AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1063400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1063400 MtrunA17_Chr7g0242611 88.323 1139 32 3 1 1057 1 1120 0.0 1977
Msa1063400 MtrunA17_Chr5g0437271 42.574 1111 523 22 29 1057 29 1106 0.0 772
Msa1063400 MtrunA17_Chr8g0370421 25.348 1148 664 33 1 1053 1 1050 2.19e-81 287
Msa1063400 MtrunA17_Chr5g0407051 40.351 114 68 0 25 138 47 160 3.94e-24 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1063400 AT5G05570.2 43.406 1145 514 20 1 1057 1 1099 0.0 848
Msa1063400 AT5G05570.1 42.479 1170 514 21 1 1057 1 1124 0.0 835
Msa1063400 AT4G35560.1 25.482 1142 664 39 1 1053 1 1044 5.17e-67 245
Msa1063400 AT4G35560.2 25.459 1143 664 39 1 1053 1 1045 6.56e-67 245

Find 227 sgRNAs with CRISPR-Local

Find 596 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGATTGTTGATTGCATTTC+AGG 0.092632 7_2:+55294234 Msa1063400:intron
CTTTCTTGCACAGGCTCTTC+AGG 0.145395 7_2:-55297122 None:intergenic
GAGTTTCCTGAAGGTGTTTC+TGG 0.183985 7_2:-55296628 None:intergenic
TGTTCAAATTGGCCCTTAAC+TGG 0.191166 7_2:+55295345 Msa1063400:CDS
GTTCAGCTTCTTGTTCAAAT+TGG 0.205651 7_2:+55295334 Msa1063400:CDS
CTTTCACAACCTTATTCTTC+TGG 0.208068 7_2:+55292800 Msa1063400:CDS
GATAGAAACTGCCGGGTTTC+CGG 0.225430 7_2:+55292748 Msa1063400:intron
TTGTTCTGCTTCCTTGCTTC+TGG 0.232304 7_2:+55295796 Msa1063400:CDS
ATTTGTCAGCTAAATTTCTA+AGG 0.258315 7_2:+55292379 Msa1063400:CDS
GAAAAGACAATGCTACAAAA+AGG 0.264102 7_2:-55300294 None:intergenic
AGGATGGACTGCTAATTCTT+TGG 0.270386 7_2:+55294254 Msa1063400:CDS
AGACTGGAACATTTGAAATA+AGG 0.273849 7_2:+55297474 Msa1063400:CDS
CGTGCAGACCTTACACTTAA+TGG 0.282163 7_2:+55294921 Msa1063400:CDS
CTCCAAACCAATGAAGTAAT+TGG 0.283599 7_2:-55296562 None:intergenic
GTACAGATCTTTACCAGATT+TGG 0.286118 7_2:+55297755 Msa1063400:intron
TCTGGAACCAAACTTGCTAT+TGG 0.293339 7_2:+55296340 Msa1063400:CDS
CCATAGTGAATCACAATTCT+TGG 0.294823 7_2:-55290895 None:intergenic
ATGTTCCAAATGACCGAAAT+TGG 0.296250 7_2:-55298380 None:intergenic
AACCTCCAATTTCGGTCATT+TGG 0.297075 7_2:+55298375 Msa1063400:CDS
GGGAGGAAATCTTGATAATT+CGG 0.300267 7_2:-55300273 None:intergenic
TGCTTCCTTGCTTCTGGCTG+TGG 0.309147 7_2:+55295802 Msa1063400:CDS
CCCATTGTAAAGAACAAATA+AGG 0.321997 7_2:-55292112 None:intergenic
GGAGGAAATCTTGATAATTC+GGG 0.322167 7_2:-55300272 None:intergenic
CGCACGGCAGACCTGCAAAA+TGG 0.323423 7_2:+55300073 Msa1063400:CDS
CCATGACTTTCCCGCAATAA+AGG 0.323471 7_2:-55293174 None:intergenic
GTTGATAATTTCCAGGCTAA+TGG 0.324986 7_2:+55297943 Msa1063400:intron
CACCAATTACTTCATTGGTT+TGG 0.328055 7_2:+55296560 Msa1063400:CDS
AACATTCAAAATCTTGCTAT+TGG 0.328585 7_2:+55297399 Msa1063400:CDS
GAAGGTGTTTCTGGTTTCCT+TGG 0.329425 7_2:-55296619 None:intergenic
TCAAACAAGAAACAAGCTTA+TGG 0.330995 7_2:+55298965 Msa1063400:CDS
GGATGGACTGCTAATTCTTT+GGG 0.332819 7_2:+55294255 Msa1063400:CDS
CCAGGCTAATGGTTCTGAAT+TGG 0.336109 7_2:+55297954 Msa1063400:intron
TCTCATCTTCATCTTTCAAT+TGG 0.339397 7_2:-55294324 None:intergenic
TCGCCTCCTGCCTTTATTGC+GGG 0.343138 7_2:+55293164 Msa1063400:CDS
AAAATTCCAACCTCCAATTT+CGG 0.346963 7_2:+55298367 Msa1063400:CDS
TCCGCCACCAGTTCCAAATC+TGG 0.348858 7_2:-55297768 None:intergenic
CAGAACACCTGAAGAAATTA+TGG 0.350563 7_2:+55298811 Msa1063400:CDS
AGATACTATTTATCTTATCT+AGG 0.352165 7_2:+55296659 Msa1063400:CDS
AGCCACTTGTCCATGGTTAA+AGG 0.352397 7_2:+55295378 Msa1063400:CDS
AAGAAATAAGTGCTCTTTGT+TGG 0.355090 7_2:+55294407 Msa1063400:CDS
ACGACTGTGCCAGCGATTCT+AGG 0.356726 7_2:+55298292 Msa1063400:CDS
CAGATAAGTCACAAAGTGAT+AGG 0.361846 7_2:+55298741 Msa1063400:intron
GTGTATGGTGGTGATGAAAT+TGG 0.363278 7_2:+55294649 Msa1063400:CDS
GAATGCTCCAGTGACAAAAT+TGG 0.364061 7_2:+55295769 Msa1063400:CDS
CTCGCTGTTGGATACTTAGA+TGG 0.366231 7_2:+55294451 Msa1063400:CDS
AAGCTCACCAATTACTTCAT+TGG 0.367596 7_2:+55296555 Msa1063400:CDS
ACCATGTGTTCCGATGATTA+TGG 0.368780 7_2:+55297843 Msa1063400:CDS
TAGATGGAGATATCCTGTTT+TGG 0.368789 7_2:+55294467 Msa1063400:CDS
TTTGCAGGTCTGCCGTGCGC+TGG 0.369771 7_2:-55300069 None:intergenic
AAGGAAGTGGAGCTTGATAT+AGG 0.374339 7_2:+55298463 Msa1063400:CDS
TAGCTGGAGAAAATGAATTC+AGG 0.375722 7_2:+55297992 Msa1063400:CDS
GTTAAAGATGGATTATTCAT+AGG 0.380339 7_2:-55295128 None:intergenic
TCTTCAGGTGTTCTGACCCT+TGG 0.381611 7_2:-55298803 None:intergenic
CCACCATTTCCTCCTTTCCA+TGG 0.383097 7_2:-55300137 None:intergenic
CTTTGTTGGGCATCTTCTGA+TGG 0.384102 7_2:+55294421 Msa1063400:CDS
TGTGAAAGAATTCCAACAAT+TGG 0.386318 7_2:-55292785 None:intergenic
TAAGCAGCCATAATTTCTTC+AGG 0.386811 7_2:-55298818 None:intergenic
CGGGATTCTTCTTTCTGCAT+TGG 0.389526 7_2:-55294563 None:intergenic
AACCTTATTCTTCTGGGAAC+AGG 0.397060 7_2:+55292807 Msa1063400:CDS
TGCCTGTTCCCAGAAGAATA+AGG 0.397867 7_2:-55292809 None:intergenic
ATTATGAGATTTGTGACTAC+TGG 0.403349 7_2:-55294605 None:intergenic
TAGTTTACAATCAACTGAAT+TGG 0.404948 7_2:+55290870 Msa1063400:CDS
TATATTATGTTATATATTTG+TGG 0.405348 7_2:+55300227 Msa1063400:three_prime_UTR
ACTGGTCAGTTGTTTGTGTA+TGG 0.405579 7_2:+55294634 Msa1063400:CDS
CCTTATTTGTTCTTTACAAT+GGG 0.406302 7_2:+55292112 Msa1063400:CDS
CCAAGAATTGTGATTCACTA+TGG 0.406867 7_2:+55290895 Msa1063400:CDS
TTTCACAACCTTATTCTTCT+GGG 0.407166 7_2:+55292801 Msa1063400:CDS
TGAAACAAACGCCAATCTTC+CGG 0.407195 7_2:+55294354 Msa1063400:CDS
TTAACTCTTGAATGGTCATC+GGG 0.409662 7_2:+55294873 Msa1063400:CDS
TAAAATATCAGCCGGAAGAT+TGG 0.414385 7_2:-55294365 None:intergenic
TCTTCAGAAACCACACACTC+TGG 0.415190 7_2:+55297185 Msa1063400:CDS
AGAAATAAGTGCTCTTTGTT+GGG 0.416921 7_2:+55294408 Msa1063400:CDS
AAACCCCTTGCTCCTATACT+TGG 0.419341 7_2:-55294969 None:intergenic
TTTCTTGCACAGGCTCTTCA+GGG 0.420443 7_2:-55297121 None:intergenic
ACAACTTCCTTACAAATACT+TGG 0.420654 7_2:+55291629 Msa1063400:CDS
CAAAACCAGGGATATTTAGT+TGG 0.430818 7_2:+55291828 Msa1063400:CDS
GTTCAAATTGGCCCTTAACT+GGG 0.438451 7_2:+55295346 Msa1063400:CDS
GCCTTATTTGTTCTTTACAA+TGG 0.440656 7_2:+55292111 Msa1063400:CDS
CACTTATTTCTTTATCTCCC+AGG 0.443709 7_2:-55294396 None:intergenic
TCATAATAGTGTATTTGTCC+AGG 0.446171 7_2:-55295026 None:intergenic
GCAAAAGATAATGCTTGTAC+TGG 0.446732 7_2:-55296313 None:intergenic
TAAGTATCCAACAGCGAGAA+TGG 0.448584 7_2:-55294446 None:intergenic
CATTAATGTCTGAGCAGAAT+AGG 0.450554 7_2:+55295066 Msa1063400:CDS
ACCAGATTTGGAACTGGTGG+CGG 0.450594 7_2:+55297767 Msa1063400:CDS
TCCAACAATTGGTTGGTCGC+TGG 0.451139 7_2:-55292774 None:intergenic
ACACTCTGGGGATATCCATT+TGG 0.452074 7_2:+55297199 Msa1063400:CDS
GTTGAGCTGCTTTCTTGCAC+AGG 0.454580 7_2:-55297131 None:intergenic
GACCATTGTAAGACAATGAC+CGG 0.459143 7_2:-55294583 None:intergenic
GCTTCCTTGCTTCTGGCTGT+GGG 0.461533 7_2:+55295803 Msa1063400:CDS
GCATTCATCTCATTATTAGC+TGG 0.466277 7_2:+55297976 Msa1063400:CDS
TTTAACCATGGACAAGTGGC+TGG 0.467006 7_2:-55295376 None:intergenic
ATCTTTACCAGATTTGGAAC+TGG 0.469123 7_2:+55297761 Msa1063400:CDS
GTGGTTTGTTGGCCTTTAGA+AGG 0.470784 7_2:-55294508 None:intergenic
GGTAGTAGTGGCCGATGAAA+AGG 0.471467 7_2:+55298444 Msa1063400:CDS
GAAGCTAAAATTGTGTTCCT+TGG 0.471798 7_2:+55294286 Msa1063400:CDS
AGTGTAGTTGAGGGTGATAC+TGG 0.474842 7_2:+55296694 Msa1063400:CDS
CGAAAGTGCCATTAAGTGTA+AGG 0.475049 7_2:-55294929 None:intergenic
GATGGCTCCATTCTCGCTGT+TGG 0.475285 7_2:+55294439 Msa1063400:CDS
CTTAAATGATAATGATATCC+AGG 0.479937 7_2:+55291854 Msa1063400:CDS
TTCGATGAATTTAACTGACT+TGG 0.480073 7_2:-55295173 None:intergenic
TGGCAGGGATGGAAGACTTA+AGG 0.481066 7_2:+55291563 Msa1063400:intron
AGGAAACCAGAAACACCTTC+AGG 0.482972 7_2:+55296622 Msa1063400:CDS
CTTCAAAAGTTGTCCTTCCT+CGG 0.483030 7_2:-55292346 None:intergenic
TTCAAATTGGCCCTTAACTG+GGG 0.487106 7_2:+55295347 Msa1063400:CDS
CGTACCTCCAAGTATTTGTA+AGG 0.489987 7_2:-55291636 None:intergenic
GATCTTAAAGACTGCTCTGA+TGG 0.492473 7_2:+55295941 Msa1063400:CDS
CCTTTATTGCGGGAAAGTCA+TGG 0.492804 7_2:+55293174 Msa1063400:CDS
AAACAAGCTTATGGAGAGGC+AGG 0.493216 7_2:+55298974 Msa1063400:CDS
GATACTATTTATCTTATCTA+GGG 0.496579 7_2:+55296660 Msa1063400:CDS
CAAACTTTATCACAGAAAAC+AGG 0.497283 7_2:-55292320 None:intergenic
CTTCAGAAACCACACACTCT+GGG 0.497726 7_2:+55297186 Msa1063400:CDS
CAGACGACAAGTTCCAAAAC+AGG 0.497951 7_2:-55294480 None:intergenic
GATAGGGAGAAATTGTTTCA+AGG 0.499523 7_2:+55298758 Msa1063400:CDS
TGTTCCCAGCCACTTGTCCA+TGG 0.500792 7_2:+55295371 Msa1063400:CDS
TGATGAATTGATGATGATGT+TGG 0.501546 7_2:-55290693 None:intergenic
TTTGTCAGCTAAATTTCTAA+GGG 0.502655 7_2:+55292380 Msa1063400:CDS
GATGGAAGACTTAAGGTGAT+TGG 0.507610 7_2:+55291570 Msa1063400:CDS
ATTCTATCATTGCTTCAGAC+TGG 0.508271 7_2:+55297458 Msa1063400:CDS
ATTCTAGGCGGTATTGTCAA+AGG 0.509217 7_2:+55298307 Msa1063400:CDS
AGACCATGGAAAGGAGGAAA+TGG 0.509342 7_2:+55300134 Msa1063400:CDS
TCCAGCGACCAACCAATTGT+TGG 0.513314 7_2:+55292773 Msa1063400:CDS
AGACTCCAACTAAATATCCC+TGG 0.514072 7_2:-55291833 None:intergenic
GTCCACAAAAGCATTGATAC+AGG 0.515849 7_2:+55297265 Msa1063400:CDS
CTATTTATCTTATCTAGGGA+TGG 0.517108 7_2:+55296664 Msa1063400:CDS
