGAACAGATATCAGT+GGG - chr5_1:5700751-5700770 None:intergenic 35.0%
ACATAACGAACAGATATCAG+TGG - chr5_1:5700752-5700771 None:intergenic 35.0%
TCCTTTATTAATGCGTGCAA+TGG + chr5_1:5700864-5700883 Msa0713510:intron 35.0%
ACCATTGCACGCATTAATAA+AGG - chr5_1:5700868-5700887 None:intergenic 35.0%
TTATTAATGCGTGCAATGGT+TGG + chr5_1:5700868-5700887 Msa0713510:intron 35.0%
TATTAATGCGTGCAATGGTT+GGG + chr5_1:5700869-5700888 Msa0713510:intron 35.0%
! CCTCGTTCTTTTTGTATACA+AGG - chr5_1:5700971-5700990 None:intergenic 35.0%
CCTTGTATACAAAAAGAACG+AGG + chr5_1:5700968-5700987 Msa0713510:CDS 35.0%
TGTATACAAAAAGAACGAGG+TGG + chr5_1:5700971-5700990 Msa0713510:intron 35.0%
AAACAGCAACATGCAATCAA+AGG - chr5_1:5701137-5701156 None:intergenic 35.0%
! ATTGCCTGCTAACTGTTTTA+TGG + chr5_1:5701162-5701181 Msa0713510:intron 35.0%
! CTTATGAAGTGCTTTCTATC+TGG + chr5_1:5701226-5701245 Msa0713510:CDS 35.0%
TTCAAACCCAACTTCAAATC+AGG - chr5_1:5701256-5701275 None:intergenic 35.0%
TAAGTTGTGACTCTTTCTCA+AGG - chr5_1:5701291-5701310 None:intergenic 35.0%
TTAAATCACGCCCTACTAAA+AGG + chr5_1:5701308-5701327 Msa0713510:CDS 35.0%
! TCCTTTTAACATGCTGTACT+GGG + chr5_1:5701480-5701499 Msa0713510:intron 35.0%
AAATTTGACGAGGTTCAACT+CGG + chr5_1:5701620-5701639 Msa0713510:CDS 35.0%
ATCAGTTCAAATTCACCATC+TGG - chr5_1:5701669-5701688 None:intergenic 35.0%
!!! GCATGTGATATTTTTGGTGT+AGG - chr5_1:5701739-5701758 None:intergenic 35.0%
TATCACATGCATACCTTTGT+AGG + chr5_1:5701749-5701768 Msa0713510:intron 35.0%
TGCATACCTTTGTAGGAAAT+AGG + chr5_1:5701756-5701775 Msa0713510:intron 35.0%
ACTTGTCCTATTTCCTACAA+AGG - chr5_1:5701765-5701784 None:intergenic 35.0%
TTTGTAGGAAATAGGACAAG+TGG + chr5_1:5701764-5701783 Msa0713510:intron 35.0%
TTGTAGGAAATAGGACAAGT+GGG + chr5_1:5701765-5701784 Msa0713510:intron 35.0%
ACTAGCAAATGGTTTAAAGG+GGG - chr5_1:5701819-5701838 None:intergenic 35.0%
TACAAAAGTCAACAGAAGCT+CGG - chr5_1:5701862-5701881 None:intergenic 35.0%
GCACTTGATATCCTATTTCA+TGG + chr5_1:5701886-5701905 Msa0713510:intron 35.0%
ATGGAACAAAGCTCTTTCAA+AGG - chr5_1:5701982-5702001 None:intergenic 35.0%
! GATTATTGGAGTGTCTTAGA+TGG - chr5_1:5702001-5702020 None:intergenic 35.0%
!!! TTTTTTTTGGTCAAGTAGGC+TGG + chr5_1:5702101-5702120 Msa0713510:intron 35.0%
! CCTTGGTAATATAGAGAACT+GGG - chr5_1:5702245-5702264 None:intergenic 35.0%
! TCCTTGGTAATATAGAGAAC+TGG - chr5_1:5702246-5702265 None:intergenic 35.0%
! TTCATTGGTGATCCTACTTA+TGG + chr5_1:5702284-5702303 Msa0713510:intron 35.0%
! TCATTGGTGATCCTACTTAT+GGG + chr5_1:5702285-5702304 Msa0713510:intron 35.0%
AGAACTAGATACCCATAAGT+AGG - chr5_1:5702299-5702318 None:intergenic 35.0%
GTATGTCAACTTCTTAGGAT+GGG - chr5_1:5702340-5702359 None:intergenic 35.0%
TGTATGTCAACTTCTTAGGA+TGG - chr5_1:5702341-5702360 None:intergenic 35.0%
GCAATGTATGTCAACTTCTT+AGG - chr5_1:5702345-5702364 None:intergenic 35.0%
TGACATAACTCCCGTTATTA+GGG + chr5_1:5702477-5702496 Msa0713510:intron 35.0%
ATTATTAAGAAACATGGGGG+GGG - chr5_1:5702519-5702538 None:intergenic 35.0%
GATTATTAAGAAACATGGGG+GGG - chr5_1:5702520-5702539 None:intergenic 35.0%
CGTATGTGTAACTAGCTAAA+GGG - chr5_1:5702641-5702660 None:intergenic 35.0%
ACGTATGTGTAACTAGCTAA+AGG - chr5_1:5702642-5702661 None:intergenic 35.0%
! ATCCAAAGTTTGTTTGCTCT+TGG + chr5_1:5702736-5702755 Msa0713510:intron 35.0%
GAGATGAATATGCAATCTGA+TGG + chr5_1:5702775-5702794 Msa0713510:intron 35.0%
! GATGGTTTGTGACTTTGATT+TGG + chr5_1:5702793-5702812 Msa0713510:intron 35.0%
! TGGAAATTTAGGGGTTTTCT+GGG + chr5_1:5702868-5702887 Msa0713510:intron 35.0%
TCTGGGTTTCAATGACATAT+TGG + chr5_1:5702885-5702904 Msa0713510:CDS 35.0%
!!! GGATTTTTTCTGGGTTTATC+CGG + chr5_1:5702928-5702947 Msa0713510:CDS 35.0%
GACACATTGTAATAACCCAA+AGG + chr5_1:5703030-5703049 Msa0713510:intron 35.0%
TTAAGTTTGACCCATTTCCT+GGG - chr5_1:5703098-5703117 None:intergenic 35.0%
! TTTAAGTTTGACCCATTTCC+TGG - chr5_1:5703099-5703118 None:intergenic 35.0%
TCATTAACATGACTCGTGAT+AGG + chr5_1:5703305-5703324 Msa0713510:intron 35.0%
! TGACTCGTGATAGGATATTT+TGG + chr5_1:5703314-5703333 Msa0713510:intron 35.0%
! ATTTTATACCAACGCTCTCA+AGG - chr5_1:5703482-5703501 None:intergenic 35.0%
!!! CTTAATGGTGCCAGTTTTTT+TGG + chr5_1:5703596-5703615 Msa0713510:intron 35.0%
ATGGTTGGCAATACTTTGAA+GGG - chr5_1:5703673-5703692 None:intergenic 35.0%
ACGGATGGAAGTAAATGTTA+AGG + chr5_1:5703711-5703730 Msa0713510:CDS 35.0%
!! TTTCAGGTAAAGAGTGTCTT+TGG + chr5_1:5703820-5703839 Msa0713510:intron 35.0%
!!! CTCGTTTTTGCTGTTTGTTT+CGG - chr5_1:5703889-5703908 None:intergenic 35.0%
! TGCATTATATTTTGCTCGAC+CGG - chr5_1:5703926-5703945 None:intergenic 35.0%
TGCAGGATAAGAAAATTTCC+TGG + chr5_1:5704212-5704231 Msa0713510:intron 35.0%
GCAGGATAAGAAAATTTCCT+GGG + chr5_1:5704213-5704232 Msa0713510:intron 35.0%
CGATGACTGAAAAGAAATCA+TGG + chr5_1:5704279-5704298 Msa0713510:CDS 35.0%
!!! TCTTCTGTTTTAGTTTGCAC+TGG + chr5_1:5704532-5704551 Msa0713510:intron 35.0%
TTCAAAAAATTTGCCTACGG+TGG - chr5_1:5704661-5704680 None:intergenic 35.0%
! TCTACGTGTTCGTTTTCTTA+AGG + chr5_1:5704802-5704821 Msa0713510:CDS 35.0%
!!! TGCATCTTTTTGAAACTCAG+TGG + chr5_1:5704866-5704885 Msa0713510:intron 35.0%
! TAATTTACTCTCTGAAGGTG+TGG + chr5_1:5704896-5704915 Msa0713510:intron 35.0%
! AATTTACTCTCTGAAGGTGT+GGG + chr5_1:5704897-5704916 Msa0713510:intron 35.0%
GTCAAACTTCAGGGATTAAT+TGG + chr5_1:5705012-5705031 Msa0713510:three_prime_UTR 35.0%
AAACTTCAGGGATTAATTGG+TGG + chr5_1:5705015-5705034 Msa0713510:three_prime_UTR 35.0%
! TTAAAGGTGCAGTTCAATCT+AGG + chr5_1:5705060-5705079 Msa0713510:three_prime_UTR 35.0%
TTCCAAAGCCATCTTGTTAA+TGG + chr5_1:5705172-5705191 Msa0713510:three_prime_UTR 35.0%
TTCCATTAACAAGATGGCTT+TGG - chr5_1:5705177-5705196 None:intergenic 35.0%
TTTGACAATACACCTCCCTT+TGG - chr5_1:5696505-5696524 None:intergenic 40.0%
TGAGAGTAGAAGAGAAGAAG+CGG - chr5_1:5696591-5696610 None:intergenic 40.0%
GGAAGAAGATCAATCGGAAA+CGG - chr5_1:5696668-5696687 None:intergenic 40.0%
GTTTCCGATTGATCTTCTTC+CGG + chr5_1:5696667-5696686 Msa0713510:five_prime_UTR 40.0%
TCAACTTCCAATTTCACCGA+CGG - chr5_1:5696702-5696721 None:intergenic 40.0%
!! TGGAAGTTGATACACTGGAT+CGG + chr5_1:5696712-5696731 Msa0713510:five_prime_UTR 40.0%
GAGGTTCAAGAAGTAAACAG+CGG - chr5_1:5696756-5696775 None:intergenic 40.0%
AAGATCTCTACTGGGAAAGA+GGG - chr5_1:5696848-5696867 None:intergenic 40.0%
CATCAGTGAAGATCTCTACT+GGG - chr5_1:5696856-5696875 None:intergenic 40.0%
TCATCAGTGAAGATCTCTAC+TGG - chr5_1:5696857-5696876 None:intergenic 40.0%
CGATTGAAGCGTGTATGTTA+TGG + chr5_1:5696996-5697015 Msa0713510:intron 40.0%
! TTCCCGGTAATGTTACTTCA+TGG + chr5_1:5697172-5697191 Msa0713510:intron 40.0%
GTCCATGAAGTAACATTACC+GGG - chr5_1:5697177-5697196 None:intergenic 40.0%
!!! TACCGGTTTAATTTTCCCAC+TGG + chr5_1:5697225-5697244 Msa0713510:intron 40.0%
GTTAGGTTCATTAACTCAGC+CGG - chr5_1:5697317-5697336 None:intergenic 40.0%
GGTTGTCATAAAAGCCTGTA+TGG - chr5_1:5697557-5697576 None:intergenic 40.0%
GAATTTATTAGGAGGGGGTT+CGG + chr5_1:5697633-5697652 Msa0713510:intron 40.0%
AATTTATTAGGAGGGGGTTC+GGG + chr5_1:5697634-5697653 Msa0713510:intron 40.0%
GAAAATGGGTCACATAGTTG+CGG + chr5_1:5697678-5697697 Msa0713510:intron 40.0%
! GTTGCTTTACAGGGGAAATA+TGG + chr5_1:5697961-5697980 Msa0713510:intron 40.0%
CTCATTTACGAGCTTCTAGA+TGG + chr5_1:5698456-5698475 Msa0713510:CDS 40.0%
TACCACTGAAAGCTAATGCA+AGG + chr5_1:5698549-5698568 Msa0713510:intron 40.0%
!! ATCCTTGCATTAGCTTTCAG+TGG - chr5_1:5698554-5698573 None:intergenic 40.0%
AATGCACCTTCCAGAATCAA+GGG - chr5_1:5698695-5698714 None:intergenic 40.0%
ACGAGTGGAGGAAAAATACT+GGG + chr5_1:5698750-5698769 Msa0713510:intron 40.0%
!! GAATAGGAGATGGGGTATTT+TGG + chr5_1:5698836-5698855 Msa0713510:intron 40.0%
!!! GATGGGGTATTTTGGAATCA+TGG + chr5_1:5698844-5698863 Msa0713510:intron 40.0%
!!! TATTTTGGAATCATGGGAGG+TGG + chr5_1:5698851-5698870 Msa0713510:intron 40.0%
ATCATCCCAAGGAGAATGTT+TGG - chr5_1:5699022-5699041 None:intergenic 40.0%
! CAGAAACTCTAGGTTAGCTA+AGG + chr5_1:5699325-5699344 Msa0713510:intron 40.0%
!! GGGTTTTGTAAGGATGAGTT+AGG - chr5_1:5699646-5699665 None:intergenic 40.0%
TTCATTGTGTTGGGTGTGAA+GGG - chr5_1:5699747-5699766 None:intergenic 40.0%
TCCAACACCTTCATTGTGTT+GGG - chr5_1:5699756-5699775 None:intergenic 40.0%
CTTATGTAGCCCATATTGGA+GGG - chr5_1:5699922-5699941 None:intergenic 40.0%
AGTCCTTATGTAGCCCATAT+TGG - chr5_1:5699926-5699945 None:intergenic 40.0%