CATGACGCTCCACAAGGAAA+AGG 0.517766 7_2:+55296253 Msa1063400:CDS
TGGAAGTGAATCTGACAAAG+AGG 0.518269 7_2:-55298416 None:intergenic
ATCGCCTCCTGCCTTTATTG+CGG 0.518686 7_2:+55293163 Msa1063400:CDS
GCTAAAATTGTGTTCCTTGG+TGG 0.519198 7_2:+55294289 Msa1063400:CDS
AAGCTTGTTTCTTGTTTGAG+AGG 0.522959 7_2:-55298961 None:intergenic
GCAGGACAAGTGGATCCAAA+TGG 0.523689 7_2:-55297214 None:intergenic
TCGTCTGCAGCACCTTCTAA+AGG 0.524578 7_2:+55294496 Msa1063400:CDS
AATTCCAGCACCTTTAACCA+TGG 0.525371 7_2:-55295388 None:intergenic
CATAATAGTGTATTTGTCCA+GGG 0.526367 7_2:-55295025 None:intergenic
TTCTAGGCGGTATTGTCAAA+GGG 0.527510 7_2:+55298308 Msa1063400:CDS
TTTAACTCTTGAATGGTCAT+CGG 0.527590 7_2:+55294872 Msa1063400:CDS
TCTTGAATGGTCATCGGGGA+TGG 0.528250 7_2:+55294878 Msa1063400:CDS
TAAGAAACCGATACGAAAAG+TGG 0.528713 7_2:+55297376 Msa1063400:CDS
GTCGCTGGACTCCGGAAACC+CGG 0.530556 7_2:-55292759 None:intergenic
GAAGTAGAAGCTGTAGTTTG+AGG 0.535734 7_2:-55298620 None:intergenic
AAAATTGTGTTCCTTGGTGG+TGG 0.536465 7_2:+55294292 Msa1063400:CDS
GCGAGAACTGAAGAAGAAGA+TGG 0.538241 7_2:-55290922 None:intergenic
CTTGCAGTTCCTACAAAACC+AGG 0.538891 7_2:+55291815 Msa1063400:intron
ATGGAATCATTAAAATGCAT+TGG 0.541425 7_2:+55294897 Msa1063400:CDS
ATTGGTTGGTCGCTGGACTC+CGG 0.542026 7_2:-55292767 None:intergenic
GACTTTCCCGCAATAAAGGC+AGG 0.542141 7_2:-55293170 None:intergenic
GTAATTGGTGAGCTTGAGCT+AGG 0.545627 7_2:-55296547 None:intergenic
ACTATAATATTCAGTTATGT+CGG 0.546627 7_2:+55292285 Msa1063400:intron
TACTGCCAAGTATAGGAGCA+AGG 0.547133 7_2:+55294964 Msa1063400:CDS
ATCTTAAAGACTGCTCTGAT+GGG 0.549270 7_2:+55295942 Msa1063400:CDS
GACATCCTCTGTATCTGCGC+AGG 0.549663 7_2:+55295088 Msa1063400:CDS
AAAGAATTCCAACAATTGGT+TGG 0.550006 7_2:-55292781 None:intergenic
TGAGGGTGATACTGGTAAAA+CGG 0.551223 7_2:+55296702 Msa1063400:CDS
CTGGCTGTGGGCAATGAATG+TGG 0.552459 7_2:+55295815 Msa1063400:CDS
ACTTCCTTACAAATACTTGG+AGG 0.553928 7_2:+55291632 Msa1063400:CDS
AGTGGCCGATGAAAAGGAAG+TGG 0.556924 7_2:+55298450 Msa1063400:CDS
TTTGAACAAGAAGCTGAACC+AGG 0.557074 7_2:-55295330 None:intergenic
AAATGACCGAAATTGGAGGT+TGG 0.557233 7_2:-55298373 None:intergenic
GTTTCTTGTTTGAGAGGCAA+CGG 0.558418 7_2:-55298955 None:intergenic
TTATTCATAGGTATTAGCAC+TGG 0.563489 7_2:-55295116 None:intergenic
TTCCAAATGACCGAAATTGG+AGG 0.563828 7_2:-55298377 None:intergenic
AAATCTCATAATGATTGCAC+TGG 0.566926 7_2:+55294616 Msa1063400:CDS
CACAATCTGTCCATAATCAT+CGG 0.567485 7_2:-55297853 None:intergenic
ACTGCCAAGTATAGGAGCAA+GGG 0.568001 7_2:+55294965 Msa1063400:CDS
ATAAAGTTTGATGCCGAGGA+AGG 0.569053 7_2:+55292333 Msa1063400:CDS
ACAATACCGCCTAGAATCGC+TGG 0.571926 7_2:-55298301 None:intergenic
TCGGCCACTACTACCACTGT+TGG 0.573495 7_2:-55298436 None:intergenic
TCAAATTGGCCCTTAACTGG+GGG 0.574355 7_2:+55295348 Msa1063400:CDS
TTTACCAGATTTGGAACTGG+TGG 0.575160 7_2:+55297764 Msa1063400:CDS
CAGCACAAGTTTCAGCAGCA+AGG 0.575593 7_2:+55290847 Msa1063400:intron
TCACAGCAAAGCAGGACAAG+TGG 0.577487 7_2:-55297224 None:intergenic
GGTATTGTCAAAGGGTTGAA+AGG 0.577937 7_2:+55298316 Msa1063400:CDS
CACCTTTAACCATGGACAAG+TGG 0.579178 7_2:-55295380 None:intergenic
CTGCCAAGTATAGGAGCAAG+GGG 0.582079 7_2:+55294966 Msa1063400:CDS
ATTGGCGGTGATAACATTGA+AGG 0.582531 7_2:+55291588 Msa1063400:CDS
AGATAAGTCACAAAGTGATA+GGG 0.585441 7_2:+55298742 Msa1063400:intron
GGTCAGTTGTTTGTGTATGG+TGG 0.585640 7_2:+55294637 Msa1063400:CDS
TCCATAATCATCGGAACACA+TGG 0.587707 7_2:-55297844 None:intergenic
TTGTTGATTGCATTTCAGGA+TGG 0.588937 7_2:+55294238 Msa1063400:CDS
GTGGAATTATAAAGTGAACA+TGG 0.590013 7_2:+55297815 Msa1063400:CDS
TTAACCATGGACAAGTGGCT+GGG 0.594772 7_2:-55295375 None:intergenic
CAATGCAGAAAGAAGAATCC+CGG 0.595689 7_2:+55294564 Msa1063400:CDS
TGTGTTCCTTGGTGGTGGAA+AGG 0.595907 7_2:+55294297 Msa1063400:CDS
CTAATGATGATGTAAAGCCA+AGG 0.597325 7_2:+55298786 Msa1063400:CDS
TGAAAATGCGGCATCAGCAG+CGG 0.598708 7_2:-55298155 None:intergenic
GGAAGACTTAAGGTGATTGG+CGG 0.599982 7_2:+55291573 Msa1063400:CDS
AAAGTGATGTAAATAGTCCA+AGG 0.600594 7_2:+55296602 Msa1063400:CDS
AGAACGTTGTCGTGAAGACA+AGG 0.607591 7_2:-55298127 None:intergenic
TTTCACAATATAAATGCAGG+AGG 0.608241 7_2:+55300387 Msa1063400:three_prime_UTR
TGTGATAAAGTTTGATGCCG+AGG 0.610244 7_2:+55292329 Msa1063400:CDS
ATGGATATCCCCAGAGTGTG+TGG 0.616612 7_2:-55297195 None:intergenic
AGTTATGTCGGTGATGAGCA+TGG 0.618124 7_2:+55292297 Msa1063400:intron
TCCTCATGAGAGTTTCCTGA+AGG 0.619317 7_2:-55296637 None:intergenic
TTGTTAAGACCATGGAAAGG+AGG 0.620536 7_2:+55300128 Msa1063400:CDS
CCATGGAAAGGAGGAAATGG+TGG 0.620933 7_2:+55300137 Msa1063400:CDS
GTCAGATTCACTTCCAACAG+TGG 0.622879 7_2:+55298423 Msa1063400:CDS
CTGAAAACTAGCTCAACACC+TGG 0.628293 7_2:+55295312 Msa1063400:CDS
GGAAGTGAATCTGACAAAGA+GGG 0.629100 7_2:-55298415 None:intergenic
TCAGAGAATAAGCCAGCGCA+CGG 0.629437 7_2:+55300057 Msa1063400:intron
ATTGATGATGATGTTGGCGT+AGG 0.632414 7_2:-55290687 None:intergenic
TTCATCGAAAACTCTAGCTG+AGG 0.632853 7_2:+55295187 Msa1063400:CDS
AAACTCCTGCGCAGATACAG+AGG 0.632998 7_2:-55295093 None:intergenic
TAATGATGATGTAAAGCCAA+GGG 0.634140 7_2:+55298787 Msa1063400:CDS
TGGTGGTGATGAAATTGGAT+CGG 0.635254 7_2:+55294654 Msa1063400:CDS
ACTTCCAACAGTGGTAGTAG+TGG 0.637558 7_2:+55298432 Msa1063400:CDS
ATTGCCCACAGCCAGAAGCA+AGG 0.639276 7_2:-55295807 None:intergenic
AACTGTGGTAAATTCATCAG+AGG 0.643998 7_2:+55297151 Msa1063400:CDS
TCCCGGTCATTGTCTTACAA+TGG 0.645986 7_2:+55294581 Msa1063400:CDS
TTGTCAGCTAAATTTCTAAG+GGG 0.648364 7_2:+55292381 Msa1063400:CDS
TGATTATGGACAGATTGTGC+TGG 0.650059 7_2:+55297857 Msa1063400:CDS
GCAAGAAAGCAGCTCAACTG+TGG 0.652840 7_2:+55297136 Msa1063400:CDS
GGAGATCCTTTCCACCACCA+AGG 0.654335 7_2:-55294303 None:intergenic
ATTGTCAAAGGGTTGAAAGG+AGG 0.661007 7_2:+55298319 Msa1063400:CDS
ATTGCGGGAAAGTCATGGTG+CGG 0.662014 7_2:+55293179 Msa1063400:CDS
GCAGTCCATGACGCTCCACA+AGG 0.663227 7_2:+55296247 Msa1063400:intron
ATTTGAAGAGAATGAAAATG+CGG 0.663872 7_2:-55298167 None:intergenic
GAGGAAATCTTGATAATTCG+GGG 0.667669 7_2:-55300271 None:intergenic
ACCTTCAGGAAACTCTCATG+AGG 0.668647 7_2:+55296636 Msa1063400:CDS
CAAGAAACAAGCTTATGGAG+AGG 0.669710 7_2:+55298970 Msa1063400:CDS
TTCAGAAACCACACACTCTG+GGG 0.670158 7_2:+55297187 Msa1063400:CDS
AAACGAGCTTGTTAAGACCA+TGG 0.673577 7_2:+55300120 Msa1063400:CDS
ACCATTGTAAGACAATGACC+GGG 0.689366 7_2:-55294582 None:intergenic
TTTCCCGCAATAAAGGCAGG+AGG 0.704597 7_2:-55293167 None:intergenic
TAACTCTTGAATGGTCATCG+GGG 0.709545 7_2:+55294874 Msa1063400:CDS
AGCTTGTTAAGACCATGGAA+AGG 0.710363 7_2:+55300125 Msa1063400:CDS
AGGGAGAAATTGTTTCAAGG+CGG 0.715664 7_2:+55298761 Msa1063400:CDS
TTGCAGTTCCTACAAAACCA+GGG 0.724437 7_2:+55291816 Msa1063400:intron
ACTGTGCCAGCGATTCTAGG+CGG 0.756920 7_2:+55298295 Msa1063400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAAATTATTTTAAAAAA+CGG + chr7_2:55297639-55297658 Msa1063400:intron 0.0%
!!! TATTAAAGTTGTTATTTTTT+TGG + chr7_2:55291101-55291120 Msa1063400:intron 10.0%
!! TAGAGAAAAAATTAAATTAA+AGG + chr7_2:55294107-55294126 Msa1063400:intron 10.0%
!! AATTTATCAATTATACATAA+TGG - chr7_2:55297722-55297741 None:intergenic 10.0%
!! ATTATGTATAATTGATAAAT+TGG + chr7_2:55297721-55297740 Msa1063400:intron 10.0%
!! TATATTATGTTATATATTTG+TGG + chr7_2:55300227-55300246 Msa1063400:three_prime_UTR 10.0%
!!! GTGTTTTAAGAATAATAATA+TGG - chr7_2:55290662-55290681 None:intergenic 15.0%
!!! TAAAATGGACTAAAAAATTT+AGG + chr7_2:55291173-55291192 Msa1063400:intron 15.0%
!!! AAAATGGACTAAAAAATTTA+GGG + chr7_2:55291174-55291193 Msa1063400:intron 15.0%
!! TTATTATAATTATCTGTGAT+GGG + chr7_2:55291218-55291237 Msa1063400:intron 15.0%
!!! AAATGAGTTTTTTTTTTTGT+TGG + chr7_2:55291267-55291286 Msa1063400:intron 15.0%
!!! TAATTTCTTGTTTTATGTTT+TGG + chr7_2:55292404-55292423 Msa1063400:intron 15.0%
!! AATCATAATTCAAAATTCAA+GGG - chr7_2:55292877-55292896 None:intergenic 15.0%
!! AAATCATAATTCAAAATTCA+AGG - chr7_2:55292878-55292897 None:intergenic 15.0%
!! AAAAAAAATTCTACAAATGA+AGG + chr7_2:55293276-55293295 Msa1063400:intron 15.0%
!!! AAATTTGATTTCTCTAATTA+GGG - chr7_2:55293377-55293396 None:intergenic 15.0%
!! CATTATTAATCACAATTAAT+AGG - chr7_2:55294067-55294086 None:intergenic 15.0%
!! TAAATATTCATATTAAGTGA+AGG + chr7_2:55294756-55294775 Msa1063400:intron 15.0%
!! ATTATTCTATATTTAATCCT+TGG + chr7_2:55295888-55295907 Msa1063400:intron 15.0%
!! ATATATGATATATTCTTACA+GGG + chr7_2:55297350-55297369 Msa1063400:intron 15.0%
!! ACAACAATTACTAAATTTAT+TGG + chr7_2:55297690-55297709 Msa1063400:intron 15.0%
!!! CTTATTAAACTGTTTTTTAA+TGG - chr7_2:55298253-55298272 None:intergenic 15.0%
!!! TTGATTAATTTTTTTGTCAT+TGG - chr7_2:55300354-55300373 None:intergenic 15.0%
!! CATTTATATTGTGAAAAAAT+TGG - chr7_2:55300383-55300402 None:intergenic 15.0%
!! CAATTGTTAGTTAGTTAAAA+TGG + chr7_2:55291158-55291177 Msa1063400:intron 20.0%
!! GGAAAAAAAAATGTTATCTT+GGG + chr7_2:55291195-55291214 Msa1063400:intron 20.0%
!! GTTATTATAATTATCTGTGA+TGG + chr7_2:55291217-55291236 Msa1063400:intron 20.0%