!! GTTCGAGTTGAAATTGGTCT+CGG - chr5_1:5699977-5699996 None:intergenic 40.0%
! ATCTCCGGTGAAAGATTTTG+TGG - chr5_1:5700460-5700479 None:intergenic 40.0%
ACCAACCTTGGATGAAAAAG+GGG - chr5_1:5700518-5700537 None:intergenic 40.0%
!!! GCGACCATGTCCTTATTTTA+AGG - chr5_1:5700562-5700581 None:intergenic 40.0%
!! TTCATTTTTATTGGGGGAGG+GGG + chr5_1:5700721-5700740 Msa0713510:intron 40.0%
AAATGCGACGTTGCAAGTTA+CGG + chr5_1:5700920-5700939 Msa0713510:CDS 40.0%
ACAGGTGTTCCTAGATATTG+TGG + chr5_1:5701064-5701083 Msa0713510:intron 40.0%
TCACACTCTCCACAATATCT+AGG - chr5_1:5701076-5701095 None:intergenic 40.0%
! TGGAATGCCTGATTTGAAGT+TGG + chr5_1:5701246-5701265 Msa0713510:CDS 40.0%
! GGAATGCCTGATTTGAAGTT+GGG + chr5_1:5701247-5701266 Msa0713510:CDS 40.0%
TTCATCGGGAGGAAAAATGT+GGG - chr5_1:5701358-5701377 None:intergenic 40.0%
TTTCATCGGGAGGAAAAATG+TGG - chr5_1:5701359-5701378 None:intergenic 40.0%
CAAAGGAAAATTTCATCGGG+AGG - chr5_1:5701369-5701388 None:intergenic 40.0%
GCATGTTAAAAGGACCAAGT+TGG - chr5_1:5701474-5701493 None:intergenic 40.0%
! GTCCTTTTAACATGCTGTAC+TGG + chr5_1:5701479-5701498 Msa0713510:intron 40.0%
TCCCAGTACAGCATGTTAAA+AGG - chr5_1:5701484-5701503 None:intergenic 40.0%
ATTAGAGCAAACAAAACGGG+AGG - chr5_1:5701517-5701536 None:intergenic 40.0%
AGTTCAAATTCACCATCTGG+AGG - chr5_1:5701666-5701685 None:intergenic 40.0%
AAATAGGACAAGTGGGTAGA+AGG + chr5_1:5701772-5701791 Msa0713510:intron 40.0%
AATAGGACAAGTGGGTAGAA+GGG + chr5_1:5701773-5701792 Msa0713510:intron 40.0%
ATCACCGTCACACTTTGATA+GGG + chr5_1:5701918-5701937 Msa0713510:intron 40.0%
GTTTCCCTATCAAAGTGTGA+CGG - chr5_1:5701925-5701944 None:intergenic 40.0%
ACAGAGAACTGGGTGAAAAT+GGG - chr5_1:5702080-5702099 None:intergenic 40.0%
AACAGAGAACTGGGTGAAAA+TGG - chr5_1:5702081-5702100 None:intergenic 40.0%
ATTATAATATGCAGGGGTCG+GGG - chr5_1:5702182-5702201 None:intergenic 40.0%
CATTATAATATGCAGGGGTC+GGG - chr5_1:5702183-5702202 None:intergenic 40.0%
GCATTATAATATGCAGGGGT+CGG - chr5_1:5702184-5702203 None:intergenic 40.0%
CCCAGTTCTCTATATTACCA+AGG + chr5_1:5702242-5702261 Msa0713510:intron 40.0%
TTACCAAGGATAGAGTCACA+AGG + chr5_1:5702256-5702275 Msa0713510:intron 40.0%
AGTCACAAGGTTCACTTCAT+TGG + chr5_1:5702269-5702288 Msa0713510:intron 40.0%
!! CGCTGCTTTGGAAAGATAAA+AGG - chr5_1:5702398-5702417 None:intergenic 40.0%
GTGACATAACTCCCGTTATT+AGG + chr5_1:5702476-5702495 Msa0713510:intron 40.0%
ACCTCTACCATCCATTCAAA+GGG - chr5_1:5702582-5702601 None:intergenic 40.0%
AACCTCTACCATCCATTCAA+AGG - chr5_1:5702583-5702602 None:intergenic 40.0%
ATGGATGGTAGAGGTTTCAA+TGG + chr5_1:5702587-5702606 Msa0713510:intron 40.0%
GATCCTCTCATGTGATATGA+GGG - chr5_1:5702614-5702633 None:intergenic 40.0%
GTGTAACTAGCTAAAGGGAA+TGG - chr5_1:5702636-5702655 None:intergenic 40.0%
!! CAGAGAACTTTGGGTTTTAC+TGG - chr5_1:5702703-5702722 None:intergenic 40.0%
TGCCAAGAGCAAACAAACTT+TGG - chr5_1:5702741-5702760 None:intergenic 40.0%
! CTGGAAATTTAGGGGTTTTC+TGG + chr5_1:5702867-5702886 Msa0713510:intron 40.0%
CCTTCAAGCTATTATCAGCT+TGG - chr5_1:5702999-5703018 None:intergenic 40.0%
CCAAGCTGATAATAGCTTGA+AGG + chr5_1:5702996-5703015 Msa0713510:CDS 40.0%
CCTTTCTGAATTGGTCCTTT+GGG - chr5_1:5703048-5703067 None:intergenic 40.0%
TCCTTTCTGAATTGGTCCTT+TGG - chr5_1:5703049-5703068 None:intergenic 40.0%
GGGTCAAACTTAAACGATTG+CGG + chr5_1:5703105-5703124 Msa0713510:intron 40.0%
GGTCAAACTTAAACGATTGC+GGG + chr5_1:5703106-5703125 Msa0713510:intron 40.0%
AAGAATTCCAGGACAGTATC+AGG - chr5_1:5703156-5703175 None:intergenic 40.0%
TCATGCTGTTCACAATTTCC+TGG + chr5_1:5703184-5703203 Msa0713510:intron 40.0%
!! TATTTCCCACTTGGTGATGT+CGG - chr5_1:5703360-5703379 None:intergenic 40.0%
! TATCAGGTATCGTATCACTG+AGG + chr5_1:5703636-5703655 Msa0713510:intron 40.0%
! ATCAGGTATCGTATCACTGA+GGG + chr5_1:5703637-5703656 Msa0713510:intron 40.0%
GATGGTTGGCAATACTTTGA+AGG - chr5_1:5703674-5703693 None:intergenic 40.0%
!! CAAAGTATTGCCAACCATCA+AGG + chr5_1:5703675-5703694 Msa0713510:CDS 40.0%
GTGCAAAGATGTTTGCACTA+GGG + chr5_1:5703842-5703861 Msa0713510:CDS 40.0%
TGCAAAGATGTTTGCACTAG+GGG + chr5_1:5703843-5703862 Msa0713510:CDS 40.0%
TCAATTTCTGCGCTCAAAGT+TGG - chr5_1:5704248-5704267 None:intergenic 40.0%
ACCTGAAACTCCATCTGAAT+CGG - chr5_1:5704314-5704333 None:intergenic 40.0%
TTCTTAGCTTAGCTAGTGTC+AGG + chr5_1:5704439-5704458 Msa0713510:intron 40.0%
!! GCCCAAAAGGCATTTGAAAA+AGG - chr5_1:5704613-5704632 None:intergenic 40.0%
AAAAAATTTGCCTACGGTGG+AGG - chr5_1:5704658-5704677 None:intergenic 40.0%
ATATGTCACATTCACCTGCA+TGG + chr5_1:5704684-5704703 Msa0713510:intron 40.0%
CATGAAGAGAAAGACGAGTT+TGG - chr5_1:5704719-5704738 None:intergenic 40.0%
TGGGTACAACACTGTTGAAT+GGG + chr5_1:5704927-5704946 Msa0713510:CDS 40.0%
AAGCAGGATCATACGAGATT+AGG + chr5_1:5704965-5704984 Msa0713510:CDS 40.0%
AGATTAGGTGCTAGACACAT+TGG + chr5_1:5704980-5704999 Msa0713510:exon 40.0%
GATTAGGTGCTAGACACATT+GGG + chr5_1:5704981-5705000 Msa0713510:exon 40.0%
! GTTGCTGTTGTCAAACTTCA+GGG + chr5_1:5705003-5705022 Msa0713510:three_prime_UTR 40.0%
ATGGTATGAGATTGCTTCGA+TGG + chr5_1:5705352-5705371 Msa0713510:three_prime_UTR 40.0%
! AGGGAGGTGTATTGTCAAAC+TGG + chr5_1:5696506-5696525 Msa0713510:five_prime_UTR 45.0%
GTCAATCCGACGACTCATAA+CGG + chr5_1:5696535-5696554 Msa0713510:five_prime_UTR 45.0%
AGAAGATCAATCGGAAACGG+TGG - chr5_1:5696665-5696684 None:intergenic 45.0%
TTCGCCGGAAGAAGATCAAT+CGG - chr5_1:5696674-5696693 None:intergenic 45.0%
GTTTACTTCTTGAACCTCCG+TGG + chr5_1:5696758-5696777 Msa0713510:CDS 45.0%
GATTGATGAGAACGTCACCA+CGG - chr5_1:5696778-5696797 None:intergenic 45.0%
GAAGATCTCTACTGGGAAAG+AGG - chr5_1:5696849-5696868 None:intergenic 45.0%
ATGTTTACCGGAGTGATTCC+CGG + chr5_1:5697156-5697175 Msa0713510:intron 45.0%
AACATTACCGGGAATCACTC+CGG - chr5_1:5697166-5697185 None:intergenic 45.0%
! CCTAACATTGAGGTACCTAC+CGG + chr5_1:5697331-5697350 Msa0713510:intron 45.0%
! CGGTTTTTGCGTCTCTTTTG+TGG + chr5_1:5697495-5697514 Msa0713510:intron 45.0%
GGGTCAGGGTTATAAAGTGA+AGG + chr5_1:5697654-5697673 Msa0713510:intron 45.0%
AAAAAGCTTCGAGGTGGTAG+TGG + chr5_1:5697703-5697722 Msa0713510:intron 45.0%
!! TAATGCCTTTTCGGGAACAC+TGG + chr5_1:5697831-5697850 Msa0713510:intron 45.0%
CAAATCCAGTGTTCCCGAAA+AGG - chr5_1:5697875-5697894 None:intergenic 45.0%
AGCGCAAGCTACATTAGCAT+TGG - chr5_1:5698113-5698132 None:intergenic 45.0%
!! CGCTTTCAAGTTCGTTGTAG+AGG + chr5_1:5698129-5698148 Msa0713510:CDS 45.0%
! TGTCTTTGTTGCTTGTGCGT+AGG + chr5_1:5698270-5698289 Msa0713510:intron 45.0%
!! CATTAGCTTTCAGTGGTAGC+AGG - chr5_1:5698547-5698566 None:intergenic 45.0%
!! AAGTGATGGACCCTTGATTC+TGG + chr5_1:5698682-5698701 Msa0713510:intron 45.0%
GAATGCACCTTCCAGAATCA+AGG - chr5_1:5698696-5698715 None:intergenic 45.0%
ATAAGGGAAAAAGGGACGAG+TGG + chr5_1:5698735-5698754 Msa0713510:intron 45.0%
GACGAGTGGAGGAAAAATAC+TGG + chr5_1:5698749-5698768 Msa0713510:intron 45.0%
TGGAGGAAAAATACTGGGAG+AGG + chr5_1:5698755-5698774 Msa0713510:intron 45.0%
GAAAAATACTGGGAGAGGTG+CGG + chr5_1:5698760-5698779 Msa0713510:intron 45.0%
TTATGCAAGGGCGAATTGAG+TGG + chr5_1:5698783-5698802 Msa0713510:intron 45.0%
TATGCAAGGGCGAATTGAGT+GGG + chr5_1:5698784-5698803 Msa0713510:intron 45.0%
! CTGTCTGGCATTTTACACTC+TGG - chr5_1:5698812-5698831 None:intergenic 45.0%
!!! GGGTATTTTGGAATCATGGG+AGG + chr5_1:5698848-5698867 Msa0713510:intron 45.0%
!! CCTTACAAGCGGGTTTTGTA+AGG - chr5_1:5699656-5699675 None:intergenic 45.0%
CCTTACAAAACCCGCTTGTA+AGG + chr5_1:5699653-5699672 Msa0713510:intron 45.0%
AAAACCCGCTTGTAAGGTGA+GGG + chr5_1:5699659-5699678 Msa0713510:intron 45.0%
TCATTGTGTTGGGTGTGAAG+GGG - chr5_1:5699746-5699765 None:intergenic 45.0%
CTTCATTGTGTTGGGTGTGA+AGG - chr5_1:5699748-5699767 None:intergenic 45.0%
CTTCACACCCAACACAATGA+AGG + chr5_1:5699746-5699765 Msa0713510:intron 45.0%
! ACCCAACACAATGAAGGTGT+TGG + chr5_1:5699752-5699771 Msa0713510:intron 45.0%
CTCCAACACCTTCATTGTGT+TGG - chr5_1:5699757-5699776 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG + chr5_1:5699755-5699774 Msa0713510:intron 45.0%
GCAGCATAATTGCGGCATTT+GGG - chr5_1:5699796-5699815 None:intergenic 45.0%
AGCAGCATAATTGCGGCATT+TGG - chr5_1:5699797-5699816 None:intergenic 45.0%
AATGCCGCAATTATGCTGCT+AGG + chr5_1:5699797-5699816 Msa0713510:intron 45.0%
ATGCCGCAATTATGCTGCTA+GGG + chr5_1:5699798-5699817 Msa0713510:intron 45.0%
GCAAATTTCGGCCTTCATTG+CGG - chr5_1:5699829-5699848 None:intergenic 45.0%