!!! CTCATTTTTCAGAAATTAAA+AGG - chr7_2:55291254-55291273 None:intergenic 20.0%
!! ATTCTTTCAACAATTTATGA+TGG - chr7_2:55291910-55291929 None:intergenic 20.0%
!! TCATAAATTGTTGAAAGAAT+TGG + chr7_2:55291910-55291929 Msa1063400:intron 20.0%
!! AGAATTGGTACATATATAAT+TGG + chr7_2:55291925-55291944 Msa1063400:intron 20.0%
!! ACTATAATATTCAGTTATGT+CGG + chr7_2:55292285-55292304 Msa1063400:intron 20.0%
!! AATGATATAAAGATGACATT+TGG - chr7_2:55292656-55292675 None:intergenic 20.0%
!! ATCACTTGAAATAATAAAGA+TGG - chr7_2:55293014-55293033 None:intergenic 20.0%
!! AATGGAACAAAAAAAAAACT+AGG - chr7_2:55293212-55293231 None:intergenic 20.0%
!!! TAGTTTTTTTTTTGTTCCAT+TGG + chr7_2:55293211-55293230 Msa1063400:intron 20.0%
!!! GAAATTTGATTTCTCTAATT+AGG - chr7_2:55293378-55293397 None:intergenic 20.0%
!!! TATTTTTTGTTGATGAAATC+TGG + chr7_2:55293584-55293603 Msa1063400:intron 20.0%
!! AAGCAAAGATTTCAAATATT+CGG - chr7_2:55293852-55293871 None:intergenic 20.0%
!!! ATATTTTACTACTATTGTCT+TGG + chr7_2:55294003-55294022 Msa1063400:intron 20.0%
!! AGGAGAAAAAAATAAAATCA+TGG + chr7_2:55294127-55294146 Msa1063400:intron 20.0%
!!! TGATGAATATACTTTTTTGT+AGG - chr7_2:55294180-55294199 None:intergenic 20.0%
!!! CATTTTGAATTGATAAAGTT+CGG + chr7_2:55294723-55294742 Msa1063400:intron 20.0%
!! TCTTATCATTGTTCATATTA+TGG + chr7_2:55295250-55295269 Msa1063400:intron 20.0%
!!! AATTGAAAGAGTTTATTTTG+TGG + chr7_2:55295407-55295426 Msa1063400:intron 20.0%
!!! ATTGAAAGAGTTTATTTTGT+GGG + chr7_2:55295408-55295427 Msa1063400:intron 20.0%
!!! ATTTTGAAACAACAATATTG+TGG - chr7_2:55295519-55295538 None:intergenic 20.0%
!! ATAAAAAATCTTTACACTGA+AGG - chr7_2:55295563-55295582 None:intergenic 20.0%
!!! TTAATTGGTTACTTTATCTA+AGG + chr7_2:55295856-55295875 Msa1063400:intron 20.0%
!!! TATTTTATGCACAAATATCA+TGG - chr7_2:55296185-55296204 None:intergenic 20.0%
!! AGTTTAACAATATAAGTCAA+GGG - chr7_2:55296222-55296241 None:intergenic 20.0%
!! AAGTTTAACAATATAAGTCA+AGG - chr7_2:55296223-55296242 None:intergenic 20.0%
!! AATTTCTCAATTGATTAATG+TGG + chr7_2:55296451-55296470 Msa1063400:intron 20.0%
!! AGATACTATTTATCTTATCT+AGG + chr7_2:55296659-55296678 Msa1063400:CDS 20.0%
!! GATACTATTTATCTTATCTA+GGG + chr7_2:55296660-55296679 Msa1063400:CDS 20.0%
!!! ACAATGTGAATACAAATTTT+AGG - chr7_2:55297317-55297336 None:intergenic 20.0%
!! CATATATGATATATTCTTAC+AGG + chr7_2:55297349-55297368 Msa1063400:intron 20.0%
!! ATAATTGATAAATTGGCAAA+TGG + chr7_2:55297728-55297747 Msa1063400:intron 20.0%
!!! ATTAAACTGTTTTTTAATGG+CGG - chr7_2:55298250-55298269 None:intergenic 20.0%
!! AATAATTCTTCACTTTGTAA+TGG + chr7_2:55298546-55298565 Msa1063400:intron 20.0%
!! AAACTATTACTAATCTTTGT+AGG - chr7_2:55298707-55298726 None:intergenic 20.0%
!! TTCATAAAAGCTAAGAAAAT+TGG - chr7_2:55299049-55299068 None:intergenic 20.0%
!! ACAATGTAATGAATTAAGAT+AGG + chr7_2:55299152-55299171 Msa1063400:intron 20.0%
!!! TTATCTTTAGTTTCTTAGAT+AGG + chr7_2:55299351-55299370 Msa1063400:intron 20.0%
!!! TTATCTTTAGTTTCTTAGAT+AGG - chr7_2:55299351-55299370 None:intergenic 20.0%
!! AAATAAGCTCAAGTTATATT+AGG - chr7_2:55299645-55299664 None:intergenic 20.0%
!! TGTATGTAATGAATTAAGAT+AGG - chr7_2:55299680-55299699 None:intergenic 20.0%
!! TGAAAATAGATTATGACATA+AGG + chr7_2:55299767-55299786 Msa1063400:intron 20.0%
!!! TTTTTTCACAATATAAATGC+AGG + chr7_2:55300384-55300403 Msa1063400:three_prime_UTR 20.0%
! AAAAATCATCTCTTTCTTTC+TGG + chr7_2:55290773-55290792 Msa1063400:intron 25.0%
! AAAATCATCTCTTTCTTTCT+GGG + chr7_2:55290774-55290793 Msa1063400:intron 25.0%
! TAGTTTACAATCAACTGAAT+TGG + chr7_2:55290870-55290889 Msa1063400:CDS 25.0%
! AATAACAGAATCAATAGAGA+AGG - chr7_2:55291001-55291020 None:intergenic 25.0%
! GGGAAAAAAAAATGTTATCT+TGG + chr7_2:55291194-55291213 Msa1063400:intron 25.0%
!!! AAAGTAGGTTTTTTAGTTGT+TGG + chr7_2:55291295-55291314 Msa1063400:intron 25.0%
!!! AAGTAGGTTTTTTAGTTGTT+GGG + chr7_2:55291296-55291315 Msa1063400:intron 25.0%
! GTTCCTGATTTAATGTTATA+AGG + chr7_2:55291324-55291343 Msa1063400:intron 25.0%
! ATTAGAACAATCAGACATTA+TGG - chr7_2:55291438-55291457 None:intergenic 25.0%
! ACATCTAACTCTATATCAAT+CGG - chr7_2:55291678-55291697 None:intergenic 25.0%
!! TGAATGTGATATTGATGTTT+TGG + chr7_2:55291780-55291799 Msa1063400:intron 25.0%
!! CTTAAATGATAATGATATCC+AGG + chr7_2:55291854-55291873 Msa1063400:CDS 25.0%
!! TTCAACAATTTATGATGGAA+GGG - chr7_2:55291905-55291924 None:intergenic 25.0%
!! TTTCAACAATTTATGATGGA+AGG - chr7_2:55291906-55291925 None:intergenic 25.0%
! AGAAAAAAGGACTAATTGAA+TGG - chr7_2:55292062-55292081 None:intergenic 25.0%
!!! TCAATTAGTCCTTTTTTCTT+TGG + chr7_2:55292063-55292082 Msa1063400:intron 25.0%
!! CCTTATTTGTTCTTTACAAT+GGG + chr7_2:55292112-55292131 Msa1063400:CDS 25.0%
! AAATAACTAGTAGCAATAAG+AGG - chr7_2:55292225-55292244 None:intergenic 25.0%
! TGCTACTAGTTATTTGAAAA+TGG + chr7_2:55292230-55292249 Msa1063400:intron 25.0%
! ATTTGTCAGCTAAATTTCTA+AGG + chr7_2:55292379-55292398 Msa1063400:CDS 25.0%
! TTTGTCAGCTAAATTTCTAA+GGG + chr7_2:55292380-55292399 Msa1063400:CDS 25.0%
! TTTCGTTGTATAACAATACT+CGG - chr7_2:55292545-55292564 None:intergenic 25.0%
!! AACAATTTTACACAAAAGCA+TGG - chr7_2:55292682-55292701 None:intergenic 25.0%
! TATCAAAAGGATCAAAACAA+TGG - chr7_2:55292732-55292751 None:intergenic 25.0%
!!! GAAATCTGATTTTAGGAAAT+TGG - chr7_2:55292947-55292966 None:intergenic 25.0%
!! ATATCTGGAAATCTGATTTT+AGG - chr7_2:55292954-55292973 None:intergenic 25.0%
! GTTAAACTGAAAGTTATATC+TGG - chr7_2:55292969-55292988 None:intergenic 25.0%
! ATCTGTAGTACATTATTTGA+AGG + chr7_2:55293133-55293152 Msa1063400:intron 25.0%
! TCTGTAGTACATTATTTGAA+GGG + chr7_2:55293134-55293153 Msa1063400:intron 25.0%
! AATTCTACAAATGAAGGAAA+AGG + chr7_2:55293282-55293301 Msa1063400:intron 25.0%
!! TTTTCGTTGTTATCTCTTTT+GGG - chr7_2:55293404-55293423 None:intergenic 25.0%
!! ATTTTCGTTGTTATCTCTTT+TGG - chr7_2:55293405-55293424 None:intergenic 25.0%
!! ATCTGAACTTTTCAAAGATT+AGG + chr7_2:55293423-55293442 Msa1063400:intron 25.0%
! ACTTATGATTTATATTCCGT+AGG + chr7_2:55293945-55293964 Msa1063400:intron 25.0%
! CTTATGATTTATATTCCGTA+GGG + chr7_2:55293946-55293965 Msa1063400:intron 25.0%
!!! TTTTGTTCTAAAATATCAGC+CGG - chr7_2:55294376-55294395 None:intergenic 25.0%
!!! TGATATTTTAGAACAAAACC+TGG + chr7_2:55294378-55294397 Msa1063400:CDS 25.0%
!!! GATATTTTAGAACAAAACCT+GGG + chr7_2:55294379-55294398 Msa1063400:CDS 25.0%
!!! AACAACATTTTTAGATGAAG+TGG - chr7_2:55294530-55294549 None:intergenic 25.0%
! CTTCATCTAAAAATGTTGTT+AGG + chr7_2:55294530-55294549 Msa1063400:CDS 25.0%
! ATGGAATCATTAAAATGCAT+TGG + chr7_2:55294897-55294916 Msa1063400:CDS 25.0%
!!! GTTAAAGATGGATTATTCAT+AGG - chr7_2:55295131-55295150 None:intergenic 25.0%
! TAGCAAATATAAGACAAGAT+TGG - chr7_2:55295474-55295493 None:intergenic 25.0%
!! TCTTATATTTGCTACATAGA+AGG + chr7_2:55295480-55295499 Msa1063400:intron 25.0%
! TGTCAGAAATCTTTCTTAAT+TGG + chr7_2:55295841-55295860 Msa1063400:intron 25.0%
! TAAAAATCCAATAGCAAGTT+TGG - chr7_2:55296350-55296369 None:intergenic 25.0%
!! GTTGATTCCTTTAAATGTAA+TGG - chr7_2:55296739-55296758 None:intergenic 25.0%
! GCAATTTCAATGTATGTTAT+AGG + chr7_2:55296760-55296779 Msa1063400:intron 25.0%
! ATTTCATCAAGAACACAATA+TGG + chr7_2:55296792-55296811 Msa1063400:intron 25.0%
! AAAATCTCTTAGAATCTATG+AGG - chr7_2:55297015-55297034 None:intergenic 25.0%
!! AACATTCAAAATCTTGCTAT+TGG + chr7_2:55297399-55297418 Msa1063400:CDS 25.0%
!! AAGAAAGATGACAAATTTTG+TGG + chr7_2:55297434-55297453 Msa1063400:CDS 25.0%
!! AGAAAGATGACAAATTTTGT+GGG + chr7_2:55297435-55297454 Msa1063400:CDS 25.0%
! GTATGCTTGATAAGAAAATA+CGG + chr7_2:55297530-55297549 Msa1063400:intron 25.0%
! GGAAATTATCAACATAAGAT+AGG - chr7_2:55297936-55297955 None:intergenic 25.0%
!!! ATCTTATGTTGATAATTTCC+AGG + chr7_2:55297936-55297955 Msa1063400:intron 25.0%
! GTTAAGATGGATAAAAGAAA+AGG + chr7_2:55298060-55298079 Msa1063400:intron 25.0%
!!! GGACATTTCTATTTTATTTC+AGG + chr7_2:55298089-55298108 Msa1063400:intron 25.0%
! ATTTGAAGAGAATGAAAATG+CGG - chr7_2:55298170-55298189 None:intergenic 25.0%
! TTCAAATCAGAAGAAAAAAC+AGG + chr7_2:55298183-55298202 Msa1063400:CDS 25.0%
!!! TTCTGTTTGTTTTTAACATC+AGG - chr7_2:55298650-55298669 None:intergenic 25.0%
! GATGTTAAAAACAAACAGAA+AGG + chr7_2:55298650-55298669 Msa1063400:CDS 25.0%
! AAAAGTGAAAACAGAAAGAA+TGG - chr7_2:55298872-55298891 None:intergenic 25.0%
! ATAAACTATTGTCTGATTTC+AGG + chr7_2:55298923-55298942 Msa1063400:intron 25.0%
! TGAGCTTATTCTATTCTATT+GGG - chr7_2:55299178-55299197 None:intergenic 25.0%
! TTGAGCTTATTCTATTCTAT+TGG - chr7_2:55299179-55299198 None:intergenic 25.0%
! GAATAAGCTCAAGTTATATT+AGG + chr7_2:55299187-55299206 Msa1063400:intron 25.0%
! AATGCCAATGCTATAAATAT+TGG + chr7_2:55299279-55299298 Msa1063400:intron 25.0%
! CATTCCAATATTTATAGCAT+TGG - chr7_2:55299286-55299305 None:intergenic 25.0%
! AATGTCAGTGCTATAAATAT+TGG - chr7_2:55299553-55299572 None:intergenic 25.0%