CCTTATGTAGCCCATATTGG+AGG - chr5_1:5699923-5699942 None:intergenic 45.0%
! CCTCCAATATGGGCTACATA+AGG + chr5_1:5699920-5699939 Msa0713510:intron 45.0%
GGGCTACATAAGGACTAGAA+TGG + chr5_1:5699930-5699949 Msa0713510:intron 45.0%
AATAACCCAGGGAACTGCAA+TGG + chr5_1:5700148-5700167 Msa0713510:intron 45.0%
TACTACCATTGCAGTTCCCT+GGG - chr5_1:5700156-5700175 None:intergenic 45.0%
CCTTGGATGAAAAAGGGGAA+CGG - chr5_1:5700513-5700532 None:intergenic 45.0%
!! TCCCCTTTTTCATCCAAGGT+TGG + chr5_1:5700514-5700533 Msa0713510:intron 45.0%
! GTAACTTGCAACGTCGCATT+TGG - chr5_1:5700921-5700940 None:intergenic 45.0%
AATGCGACGTTGCAAGTTAC+GGG + chr5_1:5700921-5700940 Msa0713510:CDS 45.0%
TGTTCTGCGCTGTGATGTAA+CGG + chr5_1:5701195-5701214 Msa0713510:CDS 45.0%
!!! GTTAGTTTTGTGCCTCCAGA+TGG + chr5_1:5701651-5701670 Msa0713510:CDS 45.0%
CATCACCGTCACACTTTGAT+AGG + chr5_1:5701917-5701936 Msa0713510:intron 45.0%
CAGAGAACTGGGTGAAAATG+GGG - chr5_1:5702079-5702098 None:intergenic 45.0%
! TGAGCATAGCTCAGTTGGTA+GGG - chr5_1:5702212-5702231 None:intergenic 45.0%
TACCAACTGAGCTATGCTCA+CGG + chr5_1:5702212-5702231 Msa0713510:intron 45.0%
GAACCTTGTGACTCTATCCT+TGG - chr5_1:5702262-5702281 None:intergenic 45.0%
AACTCCCGTTATTAGGGAAG+CGG + chr5_1:5702483-5702502 Msa0713510:intron 45.0%
AGGATCCGCTTCCCTAATAA+CGG - chr5_1:5702491-5702510 None:intergenic 45.0%
ATTCAAAGGGAGGGAGAAAG+AGG - chr5_1:5702569-5702588 None:intergenic 45.0%
TCTTTCTCCCTCCCTTTGAA+TGG + chr5_1:5702568-5702587 Msa0713510:intron 45.0%
CTACCATCCATTCAAAGGGA+GGG - chr5_1:5702578-5702597 None:intergenic 45.0%
TCTACCATCCATTCAAAGGG+AGG - chr5_1:5702579-5702598 None:intergenic 45.0%
TCCCTTTGAATGGATGGTAG+AGG + chr5_1:5702578-5702597 Msa0713510:intron 45.0%
GGATCCTCTCATGTGATATG+AGG - chr5_1:5702615-5702634 None:intergenic 45.0%
CCCAAAGGACCAATTCAGAA+AGG + chr5_1:5703045-5703064 Msa0713510:intron 45.0%
AAACGATTGCGGGCGTAATT+TGG + chr5_1:5703116-5703135 Msa0713510:intron 45.0%
GCTATTACCTGATACTGTCC+TGG + chr5_1:5703146-5703165 Msa0713510:intron 45.0%
!! ATTTCCCACTTGGTGATGTC+GGG - chr5_1:5703359-5703378 None:intergenic 45.0%
GGAGGTGACTATCACTTCAA+TGG - chr5_1:5703461-5703480 None:intergenic 45.0%
TTATACCAACGCTCTCAAGG+AGG - chr5_1:5703479-5703498 None:intergenic 45.0%
TTGCCAACCATCAAGGAACT+TGG + chr5_1:5703682-5703701 Msa0713510:CDS 45.0%
TGTTCGACCAAGTTCCTTGA+TGG - chr5_1:5703692-5703711 None:intergenic 45.0%
TCAAGGAACTTGGTCGAACA+CGG + chr5_1:5703692-5703711 Msa0713510:CDS 45.0%
GGTGCAAAGATGTTTGCACT+AGG + chr5_1:5703841-5703860 Msa0713510:CDS 45.0%
!! TTTGCTGTTTGTTTCGGCAC+AGG - chr5_1:5703883-5703902 None:intergenic 45.0%
ACGAGTTTCACAGTCACATC+CGG + chr5_1:5703904-5703923 Msa0713510:CDS 45.0%
TGAAACTCCATCTGAATCGG+TGG - chr5_1:5704311-5704330 None:intergenic 45.0%
! ACCGATTCAGATGGAGTTTC+AGG + chr5_1:5704310-5704329 Msa0713510:CDS 45.0%
!! TTAGTTTGCACTGGCAGACA+CGG + chr5_1:5704541-5704560 Msa0713510:intron 45.0%
CACAACAACAGTTGCCCAAA+AGG - chr5_1:5704626-5704645 None:intergenic 45.0%
! CTTTTGGGCAACTGTTGTTG+TGG + chr5_1:5704624-5704643 Msa0713510:intron 45.0%
AGACCAGATGCTGTGAACAT+GGG - chr5_1:5704785-5704804 None:intergenic 45.0%
TAGACCAGATGCTGTGAACA+TGG - chr5_1:5704786-5704805 None:intergenic 45.0%
! TGAAGGTGTGGGAAAAGAGT+GGG + chr5_1:5704908-5704927 Msa0713510:intron 45.0%
GTGGGTACAACACTGTTGAA+TGG + chr5_1:5704926-5704945 Msa0713510:CDS 45.0%
GTTCGCTACATCACAAAAGC+AGG + chr5_1:5704949-5704968 Msa0713510:CDS 45.0%
! GGTTGCTGTTGTCAAACTTC+AGG + chr5_1:5705002-5705021 Msa0713510:three_prime_UTR 45.0%
!! AAAAAAAAAAAAAACTTAAA+GGG + chr5_1:5703068-5703087 Msa0713510:intron 5.0%
!!! TAAAATAATTTTATAATATC+AGG + chr5_1:5703620-5703639 Msa0713510:intron 5.0%
CATAAGACGCACGTGCCAAA+GGG + chr5_1:5696487-5696506 Msa0713510:five_prime_UTR 50.0%
CAGACTCCGTTATGAGTCGT+CGG - chr5_1:5696544-5696563 None:intergenic 50.0%
TTCGCTCCTCCACAGATCTA+CGG + chr5_1:5696634-5696653 Msa0713510:five_prime_UTR 50.0%
AACCTCTCCGTCGGTGAAAT+TGG + chr5_1:5696692-5696711 Msa0713510:five_prime_UTR 50.0%
TTCCAATTTCACCGACGGAG+AGG - chr5_1:5696697-5696716 None:intergenic 50.0%
ATACACTGGATCGGAGATGC+CGG + chr5_1:5696721-5696740 Msa0713510:exon 50.0%
TCTACTGGGAAAGAGGGAGA+GGG - chr5_1:5696842-5696861 None:intergenic 50.0%
AATTCCAGGGTTTCCCGAAG+AGG - chr5_1:5697113-5697132 None:intergenic 50.0%
GGGAAACCCTGGAATTTGTC+TGG + chr5_1:5697117-5697136 Msa0713510:intron 50.0%
CCGGTAGGTACCTCAATGTT+AGG - chr5_1:5697334-5697353 None:intergenic 50.0%
ACAACCGCGATTCAGAGAGT+AGG + chr5_1:5697571-5697590 Msa0713510:intron 50.0%
CAACCGCGATTCAGAGAGTA+GGG + chr5_1:5697572-5697591 Msa0713510:intron 50.0%
GAACCCTACTCTCTGAATCG+CGG - chr5_1:5697578-5697597 None:intergenic 50.0%
GTTGCGGTGAAAAAGCTTCG+AGG + chr5_1:5697694-5697713 Msa0713510:intron 50.0%
ACCTGTCCTGTGAAGCAGAT+TGG + chr5_1:5698028-5698047 Msa0713510:CDS 50.0%
ACCAATCTGCTTCACAGGAC+AGG - chr5_1:5698032-5698051 None:intergenic 50.0%
TGTCCTGTGAAGCAGATTGG+TGG + chr5_1:5698031-5698050 Msa0713510:CDS 50.0%
CATCCACCAATCTGCTTCAC+AGG - chr5_1:5698037-5698056 None:intergenic 50.0%
!!! TTTTGGTGGCGCTTTTGACG+AGG + chr5_1:5698410-5698429 Msa0713510:CDS 50.0%
GATGGACCCTTGATTCTGGA+AGG + chr5_1:5698686-5698705 Msa0713510:intron 50.0%
ATGCAAGGGCGAATTGAGTG+GGG + chr5_1:5698785-5698804 Msa0713510:intron 50.0%
CAAAACCCGCTTGTAAGGTG+AGG + chr5_1:5699658-5699677 Msa0713510:intron 50.0%
TGCCGCAATTATGCTGCTAG+GGG + chr5_1:5699799-5699818 Msa0713510:intron 50.0%
CACCCCTAGCAGCATAATTG+CGG - chr5_1:5699804-5699823 None:intergenic 50.0%
GCAATTATGCTGCTAGGGGT+GGG + chr5_1:5699803-5699822 Msa0713510:intron 50.0%
CTACTACCATTGCAGTTCCC+TGG - chr5_1:5700157-5700176 None:intergenic 50.0%
!! CCGTTCCCCTTTTTCATCCA+AGG + chr5_1:5700510-5700529 Msa0713510:CDS 50.0%
AAGCACGTGCAAACCAACCT+TGG - chr5_1:5700530-5700549 None:intergenic 50.0%
GTGCAATGGTTGGGAGAAAC+AGG + chr5_1:5700878-5700897 Msa0713510:intron 50.0%
! TGCAACGTCGCATTTGGAAC+AGG - chr5_1:5700915-5700934 None:intergenic 50.0%
! TTGCAAGTTACGGGTGCTGT+TGG + chr5_1:5700930-5700949 Msa0713510:CDS 50.0%
!! AAGTTACGGGTGCTGTTGGT+TGG + chr5_1:5700934-5700953 Msa0713510:CDS 50.0%
GTTCTGCGCTGTGATGTAAC+GGG + chr5_1:5701196-5701215 Msa0713510:CDS 50.0%
TTCTGCGCTGTGATGTAACG+GGG + chr5_1:5701197-5701216 Msa0713510:CDS 50.0%
! AGGTGAATACATGGGGTGTC+CGG + chr5_1:5702148-5702167 Msa0713510:intron 50.0%
GTGAGCATAGCTCAGTTGGT+AGG - chr5_1:5702213-5702232 None:intergenic 50.0%
ACCAACTGAGCTATGCTCAC+GGG + chr5_1:5702213-5702232 Msa0713510:intron 50.0%
! GCGTGTCATCGACTGCAAAT+TGG + chr5_1:5702415-5702434 Msa0713510:intron 50.0%
GGATCCGCTTCCCTAATAAC+GGG - chr5_1:5702490-5702509 None:intergenic 50.0%
GGGAGGGAGAAAGAGGATTA+AGG - chr5_1:5702562-5702581 None:intergenic 50.0%
TCTCCCTCCCTTTGAATGGA+TGG + chr5_1:5702572-5702591 Msa0713510:intron 50.0%
GGACCCTCATATCACATGAG+AGG + chr5_1:5702608-5702627 Msa0713510:intron 50.0%
TCTGGGTTTATCCGGCCAAA+TGG + chr5_1:5702936-5702955 Msa0713510:CDS 50.0%
AAAACTTAAAGGGCCGACCC+AGG + chr5_1:5703078-5703097 Msa0713510:intron 50.0%
GTTTGACCCATTTCCTGGGT+CGG - chr5_1:5703094-5703113 None:intergenic 50.0%
!! ACTTGGTGATGTCGGGTACA+TGG - chr5_1:5703352-5703371 None:intergenic 50.0%
ATGTACCCGACATCACCAAG+TGG + chr5_1:5703351-5703370 Msa0713510:intron 50.0%
TGTACCCGACATCACCAAGT+GGG + chr5_1:5703352-5703371 Msa0713510:intron 50.0%
! CGACCAAGTTCCTTGATGGT+TGG - chr5_1:5703688-5703707 None:intergenic 50.0%
! AAAGTTGGCTCAGTTTGCCC+AGG - chr5_1:5704233-5704252 None:intergenic 50.0%
!! GACTAGACCACCGATTCAGA+TGG + chr5_1:5704301-5704320 Msa0713510:CDS 50.0%
GGTTATTGTTCCTCCACCGT+AGG + chr5_1:5704645-5704664 Msa0713510:intron 50.0%
TTTGGAGAGATGTGCCATGC+AGG - chr5_1:5704701-5704720 None:intergenic 50.0%
GTTCCCATGTTCACAGCATC+TGG + chr5_1:5704779-5704798 Msa0713510:CDS 50.0%
! CTGAAGGTGTGGGAAAAGAG+TGG + chr5_1:5704907-5704926 Msa0713510:intron 50.0%
GCATAAGACGCACGTGCCAA+AGG + chr5_1:5696486-5696505 Msa0713510:five_prime_UTR 55.0%
GAACGAAACGACGTCGTCGA+CGG - chr5_1:5696614-5696633 None:intergenic 55.0%
GTTTCGCCGTAGATCTGTGG+AGG - chr5_1:5696643-5696662 None:intergenic 55.0%
GTGGTTTCGCCGTAGATCTG+TGG - chr5_1:5696646-5696665 None:intergenic 55.0%
TAAACAGCGGAAGCAGCCAC+CGG - chr5_1:5696743-5696762 None:intergenic 55.0%
TGATGAGAACGTCACCACGG+AGG - chr5_1:5696775-5696794 None:intergenic 55.0%
CGTCTCTATCGCGACGATGT+CGG + chr5_1:5696797-5696816 Msa0713510:CDS 55.0%