!!! TTGAGCTTATTTTATTCTAC+TGG + chr7_2:55299653-55299672 Msa1063400:intron 25.0%
!!! TGAGCTTATTTTATTCTACT+GGG + chr7_2:55299654-55299673 Msa1063400:intron 25.0%
!!! AACTATTTCTACAATCAAAG+AGG + chr7_2:55299719-55299738 Msa1063400:intron 25.0%
!!! ACTATTTCTACAATCAAAGA+GGG + chr7_2:55299720-55299739 Msa1063400:intron 25.0%
! TAGAGAAGCTTATAGAAATA+AGG + chr7_2:55299794-55299813 Msa1063400:intron 25.0%
! TTGAAAGAGCTTATCAAAAT+AGG - chr7_2:55299839-55299858 None:intergenic 25.0%
! ACTTATTGGAACTTATCTTA+TGG - chr7_2:55299883-55299902 None:intergenic 25.0%
!! TTTAGAACCATTTAGAATCA+TGG - chr7_2:55300012-55300031 None:intergenic 25.0%
! AAAAGACAATGCTACAAAAA+GGG - chr7_2:55300296-55300315 None:intergenic 25.0%
!!! ATGGTTTTGCTTTGTTTTGT+TGG - chr7_2:55290643-55290662 None:intergenic 30.0%
!! TGATGAATTGATGATGATGT+TGG - chr7_2:55290696-55290715 None:intergenic 30.0%
! TAACAATCTTTTCGCAAACA+TGG - chr7_2:55290721-55290740 None:intergenic 30.0%
! TGATTTTTCTTACGTTGTGA+TGG - chr7_2:55290761-55290780 None:intergenic 30.0%
!! ATTCAACGACTTTTAGCTAT+TGG + chr7_2:55290955-55290974 Msa1063400:CDS 30.0%
CTAACAATTGTTTCATGCAA+TGG - chr7_2:55291148-55291167 None:intergenic 30.0%
!! TTTTTGTTGGTGAGTAAAGT+AGG + chr7_2:55291280-55291299 Msa1063400:intron 30.0%
!!! AGTAGGTTTTTTAGTTGTTG+GGG + chr7_2:55291297-55291316 Msa1063400:intron 30.0%
CATAATCATTGTCCGTTATT+AGG + chr7_2:55291379-55291398 Msa1063400:intron 30.0%
AATGTCTGATTGTTCTAATC+TGG + chr7_2:55291439-55291458 Msa1063400:intron 30.0%
TATTGTGAGATATATGTAGC+TGG + chr7_2:55291483-55291502 Msa1063400:intron 30.0%
ACAACTTCCTTACAAATACT+TGG + chr7_2:55291629-55291648 Msa1063400:CDS 30.0%
GATATAGAGTTAGATGTTCT+TGG + chr7_2:55291681-55291700 Msa1063400:intron 30.0%
! TCAACAATTTATGATGGAAG+GGG - chr7_2:55291904-55291923 None:intergenic 30.0%
!! GCCTTATTTGTTCTTTACAA+TGG + chr7_2:55292111-55292130 Msa1063400:CDS 30.0%
CCCATTGTAAAGAACAAATA+AGG - chr7_2:55292115-55292134 None:intergenic 30.0%
CAAACTTTATCACAGAAAAC+AGG - chr7_2:55292323-55292342 None:intergenic 30.0%
TTGTCAGCTAAATTTCTAAG+GGG + chr7_2:55292381-55292400 Msa1063400:CDS 30.0%
TTGCAGATCATGGTAAATAT+TGG - chr7_2:55292568-55292587 None:intergenic 30.0%
ATAAAGATGACATTTGGACA+TGG - chr7_2:55292650-55292669 None:intergenic 30.0%
AAAGAATTCCAACAATTGGT+TGG - chr7_2:55292784-55292803 None:intergenic 30.0%
TGTGAAAGAATTCCAACAAT+TGG - chr7_2:55292788-55292807 None:intergenic 30.0%
TTTCACAACCTTATTCTTCT+GGG + chr7_2:55292801-55292820 Msa1063400:CDS 30.0%
AGGAAATTGGATTCTTCTAT+TGG - chr7_2:55292934-55292953 None:intergenic 30.0%
CTGTAGTACATTATTTGAAG+GGG + chr7_2:55293135-55293154 Msa1063400:intron 30.0%
!!! AGTTCCTCTTTTTCAATTTG+GGG - chr7_2:55293466-55293485 None:intergenic 30.0%
!!! GAGTTCCTCTTTTTCAATTT+GGG - chr7_2:55293467-55293486 None:intergenic 30.0%
CAAATTGAAAAAGAGGAACT+CGG + chr7_2:55293466-55293485 Msa1063400:intron 30.0%
CAAAGATTTCAAATATTCGG+TGG - chr7_2:55293849-55293868 None:intergenic 30.0%
TAAAATCATGGAGAATCGAT+CGG + chr7_2:55294139-55294158 Msa1063400:intron 30.0%
!!! TACTTTTTTGTAGGAGAATC+AGG - chr7_2:55294171-55294190 None:intergenic 30.0%
TCTCATCTTCATCTTTCAAT+TGG - chr7_2:55294327-55294346 None:intergenic 30.0%
AAGAAATAAGTGCTCTTTGT+TGG + chr7_2:55294407-55294426 Msa1063400:CDS 30.0%
AGAAATAAGTGCTCTTTGTT+GGG + chr7_2:55294408-55294427 Msa1063400:CDS 30.0%
!! TTTTAGATGAAGTGGTTTGT+TGG - chr7_2:55294522-55294541 None:intergenic 30.0%
ATTATGAGATTTGTGACTAC+TGG - chr7_2:55294608-55294627 None:intergenic 30.0%
AAATCTCATAATGATTGCAC+TGG + chr7_2:55294616-55294635 Msa1063400:CDS 30.0%
!! AATCAACGAATTGTTTCTAC+TGG + chr7_2:55294784-55294803 Msa1063400:intron 30.0%
TCAAGAGTTAAAACCTGTAA+AGG - chr7_2:55294864-55294883 None:intergenic 30.0%
!!! TACAGGTTTTAACTCTTGAA+TGG + chr7_2:55294865-55294884 Msa1063400:intron 30.0%
TTTAACTCTTGAATGGTCAT+CGG + chr7_2:55294872-55294891 Msa1063400:CDS 30.0%
! TTGATTTTACTGCCAAGTAT+AGG + chr7_2:55294957-55294976 Msa1063400:CDS 30.0%
CATAATAGTGTATTTGTCCA+GGG - chr7_2:55295028-55295047 None:intergenic 30.0%
TCATAATAGTGTATTTGTCC+AGG - chr7_2:55295029-55295048 None:intergenic 30.0%
TTATTCATAGGTATTAGCAC+TGG - chr7_2:55295119-55295138 None:intergenic 30.0%
! AGTTTTGCTACAGTTAAAGA+TGG - chr7_2:55295143-55295162 None:intergenic 30.0%
TTCGATGAATTTAACTGACT+TGG - chr7_2:55295176-55295195 None:intergenic 30.0%
!! TATTTTGTGGGCTATTCTAA+TGG + chr7_2:55295420-55295439 Msa1063400:intron 30.0%
!!! TTTTTGTTTCTGTGACAAAC+TGG - chr7_2:55295976-55295995 None:intergenic 30.0%
GTCACAGAAACAAAAAATGA+AGG + chr7_2:55295980-55295999 Msa1063400:CDS 30.0%
! AAAAATCTAGCCTTCTACAA+TGG - chr7_2:55296021-55296040 None:intergenic 30.0%
AAAAGGAACAAGAATGAAGA+AGG - chr7_2:55296132-55296151 None:intergenic 30.0%
GAAAAAACAGCACTAAAATG+AGG - chr7_2:55296280-55296299 None:intergenic 30.0%
!!! CTTGCTATTGGATTTTTAAG+TGG + chr7_2:55296352-55296371 Msa1063400:CDS 30.0%
ATCAACTTTGCTAACAAGAA+AGG - chr7_2:55296414-55296433 None:intergenic 30.0%
!! TCTGTTTTGTTCTTGATTGA+CGG + chr7_2:55296520-55296539 Msa1063400:CDS 30.0%
AAAGTGATGTAAATAGTCCA+AGG + chr7_2:55296602-55296621 Msa1063400:CDS 30.0%
CTATTTATCTTATCTAGGGA+TGG + chr7_2:55296664-55296683 Msa1063400:CDS 30.0%
TGGAAAAATTAGTGTAGTTG+AGG + chr7_2:55296684-55296703 Msa1063400:CDS 30.0%
GGAAAAATTAGTGTAGTTGA+GGG + chr7_2:55296685-55296704 Msa1063400:CDS 30.0%
ATTCCTTTAAATGTAATGGC+CGG - chr7_2:55296735-55296754 None:intergenic 30.0%
AAAATTTCCAATGATATGCC+AGG - chr7_2:55296834-55296853 None:intergenic 30.0%
CTGGAATTCATTTGAGAAAA+TGG - chr7_2:55296946-55296965 None:intergenic 30.0%
! ACAAATTTTAGGCGATAAAC+TGG - chr7_2:55297306-55297325 None:intergenic 30.0%
! AGACTGGAACATTTGAAATA+AGG + chr7_2:55297474-55297493 Msa1063400:CDS 30.0%
!!! AAGCACTGGTTTTATTCTTT+TGG + chr7_2:55297500-55297519 Msa1063400:intron 30.0%
CATTGCTGTAGAAAAACAAA+GGG + chr7_2:55297578-55297597 Msa1063400:intron 30.0%
!!! GCTCTTTATTGTCGATTTTA+AGG + chr7_2:55297793-55297812 Msa1063400:CDS 30.0%
!!! CTTTATTGTCGATTTTAAGG+TGG + chr7_2:55297796-55297815 Msa1063400:CDS 30.0%
GTGGAATTATAAAGTGAACA+TGG + chr7_2:55297815-55297834 Msa1063400:CDS 30.0%
! CCTCACAAATTTGAAAGTAT+TGG - chr7_2:55297894-55297913 None:intergenic 30.0%
CCAATACTTTCAAATTTGTG+AGG + chr7_2:55297891-55297910 Msa1063400:intron 30.0%
AAGATAGGCACATAAAGAAA+TGG - chr7_2:55297921-55297940 None:intergenic 30.0%
ATCTTTGCCATTCTTTAATG+AGG + chr7_2:55298016-55298035 Msa1063400:intron 30.0%
GTTATCTCCTCATTAAAGAA+TGG - chr7_2:55298026-55298045 None:intergenic 30.0%
!! TTTTTAATGGCGGAAACTTT+AGG - chr7_2:55298240-55298259 None:intergenic 30.0%
AAAATTCCAACCTCCAATTT+CGG + chr7_2:55298367-55298386 Msa1063400:CDS 30.0%
! TCAAAATAGAGCATGCTTTT+AGG - chr7_2:55298575-55298594 None:intergenic 30.0%
AGATAAGTCACAAAGTGATA+GGG + chr7_2:55298742-55298761 Msa1063400:intron 30.0%
! TAATGATGATGTAAAGCCAA+GGG + chr7_2:55298787-55298806 Msa1063400:CDS 30.0%
TCAAACAAGAAACAAGCTTA+TGG + chr7_2:55298965-55298984 Msa1063400:CDS 30.0%
CATGATTGTCTTGAAGAATT+AGG - chr7_2:55299084-55299103 None:intergenic 30.0%
! AGAAAGTATATGATGCACTA+AGG + chr7_2:55299116-55299135 Msa1063400:intron 30.0%
TTATATTAGGTGATGAGTCA+TGG + chr7_2:55299200-55299219 Msa1063400:intron 30.0%
TAACCAATGACTCATCATAA+TGG - chr7_2:55299582-55299601 None:intergenic 30.0%
TAACCAATGACTCATCATAA+TGG + chr7_2:55299582-55299601 Msa1063400:intron 30.0%
ATGAGTCATGGTATTCTATA+AGG - chr7_2:55299620-55299639 None:intergenic 30.0%
TTATATTAGGTGATGAGTCA+TGG - chr7_2:55299200-55299219 None:intergenic 30.0%
TACAATCAAAGAGGGAATAA+GGG + chr7_2:55299728-55299747 Msa1063400:intron 30.0%
ATTGTCATGCATAGTACATA+AGG + chr7_2:55299954-55299973 Msa1063400:intron 30.0%
GAAAAGACAATGCTACAAAA+AGG - chr7_2:55300297-55300316 None:intergenic 30.0%
! GTAGCATTGTCTTTTCTTTT+TGG + chr7_2:55300301-55300320 Msa1063400:three_prime_UTR 30.0%
TTTCACAATATAAATGCAGG+AGG + chr7_2:55300387-55300406 Msa1063400:three_prime_UTR 30.0%
CCATAGTGAATCACAATTCT+TGG - chr7_2:55290898-55290917 None:intergenic 35.0%
CCAAGAATTGTGATTCACTA+TGG + chr7_2:55290895-55290914 Msa1063400:CDS 35.0%
GCGCCTTATAACATTAAATC+AGG - chr7_2:55291330-55291349 None:intergenic 35.0%
AAAAACCGTCTGCCTAATAA+CGG - chr7_2:55291394-55291413 None:intergenic 35.0%
! ATCTGGTGATGTTTGAAAGA+TGG + chr7_2:55291456-55291475 Msa1063400:intron 35.0%
TGGAAAATGCATGTCGTAAT+AGG + chr7_2:55291503-55291522 Msa1063400:intron 35.0%
GCTCATACTGCTTAGTTTAA+TGG + chr7_2:55291543-55291562 Msa1063400:intron 35.0%
ATACTGCTTAGTTTAATGGC+AGG + chr7_2:55291547-55291566 Msa1063400:intron 35.0%
TACTGCTTAGTTTAATGGCA+GGG + chr7_2:55291548-55291567 Msa1063400:intron 35.0%
ACTTCCTTACAAATACTTGG+AGG + chr7_2:55291632-55291651 Msa1063400:CDS 35.0%
!!! CTAAATATCCCTGGTTTTGT+AGG - chr7_2:55291827-55291846 None:intergenic 35.0%
CAAAACCAGGGATATTTAGT+TGG + chr7_2:55291828-55291847 Msa1063400:CDS 35.0%
GACAGAAAAGGAAATTTACC+TGG - chr7_2:55291875-55291894 None:intergenic 35.0%
TTGACTTCCTAGCTCATTAT+AGG + chr7_2:55292010-55292029 Msa1063400:intron 35.0%
ATCACAACCTATAATGAGCT+AGG - chr7_2:55292020-55292039 None:intergenic 35.0%
!!! TTAGTCCTTTTTTCTTTGGC+AGG + chr7_2:55292067-55292086 Msa1063400:intron 35.0%
GACAGAAAAAGCGGTAATAT+TGG - chr7_2:55292141-55292160 None:intergenic 35.0%
CATAGCATGTGTATTGCATT+GGG - chr7_2:55292621-55292640 None:intergenic 35.0%
ACATAGCATGTGTATTGCAT+TGG - chr7_2:55292622-55292641 None:intergenic 35.0%
! ATCCTTTTGATAGAAACTGC+CGG + chr7_2:55292740-55292759 Msa1063400:intron 35.0%
CTTTCACAACCTTATTCTTC+TGG + chr7_2:55292800-55292819 Msa1063400:CDS 35.0%
TTCTTCTATTGGCATTGCTT+TGG - chr7_2:55292923-55292942 None:intergenic 35.0%
GCACAGTTTAAATCATCCAA+TGG - chr7_2:55293230-55293249 None:intergenic 35.0%
TGAATTTCAATAATGCCACG+TGG - chr7_2:55293252-55293271 None:intergenic 35.0%
! AGCCTTCTGATATTTGGAAT+GGG + chr7_2:55293328-55293347 Msa1063400:intron 35.0%
! TTTTCAATTTGGGGGTTCTT+TGG - chr7_2:55293457-55293476 None:intergenic 35.0%
!!! GTTCCTCTTTTTCAATTTGG+GGG - chr7_2:55293465-55293484 None:intergenic 35.0%
!!! CGAGTTCCTCTTTTTCAATT+TGG - chr7_2:55293468-55293487 None:intergenic 35.0%
! CTAGCATAATCTATTTGCTG+GGG - chr7_2:55293550-55293569 None:intergenic 35.0%
CCTAGCATAATCTATTTGCT+GGG - chr7_2:55293551-55293570 None:intergenic 35.0%
ACCTAGCATAATCTATTTGC+TGG - chr7_2:55293552-55293571 None:intergenic 35.0%
CAAATAGATTATGCTAGGTC+TGG + chr7_2:55293553-55293572 Msa1063400:intron 35.0%
TGATTGTTTAATCGATCCGA+TGG + chr7_2:55293682-55293701 Msa1063400:intron 35.0%
TCACTTTATCGTGAGAAAGT+CGG - chr7_2:55293730-55293749 None:intergenic 35.0%
! CAGTCAGCTTTCAAAGATTT+TGG - chr7_2:55293802-55293821 None:intergenic 35.0%
AAGCCGTGTAAAGAAATCTT+GGG + chr7_2:55293873-55293892 Msa1063400:intron 35.0%
AGTCCCAAGATTTCTTTACA+CGG - chr7_2:55293879-55293898 None:intergenic 35.0%
! CAGATTGTTGATTGCATTTC+AGG + chr7_2:55294234-55294253 Msa1063400:intron 35.0%
! TTGTTGATTGCATTTCAGGA+TGG + chr7_2:55294238-55294257 Msa1063400:CDS 35.0%
GAAGCTAAAATTGTGTTCCT+TGG + chr7_2:55294286-55294305 Msa1063400:CDS 35.0%
TAAAATATCAGCCGGAAGAT+TGG - chr7_2:55294368-55294387 None:intergenic 35.0%
! CACTTATTTCTTTATCTCCC+AGG - chr7_2:55294399-55294418 None:intergenic 35.0%
! TAGATGGAGATATCCTGTTT+TGG + chr7_2:55294467-55294486 Msa1063400:CDS 35.0%
!!! TTTTCTTAGTTTGCGTGCAT+TGG + chr7_2:55294814-55294833 Msa1063400:intron 35.0%
GAGAGACACGTTAAAGTTTA+GGG - chr7_2:55294842-55294861 None:intergenic 35.0%
TTAACTCTTGAATGGTCATC+GGG + chr7_2:55294873-55294892 Msa1063400:CDS 35.0%
CATTAATGTCTGAGCAGAAT+AGG + chr7_2:55295066-55295085 Msa1063400:CDS 35.0%
TATGAACAATGATAAGAGCC+AGG - chr7_2:55295247-55295266 None:intergenic 35.0%
CAACTTCTTTCGTTTACCTT+AGG + chr7_2:55295278-55295297 Msa1063400:intron 35.0%
GTTCAGCTTCTTGTTCAAAT+TGG + chr7_2:55295334-55295353 Msa1063400:CDS 35.0%
ATAAGACAAGATTGGATGTG+TGG - chr7_2:55295466-55295485 None:intergenic 35.0%
! TATTTGCTACATAGAAGGAG+AGG + chr7_2:55295485-55295504 Msa1063400:intron 35.0%
! AAATTTCCTGTGTGTTTTGC+AGG + chr7_2:55295721-55295740 Msa1063400:intron 35.0%
! CAAAAGTCCAATTTTGTCAC+TGG - chr7_2:55295779-55295798 None:intergenic 35.0%
ATCTTAAAGACTGCTCTGAT+GGG + chr7_2:55295942-55295961 Msa1063400:CDS 35.0%
TGATGACAGAATCGATAGTT+TGG - chr7_2:55296095-55296114 None:intergenic 35.0%
GCAAAAGATAATGCTTGTAC+TGG - chr7_2:55296316-55296335 None:intergenic 35.0%
! GCATTATCTTTTGCAAACTC+TGG + chr7_2:55296322-55296341 Msa1063400:CDS 35.0%
TGGATCAATTACTTCTTTCC+AGG + chr7_2:55296471-55296490 Msa1063400:intron 35.0%
TCAATTACTTCTTTCCAGGT+TGG + chr7_2:55296475-55296494 Msa1063400:intron 35.0%
AAGCTCACCAATTACTTCAT+TGG + chr7_2:55296555-55296574 Msa1063400:CDS 35.0%
! CACCAATTACTTCATTGGTT+TGG + chr7_2:55296560-55296579 Msa1063400:CDS 35.0%
CTCCAAACCAATGAAGTAAT+TGG - chr7_2:55296565-55296584 None:intergenic 35.0%
AACTGTGGTAAATTCATCAG+AGG + chr7_2:55297151-55297170 Msa1063400:CDS 35.0%
! ATGAATTTTCACAGCAAAGC+AGG - chr7_2:55297235-55297254 None:intergenic 35.0%
TTTAGGCGATAAACTGGTAA+TGG - chr7_2:55297300-55297319 None:intergenic 35.0%
TAAGAAACCGATACGAAAAG+TGG + chr7_2:55297376-55297395 Msa1063400:CDS 35.0%
!! GAATGTTCCACTTTTCGTAT+CGG - chr7_2:55297386-55297405 None:intergenic 35.0%
ATTCTATCATTGCTTCAGAC+TGG + chr7_2:55297458-55297477 Msa1063400:CDS 35.0%
! TTGAAATAAGGTGAAAGCAC+TGG + chr7_2:55297486-55297505 Msa1063400:intron 35.0%
GCATTGCTGTAGAAAAACAA+AGG + chr7_2:55297577-55297596 Msa1063400:intron 35.0%
GTACAGATCTTTACCAGATT+TGG + chr7_2:55297755-55297774 Msa1063400:intron 35.0%
! ATCTTTACCAGATTTGGAAC+TGG + chr7_2:55297761-55297780 Msa1063400:CDS 35.0%
CACAATCTGTCCATAATCAT+CGG - chr7_2:55297856-55297875 None:intergenic 35.0%
!! GTTGATAATTTCCAGGCTAA+TGG + chr7_2:55297943-55297962 Msa1063400:intron 35.0%
GCATTCATCTCATTATTAGC+TGG + chr7_2:55297976-55297995 Msa1063400:CDS 35.0%
TAGCTGGAGAAAATGAATTC+AGG + chr7_2:55297992-55298011 Msa1063400:CDS 35.0%
GAGATAACAGTGTAAACTAC+TGG + chr7_2:55298038-55298057 Msa1063400:intron 35.0%
! GTGTAAACTACTGGTTAAGA+TGG + chr7_2:55298047-55298066 Msa1063400:intron 35.0%
GGATAAAAGAAAAGGCTGAA+CGG + chr7_2:55298068-55298087 Msa1063400:intron 35.0%
ATGTTCCAAATGACCGAAAT+TGG - chr7_2:55298383-55298402 None:intergenic 35.0%
CAGATAAGTCACAAAGTGAT+AGG + chr7_2:55298741-55298760 Msa1063400:intron 35.0%
GATAGGGAGAAATTGTTTCA+AGG + chr7_2:55298758-55298777 Msa1063400:CDS 35.0%
! CTAATGATGATGTAAAGCCA+AGG + chr7_2:55298786-55298805 Msa1063400:CDS 35.0%
CAGAACACCTGAAGAAATTA+TGG + chr7_2:55298811-55298830 Msa1063400:CDS 35.0%
TAAGCAGCCATAATTTCTTC+AGG - chr7_2:55298821-55298840 None:intergenic 35.0%
! AAGCTTGTTTCTTGTTTGAG+AGG - chr7_2:55298964-55298983 None:intergenic 35.0%
ATGAGTCATGGTATTCTAGA+AGG + chr7_2:55299212-55299231 Msa1063400:intron 35.0%
GATCCATTATGATGAGTCAT+TGG + chr7_2:55299244-55299263 Msa1063400:intron 35.0%
GATGTTCATCACCTATCAAT+TGG + chr7_2:55299401-55299420 Msa1063400:intron 35.0%
!! CAATGAAAGCACCAATTGAT+AGG - chr7_2:55299415-55299434 None:intergenic 35.0%
GATCCATTATGATGAGTCAT+TGG - chr7_2:55299244-55299263 None:intergenic 35.0%
CATGGTATTCTATAAGGATC+TGG - chr7_2:55299614-55299633 None:intergenic 35.0%
CTACAATCAAAGAGGGAATA+AGG + chr7_2:55299727-55299746 Msa1063400:intron 35.0%
AAACAAACAATAGCCAAGAC+TGG - chr7_2:55299913-55299932 None:intergenic 35.0%
GTCGTTACCATGATTCTAAA+TGG + chr7_2:55300002-55300021 Msa1063400:intron 35.0%
! AATTTTCAGCTCCATTTTGC+AGG - chr7_2:55300087-55300106 None:intergenic 35.0%
! GAGGAAATCTTGATAATTCG+GGG - chr7_2:55300274-55300293 None:intergenic 35.0%
! GGAGGAAATCTTGATAATTC+GGG - chr7_2:55300275-55300294 None:intergenic 35.0%
! GGGAGGAAATCTTGATAATT+CGG - chr7_2:55300276-55300295 None:intergenic 35.0%
!! ATTGATGATGATGTTGGCGT+AGG - chr7_2:55290690-55290709 None:intergenic 40.0%
ATTGTCCGTTATTAGGCAGA+CGG + chr7_2:55291386-55291405 Msa1063400:intron 40.0%
! TGCATGTCGTAATAGGTTGA+TGG + chr7_2:55291510-55291529 Msa1063400:intron 40.0%
GATGGAAGACTTAAGGTGAT+TGG + chr7_2:55291570-55291589 Msa1063400:CDS 40.0%
ATTGGCGGTGATAACATTGA+AGG + chr7_2:55291588-55291607 Msa1063400:CDS 40.0%
CGTACCTCCAAGTATTTGTA+AGG - chr7_2:55291639-55291658 None:intergenic 40.0%
! TACAAATACTTGGAGGTACG+TGG + chr7_2:55291639-55291658 Msa1063400:intron 40.0%
TTGCAGTTCCTACAAAACCA+GGG + chr7_2:55291816-55291835 Msa1063400:intron 40.0%
AGACTCCAACTAAATATCCC+TGG - chr7_2:55291836-55291855 None:intergenic 40.0%
AAGGGGAAATGAGACAGAAA+AGG - chr7_2:55291887-55291906 None:intergenic 40.0%
CCAAACCTGCCAAAGAAAAA+AGG - chr7_2:55292075-55292094 None:intergenic 40.0%
!!! CCTTTTTTCTTTGGCAGGTT+TGG + chr7_2:55292072-55292091 Msa1063400:intron 40.0%
TGTGATAAAGTTTGATGCCG+AGG + chr7_2:55292329-55292348 Msa1063400:CDS 40.0%
ATAAAGTTTGATGCCGAGGA+AGG + chr7_2:55292333-55292352 Msa1063400:CDS 40.0%
CTTCAAAAGTTGTCCTTCCT+CGG - chr7_2:55292349-55292368 None:intergenic 40.0%
! ATCTCGTCAATCTTTTGCGT+TGG + chr7_2:55292478-55292497 Msa1063400:intron 40.0%
GTGTTGTCAATTGCAGATCA+TGG - chr7_2:55292578-55292597 None:intergenic 40.0%
ATGTGTATTGCATTGGGTCT+CGG - chr7_2:55292615-55292634 None:intergenic 40.0%
! TCCTTTTGATAGAAACTGCC+GGG + chr7_2:55292741-55292760 Msa1063400:intron 40.0%
! AACCTTATTCTTCTGGGAAC+AGG + chr7_2:55292807-55292826 Msa1063400:CDS 40.0%
! GTGTGTGTAATTTGTCTGCA+TGG + chr7_2:55293085-55293104 Msa1063400:intron 40.0%
ATGATTTAAACTGTGCCACG+TGG + chr7_2:55293234-55293253 Msa1063400:intron 40.0%
GAGCCTTCTGATATTTGGAA+TGG + chr7_2:55293327-55293346 Msa1063400:intron 40.0%
! TGATATTTGGAATGGGCGAT+TGG + chr7_2:55293335-55293354 Msa1063400:intron 40.0%
!! CGTTGTTATCTCTTTTGGGT+GGG - chr7_2:55293400-55293419 None:intergenic 40.0%
! TCGTTGTTATCTCTTTTGGG+TGG - chr7_2:55293401-55293420 None:intergenic 40.0%
GAACCCCCAAATTGAAAAAG+AGG + chr7_2:55293459-55293478 Msa1063400:intron 40.0%
CCCAGCAAATAGATTATGCT+AGG + chr7_2:55293548-55293567 Msa1063400:intron 40.0%