GTCTCTATCGCGACGATGTC+GGG + chr5_1:5696798-5696817 Msa0713510:CDS 55.0%
CTACTGGGAAAGAGGGAGAG+GGG - chr5_1:5696841-5696860 None:intergenic 55.0%
CTCTACTGGGAAAGAGGGAG+AGG - chr5_1:5696843-5696862 None:intergenic 55.0%
ATTGCCTCTTCGGGAAACCC+TGG + chr5_1:5697106-5697125 Msa0713510:intron 55.0%
! GTCGGGTCTAATGGGTAACC+CGG + chr5_1:5697375-5697394 Msa0713510:intron 55.0%
! TCGGGTCTAATGGGTAACCC+GGG + chr5_1:5697376-5697395 Msa0713510:intron 55.0%
GCGGTGAAAAAGCTTCGAGG+TGG + chr5_1:5697697-5697716 Msa0713510:intron 55.0%
AGGGAAAAAGGGACGAGTGG+AGG + chr5_1:5698738-5698757 Msa0713510:intron 55.0%
! GGAGAGGTGCGGTTATGCAA+GGG + chr5_1:5698771-5698790 Msa0713510:intron 55.0%
TGCAAGGGCGAATTGAGTGG+GGG + chr5_1:5698786-5698805 Msa0713510:intron 55.0%
TGTGTTGGGTGTGAAGGGGT+CGG - chr5_1:5699742-5699761 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG + chr5_1:5699767-5699786 Msa0713510:intron 55.0%
CGCAATTATGCTGCTAGGGG+TGG + chr5_1:5699802-5699821 Msa0713510:intron 55.0%
GACATGGTCGCAGATGCGAT+AGG + chr5_1:5700571-5700590 Msa0713510:intron 55.0%
!! TTACGGGTGCTGTTGGTTGG+CGG + chr5_1:5700937-5700956 Msa0713510:CDS 55.0%
GTCAACAGAAGCTCGGAGAG+TGG - chr5_1:5701855-5701874 None:intergenic 55.0%
! TGGTCAAGTAGGCTGGCTAG+TGG + chr5_1:5702108-5702127 Msa0713510:intron 55.0%
! GGTGAATACATGGGGTGTCC+GGG + chr5_1:5702149-5702168 Msa0713510:intron 55.0%
! GTGAATACATGGGGTGTCCG+GGG + chr5_1:5702150-5702169 Msa0713510:intron 55.0%
CCAACTGAGCTATGCTCACG+GGG + chr5_1:5702214-5702233 Msa0713510:intron 55.0%
CAGTCGATGACACGCTGCTT+TGG - chr5_1:5702410-5702429 None:intergenic 55.0%
TAAAGGGCCGACCCAGGAAA+TGG + chr5_1:5703084-5703103 Msa0713510:intron 55.0%
AAAGGGCCGACCCAGGAAAT+GGG + chr5_1:5703085-5703104 Msa0713510:intron 55.0%
! AGTCACCTCCTTGAGAGCGT+TGG + chr5_1:5703471-5703490 Msa0713510:intron 55.0%
GGAACTTGGTCGAACACGGA+TGG + chr5_1:5703696-5703715 Msa0713510:CDS 55.0%
AAGACGCACGTGCCAAAGGG+AGG + chr5_1:5696490-5696509 Msa0713510:five_prime_UTR 60.0%
ATTAGGAGGGGGTTCGGGTC+AGG + chr5_1:5697639-5697658 Msa0713510:intron 60.0%
TTAGGAGGGGGTTCGGGTCA+GGG + chr5_1:5697640-5697659 Msa0713510:intron 60.0%
! GGGAGAGGTGCGGTTATGCA+AGG + chr5_1:5698770-5698789 Msa0713510:intron 60.0%
GCAGCCCTCACCTTACAAGC+GGG - chr5_1:5699666-5699685 None:intergenic 60.0%
GGCAGCCCTCACCTTACAAG+CGG - chr5_1:5699667-5699686 None:intergenic 60.0%
! GCTGTTGGTTGGCGGAGAGA+AGG + chr5_1:5700945-5700964 Msa0713510:CDS 60.0%
CCCCGTGAGCATAGCTCAGT+TGG - chr5_1:5702217-5702236 None:intergenic 60.0%
GAAACATGGGGGGGGTTGAG+AGG - chr5_1:5702511-5702530 None:intergenic 60.0%
CTTCCGGCGAACCTCTCCGT+CGG + chr5_1:5696683-5696702 Msa0713510:five_prime_UTR 65.0%
TCACCGACGGAGAGGTTCGC+CGG - chr5_1:5696689-5696708 None:intergenic 65.0%
CACTGGATCGGAGATGCCGG+TGG + chr5_1:5696724-5696743 Msa0713510:exon 65.0%
GGAAAGAGGGAGAGGGGAGG+AGG - chr5_1:5696835-5696854 None:intergenic 65.0%
CTGGGAAAGAGGGAGAGGGG+AGG - chr5_1:5696838-5696857 None:intergenic 65.0%
CTAGGGGTGGGCCGCAATGA+AGG + chr5_1:5699815-5699834 Msa0713510:intron 65.0%
AGGGGTCGGGGTTCGAACCC+CGG - chr5_1:5702170-5702189 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 5696478 5705425 5696478 ID=Msa0713510;Name=Msa0713510
chr5_1 mRNA 5696478 5705425 5696478 ID=Msa0713510-mRNA-1;Parent=Msa0713510;Name=Msa0713510-mRNA-1;_AED=0.14;_eAED=0.14;_QI=259|0.85|0.93|0.93|0.78|0.86|15|358|491
chr5_1 exon 5696478 5696819 5696478 ID=Msa0713510-mRNA-1:exon:2509;Parent=Msa0713510-mRNA-1
chr5_1 exon 5697973 5698150 5697973 ID=Msa0713510-mRNA-1:exon:2510;Parent=Msa0713510-mRNA-1
chr5_1 exon 5698387 5698477 5698387 ID=Msa0713510-mRNA-1:exon:2511;Parent=Msa0713510-mRNA-1
chr5_1 exon 5700437 5700531 5700437 ID=Msa0713510-mRNA-1:exon:2512;Parent=Msa0713510-mRNA-1
chr5_1 exon 5700900 5700989 5700900 ID=Msa0713510-mRNA-1:exon:2513;Parent=Msa0713510-mRNA-1
chr5_1 exon 5701068 5701116 5701068 ID=Msa0713510-mRNA-1:exon:2514;Parent=Msa0713510-mRNA-1
chr5_1 exon 5701191 5701329 5701191 ID=Msa0713510-mRNA-1:exon:2515;Parent=Msa0713510-mRNA-1
chr5_1 exon 5701575 5701691 5701575 ID=Msa0713510-mRNA-1:exon:2516;Parent=Msa0713510-mRNA-1