! TTTCCCTCTTTTTGGACCAT+CGG - chr7_2:55293701-55293720 None:intergenic 40.0%
ACTTTATCGTGAGAAAGTCG+GGG - chr7_2:55293728-55293747 None:intergenic 40.0%
CACTTTATCGTGAGAAAGTC+GGG - chr7_2:55293729-55293748 None:intergenic 40.0%
TGCTTCTCGTCAAATGGAAA+CGG - chr7_2:55293757-55293776 None:intergenic 40.0%
CATACATGCTTCTCGTCAAA+TGG - chr7_2:55293763-55293782 None:intergenic 40.0%
GAAGCCGTGTAAAGAAATCT+TGG + chr7_2:55293872-55293891 Msa1063400:intron 40.0%
AGAACATACATGCTTCCCTA+CGG - chr7_2:55293964-55293983 None:intergenic 40.0%
GAAGCATGTATGTTCTGTCA+TGG + chr7_2:55293771-55293790 Msa1063400:intron 40.0%
!! AGGATGGACTGCTAATTCTT+TGG + chr7_2:55294254-55294273 Msa1063400:CDS 40.0%
!! GGATGGACTGCTAATTCTTT+GGG + chr7_2:55294255-55294274 Msa1063400:CDS 40.0%
GCTAAAATTGTGTTCCTTGG+TGG + chr7_2:55294289-55294308 Msa1063400:CDS 40.0%
AAAATTGTGTTCCTTGGTGG+TGG + chr7_2:55294292-55294311 Msa1063400:CDS 40.0%
TGAAACAAACGCCAATCTTC+CGG + chr7_2:55294354-55294373 Msa1063400:CDS 40.0%
TAAGTATCCAACAGCGAGAA+TGG - chr7_2:55294449-55294468 None:intergenic 40.0%
CAATGCAGAAAGAAGAATCC+CGG + chr7_2:55294564-55294583 Msa1063400:CDS 40.0%
ACCATTGTAAGACAATGACC+GGG - chr7_2:55294585-55294604 None:intergenic 40.0%
GACCATTGTAAGACAATGAC+CGG - chr7_2:55294586-55294605 None:intergenic 40.0%
ACTGGTCAGTTGTTTGTGTA+TGG + chr7_2:55294634-55294653 Msa1063400:CDS 40.0%
! GTGTATGGTGGTGATGAAAT+TGG + chr7_2:55294649-55294668 Msa1063400:CDS 40.0%
! TGGTGGTGATGAAATTGGAT+CGG + chr7_2:55294654-55294673 Msa1063400:CDS 40.0%
GGAGAGACACGTTAAAGTTT+AGG - chr7_2:55294843-55294862 None:intergenic 40.0%
TTAACGTGTCTCTCCTTTAC+AGG + chr7_2:55294848-55294867 Msa1063400:intron 40.0%
TAACTCTTGAATGGTCATCG+GGG + chr7_2:55294874-55294893 Msa1063400:CDS 40.0%
!! CGAAAGTGCCATTAAGTGTA+AGG - chr7_2:55294932-55294951 None:intergenic 40.0%
!! CTTTTTGTACTGACAAACCC+TGG + chr7_2:55295008-55295027 Msa1063400:CDS 40.0%
TTCATCGAAAACTCTAGCTG+AGG + chr7_2:55295187-55295206 Msa1063400:CDS 40.0%
TCAGTACTTTCTGCTAAACC+TGG + chr7_2:55295226-55295245 Msa1063400:intron 40.0%
!!! TGAGCTAGTTTTCAGAACTG+CGG - chr7_2:55295307-55295326 None:intergenic 40.0%
TTTGAACAAGAAGCTGAACC+AGG - chr7_2:55295333-55295352 None:intergenic 40.0%
TGTTCAAATTGGCCCTTAAC+TGG + chr7_2:55295345-55295364 Msa1063400:CDS 40.0%
GTTCAAATTGGCCCTTAACT+GGG + chr7_2:55295346-55295365 Msa1063400:CDS 40.0%
TTCAAATTGGCCCTTAACTG+GGG + chr7_2:55295347-55295366 Msa1063400:CDS 40.0%
AATTCCAGCACCTTTAACCA+TGG - chr7_2:55295391-55295410 None:intergenic 40.0%
CATTAACCTGCAAAACACAC+AGG - chr7_2:55295730-55295749 None:intergenic 40.0%
! CTGTGTGTTTTGCAGGTTAA+TGG + chr7_2:55295728-55295747 Msa1063400:intron 40.0%
GCAGGTTAATGGTGTAAAAG+TGG + chr7_2:55295739-55295758 Msa1063400:intron 40.0%
GTTAATGGTGTAAAAGTGGC+AGG + chr7_2:55295743-55295762 Msa1063400:intron 40.0%
CGAACCTACAAAAGTCATCA+CGG - chr7_2:55295914-55295933 None:intergenic 40.0%
GATCTTAAAGACTGCTCTGA+TGG + chr7_2:55295941-55295960 Msa1063400:CDS 40.0%
TCTTCTGTCACCATTGTAGA+AGG + chr7_2:55296008-55296027 Msa1063400:intron 40.0%
CTTCACATATGGGGGAAAAA+AGG - chr7_2:55296149-55296168 None:intergenic 40.0%
! AAATGAGGTCCTTTTCCTTG+TGG - chr7_2:55296265-55296284 None:intergenic 40.0%
!! TCTGGAACCAAACTTGCTAT+TGG + chr7_2:55296340-55296359 Msa1063400:CDS 40.0%
!!! TGGATTTTTAAGTGGTCGTG+TGG + chr7_2:55296360-55296379 Msa1063400:intron 40.0%
!!! GGATTTTTAAGTGGTCGTGT+GGG + chr7_2:55296361-55296380 Msa1063400:intron 40.0%
TGAGGGTGATACTGGTAAAA+CGG + chr7_2:55296702-55296721 Msa1063400:CDS 40.0%
CTTTAAATGTAATGGCCGGT+TGG - chr7_2:55296731-55296750 None:intergenic 40.0%
CAACCGGCCATTACATTTAA+AGG + chr7_2:55296729-55296748 Msa1063400:intron 40.0%
! GCACTGACACTACAGATTAA+AGG + chr7_2:55296864-55296883 Msa1063400:intron 40.0%
!! TGAGGCATTGACACAAACAT+TGG - chr7_2:55296997-55297016 None:intergenic 40.0%
AGATGATAGCATCACAACCT+CGG + chr7_2:55297043-55297062 Msa1063400:intron 40.0%
! CTTGTCATTTGATACTTCCG+AGG - chr7_2:55297063-55297082 None:intergenic 40.0%
GTTTCAGCAGTACTCTTCAA+GGG - chr7_2:55297098-55297117 None:intergenic 40.0%
AGTTTCAGCAGTACTCTTCA+AGG - chr7_2:55297099-55297118 None:intergenic 40.0%
!! GTCCACAAAAGCATTGATAC+AGG + chr7_2:55297265-55297284 Msa1063400:CDS 40.0%
! GACCTGTATCAATGCTTTTG+TGG - chr7_2:55297270-55297289 None:intergenic 40.0%
! TTTACCAGATTTGGAACTGG+TGG + chr7_2:55297764-55297783 Msa1063400:CDS 40.0%
ACCATGTGTTCCGATGATTA+TGG + chr7_2:55297843-55297862 Msa1063400:CDS 40.0%
TCCATAATCATCGGAACACA+TGG - chr7_2:55297847-55297866 None:intergenic 40.0%
TGATTATGGACAGATTGTGC+TGG + chr7_2:55297857-55297876 Msa1063400:CDS 40.0%
ATTCTAGGCGGTATTGTCAA+AGG + chr7_2:55298307-55298326 Msa1063400:CDS 40.0%
TTCTAGGCGGTATTGTCAAA+GGG + chr7_2:55298308-55298327 Msa1063400:CDS 40.0%
GGTATTGTCAAAGGGTTGAA+AGG + chr7_2:55298316-55298335 Msa1063400:CDS 40.0%
ATTGTCAAAGGGTTGAAAGG+AGG + chr7_2:55298319-55298338 Msa1063400:CDS 40.0%
! TTTTGTCAGTTCTGCATGAG+AGG - chr7_2:55298350-55298369 None:intergenic 40.0%
AAATGACCGAAATTGGAGGT+TGG - chr7_2:55298376-55298395 None:intergenic 40.0%
AACCTCCAATTTCGGTCATT+TGG + chr7_2:55298375-55298394 Msa1063400:CDS 40.0%
TTCCAAATGACCGAAATTGG+AGG - chr7_2:55298380-55298399 None:intergenic 40.0%
GGAAGTGAATCTGACAAAGA+GGG - chr7_2:55298418-55298437 None:intergenic 40.0%
TGGAAGTGAATCTGACAAAG+AGG - chr7_2:55298419-55298438 None:intergenic 40.0%
! AAGCTCCACTTCCTTTTCAT+CGG - chr7_2:55298458-55298477 None:intergenic 40.0%
AAGGAAGTGGAGCTTGATAT+AGG + chr7_2:55298463-55298482 Msa1063400:CDS 40.0%
GAAGTAGAAGCTGTAGTTTG+AGG - chr7_2:55298623-55298642 None:intergenic 40.0%
GTGACTTATCTGCAAGCAAA+AGG - chr7_2:55298733-55298752 None:intergenic 40.0%
AGGGAGAAATTGTTTCAAGG+CGG + chr7_2:55298761-55298780 Msa1063400:CDS 40.0%
ATGGCTGCTTACAGAAAAAC+TGG + chr7_2:55298830-55298849 Msa1063400:CDS 40.0%
TGGCTGCTTACAGAAAAACT+GGG + chr7_2:55298831-55298850 Msa1063400:CDS 40.0%
! GTTTCTTGTTTGAGAGGCAA+CGG - chr7_2:55298958-55298977 None:intergenic 40.0%
CAAGAAACAAGCTTATGGAG+AGG + chr7_2:55298970-55298989 Msa1063400:CDS 40.0%
TATGGAGAGGCAGGAAAAAT+TGG + chr7_2:55298983-55299002 Msa1063400:CDS 40.0%
! CAATTGGTGCTTTCATTGAG+AGG + chr7_2:55299417-55299436 Msa1063400:intron 40.0%
AGACTGGTGGAAGAACTTAT+TGG - chr7_2:55299897-55299916 None:intergenic 40.0%
ATAAGTTCTTCCACCAGTCT+TGG + chr7_2:55299897-55299916 Msa1063400:intron 40.0%
!! AAACGAGCTTGTTAAGACCA+TGG + chr7_2:55300120-55300139 Msa1063400:CDS 40.0%
!! AGCTTGTTAAGACCATGGAA+AGG + chr7_2:55300125-55300144 Msa1063400:CDS 40.0%
TTGTTAAGACCATGGAAAGG+AGG + chr7_2:55300128-55300147 Msa1063400:CDS 40.0%
AGACAATGCTACAAAAAGGG+AGG - chr7_2:55300293-55300312 None:intergenic 40.0%
GCGAGAACTGAAGAAGAAGA+TGG - chr7_2:55290925-55290944 None:intergenic 45.0%
! GGCAGACGGTTTTTAATGAC+AGG + chr7_2:55291400-55291419 Msa1063400:intron 45.0%
GCTTAGTTTAATGGCAGGGA+TGG + chr7_2:55291552-55291571 Msa1063400:intron 45.0%
GGAAGACTTAAGGTGATTGG+CGG + chr7_2:55291573-55291592 Msa1063400:CDS 45.0%
CTTGCAGTTCCTACAAAACC+AGG + chr7_2:55291815-55291834 Msa1063400:intron 45.0%
!!! ACCGCTTTTTCTGTCATCAG+CGG + chr7_2:55292146-55292165 Msa1063400:CDS 45.0%
AGTTATGTCGGTGATGAGCA+TGG + chr7_2:55292297-55292316 Msa1063400:intron 45.0%
ACCCGGCAGTTTCTATCAAA+AGG - chr7_2:55292745-55292764 None:intergenic 45.0%
TGCCTGTTCCCAGAAGAATA+AGG - chr7_2:55292812-55292831 None:intergenic 45.0%
TGAAATTGCCGAGCCAACTT+CGG + chr7_2:55293052-55293071 Msa1063400:intron 45.0%
CCATGACTTTCCCGCAATAA+AGG - chr7_2:55293177-55293196 None:intergenic 45.0%
CCTTTATTGCGGGAAAGTCA+TGG + chr7_2:55293174-55293193 Msa1063400:CDS 45.0%
GCTCGAGTCAGTATTACAGA+GGG - chr7_2:55293311-55293330 None:intergenic 45.0%
GACTCGAGCCTTCTGATATT+TGG + chr7_2:55293322-55293341 Msa1063400:intron 45.0%
CGCCCATTCCAAATATCAGA+AGG - chr7_2:55293333-55293352 None:intergenic 45.0%
AAAGAGGAACTCGGTCAGAA+CGG + chr7_2:55293475-55293494 Msa1063400:intron 45.0%
ACAACATGCCCATAGAACGT+CGG + chr7_2:55293508-55293527 Msa1063400:intron 45.0%
CTTTACTGCCGACGTTCTAT+GGG - chr7_2:55293519-55293538 None:intergenic 45.0%
GATCCGATGGTCCAAAAAGA+GGG + chr7_2:55293695-55293714 Msa1063400:intron 45.0%
! GGGGTAACTTTCCCTCTTTT+TGG - chr7_2:55293709-55293728 None:intergenic 45.0%
CTTTGTTGGGCATCTTCTGA+TGG + chr7_2:55294421-55294440 Msa1063400:CDS 45.0%
CTCGCTGTTGGATACTTAGA+TGG + chr7_2:55294451-55294470 Msa1063400:CDS 45.0%
CAGACGACAAGTTCCAAAAC+AGG - chr7_2:55294483-55294502 None:intergenic 45.0%
!! GTGGTTTGTTGGCCTTTAGA+AGG - chr7_2:55294511-55294530 None:intergenic 45.0%
CGGGATTCTTCTTTCTGCAT+TGG - chr7_2:55294566-55294585 None:intergenic 45.0%
TCCCGGTCATTGTCTTACAA+TGG + chr7_2:55294581-55294600 Msa1063400:CDS 45.0%
GGTCAGTTGTTTGTGTATGG+TGG + chr7_2:55294637-55294656 Msa1063400:CDS 45.0%
CGTGCAGACCTTACACTTAA+TGG + chr7_2:55294921-55294940 Msa1063400:CDS 45.0%
TACTGCCAAGTATAGGAGCA+AGG + chr7_2:55294964-55294983 Msa1063400:CDS 45.0%
ACTGCCAAGTATAGGAGCAA+GGG + chr7_2:55294965-55294984 Msa1063400:CDS 45.0%
AAACCCCTTGCTCCTATACT+TGG - chr7_2:55294972-55294991 None:intergenic 45.0%
CTGAAAACTAGCTCAACACC+TGG + chr7_2:55295312-55295331 Msa1063400:CDS 45.0%
TCAAATTGGCCCTTAACTGG+GGG + chr7_2:55295348-55295367 Msa1063400:CDS 45.0%
TTAACCATGGACAAGTGGCT+GGG - chr7_2:55295378-55295397 None:intergenic 45.0%
TTTAACCATGGACAAGTGGC+TGG - chr7_2:55295379-55295398 None:intergenic 45.0%
AGCCACTTGTCCATGGTTAA+AGG + chr7_2:55295378-55295397 Msa1063400:CDS 45.0%
CACCTTTAACCATGGACAAG+TGG - chr7_2:55295383-55295402 None:intergenic 45.0%
! TTGTCCATGGTTAAAGGTGC+TGG + chr7_2:55295384-55295403 Msa1063400:intron 45.0%
GATGTGTGGCATCACACAAA+AGG - chr7_2:55295452-55295471 None:intergenic 45.0%
TTGTTCTGCTTCCTTGCTTC+TGG + chr7_2:55295796-55295815 Msa1063400:CDS 45.0%
TACAAAAGTCATCACGGCCA+AGG - chr7_2:55295908-55295927 None:intergenic 45.0%
! TTGGCCGTGATGACTTTTGT+AGG + chr7_2:55295907-55295926 Msa1063400:intron 45.0%
AACGCATGCTTCACATATGG+GGG - chr7_2:55296157-55296176 None:intergenic 45.0%
CAACGCATGCTTCACATATG+GGG - chr7_2:55296158-55296177 None:intergenic 45.0%
GCAACGCATGCTTCACATAT+GGG - chr7_2:55296159-55296178 None:intergenic 45.0%
TGCAACGCATGCTTCACATA+TGG - chr7_2:55296160-55296179 None:intergenic 45.0%
GTAATTGGTGAGCTTGAGCT+AGG - chr7_2:55296550-55296569 None:intergenic 45.0%
!! GAAGGTGTTTCTGGTTTCCT+TGG - chr7_2:55296622-55296641 None:intergenic 45.0%
AGGAAACCAGAAACACCTTC+AGG + chr7_2:55296622-55296641 Msa1063400:CDS 45.0%
!! GAGTTTCCTGAAGGTGTTTC+TGG - chr7_2:55296631-55296650 None:intergenic 45.0%
ACCTTCAGGAAACTCTCATG+AGG + chr7_2:55296636-55296655 Msa1063400:CDS 45.0%
TCCTCATGAGAGTTTCCTGA+AGG - chr7_2:55296640-55296659 None:intergenic 45.0%
AGTGTAGTTGAGGGTGATAC+TGG + chr7_2:55296694-55296713 Msa1063400:CDS 45.0%
!! GGATTCAGTTTTATCGCACC+TGG + chr7_2:55296813-55296832 Msa1063400:intron 45.0%
TATCGCACCTGGCATATCAT+TGG + chr7_2:55296824-55296843 Msa1063400:intron 45.0%
TGACATTGACACATCGACAC+TGG - chr7_2:55296965-55296984 None:intergenic 45.0%
!! AGTGTCGATGTGTCAATGTC+AGG + chr7_2:55296964-55296983 Msa1063400:intron 45.0%
! GTGTCGATGTGTCAATGTCA+GGG + chr7_2:55296965-55296984 Msa1063400:intron 45.0%
GAGGTTGTGATGCTATCATC+TGG - chr7_2:55297044-55297063 None:intergenic 45.0%
ATCAAATGACAAGCAGCACG+AGG + chr7_2:55297070-55297089 Msa1063400:intron 45.0%
TTTCTTGCACAGGCTCTTCA+GGG - chr7_2:55297124-55297143 None:intergenic 45.0%
TCTTCAGAAACCACACACTC+TGG + chr7_2:55297185-55297204 Msa1063400:CDS 45.0%
CTTCAGAAACCACACACTCT+GGG + chr7_2:55297186-55297205 Msa1063400:CDS 45.0%
TTCAGAAACCACACACTCTG+GGG + chr7_2:55297187-55297206 Msa1063400:CDS 45.0%
! ACACTCTGGGGATATCCATT+TGG + chr7_2:55297199-55297218 Msa1063400:CDS 45.0%
CCAATTCAGAACCATTAGCC+TGG - chr7_2:55297957-55297976 None:intergenic 45.0%
!! CCAGGCTAATGGTTCTGAAT+TGG + chr7_2:55297954-55297973 Msa1063400:intron 45.0%
AGAACGTTGTCGTGAAGACA+AGG - chr7_2:55298130-55298149 None:intergenic 45.0%
GTCAGATTCACTTCCAACAG+TGG + chr7_2:55298423-55298442 Msa1063400:CDS 45.0%
ACTTCCAACAGTGGTAGTAG+TGG + chr7_2:55298432-55298451 Msa1063400:CDS 45.0%
GGCTGCTTACAGAAAAACTG+GGG + chr7_2:55298832-55298851 Msa1063400:CDS 45.0%
AAACAAGCTTATGGAGAGGC+AGG + chr7_2:55298974-55298993 Msa1063400:CDS 45.0%
!! ATGATGCACTAAGGAGTGTC+TGG + chr7_2:55299125-55299144 Msa1063400:intron 45.0%
CAAACAATAGCCAAGACTGG+TGG - chr7_2:55299910-55299929 None:intergenic 45.0%
AGACCATGGAAAGGAGGAAA+TGG + chr7_2:55300134-55300153 Msa1063400:CDS 45.0%
CAGCACAAGTTTCAGCAGCA+AGG + chr7_2:55290847-55290866 Msa1063400:intron 50.0%
TGGCAGGGATGGAAGACTTA+AGG + chr7_2:55291563-55291582 Msa1063400:intron 50.0%
GCCGCTGATGACAGAAAAAG+CGG - chr7_2:55292150-55292169 None:intergenic 50.0%
GATAGAAACTGCCGGGTTTC+CGG + chr7_2:55292748-55292767 Msa1063400:intron 50.0%
TCCAGCGACCAACCAATTGT+TGG + chr7_2:55292773-55292792 Msa1063400:CDS 50.0%
! TCCAACAATTGGTTGGTCGC+TGG - chr7_2:55292777-55292796 None:intergenic 50.0%
GTTGAGTTCCGAAGTTGGCT+CGG - chr7_2:55293063-55293082 None:intergenic 50.0%
CACTCGTTGAGTTCCGAAGT+TGG - chr7_2:55293068-55293087 None:intergenic 50.0%
ATCGCCTCCTGCCTTTATTG+CGG + chr7_2:55293163-55293182 Msa1063400:CDS 50.0%
TTTCCCGCAATAAAGGCAGG+AGG - chr7_2:55293170-55293189 None:intergenic 50.0%
GACTTTCCCGCAATAAAGGC+AGG - chr7_2:55293173-55293192 None:intergenic 50.0%
ATTGCGGGAAAGTCATGGTG+CGG + chr7_2:55293179-55293198 Msa1063400:CDS 50.0%
GGCTCGAGTCAGTATTACAG+AGG - chr7_2:55293312-55293331 None:intergenic 50.0%
GCTTTACTGCCGACGTTCTA+TGG - chr7_2:55293520-55293539 None:intergenic 50.0%
AGAACGTCGGCAGTAAAGCA+CGG + chr7_2:55293521-55293540 Msa1063400:intron 50.0%
CGATCCGATGGTCCAAAAAG+AGG + chr7_2:55293694-55293713 Msa1063400:intron 50.0%
!! TGTGTTCCTTGGTGGTGGAA+AGG + chr7_2:55294297-55294316 Msa1063400:CDS 50.0%
TCGTCTGCAGCACCTTCTAA+AGG + chr7_2:55294496-55294515 Msa1063400:CDS 50.0%
TCTTGAATGGTCATCGGGGA+TGG + chr7_2:55294878-55294897 Msa1063400:CDS 50.0%
CTGCCAAGTATAGGAGCAAG+GGG + chr7_2:55294966-55294985 Msa1063400:CDS 50.0%
AAACTCCTGCGCAGATACAG+AGG - chr7_2:55295096-55295115 None:intergenic 50.0%
TTCAGAACTGCGGCTACCTA+AGG - chr7_2:55295297-55295316 None:intergenic 50.0%
!! CTTTTCCTTGTGGAGCGTCA+TGG - chr7_2:55296255-55296274 None:intergenic 50.0%
CATGACGCTCCACAAGGAAA+AGG + chr7_2:55296253-55296272 Msa1063400:CDS 50.0%
TCATATCGCAGACTCCAACC+TGG - chr7_2:55296492-55296511 None:intergenic 50.0%
CTGGTAAAACGGTCTCCAAC+CGG + chr7_2:55296713-55296732 Msa1063400:intron 50.0%
CTTTCTTGCACAGGCTCTTC+AGG - chr7_2:55297125-55297144 None:intergenic 50.0%
! GTTGAGCTGCTTTCTTGCAC+AGG - chr7_2:55297134-55297153 None:intergenic 50.0%
GCAAGAAAGCAGCTCAACTG+TGG + chr7_2:55297136-55297155 Msa1063400:CDS 50.0%
ATGGATATCCCCAGAGTGTG+TGG - chr7_2:55297198-55297217 None:intergenic 50.0%
GCAGGACAAGTGGATCCAAA+TGG - chr7_2:55297217-55297236 None:intergenic 50.0%
TCACAGCAAAGCAGGACAAG+TGG - chr7_2:55297227-55297246 None:intergenic 50.0%
! ACCAGATTTGGAACTGGTGG+CGG + chr7_2:55297767-55297786 Msa1063400:CDS 50.0%
TGAAAATGCGGCATCAGCAG+CGG - chr7_2:55298158-55298177 None:intergenic 50.0%
ACAATACCGCCTAGAATCGC+TGG - chr7_2:55298304-55298323 None:intergenic 50.0%
GGTAGTAGTGGCCGATGAAA+AGG + chr7_2:55298444-55298463 Msa1063400:CDS 50.0%
AGTGGCCGATGAAAAGGAAG+TGG + chr7_2:55298450-55298469 Msa1063400:CDS 50.0%
TCTTCAGGTGTTCTGACCCT+TGG - chr7_2:55298806-55298825 None:intergenic 50.0%
GGAGAGGCAGGAAAAATTGG+AGG + chr7_2:55298986-55299005 Msa1063400:CDS 50.0%
TCAGAGAATAAGCCAGCGCA+CGG + chr7_2:55300057-55300076 Msa1063400:intron 50.0%
CCACCATTTCCTCCTTTCCA+TGG - chr7_2:55300140-55300159 None:intergenic 50.0%
CCATGGAAAGGAGGAAATGG+TGG + chr7_2:55300137-55300156 Msa1063400:CDS 50.0%
TAAGGCGCGTGCGTTCTGTT+AGG + chr7_2:55291342-55291361 Msa1063400:intron 55.0%
! ATTGGTTGGTCGCTGGACTC+CGG - chr7_2:55292770-55292789 None:intergenic 55.0%
TCGCCTCCTGCCTTTATTGC+GGG + chr7_2:55293164-55293183 Msa1063400:CDS 55.0%
GGAGATCCTTTCCACCACCA+AGG - chr7_2:55294306-55294325 None:intergenic 55.0%
GATGGCTCCATTCTCGCTGT+TGG + chr7_2:55294439-55294458 Msa1063400:CDS 55.0%
GACATCCTCTGTATCTGCGC+AGG + chr7_2:55295088-55295107 Msa1063400:CDS 55.0%
CTGGGAACACCCCCAGTTAA+GGG - chr7_2:55295360-55295379 None:intergenic 55.0%
TGTTCCCAGCCACTTGTCCA+TGG + chr7_2:55295371-55295390 Msa1063400:CDS 55.0%
! TGCTTCCTTGCTTCTGGCTG+TGG + chr7_2:55295802-55295821 Msa1063400:CDS 55.0%
! GCTTCCTTGCTTCTGGCTGT+GGG + chr7_2:55295803-55295822 Msa1063400:CDS 55.0%
ATTGCCCACAGCCAGAAGCA+AGG - chr7_2:55295810-55295829 None:intergenic 55.0%
CTGGCTGTGGGCAATGAATG+TGG + chr7_2:55295815-55295834 Msa1063400:CDS 55.0%
TCCGCCACCAGTTCCAAATC+TGG - chr7_2:55297771-55297790 None:intergenic 55.0%
ACGACTGTGCCAGCGATTCT+AGG + chr7_2:55298292-55298311 Msa1063400:CDS 55.0%
ACTGTGCCAGCGATTCTAGG+CGG + chr7_2:55298295-55298314 Msa1063400:CDS 55.0%
TCGGCCACTACTACCACTGT+TGG - chr7_2:55298439-55298458 None:intergenic 55.0%
GAGGAACTCGGTCAGAACGG+CGG + chr7_2:55293478-55293497 Msa1063400:intron 60.0%
GCTGGGAACACCCCCAGTTA+AGG - chr7_2:55295361-55295380 None:intergenic 60.0%
GCAGTCCATGACGCTCCACA+AGG + chr7_2:55296247-55296266 Msa1063400:intron 60.0%
CGCACGGCAGACCTGCAAAA+TGG + chr7_2:55300073-55300092 Msa1063400:CDS 60.0%
GTCGCTGGACTCCGGAAACC+CGG - chr7_2:55292762-55292781 None:intergenic 65.0%
GAACTCGGTCAGAACGGCGG+TGG + chr7_2:55293481-55293500 Msa1063400:intron 65.0%
TTTGCAGGTCTGCCGTGCGC+TGG - chr7_2:55300072-55300091 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 55290574 55300422 55290574 ID=Msa1063400;Name=Msa1063400
chr7_2 mRNA 55290574 55300422 55290574 ID=Msa1063400-mRNA-1;Parent=Msa1063400;Name=Msa1063400-mRNA-1;_AED=0.10;_eAED=0.10;_QI=146|0.83|0.76|0.96|0.95|0.96|25|254|1057
chr7_2 exon 55290574 55290767 55290574 ID=Msa1063400-mRNA-1:exon:10292;Parent=Msa1063400-mRNA-1
chr7_2 exon 55290850 55290983 55290850 ID=Msa1063400-mRNA-1:exon:10293;Parent=Msa1063400-mRNA-1
chr7_2 exon 55291569 55291653 55291569 ID=Msa1063400-mRNA-1:exon:10294;Parent=Msa1063400-mRNA-1
chr7_2 exon 55291822 55291875 55291822 ID=Msa1063400-mRNA-1:exon:10295;Parent=Msa1063400-mRNA-1
chr7_2 exon 55292089 55292180 55292089 ID=Msa1063400-mRNA-1:exon:10296;Parent=Msa1063400-mRNA-1
chr7_2 exon 55292299 55292402 55292299 ID=Msa1063400-mRNA-1:exon:10297;Parent=Msa1063400-mRNA-1
chr7_2 exon 55292753 55292839 55292753 ID=Msa1063400-mRNA-1:exon:10298;Parent=Msa1063400-mRNA-1
chr7_2 exon 55293155 55293200 55293155 ID=Msa1063400-mRNA-1:exon:10299;Parent=Msa1063400-mRNA-1
chr7_2 exon 55294237 55294690 55294237 ID=Msa1063400-mRNA-1:exon:10300;Parent=Msa1063400-mRNA-1
chr7_2 exon 55294870 55295208 55294870 ID=Msa1063400-mRNA-1:exon:10301;Parent=Msa1063400-mRNA-1
chr7_2 exon 55295300 55295399 55295300 ID=Msa1063400-mRNA-1:exon:10302;Parent=Msa1063400-mRNA-1
chr7_2 exon 55295765 55295841 55295765 ID=Msa1063400-mRNA-1:exon:10303;Parent=Msa1063400-mRNA-1
chr7_2 exon 55295929 55296001 55295929 ID=Msa1063400-mRNA-1:exon:10304;Parent=Msa1063400-mRNA-1
chr7_2 exon 55296251 55296378 55296251 ID=Msa1063400-mRNA-1:exon:10305;Parent=Msa1063400-mRNA-1
chr7_2 exon 55296493 55296723 55296493 ID=Msa1063400-mRNA-1:exon:10306;Parent=Msa1063400-mRNA-1
chr7_2 exon 55297104 55297286 55297104 ID=Msa1063400-mRNA-1:exon:10307;Parent=Msa1063400-mRNA-1
chr7_2 exon 55297371 55297495 55297371 ID=Msa1063400-mRNA-1:exon:10308;Parent=Msa1063400-mRNA-1
chr7_2 exon 55297761 55297878 55297761 ID=Msa1063400-mRNA-1:exon:10309;Parent=Msa1063400-mRNA-1
chr7_2 exon 55297958 55298013 55297958 ID=Msa1063400-mRNA-1:exon:10310;Parent=Msa1063400-mRNA-1
chr7_2 exon 55298111 55298204 55298111 ID=Msa1063400-mRNA-1:exon:10311;Parent=Msa1063400-mRNA-1
chr7_2 exon 55298292 55298484 55298292 ID=Msa1063400-mRNA-1:exon:10312;Parent=Msa1063400-mRNA-1
chr7_2 exon 55298600 55298671 55298600 ID=Msa1063400-mRNA-1:exon:10313;Parent=Msa1063400-mRNA-1
chr7_2 exon 55298744 55298853 55298744 ID=Msa1063400-mRNA-1:exon:10314;Parent=Msa1063400-mRNA-1
chr7_2 exon 55298945 55299007 55298945 ID=Msa1063400-mRNA-1:exon:10315;Parent=Msa1063400-mRNA-1
chr7_2 exon 55300061 55300422 55300061 ID=Msa1063400-mRNA-1:exon:10316;Parent=Msa1063400-mRNA-1
chr7_2 five_prime_UTR 55290574 55290719 55290574 ID=Msa1063400-mRNA-1:five_prime_utr;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55290720 55290767 55290720 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55290850 55290983 55290850 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55291569 55291653 55291569 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55291822 55291875 55291822 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55292089 55292180 55292089 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55292299 55292402 55292299 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55292753 55292839 55292753 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55293155 55293200 55293155 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55294237 55294690 55294237 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55294870 55295208 55294870 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55295300 55295399 55295300 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55295765 55295841 55295765 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55295929 55296001 55295929 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55296251 55296378 55296251 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55296493 55296723 55296493 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55297104 55297286 55297104 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55297371 55297495 55297371 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55297761 55297878 55297761 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55297958 55298013 55297958 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55298111 55298204 55298111 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55298292 55298484 55298292 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55298600 55298671 55298600 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55298744 55298853 55298744 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55298945 55299007 55298945 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 CDS 55300061 55300168 55300061 ID=Msa1063400-mRNA-1:cds;Parent=Msa1063400-mRNA-1
chr7_2 three_prime_UTR 55300169 55300422 55300169 ID=Msa1063400-mRNA-1:three_prime_utr;Parent=Msa1063400-mRNA-1
Gene Sequence

>Msa1063400

ATGTTTGCGAAAAGATTGTTACACAAAGCTGTGCAACACCATCACAACCACAAGTTTCAGCAGCAAGGTAGTTTACAATCAACTGAATTGGATCCAAGAATTGTGATTCACTATGGCATTCCATCTTCTTCTTCAGTTCTCGCTTTTGATTCAATTCAACGACTTTTAGCTATTGGAACTTTGGATGGAAGACTTAAGGTGATTGGCGGTGATAACATTGAAGGACTTTTGATTTCTTCGAAACAACTTCCTTACAAATACTTGGAGTTCCTACAAAACCAGGGATATTTAGTTGGAGTCTTAAATGATAATGATATCCAGGTTTGGAATCTTGAAAGTCGTAGCCTTATTTGTTCTTTACAATGGGAATCCAATATTACCGCTTTTTCTGTCATCAGCGGCTCACATTTCATTTATGTCGGTGATGAGCATGGCCTGTTTTCTGTGATAAAGTTTGATGCCGAGGAAGGACAACTTTTGAAGTCATCAAATCATTTGTCAGCTAAATTTCTAAGGGAAACTGCCGGGTTTCCGGAGTCCAGCGACCAACCAATTGTTGGAATTCTTTCACAACCTTATTCTTCTGGGAACAGGCAAGATATATGGGAACATATCGCCTCCTGCCTTTATTGCGGGAAAGTCATGGTGCGATTGTTGATTGCATTTCAGGATGGACTGCTAATTCTTTGGGATGTTTCTGAAGCTAAAATTGTGTTCCTTGGTGGTGGAAAGGATCTCCAATTGAAAGATGAAGATGAGAACTCTACTGAAACAAACGCCAATCTTCCGGCTGATATTTTAGAACAAAACCTGGGAGATAAAGAAATAAGTGCTCTTTGTTGGGCATCTTCTGATGGCTCCATTCTCGCTGTTGGATACTTAGATGGAGATATCCTGTTTTGGAACTTGTCGTCTGCAGCACCTTCTAAAGGCCAACAAACCACTTCATCTAAAAATGTTGTTAGGCTACAACTGTCCAATGCAGAAAGAAGAATCCCGGTCATTGTCTTACAATGGTCCAGTAGTCACAAATCTCATAATGATTGCACTGGTCAGTTGTTTGTGTATGGTGGTGATGAAATTGGATCGGAAGAAGTTTTGACTGTTTTAACTCTTGAATGGTCATCGGGGATGGAATCATTAAAATGCATTGGTCGTGCAGACCTTACACTTAATGGCACTTTCGCAGACTTGATTTTACTGCCAAGTATAGGAGCAAGGGGTTTAAATAGCAAAGATGATCTTTTTGTACTGACAAACCCTGGACAAATACACTATTATGATAATGATAGCTTGTCTGCATTAATGTCTGAGCAGAATAGGACATCCTCTGTATCTGCGCAGGAGTTTCCAGTGCTAATACCTATGAATAATCCATCTTTAACTGTAGCAAAACTTATCAAGTTGCCAAGTCAGTTAAATTCATCGAAAACTCTAGCTGAGGTAGCCGCAGTTCTGAAAACTAGCTCAACACCTGGTTCAGCTTCTTGTTCAAATTGGCCCTTAACTGGGGGTGTTCCCAGCCACTTGTCCATGGTTAAAGGTTCGAATGCTCCAGTGACAAAATTGGACTTTTGTTCTGCTTCCTTGCTTCTGGCTGTGGGCAATGAATGTGGTCTTGTTCGCGTGTATGATCTTAAAGACTGCTCTGATGGGAAAAAGTTCCAGTTTGTCACAGAAACAAAAAATGAAGTCCATGACGCTCCACAAGGAAAAGGACCTCATTTTAGTGCTGTTTTTTCTCTTCTCGATTCTCCAGTACAAGCATTATCTTTTGCAAACTCTGGAACCAAACTTGCTATTGGATTTTTAAGTGGTCGTGTTGGAGTCTGCGATATGAAATCATTGTCTGTTTTGTTCTTGATTGACGGTGTACCTAGCTCAAGCTCACCAATTACTTCATTGGTTTGGAGACAACAAGCATGTTTTCAAAGTGATGTAAATAGTCCAAGGAAACCAGAAACACCTTCAGGAAACTCTCATGAGGAGATACTATTTATCTTATCTAGGGATGGAAAAATTAGTGTAGTTGAGGGTGATACTGGTAAAACGAGTACTGCTGAAACTCACCCTGAAGAGCCTGTGCAAGAAAGCAGCTCAACTGTGGTAAATTCATCAGAGGCTGAACATTTCTCTTCAGAAACCACACACTCTGGGGATATCCATTTGGATCCACTTGTCCTGCTTTGCTGTGAAAATTCATTGCACTTGTTGTCCACAAAAGCATTGATACAGGGAAATAAGAAACCGATACGAAAAGTGGAACATTCAAAATCTTGCTATTGGACTACAATTTTGAAGAAAGATGACAAATTTTGTGGGATTCTATCATTGCTTCAGACTGGAACATTTGAAATAAGATCTTTACCAGATTTGGAACTGGTGGCGGAAAGCTCTTTATTGTCGATTTTAAGGTGGAATTATAAAGTGAACATGGATAAAACCATGTGTTCCGATGATTATGGACAGATTGTGCTGGCTAATGGTTCTGAATTGGCATTCATCTCATTATTAGCTGGAGAAAATGAATTCAGGAGTCTCGAGCGTTTACCTTGTCTTCACGACAACGTTCTTGCAGCCGCTGCTGATGCCGCATTTTCATTCTCTTCAAATCAGAAGAAAAAACAGACGACTGTGCCAGCGATTCTAGGCGGTATTGTCAAAGGGTTGAAAGGAGGAAAAACCTCTCATGCAGAACTGACAAAAATTCCAACCTCCAATTTCGGTCATTTGGAACATATTTTTTTCAAGCCCTCTTTGTCAGATTCACTTCCAACAGTGGTAGTAGTGGCCGATGAAAAGGAAGTGGAGCTTGATATAGATGACATTCAAATAGACGAGCCTCAAACTACAGCTTCTACTTCATCTCCTGATGTTAAAAACAAACAGAAAGATAAGTCACAAAGTGATAGGGAGAAATTGTTTCAAGGCGGAACTAATGATGATGTAAAGCCAAGGGTCAGAACACCTGAAGAAATTATGGCTGCTTACAGAAAAACTGGGGATGCTGCTTCCGTTGCCTCTCAAACAAGAAACAAGCTTATGGAGAGGCAGGAAAAATTGGAGAGAATAAGCCAGCGCACGGCAGACCTGCAAAATGGAGCTGAAAATTTTGCATCATTAGCAAACGAGCTTGTTAAGACCATGGAAAGGAGGAAATGGTGGCAAATATAG
Protein sequence

>Msa1063400

MFAKRLLHKAVQHHHNHKFQQQGSLQSTELDPRIVIHYGIPSSSSVLAFDSIQRLLAIGTLDGRLKVIGGDNIEGLLISSKQLPYKYLEFLQNQGYLVGVLNDNDIQVWNLESRSLICSLQWESNITAFSVISGSHFIYVGDEHGLFSVIKFDAEEGQLLKSSNHLSAKFLRETAGFPESSDQPIVGILSQPYSSGNRQDIWEHIASCLYCGKVMVRLLIAFQDGLLILWDVSEAKIVFLGGGKDLQLKDEDENSTETNANLPADILEQNLGDKEISALCWASSDGSILAVGYLDGDILFWNLSSAAPSKGQQTTSSKNVVRLQLSNAERRIPVIVLQWSSSHKSHNDCTGQLFVYGGDEIGSEEVLTVLTLEWSSGMESLKCIGRADLTLNGTFADLILLPSIGARGLNSKDDLFVLTNPGQIHYYDNDSLSALMSEQNRTSSVSAQEFPVLIPMNNPSLTVAKLIKLPSQLNSSKTLAEVAAVLKTSSTPGSASCSNWPLTGGVPSHLSMVKGSNAPVTKLDFCSASLLLAVGNECGLVRVYDLKDCSDGKKFQFVTETKNEVHDAPQGKGPHFSAVFSLLDSPVQALSFANSGTKLAIGFLSGRVGVCDMKSLSVLFLIDGVPSSSSPITSLVWRQQACFQSDVNSPRKPETPSGNSHEEILFILSRDGKISVVEGDTGKTSTAETHPEEPVQESSSTVVNSSEAEHFSSETTHSGDIHLDPLVLLCCENSLHLLSTKALIQGNKKPIRKVEHSKSCYWTTILKKDDKFCGILSLLQTGTFEIRSLPDLELVAESSLLSILRWNYKVNMDKTMCSDDYGQIVLANGSELAFISLLAGENEFRSLERLPCLHDNVLAAAADAAFSFSSNQKKKQTTVPAILGGIVKGLKGGKTSHAELTKIPTSNFGHLEHIFFKPSLSDSLPTVVVVADEKEVELDIDDIQIDEPQTTASTSSPDVKNKQKDKSQSDREKLFQGGTNDDVKPRVRTPEEIMAAYRKTGDAASVASQTRNKLMERQEKLERISQRTADLQNGAENFASLANELVKTMERRKWWQI*