chr5_1 exon 5702879 5703037 5702879 ID=Msa0713510-mRNA-1:exon:2517;Parent=Msa0713510-mRNA-1
chr5_1 exon 5703642 5703732 5703642 ID=Msa0713510-mRNA-1:exon:2518;Parent=Msa0713510-mRNA-1
chr5_1 exon 5703826 5703968 5703826 ID=Msa0713510-mRNA-1:exon:2519;Parent=Msa0713510-mRNA-1
chr5_1 exon 5704217 5704331 5704217 ID=Msa0713510-mRNA-1:exon:2520;Parent=Msa0713510-mRNA-1
chr5_1 exon 5704779 5704823 5704779 ID=Msa0713510-mRNA-1:exon:2521;Parent=Msa0713510-mRNA-1
chr5_1 exon 5704913 5705277 5704913 ID=Msa0713510-mRNA-1:exon:2522;Parent=Msa0713510-mRNA-1
chr5_1 exon 5705352 5705425 5705352 ID=Msa0713510-mRNA-1:exon:2523;Parent=Msa0713510-mRNA-1
chr5_1 five_prime_UTR 5696478 5696736 5696478 ID=Msa0713510-mRNA-1:five_prime_utr;Parent=Msa0713510-mRNA-1
chr5_1 CDS 5696737 5696819 5696737 ID=Msa0713510-mRNA-1:cds;Parent=Msa0713510-mRNA-1
chr5_1 CDS 5697973 5698150 5697973 ID=Msa0713510-mRNA-1:cds;Parent=Msa0713510-mRNA-1
chr5_1 CDS 5698387 5698477 5698387 ID=Msa0713510-mRNA-1:cds;Parent=Msa0713510-mRNA-1
chr5_1 CDS 5700437 5700531 5700437 ID=Msa0713510-mRNA-1:cds;Parent=Msa0713510-mRNA-1
chr5_1 CDS 5700900 5700989 5700900 ID=Msa0713510-mRNA-1:cds;Parent=Msa0713510-mRNA-1
chr5_1 CDS 5701068 5701116 5701068 ID=Msa0713510-mRNA-1:cds;Parent=Msa0713510-mRNA-1
chr5_1 CDS 5701191 5701329 5701191 ID=Msa0713510-mRNA-1:cds;Parent=Msa0713510-mRNA-1
chr5_1 CDS 5701575 5701691 5701575 ID=Msa0713510-mRNA-1:cds;Parent=Msa0713510-mRNA-1
chr5_1 CDS 5702879 5703037 5702879 ID=Msa0713510-mRNA-1:cds;Parent=Msa0713510-mRNA-1
chr5_1 CDS 5703642 5703732 5703642 ID=Msa0713510-mRNA-1:cds;Parent=Msa0713510-mRNA-1
chr5_1 CDS 5703826 5703968 5703826 ID=Msa0713510-mRNA-1:cds;Parent=Msa0713510-mRNA-1
chr5_1 CDS 5704217 5704331 5704217 ID=Msa0713510-mRNA-1:cds;Parent=Msa0713510-mRNA-1
chr5_1 CDS 5704779 5704823 5704779 ID=Msa0713510-mRNA-1:cds;Parent=Msa0713510-mRNA-1
chr5_1 CDS 5704913 5704993 5704913 ID=Msa0713510-mRNA-1:cds;Parent=Msa0713510-mRNA-1
chr5_1 three_prime_UTR 5704994 5705277 5704994 ID=Msa0713510-mRNA-1:three_prime_utr;Parent=Msa0713510-mRNA-1
chr5_1 three_prime_UTR 5705352 5705425 5705352 ID=Msa0713510-mRNA-1:three_prime_utr;Parent=Msa0713510-mRNA-1
Gene Sequence

>Msa0713510

ATGCCGGTGGCTGCTTCCGCTGTTTACTTCTTGAACCTCCGTGGTGACGTTCTCATCAATCGTCTCTATCGCGACGATGTCGGGGGAAATATGGTTGATGCTTTTCGGACGCATATAATGCAAACGAAAGAACTTGGTACCTGTCCTGTGAAGCAGATTGGTGGATGCTCTTTCTTTTACATGAGGATCAGCAATGTCTACATTGTGATTGTTGTCAGTACCAATGCTAATGTAGCTTGCGCTTTCAAGTTCGTTGTAGAGGCTGTTGCACTATTCAAATCATATTTTGGTGGCGCTTTTGACGAGGATGCAATTCGCAACAATTTTGTACTCATTTACGAGCTTCTAGATGAAATCATGGACTTTGGTTATCCACAAAATCTTTCACCGGAGATCTTAAAGCTTTATATTACTCAAGAAGGAGTCCGTTCCCCTTTTTCATCCAAGGCATCAGAGAGACCTGTTCCAAATGCGACGTTGCAAGTTACGGGTGCTGTTGGTTGGCGGAGAGAAGGCCTTGTATACAAAAAGAACGAGGTGTTCCTAGATATTGTGGAGAGTGTGAATCTTCTTATGTCGTCAAAAGGCGTTGTTCTGCGCTGTGATGTAACGGGGAAGATTCTTATGAAGTGCTTTCTATCTGGAATGCCTGATTTGAAGTTGGGTTTGAATGATAAGATTGGCCTTGAGAAAGAGTCACAACTTAAATCACGCCCTACTAAAAGTGGCAAAACTATTGAGCTTGATGACGTCACTTTCCATCAATGTGTAAATTTGACGAGGTTCAACTCGGAGAAGACTGTTAGTTTTGTGCCTCCAGATGGTGAATTTGAACTGATGAAGGGTTTTCTGGGTTTCAATGACATATTGGAGAAGGAAAAAGATAACTATGGATTTTTTCTGGGTTTATCCGGCCAAATGGCTTATTTTTTAATGAAAATCTTTGAATGGGCAACAGTCCAAGCTGATAATAGCTTGAAGGTTAACGATGCAGACACATTGTATCGTATCACTGAGGGTGTTAATCTTCCCTTCAAAGTATTGCCAACCATCAAGGAACTTGGTCGAACACGGATGGAAGTAAATGTTAAGGTAAAGAGTGTCTTTGGTGCAAAGATGTTTGCACTAGGGGTTGTTGTCAAAATTCCTGTGCCGAAACAAACAGCAAAAACGAGTTTCACAGTCACATCCGGTCGAGCAAAATATAATGCAGCTATTGATTGTTTAGTTTGGAAGATAAGAAAATTTCCTGGGCAAACTGAGCCAACTTTGAGCGCAGAAATTGAACTTATATCTACGATGACTGAAAAGAAATCATGGACTAGACCACCGATTCAGATGGAGTTTCAGGTTCCCATGTTCACAGCATCTGGTCTACGTGTTCGTTTTCTTAAGGTGTGGGAAAAGAGTGGGTACAACACTGTTGAATGGGTTCGCTACATCACAAAAGCAGGATCATACGAGATTAGGTGCTAG
Protein sequence

>Msa0713510

MPVAASAVYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVKQIGGCSFFYMRISNVYIVIVVSTNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKASERPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKGFLGFNDILEKEKDNYGFFLGLSGQMAYFLMKIFEWATVQADNSLKVNDADTLYRITEGVNLPFKVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTSFTVTSGRAKYNAAIDCLVWKIRKFPGQTEPTLSAEIELISTMTEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITKAGSYEIRC*