AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0797250


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0797250 MtrunA17_Chr5g0400501 92.683 410 0 1 122 501 29 438 0.0 768
Msa0797250 MtrunA17_Chr5g0413081 38.000 450 224 8 82 500 1 426 6.48e-104 317
Msa0797250 MtrunA17_Chr8g0368141 42.051 390 181 6 142 500 51 426 1.02e-103 317
Msa0797250 MtrunA17_Chr3g0141861 31.111 405 223 8 142 501 49 442 7.18e-66 219
Msa0797250 MtrunA17_Chr5g0427331 32.282 412 218 9 142 501 49 451 1.10e-62 211
Msa0797250 MtrunA17_Chr7g0271601 27.747 364 197 10 174 500 76 410 9.34e-38 143
Msa0797250 MtrunA17_Chr5g0400701 40.678 177 96 4 56 224 686 861 6.62e-24 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0797250 AT5G46630.1 87.561 410 21 1 122 501 29 438 0.0 734
Msa0797250 AT5G46630.2 86.753 385 21 1 122 476 29 413 0.0 679
Msa0797250 AT1G60780.1 40.769 390 186 6 142 500 51 426 1.05e-100 309
Msa0797250 AT1G10730.1 37.168 452 225 9 82 500 1 426 3.03e-99 306
Msa0797250 AT4G24550.2 31.991 422 220 9 136 501 41 451 1.85e-69 229
Msa0797250 AT4G24550.3 33.138 341 192 7 136 451 41 370 2.43e-58 198
Msa0797250 AT4G24550.1 33.133 332 189 6 142 451 50 370 4.06e-58 197
Msa0797250 AT1G56590.1 28.371 356 205 7 174 500 80 414 1.35e-35 137

Find 144 sgRNAs with CRISPR-Local

Find 677 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCACTATTCAAATCATATTT+TGG 0.157391 5_3:+9333825 Msa0797250:CDS
TTCCAAAGCCATCTTGTTAA+TGG 0.192502 5_3:+9340553 Msa0797250:three_prime_UTR
GTCAAACTTCAGGGATTAAT+TGG 0.211349 5_3:+9340392 Msa0797250:three_prime_UTR
TTAACAAATGAGAATTTATT+AGG 0.226484 5_3:+9333090 Msa0797250:CDS
AACCTCTCCGTCGGTGAAAT+TGG 0.239970 5_3:+9332159 Msa0797250:five_prime_UTR
ACCGATTCAGATGGAGTTTC+AGG 0.260698 5_3:+9339694 Msa0797250:CDS
ATGCAATCTCAAATAATTAA+AGG 0.264114 5_3:+9340424 Msa0797250:three_prime_UTR
CTTATGAAGTGCTTTCTATC+TGG 0.279752 5_3:+9336610 Msa0797250:CDS
GTAACTTGCAACGTCGCATT+TGG 0.288584 5_3:-9336302 None:intergenic
GGTTGCTGTTGTCAAACTTC+AGG 0.288819 5_3:+9340382 Msa0797250:three_prime_UTR
TATAATATTATTGCCTCTTC+GGG 0.290438 5_3:+9332564 Msa0797250:CDS
TTAAATCACGCCCTACTAAA+AGG 0.294099 5_3:+9336692 Msa0797250:CDS
TCTAGGTATCCCTTTGTTGC+AGG 0.297343 5_3:+9340457 Msa0797250:three_prime_UTR
AAACCAACCTTGGATGAAAA+AGG 0.306447 5_3:-9335901 None:intergenic
TGTTCGACCAAGTTCCTTGA+TGG 0.315007 5_3:-9339073 None:intergenic
CAGCTATTGATTGTTTAGTT+TGG 0.318085 5_3:+9339328 Msa0797250:CDS
TTATAAAGTGAAGGTGAAAA+TGG 0.318772 5_3:+9333131 Msa0797250:CDS
TTTCAGGTAAAGAGTGTCTT+TGG 0.322597 5_3:+9339204 Msa0797250:intron
TCGTCAAATTTACACATTGA+TGG 0.324003 5_3:-9336992 None:intergenic
TTATAATATTATTGCCTCTT+CGG 0.330534 5_3:+9332563 Msa0797250:CDS
GTCTCTATCGCGACGATGTC+GGG 0.365747 5_3:+9332265 Msa0797250:CDS
AAATGCGACGTTGCAAGTTA+CGG 0.367377 5_3:+9336304 Msa0797250:CDS
TTCCATTAACAAGATGGCTT+TGG 0.371916 5_3:-9340555 None:intergenic
GTTCCCATGTTCACAGCATC+TGG 0.373702 5_3:+9340161 Msa0797250:CDS
TCAAACACAGATTCTGTATC+AGG 0.387008 5_3:-9333204 None:intergenic
ATCAGTTCAAATTCACCATC+TGG 0.398480 5_3:-9337050 None:intergenic
CTCATTTACGAGCTTCTAGA+TGG 0.399037 5_3:+9333888 Msa0797250:CDS
GTTGCTGTTGTCAAACTTCA+GGG 0.401444 5_3:+9340383 Msa0797250:three_prime_UTR
TTCAAACCCAACTTCAAATC+AGG 0.404289 5_3:-9336637 None:intergenic
TCTCAACAGAAAGATGATAA+AGG 0.417468 5_3:+9340765 Msa0797250:three_prime_UTR
AATGCGACGTTGCAAGTTAC+GGG 0.424532 5_3:+9336305 Msa0797250:CDS
GATGGTTGGCAATACTTTGA+AGG 0.426750 5_3:-9339055 None:intergenic
CAAATGAGAATTTATTAGGA+GGG 0.433360 5_3:+9333094 Msa0797250:CDS
AGGGAGGTGTATTGTCAAAC+TGG 0.436420 5_3:+9331973 Msa0797250:five_prime_UTR
TGCAACGTCGCATTTGGAAC+AGG 0.439125 5_3:-9336296 None:intergenic
GTTTCCGATTGATCTTCTTC+CGG 0.440572 5_3:+9332134 Msa0797250:five_prime_UTR
TTGGGTTTGAATGATAAGAT+TGG 0.441817 5_3:+9336649 Msa0797250:CDS
TTAAAGGTGCAGTTCAATCT+AGG 0.444714 5_3:+9340440 Msa0797250:three_prime_UTR
GGAATGCCTGATTTGAAGTT+GGG 0.447084 5_3:+9336631 Msa0797250:CDS
TTTGCAGAAATCATGGACTT+TGG 0.450042 5_3:+9335814 Msa0797250:intron
CATATTACCAGACAAATTCC+AGG 0.450388 5_3:-9332591 None:intergenic
TCACACTCTCCACAATATCT+AGG 0.454091 5_3:-9336457 None:intergenic
AAGCTTTATATTACTCAAGA+AGG 0.456687 5_3:+9335868 Msa0797250:CDS
CGCTTTCAAGTTCGTTGTAG+AGG 0.457965 5_3:+9333561 Msa0797250:CDS
AAGCAGGATCATACGAGATT+AGG 0.459777 5_3:+9340345 Msa0797250:CDS
GGGAAACCCTGGAATTTGTC+TGG 0.460207 5_3:+9332584 Msa0797250:CDS
TTTGCTGTTTGTTTCGGCAC+AGG 0.461516 5_3:-9339264 None:intergenic
CTGAAGGTGTGGGAAAAGAG+TGG 0.468687 5_3:+9340287 Msa0797250:intron
CGTCTCTATCGCGACGATGT+CGG 0.469885 5_3:+9332264 Msa0797250:CDS
ACCTGAAACTCCATCTGAAT+CGG 0.470886 5_3:-9339695 None:intergenic
ACATGTATTTGCAGAAATCA+TGG 0.472173 5_3:+9335807 Msa0797250:intron
TTTGACAATACACCTCCCTT+TGG 0.476254 5_3:-9331969 None:intergenic
AAATACAATACAATGTGTAC+AGG 0.480845 5_3:-9340603 None:intergenic
TATAAAGTGAAGGTGAAAAT+GGG 0.484340 5_3:+9333132 Msa0797250:CDS
TGGAATGCCTGATTTGAAGT+TGG 0.486730 5_3:+9336630 Msa0797250:CDS
ACGGATGGAAGTAAATGTTA+AGG 0.488849 5_3:+9339095 Msa0797250:CDS
CATCCACCAATCTGCTTCAC+AGG 0.489532 5_3:-9333466 None:intergenic
AATCTTCTTATGTCGTCAAA+AGG 0.490176 5_3:+9336479 Msa0797250:CDS
TGGGTACAACACTGTTGAAT+GGG 0.491741 5_3:+9340307 Msa0797250:CDS
GCTGTTGGTTGGCGGAGAGA+AGG 0.495289 5_3:+9336329 Msa0797250:CDS
TTATGTTTCCATTAACAAGA+TGG 0.497347 5_3:-9340561 None:intergenic
TCACCGACGGAGAGGTTCGC+CGG 0.498153 5_3:-9332153 None:intergenic
TTTATCATCTTTCTGTTGAG+AGG 0.501457 5_3:-9340763 None:intergenic
CGACCAAGTTCCTTGATGGT+TGG 0.502376 5_3:-9339069 None:intergenic
GTGGGTACAACACTGTTGAA+TGG 0.504729 5_3:+9340306 Msa0797250:CDS
ATATAAAGCTTTAAGATCTC+CGG 0.510605 5_3:-9335856 None:intergenic
TAAACCAGATGCTGTGAACA+TGG 0.514088 5_3:-9340165 None:intergenic
TTGCCAACCATCAAGGAACT+TGG 0.515329 5_3:+9339066 Msa0797250:CDS
ACCAATCTGCTTCACAGGAC+AGG 0.518339 5_3:-9333461 None:intergenic
GTTCTGCGCTGTGATGTAAC+GGG 0.519953 5_3:+9336580 Msa0797250:CDS
GTCAATCCGACGACTCATAA+CGG 0.521227 5_3:+9332002 Msa0797250:five_prime_UTR
CATAAGACGCACGTGCCAAA+GGG 0.522731 5_3:+9331954 Msa0797250:five_prime_UTR
TTACGGGTGCTGTTGGTTGG+CGG 0.523294 5_3:+9336321 Msa0797250:CDS
CAAAGTATTGCCAACCATCA+AGG 0.525550 5_3:+9339059 Msa0797250:CDS
GATTAGGTGCTAGACACATT+GGG 0.526367 5_3:+9340361 Msa0797250:exon
ATGGTATGAGATTGCTTCGA+TGG 0.526701 5_3:+9340733 Msa0797250:three_prime_UTR
TTCGCCGGAAGAAGATCAAT+CGG 0.527206 5_3:-9332138 None:intergenic
GTGCAAAGATGTTTGCACTA+GGG 0.528491 5_3:+9339226 Msa0797250:CDS
AAGTTACGGGTGCTGTTGGT+TGG 0.531316 5_3:+9336318 Msa0797250:CDS
AATGAGAATTTATTAGGAGG+GGG 0.531701 5_3:+9333096 Msa0797250:CDS
TGTTCTGCGCTGTGATGTAA+CGG 0.532251 5_3:+9336579 Msa0797250:CDS
AAATGAGAATTTATTAGGAG+GGG 0.532602 5_3:+9333095 Msa0797250:CDS
ATGGTTGGCAATACTTTGAA+GGG 0.536477 5_3:-9339054 None:intergenic
ACCTGTCCTGTGAAGCAGAT+TGG 0.537523 5_3:+9333460 Msa0797250:CDS
ACAAATGAGAATTTATTAGG+AGG 0.543265 5_3:+9333093 Msa0797250:CDS
GCATAAGACGCACGTGCCAA+AGG 0.543266 5_3:+9331953 Msa0797250:five_prime_UTR
ACAGGTGTTCCTAGATATTG+TGG 0.545898 5_3:+9336448 Msa0797250:intron
GGTGCAAAGATGTTTGCACT+AGG 0.547993 5_3:+9339225 Msa0797250:CDS
AGATTAGGTGCTAGACACAT+TGG 0.550284 5_3:+9340360 Msa0797250:exon
ACGAGTTTCACAGTCACATC+CGG 0.553418 5_3:+9339288 Msa0797250:CDS
ATTGCCTCTTCGGGAAACCC+TGG 0.553642 5_3:+9332573 Msa0797250:CDS
ATAATGCAAACGAAAGAACT+TGG 0.553697 5_3:+9333436 Msa0797250:CDS
TGCAAAGATGTTTGCACTAG+GGG 0.556537 5_3:+9339227 Msa0797250:CDS
CAACCGCGATTCAGAGAGTA+GGG 0.558643 5_3:+9333040 Msa0797250:CDS
AAACTTCAGGGATTAATTGG+TGG 0.561410 5_3:+9340395 Msa0797250:three_prime_UTR
ATCAGGTATCGTATCACTGA+GGG 0.564329 5_3:+9339021 Msa0797250:intron
TAAGTTGTGACTCTTTCTCA+AGG 0.567568 5_3:-9336672 None:intergenic
ATACACTGGATCGGAGATGC+CGG 0.569668 5_3:+9332188 Msa0797250:exon
TTATCCACAAAATCTTTCAC+CGG 0.572212 5_3:+9335837 Msa0797250:CDS
AGCGCAAGCTACATTAGCAT+TGG 0.574062 5_3:-9333542 None:intergenic
TAAACAGCGGAAGCAGCCAC+CGG 0.577176 5_3:-9332207 None:intergenic
GAAATTGGAAGTTGATACAC+TGG 0.577303 5_3:+9332174 Msa0797250:five_prime_UTR
CTTCCGGCGAACCTCTCCGT+CGG 0.579599 5_3:+9332150 Msa0797250:five_prime_UTR
TTGCAAGTTACGGGTGCTGT+TGG 0.580431 5_3:+9336314 Msa0797250:CDS
GTTGCTTTACAGGGGAAACA+TGG 0.582781 5_3:+9333393 Msa0797250:intron
GACTAGACCACCGATTCAGA+TGG 0.586855 5_3:+9339685 Msa0797250:intron
TTCGCTCCTCCACAGATCTA+CGG 0.587277 5_3:+9332101 Msa0797250:five_prime_UTR
GTGGTTTCGCCGTAGATCTG+TGG 0.589391 5_3:-9332110 None:intergenic
ACAACCGCGATTCAGAGAGT+AGG 0.590270 5_3:+9333039 Msa0797250:CDS
AATACAATACAATGTGTACA+GGG 0.590286 5_3:-9340602 None:intergenic
GTTCGCTACATCACAAAAGC+AGG 0.590440 5_3:+9340329 Msa0797250:CDS
TGTCCTGTGAAGCAGATTGG+TGG 0.590779 5_3:+9333463 Msa0797250:CDS
GGAACTTGGTCGAACACGGA+TGG 0.592221 5_3:+9339080 Msa0797250:CDS
TGAAGGTGTGGGAAAAGAGT+GGG 0.594343 5_3:+9340288 Msa0797250:intron
AATTCCAGGGTTTCCCGAAG+AGG 0.598262 5_3:-9332577 None:intergenic
GGAAGAAGATCAATCGGAAA+CGG 0.602286 5_3:-9332132 None:intergenic
TCAAGGAACTTGGTCGAACA+CGG 0.609772 5_3:+9339076 Msa0797250:CDS
TAAAGGTGAAACTATAGTAA+CGG 0.615100 5_3:+9340782 Msa0797250:three_prime_UTR
AAATTTGACGAGGTTCAACT+CGG 0.616156 5_3:+9337004 Msa0797250:CDS
TGAGAGTAGAAGAGAAGAAG+CGG 0.617378 5_3:-9332055 None:intergenic
TCAACTTCCAATTTCACCGA+CGG 0.619304 5_3:-9332166 None:intergenic
ATATTACCAGACAAATTCCA+GGG 0.622713 5_3:-9332590 None:intergenic
CAGACTCCGTTATGAGTCGT+CGG 0.623841 5_3:-9332008 None:intergenic
GAACGAAACGACGTCGTCGA+CGG 0.626943 5_3:-9332078 None:intergenic
TGAAACTCCATCTGAATCGG+TGG 0.627007 5_3:-9339692 None:intergenic
TTCCAATTTCACCGACGGAG+AGG 0.628391 5_3:-9332161 None:intergenic
GGGTCAGGGTTATAAAGTGA+AGG 0.628644 5_3:+9333122 Msa0797250:CDS
TGGAAGTTGATACACTGGAT+CGG 0.630964 5_3:+9332179 Msa0797250:five_prime_UTR
GTTTACTTCTTGAACCTCCG+TGG 0.631442 5_3:+9332225 Msa0797250:CDS
GTTTCGCCGTAGATCTGTGG+AGG 0.647008 5_3:-9332107 None:intergenic
GAAAATGGGTCACATAGTTG+CGG 0.648232 5_3:+9333146 Msa0797250:CDS
AAGACGCACGTGCCAAAGGG+AGG 0.649377 5_3:+9331957 Msa0797250:five_prime_UTR
ATCAATGTGTAAATTTGACG+AGG 0.649503 5_3:+9336994 Msa0797250:CDS
CACTGGATCGGAGATGCCGG+TGG 0.655709 5_3:+9332191 Msa0797250:exon
AAACCAGATGCTGTGAACAT+GGG 0.662215 5_3:-9340164 None:intergenic
GATTGATGAGAACGTCACCA+CGG 0.673884 5_3:-9332242 None:intergenic
AGAAGATCAATCGGAAACGG+TGG 0.676547 5_3:-9332129 None:intergenic
AGTTCAAATTCACCATCTGG+AGG 0.689739 5_3:-9337047 None:intergenic
TTCTGCGCTGTGATGTAACG+GGG 0.698309 5_3:+9336581 Msa0797250:CDS
GAACCCTACTCTCTGAATCG+CGG 0.703326 5_3:-9333043 None:intergenic
TATCAGGTATCGTATCACTG+AGG 0.719317 5_3:+9339020 Msa0797250:intron
ATACAATACAATGTGTACAG+GGG 0.728026 5_3:-9340601 None:intergenic
TGATGAGAACGTCACCACGG+AGG 0.731384 5_3:-9332239 None:intergenic
GAGGTTCAAGAAGTAAACAG+CGG 0.750495 5_3:-9332220 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATTTATAAAAGAAACT+AGG + chr5_3:9333254-9333273 Msa0797250:intron 10.0%
!! ATTCATTAAAAAAAAAAACT+TGG - chr5_3:9334067-9334086 None:intergenic 10.0%
!! TGAAGTAAAAAAAAAAAAAT+TGG - chr5_3:9334336-9334355 None:intergenic 10.0%
!!! TCTAATTATAAATTTTGTAA+AGG - chr5_3:9334554-9334573 None:intergenic 10.0%
!!! TTTATCTTTTTAACATATAA+CGG - chr5_3:9334695-9334714 None:intergenic 10.0%
!!! ATATTTTTTTATGTTGAAAT+TGG + chr5_3:9335290-9335309 Msa0797250:intron 10.0%
!!! TACAAACATTTTTTTTTAAA+AGG + chr5_3:9336000-9336019 Msa0797250:intron 10.0%
!!! ACAAACATTTTTTTTTAAAA+GGG + chr5_3:9336001-9336020 Msa0797250:intron 10.0%
!!! AACCATTATTATATTTTTTT+TGG + chr5_3:9338652-9338671 Msa0797250:intron 10.0%
!! ATCCAAAAAAAATATAATAA+TGG - chr5_3:9338657-9338676 None:intergenic 10.0%
!!! TTTTTCATTCATTATATTTT+GGG + chr5_3:9340502-9340521 Msa0797250:three_prime_UTR 10.0%
!!! AAAAATCAGTTTAATATTTT+TGG + chr5_3:9340529-9340548 Msa0797250:three_prime_UTR 10.0%
!! AAAAACTTTATAGTTAAAAC+CGG - chr5_3:9332820-9332839 None:intergenic 15.0%
!!! TAACTATAAAGTTTTTTTGT+CGG + chr5_3:9332824-9332843 Msa0797250:intron 15.0%
!!! AAATTCTCATTTGTTAAAAA+AGG - chr5_3:9333087-9333106 None:intergenic 15.0%
!! TTAACAAATGAGAATTTATT+AGG + chr5_3:9333090-9333109 Msa0797250:CDS 15.0%
!!! TTATAATATTAATGCCTTTT+CGG + chr5_3:9333290-9333309 Msa0797250:intron 15.0%
!! TTTATTTATGATGATACTAT+TGG + chr5_3:9333346-9333365 Msa0797250:intron 15.0%
!! TTATTTATGATGATACTATT+GGG + chr5_3:9333347-9333366 Msa0797250:intron 15.0%
!! TGTCTATATAACTAATAATA+AGG + chr5_3:9334150-9334169 Msa0797250:intron 15.0%
!! GTCTATATAACTAATAATAA+GGG + chr5_3:9334151-9334170 Msa0797250:intron 15.0%
!! AAAATTTAAAAAGCAGTTAA+CGG - chr5_3:9334646-9334665 None:intergenic 15.0%
!! CAACATAAAAAAATATTTCA+GGG - chr5_3:9335286-9335305 None:intergenic 15.0%
!! TCAACATAAAAAAATATTTC+AGG - chr5_3:9335287-9335306 None:intergenic 15.0%
!!! TTTTACTTGATAACTTTATA+AGG + chr5_3:9335648-9335667 Msa0797250:intron 15.0%
!! ATATTTATCATTTGAATCAT+TGG + chr5_3:9335762-9335781 Msa0797250:intron 15.0%
!! TATGTAAATACCTTAAAATA+AGG + chr5_3:9335933-9335952 Msa0797250:intron 15.0%
!!! CTTTTAAATAAAAATGTCAA+AGG - chr5_3:9336770-9336789 None:intergenic 15.0%
!! TGTTACCATATTAAATAATA+TGG + chr5_3:9336807-9336826 Msa0797250:intron 15.0%
!!! TTTTAATGAAAATCTTTGAA+TGG + chr5_3:9338353-9338372 Msa0797250:intron 15.0%
!! TTTAATGAAAATCTTTGAAT+GGG + chr5_3:9338354-9338373 Msa0797250:intron 15.0%
!! CATGTTAAAAAATAAACAAA+AGG - chr5_3:9339180-9339199 None:intergenic 15.0%
!!! TTTTTTAACATGTTTTTTTC+AGG + chr5_3:9339188-9339207 Msa0797250:intron 15.0%
!! TATATGAAAATAATTTAACC+AGG - chr5_3:9339511-9339530 None:intergenic 15.0%
!!! GTTTTTCATTCATTATATTT+TGG + chr5_3:9340501-9340520 Msa0797250:three_prime_UTR 15.0%
!! TTATAATATTATTGCCTCTT+CGG + chr5_3:9332563-9332582 Msa0797250:CDS 20.0%
!!! AACTATAAAGTTTTTTTGTC+GGG + chr5_3:9332825-9332844 Msa0797250:intron 20.0%
!! TAAAACAATTATAGCAACAA+CGG - chr5_3:9332927-9332946 None:intergenic 20.0%
!!! TTTAGTTTCTTTTGTTGTAT+CGG + chr5_3:9332943-9332962 Msa0797250:intron 20.0%
!!! TATAATATTAATGCCTTTTC+GGG + chr5_3:9333291-9333310 Msa0797250:intron 20.0%
!!! TTATTATTTGTTGCTTTACA+GGG + chr5_3:9333384-9333403 Msa0797250:intron 20.0%
!!! ATTCCTTTAATGTTCAATTT+TGG + chr5_3:9333938-9333957 Msa0797250:intron 20.0%
!! ATACCAAAATTGAACATTAA+AGG - chr5_3:9333944-9333963 None:intergenic 20.0%
!! TAACTAATAATAAGGGAAAA+AGG + chr5_3:9334158-9334177 Msa0797250:intron 20.0%
!! AACTAATAATAAGGGAAAAA+GGG + chr5_3:9334159-9334178 Msa0797250:intron 20.0%
!!! TTTTTTTTGTTCTATCTTTC+TGG + chr5_3:9334470-9334489 Msa0797250:intron 20.0%
!!! AAGGTCTAAATATGTTTTTT+TGG + chr5_3:9334921-9334940 Msa0797250:intron 20.0%
!! AATATACCACTTATTGTTTA+TGG + chr5_3:9335005-9335024 Msa0797250:intron 20.0%
!! AAGCAAACAAAAAAATGTAT+AGG + chr5_3:9335492-9335511 Msa0797250:intron 20.0%
!! AGCAAACAAAAAAATGTATA+GGG + chr5_3:9335493-9335512 Msa0797250:intron 20.0%
!! GTTGTAAAATTGTAATAGAA+TGG - chr5_3:9336418-9336437 None:intergenic 20.0%
!! TTTACAACATTGTATATTAC+AGG + chr5_3:9336430-9336449 Msa0797250:intron 20.0%
!!! ATGATAAATACCTTTTAGTA+GGG - chr5_3:9336705-9336724 None:intergenic 20.0%
!!! TGTTGTTTAAAGTAGATTAT+TGG - chr5_3:9337399-9337418 None:intergenic 20.0%
!! AAAAAAAAAAACAGAGAACT+GGG - chr5_3:9337474-9337493 None:intergenic 20.0%
!! AAAAAAAAAAAACAGAGAAC+TGG - chr5_3:9337475-9337494 None:intergenic 20.0%
!!! AGTTCTCTGTTTTTTTTTTT+TGG + chr5_3:9337474-9337493 Msa0797250:intron 20.0%
!!! TTTTTTTTTTTTGGTCAAGT+AGG + chr5_3:9337483-9337502 Msa0797250:intron 20.0%
!!! TTCAGTTATAGTTTTGATTA+TGG + chr5_3:9338217-9338236 Msa0797250:intron 20.0%
!!! ATGGTTTTTTTTTTTTCTTC+TGG + chr5_3:9338236-9338255 Msa0797250:intron 20.0%
!!! TTTTTTTCTTCTGGAAATTT+AGG + chr5_3:9338245-9338264 Msa0797250:intron 20.0%
!!! TTTTTTCTTCTGGAAATTTA+GGG + chr5_3:9338246-9338265 Msa0797250:intron 20.0%
!! TCATTAAAAAATAAGCCATT+TGG - chr5_3:9338342-9338361 None:intergenic 20.0%
!!! TTTTTTTTTCCTTTCTGAAT+TGG - chr5_3:9338445-9338464 None:intergenic 20.0%
!!! TGTATAGTTTTCATGAATAA+AGG - chr5_3:9338629-9338648 None:intergenic 20.0%
!! GAAAATAATCTAACAACAAA+GGG - chr5_3:9338802-9338821 None:intergenic 20.0%
!! AGAAAATAATCTAACAACAA+AGG - chr5_3:9338803-9338822 None:intergenic 20.0%
!! AGGATCAAATTAATTCTTAA+TGG + chr5_3:9338965-9338984 Msa0797250:intron 20.0%
!!! ATTATTTTAGCCAAAAAAAC+TGG - chr5_3:9338993-9339012 None:intergenic 20.0%
!! AAATAAACAAAAGGAACAAT+TGG - chr5_3:9339171-9339190 None:intergenic 20.0%
!! ATGATTTCTATGTGAAATAA+AGG + chr5_3:9339372-9339391 Msa0797250:intron 20.0%
!!! ATAAAAACAACTTAATTTGC+AGG + chr5_3:9339579-9339598 Msa0797250:intron 20.0%
!!! ATGTTTCATCTTATTTTCAT+GGG - chr5_3:9339745-9339764 None:intergenic 20.0%
!! GCATTAAATAGAAATAAGAT+AGG - chr5_3:9340139-9340158 None:intergenic 20.0%
!!! ATCTTATTTCTATTTAATGC+AGG + chr5_3:9340139-9340158 Msa0797250:intron 20.0%
!! ATGCAATCTCAAATAATTAA+AGG + chr5_3:9340424-9340443 Msa0797250:three_prime_UTR 20.0%
!! GCTTATATTTATATCTAACA+TGG + chr5_3:9340714-9340733 Msa0797250:intron 20.0%
!! GAAGAATAATTTGTGCTTAT+AGG + chr5_3:9332421-9332440 Msa0797250:intron 25.0%
! TATAATATTATTGCCTCTTC+GGG + chr5_3:9332564-9332583 Msa0797250:CDS 25.0%
! CCAAATTATAAAATTCCAGT+GGG - chr5_3:9332710-9332729 None:intergenic 25.0%
!!! TCTTGCCGTTAATTTTTTAA+CGG + chr5_3:9332750-9332769 Msa0797250:intron 25.0%
! TGTTTCGAACAAGAAAAAAA+TGG - chr5_3:9332893-9332912 None:intergenic 25.0%
!!! AAAAAGTATCGTTCTTTTGT+TGG + chr5_3:9332994-9333013 Msa0797250:intron 25.0%
! ACAAATGAGAATTTATTAGG+AGG + chr5_3:9333093-9333112 Msa0797250:CDS 25.0%
! CAAATGAGAATTTATTAGGA+GGG + chr5_3:9333094-9333113 Msa0797250:CDS 25.0%
! AAATGAGAATTTATTAGGAG+GGG + chr5_3:9333095-9333114 Msa0797250:CDS 25.0%
! TTATAAAGTGAAGGTGAAAA+TGG + chr5_3:9333131-9333150 Msa0797250:CDS 25.0%
! TATAAAGTGAAGGTGAAAAT+GGG + chr5_3:9333132-9333151 Msa0797250:CDS 25.0%
!!! GTTATTATTTGTTGCTTTAC+AGG + chr5_3:9333383-9333402 Msa0797250:intron 25.0%
!!! TATTATTTGTTGCTTTACAG+GGG + chr5_3:9333385-9333404 Msa0797250:intron 25.0%
! AATGAATCATCATGATGTAA+TGG - chr5_3:9333635-9333654 None:intergenic 25.0%
!!! GTATGTCTTATTTTCTTTGA+AGG + chr5_3:9333797-9333816 Msa0797250:intron 25.0%
!! GCACTATTCAAATCATATTT+TGG + chr5_3:9333825-9333844 Msa0797250:CDS 25.0%
!!! CTATTCAAATCATATTTTGG+TGG + chr5_3:9333828-9333847 Msa0797250:CDS 25.0%
! ATTTACATATGTGAAAGTGA+TGG + chr5_3:9334100-9334119 Msa0797250:intron 25.0%
! CAAAAAAAAAAATCATCCCA+AGG - chr5_3:9334459-9334478 None:intergenic 25.0%
!!! TTCTGGTTTGCATAAAAAAT+TGG + chr5_3:9334487-9334506 Msa0797250:intron 25.0%
!! TCTGGTTTGCATAAAAAATT+GGG + chr5_3:9334488-9334507 Msa0797250:intron 25.0%
! TATGAAATACAACACACATA+TGG + chr5_3:9334588-9334607 Msa0797250:intron 25.0%
! TGTGCTTGTTCAAAAAAAAA+CGG - chr5_3:9334616-9334635 None:intergenic 25.0%
!!! TTTTTTTGAACAAGCACATA+TGG + chr5_3:9334618-9334637 Msa0797250:intron 25.0%
! AAACGTAATAGTTTACAAGA+GGG - chr5_3:9334718-9334737 None:intergenic 25.0%
! TAAACGTAATAGTTTACAAG+AGG - chr5_3:9334719-9334738 None:intergenic 25.0%
!!! GATATAACTTAGTTTGTAAC+AGG - chr5_3:9334817-9334836 None:intergenic 25.0%
! TGGAATTATGACTATCATTT+CGG - chr5_3:9334856-9334875 None:intergenic 25.0%
! GAATTTAATGTAAACTACCT+TGG + chr5_3:9334887-9334906 Msa0797250:intron 25.0%
! TACCTTGGTTAAAATAGATA+AGG + chr5_3:9334902-9334921 Msa0797250:intron 25.0%
!!! TAAGCAAAGAATTTTTTGCA+AGG - chr5_3:9334976-9334995 None:intergenic 25.0%
! CAATAAGTGGTATATTTGTA+AGG - chr5_3:9335001-9335020 None:intergenic 25.0%
!! TAGTCTCTCAGATTTTATAT+TGG + chr5_3:9335045-9335064 Msa0797250:intron 25.0%
!! AGTCTCTCAGATTTTATATT+GGG + chr5_3:9335046-9335065 Msa0797250:intron 25.0%
! CAAATTCTCTACATATTACA+GGG - chr5_3:9335317-9335336 None:intergenic 25.0%
! TCAAATTCTCTACATATTAC+AGG - chr5_3:9335318-9335337 None:intergenic 25.0%
!!! AAATTTGTTCGAGTTGAAAT+TGG - chr5_3:9335409-9335428 None:intergenic 25.0%
! TGGACTAAAATAAAACAACA+AGG + chr5_3:9335433-9335452 Msa0797250:intron 25.0%
! TAAAAAGCGATATATTTGCA+AGG + chr5_3:9335464-9335483 Msa0797250:intron 25.0%
! CAAAAAATGGTATATTTGCA+TGG + chr5_3:9335524-9335543 Msa0797250:intron 25.0%
!!! TATTGGCTTAAATATGTTGT+TGG - chr5_3:9335551-9335570 None:intergenic 25.0%
! GTTGTCACAAAAACAATAAA+TGG - chr5_3:9335742-9335761 None:intergenic 25.0%
! TTATCATTTGAATCATTGGA+TGG + chr5_3:9335766-9335785 Msa0797250:intron 25.0%
! TATCATTTGAATCATTGGAT+GGG + chr5_3:9335767-9335786 Msa0797250:intron 25.0%
!!! ATATAAAGCTTTAAGATCTC+CGG - chr5_3:9335859-9335878 None:intergenic 25.0%
!! AAGCTTTATATTACTCAAGA+AGG + chr5_3:9335868-9335887 Msa0797250:CDS 25.0%
! AATACCTTAAAATAAGGACA+TGG + chr5_3:9335939-9335958 Msa0797250:intron 25.0%
!!! TTTTTTTTAAAAGGGAACCT+TGG + chr5_3:9336009-9336028 Msa0797250:intron 25.0%
!!! GTGCGTATTATTTTGAAATT+TGG - chr5_3:9336064-9336083 None:intergenic 25.0%
!!! TGTCTGCAATTCATTTTTAT+TGG + chr5_3:9336096-9336115 Msa0797250:intron 25.0%
!!! GTCTGCAATTCATTTTTATT+GGG + chr5_3:9336097-9336116 Msa0797250:intron 25.0%
!!! TCTGCAATTCATTTTTATTG+GGG + chr5_3:9336098-9336117 Msa0797250:intron 25.0%
! AAAGGAAATAAAGGACTTAA+TGG - chr5_3:9336234-9336253 None:intergenic 25.0%
! CGCATTAATAAAGGAAATAA+AGG - chr5_3:9336243-9336262 None:intergenic 25.0%
! TCATAAAGAATGATATCAGA+TGG - chr5_3:9336389-9336408 None:intergenic 25.0%
!! GATGATAAATACCTTTTAGT+AGG - chr5_3:9336706-9336725 None:intergenic 25.0%
!!! ACTAAAAGGTATTTATCATC+TGG + chr5_3:9336706-9336725 Msa0797250:intron 25.0%
! ATGTCAAAGGAAAATTTCAT+CGG - chr5_3:9336757-9336776 None:intergenic 25.0%
! AGCAGCCATATTATTTAATA+TGG - chr5_3:9336815-9336834 None:intergenic 25.0%
! AATATTAGAGCAAACAAAAC+GGG - chr5_3:9336904-9336923 None:intergenic 25.0%
! GAATATTAGAGCAAACAAAA+CGG - chr5_3:9336905-9336924 None:intergenic 25.0%
! TTACTAGCAAATGGTTTAAA+GGG - chr5_3:9337205-9337224 None:intergenic 25.0%
! TTGAAATAGTTACTAGCAAA+TGG - chr5_3:9337214-9337233 None:intergenic 25.0%
!!! ACTTTTTAAGGTGAATACAT+GGG + chr5_3:9337526-9337545 Msa0797250:intron 25.0%
! ACAATGCATTATAATATGCA+GGG - chr5_3:9337575-9337594 None:intergenic 25.0%
! ATGGGTATAACTTGATAAAA+TGG - chr5_3:9337708-9337727 None:intergenic 25.0%
! AGGAGATTATTAAGAAACAT+GGG - chr5_3:9337910-9337929 None:intergenic 25.0%
!!! TAAGGAAAAAAGAGTTTTAG+AGG - chr5_3:9337930-9337949 None:intergenic 25.0%
!!! TACTGGATTTTAGAAATTCT+GGG - chr5_3:9338072-9338091 None:intergenic 25.0%
!!! TTACTGGATTTTAGAAATTC+TGG - chr5_3:9338073-9338092 None:intergenic 25.0%
!!! TTTTTCTTCTGGAAATTTAG+GGG + chr5_3:9338247-9338266 Msa0797250:intron 25.0%
!!! AGATAACTATGGATTTTTTC+TGG + chr5_3:9338306-9338325 Msa0797250:intron 25.0%
!!! GATAACTATGGATTTTTTCT+GGG + chr5_3:9338307-9338326 Msa0797250:intron 25.0%
!!! TAGGATATTTTGGTATCAAT+TGG + chr5_3:9338708-9338727 Msa0797250:intron 25.0%
! AAAACAAAATATTTCCCACT+TGG - chr5_3:9338753-9338772 None:intergenic 25.0%
! ACACAAATCACAAGTAATAT+AGG + chr5_3:9338945-9338964 Msa0797250:intron 25.0%
!!! GATGTTTCATCTTATTTTCA+TGG - chr5_3:9339746-9339765 None:intergenic 25.0%
! TATGTTATTGAGTGAAATTC+TGG + chr5_3:9339855-9339874 Msa0797250:intron 25.0%
! TACTTCAAAAAATTTGCCTA+CGG - chr5_3:9340046-9340065 None:intergenic 25.0%
! TTATCTAATTTACTCTCTGA+AGG + chr5_3:9340271-9340290 Msa0797250:intron 25.0%
! AAAAAAAAACCTGCAACAAA+GGG - chr5_3:9340469-9340488 None:intergenic 25.0%
! AAAAAAAAAACCTGCAACAA+AGG - chr5_3:9340470-9340489 None:intergenic 25.0%
!!! TGTTGCAGGTTTTTTTTTTA+AGG + chr5_3:9340471-9340490 Msa0797250:three_prime_UTR 25.0%
!!! AGGTTTTTTTTTTAAGGTTG+AGG + chr5_3:9340477-9340496 Msa0797250:three_prime_UTR 25.0%
! TTATGTTTCCATTAACAAGA+TGG - chr5_3:9340564-9340583 None:intergenic 25.0%
! AATACAATACAATGTGTACA+GGG - chr5_3:9340605-9340624 None:intergenic 25.0%
! AAATACAATACAATGTGTAC+AGG - chr5_3:9340606-9340625 None:intergenic 25.0%
! TATGTATTGTAAGTGTCATA+TGG - chr5_3:9340683-9340702 None:intergenic 25.0%
! TAAAGGTGAAACTATAGTAA+CGG + chr5_3:9340782-9340801 Msa0797250:three_prime_UTR 25.0%
AGAGTGTGAAAACAAAGAAA+CGG - chr5_3:9332364-9332383 None:intergenic 30.0%
AGAATCTGAACTCAAAAACT+AGG - chr5_3:9332401-9332420 None:intergenic 30.0%
ATATTACCAGACAAATTCCA+GGG - chr5_3:9332593-9332612 None:intergenic 30.0%
! AGTTAAACTTGTAGCTTTAC+CGG + chr5_3:9332675-9332694 Msa0797250:intron 30.0%
! CCCACTGGAATTTTATAATT+TGG + chr5_3:9332707-9332726 Msa0797250:intron 30.0%
GCCAAATTATAAAATTCCAG+TGG - chr5_3:9332711-9332730 None:intergenic 30.0%
AAAAATTAACGGCAAGATCA+AGG - chr5_3:9332747-9332766 None:intergenic 30.0%
!!! CTTGCCGTTAATTTTTTAAC+GGG + chr5_3:9332751-9332770 Msa0797250:intron 30.0%
!!! TTGCCGTTAATTTTTTAACG+GGG + chr5_3:9332752-9332771 Msa0797250:intron 30.0%
CTTCCCCGTTAAAAAATTAA+CGG - chr5_3:9332758-9332777 None:intergenic 30.0%
AGTTAATGAACCTAACATTG+AGG + chr5_3:9332788-9332807 Msa0797250:intron 30.0%
ACTTTATAGTTAAAACCGGT+AGG - chr5_3:9332816-9332835 None:intergenic 30.0%
TAAACATTGCTACATAAACC+CGG - chr5_3:9332864-9332883 None:intergenic 30.0%
ATTATAGCAACAACGGAAAA+GGG - chr5_3:9332920-9332939 None:intergenic 30.0%
AATTATAGCAACAACGGAAA+AGG - chr5_3:9332921-9332940 None:intergenic 30.0%
! TTTTGTTGGAAAATCCATAC+AGG + chr5_3:9333008-9333027 Msa0797250:intron 30.0%
AATGAGAATTTATTAGGAGG+GGG + chr5_3:9333096-9333115 Msa0797250:CDS 30.0%
! TTTGTTGATTGAGTTGTTAG+AGG + chr5_3:9333323-9333342 Msa0797250:intron 30.0%
ATAATGCAAACGAAAGAACT+TGG + chr5_3:9333436-9333455 Msa0797250:CDS 30.0%
! ATTGCCATTTATCTGATGTT+TGG + chr5_3:9333603-9333622 Msa0797250:intron 30.0%
AAAGCCAAACATCAGATAAA+TGG - chr5_3:9333610-9333629 None:intergenic 30.0%
TAAAACCAAACATTCTCCTT+GGG + chr5_3:9334440-9334459 Msa0797250:intron 30.0%
! TTTTGCACAGTTTATTGAAC+TGG + chr5_3:9334668-9334687 Msa0797250:intron 30.0%
TTTGCACAGTTTATTGAACT+GGG + chr5_3:9334669-9334688 Msa0797250:intron 30.0%
ATTAAATTCCTTAGAGCTGA+TGG - chr5_3:9334876-9334895 None:intergenic 30.0%
!!! GACCTTATCTATTTTAACCA+AGG - chr5_3:9334907-9334926 None:intergenic 30.0%
AAACAAGTGTGATATTTGCA+GGG - chr5_3:9334948-9334967 None:intergenic 30.0%
AAAACAAGTGTGATATTTGC+AGG - chr5_3:9334949-9334968 None:intergenic 30.0%
CAAGAACCATAAACAATAAG+TGG - chr5_3:9335014-9335033 None:intergenic 30.0%
GTGTAGTGTTTATAAAGCAT+GGG - chr5_3:9335114-9335133 None:intergenic 30.0%
TGTGTAGTGTTTATAAAGCA+TGG - chr5_3:9335115-9335134 None:intergenic 30.0%
! CAACTCGAACAAATTTTACA+TGG + chr5_3:9335413-9335432 Msa0797250:intron 30.0%
CAGTTTCATTTCAAATACAC+AGG - chr5_3:9335619-9335638 None:intergenic 30.0%
ACATGTATTTGCAGAAATCA+TGG + chr5_3:9335807-9335826 Msa0797250:intron 30.0%
TTATCCACAAAATCTTTCAC+CGG + chr5_3:9335837-9335856 Msa0797250:CDS 30.0%
! GGTAAATATTTTACTCTCCA+AGG - chr5_3:9336029-9336048 None:intergenic 30.0%
GAAATTTGGTACATATCAGT+AGG - chr5_3:9336050-9336069 None:intergenic 30.0%
!! CTGCAATTCATTTTTATTGG+GGG + chr5_3:9336099-9336118 Msa0797250:intron 30.0%
!! AATTCATTTTTATTGGGGGA+GGG + chr5_3:9336103-9336122 Msa0797250:intron 30.0%
CGTTATGTATCTCAAGTTAT+TGG + chr5_3:9336148-9336167 Msa0797250:intron 30.0%
AATCTTCTTATGTCGTCAAA+AGG + chr5_3:9336479-9336498 Msa0797250:CDS 30.0%
AAAACCATAAAACAGTTAGC+AGG - chr5_3:9336553-9336572 None:intergenic 30.0%
! GCTAACTGTTTTATGGTTTT+AGG + chr5_3:9336553-9336572 Msa0797250:intron 30.0%
TTGGGTTTGAATGATAAGAT+TGG + chr5_3:9336649-9336668 Msa0797250:CDS 30.0%
TGTCAAAGGAAAATTTCATC+GGG - chr5_3:9336756-9336775 None:intergenic 30.0%
!! ACTTTCTCATTTTTCCAACT+TGG + chr5_3:9336841-9336860 Msa0797250:intron 30.0%
! TCAACAAATCTATTTTGCAG+TGG + chr5_3:9336939-9336958 Msa0797250:intron 30.0%
TCGTCAAATTTACACATTGA+TGG - chr5_3:9336995-9337014 None:intergenic 30.0%
ATCAATGTGTAAATTTGACG+AGG + chr5_3:9336994-9337013 Msa0797250:CDS 30.0%
TTGACAAAACAAGAATCAAC+AGG - chr5_3:9337090-9337109 None:intergenic 30.0%
! AGGTATGCATGTGATATTTT+TGG - chr5_3:9337129-9337148 None:intergenic 30.0%
TACTAGCAAATGGTTTAAAG+GGG - chr5_3:9337204-9337223 None:intergenic 30.0%
GTTACTAGCAAATGGTTTAA+AGG - chr5_3:9337206-9337225 None:intergenic 30.0%
!!! CTTCTGTTGACTTTTGTATT+AGG + chr5_3:9337248-9337267 Msa0797250:intron 30.0%
ATGAAGATCTACCATGAAAT+AGG - chr5_3:9337284-9337303 None:intergenic 30.0%
!!! TGGCTAGAATTCACTTTTTA+AGG + chr5_3:9337514-9337533 Msa0797250:intron 30.0%
!!! CACTTTTTAAGGTGAATACA+TGG + chr5_3:9337525-9337544 Msa0797250:intron 30.0%
!!! CTTTTTAAGGTGAATACATG+GGG + chr5_3:9337527-9337546 Msa0797250:intron 30.0%
CAATGCATTATAATATGCAG+GGG - chr5_3:9337574-9337593 None:intergenic 30.0%
GACAATGCATTATAATATGC+AGG - chr5_3:9337576-9337595 None:intergenic 30.0%
AGATTATTAAGAAACATGGG+GGG - chr5_3:9337907-9337926 None:intergenic 30.0%
GAGATTATTAAGAAACATGG+GGG - chr5_3:9337908-9337927 None:intergenic 30.0%
GGAGATTATTAAGAAACATG+GGG - chr5_3:9337909-9337928 None:intergenic 30.0%
GAGGAGATTATTAAGAAACA+TGG - chr5_3:9337911-9337930 None:intergenic 30.0%
AGAAAGTAACAGAGAACTTT+GGG - chr5_3:9338098-9338117 None:intergenic 30.0%
AAGAAAGTAACAGAGAACTT+TGG - chr5_3:9338099-9338118 None:intergenic 30.0%
! ATGGTTTGTGACTTTGATTT+GGG + chr5_3:9338180-9338199 Msa0797250:intron 30.0%
TTTCAATGACATATTGGAGA+AGG + chr5_3:9338279-9338298 Msa0797250:intron 30.0%
GAGAAGGAAAAAGATAACTA+TGG + chr5_3:9338295-9338314 Msa0797250:intron 30.0%
TAAAAAATAAGCCATTTGGC+CGG - chr5_3:9338338-9338357 None:intergenic 30.0%
TGAACAGAAAAAAGAATTCC+AGG - chr5_3:9338556-9338575 None:intergenic 30.0%
CTTTCTAAATAAACAAGTCC+AGG - chr5_3:9338594-9338613 None:intergenic 30.0%
CTTTATCAATTTGCATTGCT+TGG + chr5_3:9338918-9338937 Msa0797250:intron 30.0%
TTGTAAGTCAAATCGAATGA+AGG + chr5_3:9339134-9339153 Msa0797250:intron 30.0%
TAAACAAAAGGAACAATTGG+AGG - chr5_3:9339168-9339187 None:intergenic 30.0%
! CAGCTATTGATTGTTTAGTT+TGG + chr5_3:9339328-9339347 Msa0797250:CDS 30.0%
GAAATAAAGGTCATCGAAAT+TGG + chr5_3:9339385-9339404 Msa0797250:intron 30.0%
CTATAATCAAACAGATAACC+TGG + chr5_3:9339490-9339509 Msa0797250:intron 30.0%
CAAATACTTATACGGTAATC+AGG - chr5_3:9339768-9339787 None:intergenic 30.0%
TACCGTATAAGTATTTGTGA+AGG + chr5_3:9339771-9339790 Msa0797250:intron 30.0%
AGCCTTCACAAATACTTATA+CGG - chr5_3:9339776-9339795 None:intergenic 30.0%
GGCTTATTCATGAAATTTGA+TGG + chr5_3:9339792-9339811 Msa0797250:intron 30.0%
ATTGAGTGAAATTCTGGATT+AGG + chr5_3:9339861-9339880 Msa0797250:intron 30.0%
! AAATCTGATGATGAATACAC+AGG - chr5_3:9339888-9339907 None:intergenic 30.0%
!!! ATCCTTTTTCAAATGCCTTT+TGG + chr5_3:9339990-9340009 Msa0797250:intron 30.0%
!!! TCCTTTTTCAAATGCCTTTT+GGG + chr5_3:9339991-9340010 Msa0797250:intron 30.0%
! TTTACGTGTTCGTTTTCTTA+AGG + chr5_3:9340184-9340203 Msa0797250:CDS 30.0%
!!! TTTGCATCTTTTTGAAACTC+TGG + chr5_3:9340246-9340265 Msa0797250:intron 30.0%
ATACAATACAATGTGTACAG+GGG - chr5_3:9340604-9340623 None:intergenic 30.0%
ACTTACAATACATACAGTCT+TGG + chr5_3:9340689-9340708 Msa0797250:intron 30.0%
CTTACAATACATACAGTCTT+GGG + chr5_3:9340690-9340709 Msa0797250:intron 30.0%
TTTATCATCTTTCTGTTGAG+AGG - chr5_3:9340766-9340785 None:intergenic 30.0%
TCTCAACAGAAAGATGATAA+AGG + chr5_3:9340765-9340784 Msa0797250:three_prime_UTR 30.0%
!! GAAATTGGAAGTTGATACAC+TGG + chr5_3:9332174-9332193 Msa0797250:five_prime_UTR 35.0%
!! CATTTTAGTGTAATGCAGCT+AGG + chr5_3:9332534-9332553 Msa0797250:CDS 35.0%
CATATTACCAGACAAATTCC+AGG - chr5_3:9332594-9332613 None:intergenic 35.0%
GAATTTGTCTGGTAATATGC+AGG + chr5_3:9332595-9332614 Msa0797250:intron 35.0%
ATGCAGGAGAATATGTTTAC+CGG + chr5_3:9332611-9332630 Msa0797250:intron 35.0%
AGTCCATGAAGTAACATTAC+CGG - chr5_3:9332645-9332664 None:intergenic 35.0%
TTCCAGTGGGAAAATTAAAC+CGG - chr5_3:9332697-9332716 None:intergenic 35.0%
!!! TTTTTTAACGGGGAAGATTC+CGG + chr5_3:9332762-9332781 Msa0797250:intron 35.0%
!!! AGTTTTTTTGTCGGGTCTAA+TGG + chr5_3:9332833-9332852 Msa0797250:intron 35.0%
!!! GTTTTTTTGTCGGGTCTAAT+GGG + chr5_3:9332834-9332853 Msa0797250:intron 35.0%
AAACATTGCTACATAAACCC+GGG - chr5_3:9332863-9332882 None:intergenic 35.0%
TCAAACACAGATTCTGTATC+AGG - chr5_3:9333207-9333226 None:intergenic 35.0%
TGAGTCAGAAATCGAAACAT+TGG + chr5_3:9333224-9333243 Msa0797250:intron 35.0%
GAGTCAGAAATCGAAACATT+GGG + chr5_3:9333225-9333244 Msa0797250:intron 35.0%
!! GAAACATGGTTGATGCTTTT+CGG + chr5_3:9333407-9333426 Msa0797250:CDS 35.0%
! GATGCTCTTTCTTTTACATG+AGG + chr5_3:9333485-9333504 Msa0797250:CDS 35.0%
CTCAGATAGATTACAAAGGA+TGG - chr5_3:9333669-9333688 None:intergenic 35.0%
TCGTCTCAGATAGATTACAA+AGG - chr5_3:9333673-9333692 None:intergenic 35.0%
! TTGTAATCTATCTGAGACGA+AGG + chr5_3:9333673-9333692 Msa0797250:intron 35.0%
TGCATCTTATTCTTGATGCT+CGG + chr5_3:9333734-9333753 Msa0797250:intron 35.0%
AATGCCAGACAGTTATGAAT+AGG + chr5_3:9334245-9334264 Msa0797250:intron 35.0%
ATCTCCTATTCATAACTGTC+TGG - chr5_3:9334252-9334271 None:intergenic 35.0%
AGACAGTTATGAATAGGAGA+TGG + chr5_3:9334251-9334270 Msa0797250:intron 35.0%
GACAGTTATGAATAGGAGAT+GGG + chr5_3:9334252-9334271 Msa0797250:intron 35.0%
ACAGTTATGAATAGGAGATG+GGG + chr5_3:9334253-9334272 Msa0797250:intron 35.0%
!!! ATGGGGTATTTTGGAATCAT+GGG + chr5_3:9334270-9334289 Msa0797250:intron 35.0%
GTAAAACCAAACATTCTCCT+TGG + chr5_3:9334439-9334458 Msa0797250:intron 35.0%
AATTGGGTACTTATACGAAG+AGG + chr5_3:9334504-9334523 Msa0797250:intron 35.0%
ATTGGGTACTTATACGAAGA+GGG + chr5_3:9334505-9334524 Msa0797250:intron 35.0%
TTGTAGTTGACAGAAACTCT+AGG + chr5_3:9334741-9334760 Msa0797250:intron 35.0%
! AGAAACTCTAGGTTAGCTAA+GGG + chr5_3:9334752-9334771 Msa0797250:intron 35.0%
TCATAATTCCATCAGCTCTA+AGG + chr5_3:9334865-9334884 Msa0797250:intron 35.0%
TCACACATTGCTTAGAGATA+TGG - chr5_3:9335140-9335159 None:intergenic 35.0%
AGGGACTATGTTGCAAATTT+CGG - chr5_3:9335267-9335286 None:intergenic 35.0%
!! TGATTTTAGTCCCTCCAATA+TGG + chr5_3:9335335-9335354 Msa0797250:intron 35.0%
!! GATTTTAGTCCCTCCAATAT+GGG + chr5_3:9335336-9335355 Msa0797250:intron 35.0%
TAGGGACTAGAAGCAAAAAA+TGG + chr5_3:9335511-9335530 Msa0797250:intron 35.0%
AAGCCAATAGATAATAACCC+AGG + chr5_3:9335562-9335581 Msa0797250:intron 35.0%
AGCCAATAGATAATAACCCA+GGG + chr5_3:9335563-9335582 Msa0797250:intron 35.0%
TTCCCTGGGTTATTATCTAT+TGG - chr5_3:9335568-9335587 None:intergenic 35.0%
CATCTATCTATTCTGCTAAC+AGG + chr5_3:9335685-9335704 Msa0797250:intron 35.0%
TTTGCAGAAATCATGGACTT+TGG + chr5_3:9335814-9335833 Msa0797250:intron 35.0%
AACCAACCTTGGATGAAAAA+GGG - chr5_3:9335903-9335922 None:intergenic 35.0%
AAACCAACCTTGGATGAAAA+AGG - chr5_3:9335904-9335923 None:intergenic 35.0%
ATAGGACACAATCATGTTCA+TGG + chr5_3:9335973-9335992 Msa0797250:intron 35.0%
!! CAATTCATTTTTATTGGGGG+AGG + chr5_3:9336102-9336121 Msa0797250:intron 35.0%
CATAACGAACAGATATCAGT+GGG - chr5_3:9336135-9336154 None:intergenic 35.0%
ACATAACGAACAGATATCAG+TGG - chr5_3:9336136-9336155 None:intergenic 35.0%
TCCTTTATTAATGCGTGCAA+TGG + chr5_3:9336248-9336267 Msa0797250:intron 35.0%
ACCATTGCACGCATTAATAA+AGG - chr5_3:9336252-9336271 None:intergenic 35.0%
TTATTAATGCGTGCAATGGT+TGG + chr5_3:9336252-9336271 Msa0797250:intron 35.0%
TATTAATGCGTGCAATGGTT+GGG + chr5_3:9336253-9336272 Msa0797250:intron 35.0%
! CCTCGTTCTTTTTGTATACA+AGG - chr5_3:9336355-9336374 None:intergenic 35.0%
CCTTGTATACAAAAAGAACG+AGG + chr5_3:9336352-9336371 Msa0797250:CDS 35.0%
TGTATACAAAAAGAACGAGG+TGG + chr5_3:9336355-9336374 Msa0797250:intron 35.0%
AAACAGCAACATGCAATCAA+AGG - chr5_3:9336521-9336540 None:intergenic 35.0%
! ATTGCCTGCTAACTGTTTTA+TGG + chr5_3:9336546-9336565 Msa0797250:intron 35.0%
! CTTATGAAGTGCTTTCTATC+TGG + chr5_3:9336610-9336629 Msa0797250:CDS 35.0%
TTCAAACCCAACTTCAAATC+AGG - chr5_3:9336640-9336659 None:intergenic 35.0%
TAAGTTGTGACTCTTTCTCA+AGG - chr5_3:9336675-9336694 None:intergenic 35.0%
TTAAATCACGCCCTACTAAA+AGG + chr5_3:9336692-9336711 Msa0797250:CDS 35.0%
! TCCTTTTAACATGCTGTACT+GGG + chr5_3:9336864-9336883 Msa0797250:intron 35.0%
AAATTTGACGAGGTTCAACT+CGG + chr5_3:9337004-9337023 Msa0797250:CDS 35.0%
ATCAGTTCAAATTCACCATC+TGG - chr5_3:9337053-9337072 None:intergenic 35.0%
!!! GCATGTGATATTTTTGGTGT+AGG - chr5_3:9337123-9337142 None:intergenic 35.0%
TATCACATGCATACCTTTGT+AGG + chr5_3:9337133-9337152 Msa0797250:intron 35.0%
TGCATACCTTTGTAGGAAAT+AGG + chr5_3:9337140-9337159 Msa0797250:intron 35.0%
ACTTGTCCTATTTCCTACAA+AGG - chr5_3:9337149-9337168 None:intergenic 35.0%
TTTGTAGGAAATAGGACAAG+TGG + chr5_3:9337148-9337167 Msa0797250:intron 35.0%
TTGTAGGAAATAGGACAAGT+GGG + chr5_3:9337149-9337168 Msa0797250:intron 35.0%
ACTAGCAAATGGTTTAAAGG+GGG - chr5_3:9337203-9337222 None:intergenic 35.0%
TACAAAAGTCAACAGAAGCT+CGG - chr5_3:9337246-9337265 None:intergenic 35.0%
GCACTTGATATCCTATTTCA+TGG + chr5_3:9337270-9337289 Msa0797250:intron 35.0%
ATGGAACAAAGCTCTTTCAA+AGG - chr5_3:9337366-9337385 None:intergenic 35.0%
! GATTATTGGAGTGTCTTAGA+TGG - chr5_3:9337385-9337404 None:intergenic 35.0%
!!! TTTTTTTTGGTCAAGTAGGC+TGG + chr5_3:9337487-9337506 Msa0797250:intron 35.0%
! CCTTGGTAATAAAGAGAACT+GGG - chr5_3:9337631-9337650 None:intergenic 35.0%
! TCCTTGGTAATAAAGAGAAC+TGG - chr5_3:9337632-9337651 None:intergenic 35.0%
! TTCATTGGTGATCCTACTTA+TGG + chr5_3:9337670-9337689 Msa0797250:intron 35.0%
! TCATTGGTGATCCTACTTAT+GGG + chr5_3:9337671-9337690 Msa0797250:intron 35.0%
AGAACTAGATACCCATAAGT+AGG - chr5_3:9337685-9337704 None:intergenic 35.0%
GTATGTCAACTTCTTAGGAT+GGG - chr5_3:9337726-9337745 None:intergenic 35.0%
TGTATGTCAACTTCTTAGGA+TGG - chr5_3:9337727-9337746 None:intergenic 35.0%
GCAATGTATGTCAACTTCTT+AGG - chr5_3:9337731-9337750 None:intergenic 35.0%
TGACATAACTCCCGTTATTA+GGG + chr5_3:9337863-9337882 Msa0797250:intron 35.0%
ATTATTAAGAAACATGGGGG+GGG - chr5_3:9337905-9337924 None:intergenic 35.0%
GATTATTAAGAAACATGGGG+GGG - chr5_3:9337906-9337925 None:intergenic 35.0%
! ATCCAAAGTTTGTTTGCTCT+TGG + chr5_3:9338122-9338141 Msa0797250:intron 35.0%
GAGATGAATATGCAATCTGA+TGG + chr5_3:9338161-9338180 Msa0797250:intron 35.0%
! GATGGTTTGTGACTTTGATT+TGG + chr5_3:9338179-9338198 Msa0797250:intron 35.0%
! TGGAAATTTAGGGGTTTTCT+GGG + chr5_3:9338256-9338275 Msa0797250:intron 35.0%
TCTGGGTTTCAATGACATAT+TGG + chr5_3:9338273-9338292 Msa0797250:intron 35.0%
!!! GGATTTTTTCTGGGTTTATC+CGG + chr5_3:9338316-9338335 Msa0797250:intron 35.0%
GACACATTGTAATAACCCAA+AGG + chr5_3:9338418-9338437 Msa0797250:intron 35.0%
TTAAGTTTGACCCATTTCCT+GGG - chr5_3:9338487-9338506 None:intergenic 35.0%
! TTTAAGTTTGACCCATTTCC+TGG - chr5_3:9338488-9338507 None:intergenic 35.0%
TCATTAACATGACTCGTGAT+AGG + chr5_3:9338689-9338708 Msa0797250:intron 35.0%
! TGACTCGTGATAGGATATTT+TGG + chr5_3:9338698-9338717 Msa0797250:intron 35.0%
! ATTTTATACCAACGCTCTCA+AGG - chr5_3:9338866-9338885 None:intergenic 35.0%
!!! CTTAATGGTGCCAGTTTTTT+TGG + chr5_3:9338980-9338999 Msa0797250:intron 35.0%
ATGGTTGGCAATACTTTGAA+GGG - chr5_3:9339057-9339076 None:intergenic 35.0%
ACGGATGGAAGTAAATGTTA+AGG + chr5_3:9339095-9339114 Msa0797250:CDS 35.0%
!! TTTCAGGTAAAGAGTGTCTT+TGG + chr5_3:9339204-9339223 Msa0797250:intron 35.0%
!!! CTCGTTTTTGCTGTTTGTTT+CGG - chr5_3:9339273-9339292 None:intergenic 35.0%
! TGCATTATATTTTGCTCGAC+CGG - chr5_3:9339310-9339329 None:intergenic 35.0%
TGCAGGATAAGAAAATTTCC+TGG + chr5_3:9339596-9339615 Msa0797250:intron 35.0%
GCAGGATAAGAAAATTTCCT+GGG + chr5_3:9339597-9339616 Msa0797250:intron 35.0%
CGATGACTGAAAAGAAATCA+TGG + chr5_3:9339663-9339682 Msa0797250:intron 35.0%
TTCAAAAAATTTGCCTACGG+TGG - chr5_3:9340043-9340062 None:intergenic 35.0%
! TAATTTACTCTCTGAAGGTG+TGG + chr5_3:9340276-9340295 Msa0797250:intron 35.0%
! AATTTACTCTCTGAAGGTGT+GGG + chr5_3:9340277-9340296 Msa0797250:intron 35.0%
GTCAAACTTCAGGGATTAAT+TGG + chr5_3:9340392-9340411 Msa0797250:three_prime_UTR 35.0%
AAACTTCAGGGATTAATTGG+TGG + chr5_3:9340395-9340414 Msa0797250:three_prime_UTR 35.0%
! TTAAAGGTGCAGTTCAATCT+AGG + chr5_3:9340440-9340459 Msa0797250:three_prime_UTR 35.0%
TTCCAAAGCCATCTTGTTAA+TGG + chr5_3:9340553-9340572 Msa0797250:three_prime_UTR 35.0%
TTCCATTAACAAGATGGCTT+TGG - chr5_3:9340558-9340577 None:intergenic 35.0%
TTTGACAATACACCTCCCTT+TGG - chr5_3:9331972-9331991 None:intergenic 40.0%
TGAGAGTAGAAGAGAAGAAG+CGG - chr5_3:9332058-9332077 None:intergenic 40.0%
GGAAGAAGATCAATCGGAAA+CGG - chr5_3:9332135-9332154 None:intergenic 40.0%
GTTTCCGATTGATCTTCTTC+CGG + chr5_3:9332134-9332153 Msa0797250:five_prime_UTR 40.0%
TCAACTTCCAATTTCACCGA+CGG - chr5_3:9332169-9332188 None:intergenic 40.0%
!! TGGAAGTTGATACACTGGAT+CGG + chr5_3:9332179-9332198 Msa0797250:five_prime_UTR 40.0%
GAGGTTCAAGAAGTAAACAG+CGG - chr5_3:9332223-9332242 None:intergenic 40.0%
AAGATCTCTACTGGGAAAGA+GGG - chr5_3:9332315-9332334 None:intergenic 40.0%
CATCAGTGAAGATCTCTACT+GGG - chr5_3:9332323-9332342 None:intergenic 40.0%
TCATCAGTGAAGATCTCTAC+TGG - chr5_3:9332324-9332343 None:intergenic 40.0%
CGATTGAAGCGTGTATGTTA+TGG + chr5_3:9332463-9332482 Msa0797250:intron 40.0%
! TTCCCGGTAATGTTACTTCA+TGG + chr5_3:9332639-9332658 Msa0797250:intron 40.0%
GTCCATGAAGTAACATTACC+GGG - chr5_3:9332644-9332663 None:intergenic 40.0%
!!! TACCGGTTTAATTTTCCCAC+TGG + chr5_3:9332692-9332711 Msa0797250:intron 40.0%
GTTAGGTTCATTAACTCAGC+CGG - chr5_3:9332784-9332803 None:intergenic 40.0%
GGTTGTCATAAAAGCCTGTA+TGG - chr5_3:9333025-9333044 None:intergenic 40.0%
GAATTTATTAGGAGGGGGTT+CGG + chr5_3:9333101-9333120 Msa0797250:CDS 40.0%
AATTTATTAGGAGGGGGTTC+GGG + chr5_3:9333102-9333121 Msa0797250:CDS 40.0%
GAAAATGGGTCACATAGTTG+CGG + chr5_3:9333146-9333165 Msa0797250:CDS 40.0%
TAGTTGCGGTGAAAAAGCTT+CGG + chr5_3:9333160-9333179 Msa0797250:CDS 40.0%
CTCATTTACGAGCTTCTAGA+TGG + chr5_3:9333888-9333907 Msa0797250:CDS 40.0%
TACCACTGAAAGCTAATGCA+AGG + chr5_3:9333981-9334000 Msa0797250:intron 40.0%
!! ATCCTTGCATTAGCTTTCAG+TGG - chr5_3:9333986-9334005 None:intergenic 40.0%
AATGCACCTTCCAGAATCAA+GGG - chr5_3:9334127-9334146 None:intergenic 40.0%
ACGAGTGGAGGAAAAATACT+GGG + chr5_3:9334182-9334201 Msa0797250:intron 40.0%
!! GAATAGGAGATGGGGTATTT+TGG + chr5_3:9334261-9334280 Msa0797250:intron 40.0%
!!! GATGGGGTATTTTGGAATCA+TGG + chr5_3:9334269-9334288 Msa0797250:intron 40.0%
!!! TATTTTGGAATCATGGGAGG+TGG + chr5_3:9334276-9334295 Msa0797250:intron 40.0%
ATCATCCCAAGGAGAATGTT+TGG - chr5_3:9334448-9334467 None:intergenic 40.0%
! CAGAAACTCTAGGTTAGCTA+AGG + chr5_3:9334751-9334770 Msa0797250:intron 40.0%
!! GGGTTTTGTAAGGATGAGTT+AGG - chr5_3:9335072-9335091 None:intergenic 40.0%
TTCATTGTGTTGGGTGTGAA+GGG - chr5_3:9335173-9335192 None:intergenic 40.0%
TCCAACACCTTCATTGTGTT+GGG - chr5_3:9335182-9335201 None:intergenic 40.0%
CTTATGTAGCCCATATTGGA+GGG - chr5_3:9335348-9335367 None:intergenic 40.0%
AGTCCTTATGTAGCCCATAT+TGG - chr5_3:9335352-9335371 None:intergenic 40.0%
!! GTTCGAGTTGAAATTGGTCT+CGG - chr5_3:9335403-9335422 None:intergenic 40.0%
! ATCTCCGGTGAAAGATTTTG+TGG - chr5_3:9335844-9335863 None:intergenic 40.0%
ACCAACCTTGGATGAAAAAG+GGG - chr5_3:9335902-9335921 None:intergenic 40.0%
!!! GCGACCATGTCCTTATTTTA+AGG - chr5_3:9335946-9335965 None:intergenic 40.0%
AAATGCGACGTTGCAAGTTA+CGG + chr5_3:9336304-9336323 Msa0797250:CDS 40.0%
ACAGGTGTTCCTAGATATTG+TGG + chr5_3:9336448-9336467 Msa0797250:intron 40.0%
TCACACTCTCCACAATATCT+AGG - chr5_3:9336460-9336479 None:intergenic 40.0%
! TGGAATGCCTGATTTGAAGT+TGG + chr5_3:9336630-9336649 Msa0797250:CDS 40.0%
! GGAATGCCTGATTTGAAGTT+GGG + chr5_3:9336631-9336650 Msa0797250:CDS 40.0%
TTCATCGGGAGGAAAAATGT+GGG - chr5_3:9336742-9336761 None:intergenic 40.0%
TTTCATCGGGAGGAAAAATG+TGG - chr5_3:9336743-9336762 None:intergenic 40.0%
CAAAGGAAAATTTCATCGGG+AGG - chr5_3:9336753-9336772 None:intergenic 40.0%
GCATGTTAAAAGGACCAAGT+TGG - chr5_3:9336858-9336877 None:intergenic 40.0%
! GTCCTTTTAACATGCTGTAC+TGG + chr5_3:9336863-9336882 Msa0797250:intron 40.0%
TCCCAGTACAGCATGTTAAA+AGG - chr5_3:9336868-9336887 None:intergenic 40.0%
ATTAGAGCAAACAAAACGGG+AGG - chr5_3:9336901-9336920 None:intergenic 40.0%
AGTTCAAATTCACCATCTGG+AGG - chr5_3:9337050-9337069 None:intergenic 40.0%
AAATAGGACAAGTGGGTAGA+AGG + chr5_3:9337156-9337175 Msa0797250:intron 40.0%
AATAGGACAAGTGGGTAGAA+GGG + chr5_3:9337157-9337176 Msa0797250:intron 40.0%
ATCACCGTCACACTTTGATA+GGG + chr5_3:9337302-9337321 Msa0797250:intron 40.0%
GTTTCCCTATCAAAGTGTGA+CGG - chr5_3:9337309-9337328 None:intergenic 40.0%
ACAGAGAACTGGGTGAAAAT+GGG - chr5_3:9337464-9337483 None:intergenic 40.0%
AACAGAGAACTGGGTGAAAA+TGG - chr5_3:9337465-9337484 None:intergenic 40.0%
ATTATAATATGCAGGGGTCG+GGG - chr5_3:9337568-9337587 None:intergenic 40.0%
CATTATAATATGCAGGGGTC+GGG - chr5_3:9337569-9337588 None:intergenic 40.0%
GCATTATAATATGCAGGGGT+CGG - chr5_3:9337570-9337589 None:intergenic 40.0%
CCCAGTTCTCTTTATTACCA+AGG + chr5_3:9337628-9337647 Msa0797250:intron 40.0%
TTACCAAGGATAGAGTCACA+AGG + chr5_3:9337642-9337661 Msa0797250:intron 40.0%
AGTCACAAGGTTCACTTCAT+TGG + chr5_3:9337655-9337674 Msa0797250:intron 40.0%
!! CGCTGCTTTGGAAAGATAAA+AGG - chr5_3:9337784-9337803 None:intergenic 40.0%
GTGACATAACTCCCGTTATT+AGG + chr5_3:9337862-9337881 Msa0797250:intron 40.0%
ACCTCTACCATCCATTCAAA+GGG - chr5_3:9337968-9337987 None:intergenic 40.0%
AACCTCTACCATCCATTCAA+AGG - chr5_3:9337969-9337988 None:intergenic 40.0%
ATGGATGGTAGAGGTTTCAA+TGG + chr5_3:9337973-9337992 Msa0797250:intron 40.0%
GATCCTCTCATGTGATATGA+GGG - chr5_3:9338000-9338019 None:intergenic 40.0%
CGTATGTGTAACTAGCTAGA+GGG - chr5_3:9338027-9338046 None:intergenic 40.0%
ACGTATGTGTAACTAGCTAG+AGG - chr5_3:9338028-9338047 None:intergenic 40.0%
!! CAGAGAACTTTGGGTTTTAC+TGG - chr5_3:9338089-9338108 None:intergenic 40.0%
TGCCAAGAGCAAACAAACTT+TGG - chr5_3:9338127-9338146 None:intergenic 40.0%
! CTGGAAATTTAGGGGTTTTC+TGG + chr5_3:9338255-9338274 Msa0797250:intron 40.0%
GCAAGCTGATAATAGCTTGA+AGG + chr5_3:9338384-9338403 Msa0797250:intron 40.0%
CCTTTCTGAATTGGTCCTTT+GGG - chr5_3:9338436-9338455 None:intergenic 40.0%
TCCTTTCTGAATTGGTCCTT+TGG - chr5_3:9338437-9338456 None:intergenic 40.0%
GGGTCAAACTTAAACGATTG+CGG + chr5_3:9338494-9338513 Msa0797250:intron 40.0%
GGTCAAACTTAAACGATTGC+GGG + chr5_3:9338495-9338514 Msa0797250:intron 40.0%
AAGAATTCCAGGACAGTATC+AGG - chr5_3:9338545-9338564 None:intergenic 40.0%
TCATGCTGTTCACAATTTCC+TGG + chr5_3:9338573-9338592 Msa0797250:intron 40.0%
!! TATTTCCCACTTGGTGATGT+CGG - chr5_3:9338744-9338763 None:intergenic 40.0%
! TATCAGGTATCGTATCACTG+AGG + chr5_3:9339020-9339039 Msa0797250:intron 40.0%
! ATCAGGTATCGTATCACTGA+GGG + chr5_3:9339021-9339040 Msa0797250:intron 40.0%
GATGGTTGGCAATACTTTGA+AGG - chr5_3:9339058-9339077 None:intergenic 40.0%
!! CAAAGTATTGCCAACCATCA+AGG + chr5_3:9339059-9339078 Msa0797250:CDS 40.0%
GTGCAAAGATGTTTGCACTA+GGG + chr5_3:9339226-9339245 Msa0797250:CDS 40.0%
TGCAAAGATGTTTGCACTAG+GGG + chr5_3:9339227-9339246 Msa0797250:CDS 40.0%
TCAATTTCTGCGCTCAAAGT+TGG - chr5_3:9339632-9339651 None:intergenic 40.0%
ACCTGAAACTCCATCTGAAT+CGG - chr5_3:9339698-9339717 None:intergenic 40.0%
TTCTTAGCTTAGCTAGTGTC+AGG + chr5_3:9339823-9339842 Msa0797250:intron 40.0%
!!! ACTCCTGTTTTAGTTTGCAC+TGG + chr5_3:9339914-9339933 Msa0797250:intron 40.0%
!! GCCCAAAAGGCATTTGAAAA+AGG - chr5_3:9339995-9340014 None:intergenic 40.0%
AAAAAATTTGCCTACGGTGG+AGG - chr5_3:9340040-9340059 None:intergenic 40.0%
ATATGTCACATTCACCTGCA+TGG + chr5_3:9340066-9340085 Msa0797250:intron 40.0%
CATGAAGAGAAAGACGAGTT+TGG - chr5_3:9340101-9340120 None:intergenic 40.0%
AAACCAGATGCTGTGAACAT+GGG - chr5_3:9340167-9340186 None:intergenic 40.0%
TAAACCAGATGCTGTGAACA+TGG - chr5_3:9340168-9340187 None:intergenic 40.0%
TGGGTACAACACTGTTGAAT+GGG + chr5_3:9340307-9340326 Msa0797250:CDS 40.0%
AAGCAGGATCATACGAGATT+AGG + chr5_3:9340345-9340364 Msa0797250:CDS 40.0%
AGATTAGGTGCTAGACACAT+TGG + chr5_3:9340360-9340379 Msa0797250:exon 40.0%
GATTAGGTGCTAGACACATT+GGG + chr5_3:9340361-9340380 Msa0797250:exon 40.0%
! GTTGCTGTTGTCAAACTTCA+GGG + chr5_3:9340383-9340402 Msa0797250:three_prime_UTR 40.0%
ATGGTATGAGATTGCTTCGA+TGG + chr5_3:9340733-9340752 Msa0797250:three_prime_UTR 40.0%
! AGGGAGGTGTATTGTCAAAC+TGG + chr5_3:9331973-9331992 Msa0797250:five_prime_UTR 45.0%
GTCAATCCGACGACTCATAA+CGG + chr5_3:9332002-9332021 Msa0797250:five_prime_UTR 45.0%
AGAAGATCAATCGGAAACGG+TGG - chr5_3:9332132-9332151 None:intergenic 45.0%
TTCGCCGGAAGAAGATCAAT+CGG - chr5_3:9332141-9332160 None:intergenic 45.0%
GTTTACTTCTTGAACCTCCG+TGG + chr5_3:9332225-9332244 Msa0797250:CDS 45.0%
GATTGATGAGAACGTCACCA+CGG - chr5_3:9332245-9332264 None:intergenic 45.0%
GAAGATCTCTACTGGGAAAG+AGG - chr5_3:9332316-9332335 None:intergenic 45.0%
ATGTTTACCGGAGTGATTCC+CGG + chr5_3:9332623-9332642 Msa0797250:intron 45.0%
AACATTACCGGGAATCACTC+CGG - chr5_3:9332633-9332652 None:intergenic 45.0%
! CCTAACATTGAGGTACCTAC+CGG + chr5_3:9332798-9332817 Msa0797250:intron 45.0%
! CGGTTTTTGCGTCTCTTTTG+TGG + chr5_3:9332963-9332982 Msa0797250:intron 45.0%
GGGTCAGGGTTATAAAGTGA+AGG + chr5_3:9333122-9333141 Msa0797250:CDS 45.0%
AGTTGCGGTGAAAAAGCTTC+GGG + chr5_3:9333161-9333180 Msa0797250:CDS 45.0%
!! TAATGCCTTTTCGGGAACAC+TGG + chr5_3:9333299-9333318 Msa0797250:intron 45.0%
CAAATCCAGTGTTCCCGAAA+AGG - chr5_3:9333307-9333326 None:intergenic 45.0%
! GTTGCTTTACAGGGGAAACA+TGG + chr5_3:9333393-9333412 Msa0797250:intron 45.0%
AGCGCAAGCTACATTAGCAT+TGG - chr5_3:9333545-9333564 None:intergenic 45.0%
!! CGCTTTCAAGTTCGTTGTAG+AGG + chr5_3:9333561-9333580 Msa0797250:CDS 45.0%
! TGTCTTTGTTGCTTGTGCGT+AGG + chr5_3:9333702-9333721 Msa0797250:intron 45.0%
!! CATTAGCTTTCAGTGGTAGC+AGG - chr5_3:9333979-9333998 None:intergenic 45.0%
!! AAGTGATGGACCCTTGATTC+TGG + chr5_3:9334114-9334133 Msa0797250:intron 45.0%
GAATGCACCTTCCAGAATCA+AGG - chr5_3:9334128-9334147 None:intergenic 45.0%
ATAAGGGAAAAAGGGACGAG+TGG + chr5_3:9334167-9334186 Msa0797250:intron 45.0%
GACGAGTGGAGGAAAAATAC+TGG + chr5_3:9334181-9334200 Msa0797250:intron 45.0%
TGGAGGAAAAATACTGGGAG+AGG + chr5_3:9334187-9334206 Msa0797250:intron 45.0%
GAAAAATACTGGGAGAGGTG+CGG + chr5_3:9334192-9334211 Msa0797250:intron 45.0%
GTGCGGTTATGCAATTGAGT+GGG + chr5_3:9334209-9334228 Msa0797250:intron 45.0%
TGCGGTTATGCAATTGAGTG+GGG + chr5_3:9334210-9334229 Msa0797250:intron 45.0%
! CTGTCTGGCATTTTACACTC+TGG - chr5_3:9334237-9334256 None:intergenic 45.0%
!!! GGGTATTTTGGAATCATGGG+AGG + chr5_3:9334273-9334292 Msa0797250:intron 45.0%
!! CCTTACAAGCGGGTTTTGTA+AGG - chr5_3:9335082-9335101 None:intergenic 45.0%
CCTTACAAAACCCGCTTGTA+AGG + chr5_3:9335079-9335098 Msa0797250:intron 45.0%
AAAACCCGCTTGTAAGGTGA+GGG + chr5_3:9335085-9335104 Msa0797250:intron 45.0%
TCATTGTGTTGGGTGTGAAG+GGG - chr5_3:9335172-9335191 None:intergenic 45.0%
CTTCATTGTGTTGGGTGTGA+AGG - chr5_3:9335174-9335193 None:intergenic 45.0%
CTTCACACCCAACACAATGA+AGG + chr5_3:9335172-9335191 Msa0797250:intron 45.0%
! ACCCAACACAATGAAGGTGT+TGG + chr5_3:9335178-9335197 Msa0797250:intron 45.0%
CTCCAACACCTTCATTGTGT+TGG - chr5_3:9335183-9335202 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG + chr5_3:9335181-9335200 Msa0797250:intron 45.0%
GCAGCATAATTGCGGCATTT+GGG - chr5_3:9335222-9335241 None:intergenic 45.0%
AGCAGCATAATTGCGGCATT+TGG - chr5_3:9335223-9335242 None:intergenic 45.0%
AATGCCGCAATTATGCTGCT+AGG + chr5_3:9335223-9335242 Msa0797250:intron 45.0%
ATGCCGCAATTATGCTGCTA+GGG + chr5_3:9335224-9335243 Msa0797250:intron 45.0%
GCAAATTTCGGCCTTCATTG+CGG - chr5_3:9335255-9335274 None:intergenic 45.0%
CCTTATGTAGCCCATATTGG+AGG - chr5_3:9335349-9335368 None:intergenic 45.0%
! CCTCCAATATGGGCTACATA+AGG + chr5_3:9335346-9335365 Msa0797250:intron 45.0%
GGGCTACATAAGGACTAGAA+TGG + chr5_3:9335356-9335375 Msa0797250:intron 45.0%
AATAACCCAGGGAACTGCAA+TGG + chr5_3:9335574-9335593 Msa0797250:intron 45.0%
TACTACCATTGCAGTTCCCT+GGG - chr5_3:9335582-9335601 None:intergenic 45.0%
CCTTGGATGAAAAAGGGGAA+CGG - chr5_3:9335897-9335916 None:intergenic 45.0%
!! TCCCCTTTTTCATCCAAGGT+TGG + chr5_3:9335898-9335917 Msa0797250:intron 45.0%
! GTAACTTGCAACGTCGCATT+TGG - chr5_3:9336305-9336324 None:intergenic 45.0%
AATGCGACGTTGCAAGTTAC+GGG + chr5_3:9336305-9336324 Msa0797250:CDS 45.0%
TGTTCTGCGCTGTGATGTAA+CGG + chr5_3:9336579-9336598 Msa0797250:CDS 45.0%
!!! GTTAGTTTTGTGCCTCCAGA+TGG + chr5_3:9337035-9337054 Msa0797250:CDS 45.0%
CATCACCGTCACACTTTGAT+AGG + chr5_3:9337301-9337320 Msa0797250:intron 45.0%
CAGAGAACTGGGTGAAAATG+GGG - chr5_3:9337463-9337482 None:intergenic 45.0%
! TGAGCATAGCTCAGTTGGTA+GGG - chr5_3:9337598-9337617 None:intergenic 45.0%
TACCAACTGAGCTATGCTCA+CGG + chr5_3:9337598-9337617 Msa0797250:intron 45.0%
GAACCTTGTGACTCTATCCT+TGG - chr5_3:9337648-9337667 None:intergenic 45.0%
AACTCCCGTTATTAGGGAAG+CGG + chr5_3:9337869-9337888 Msa0797250:intron 45.0%
AGGATCCGCTTCCCTAATAA+CGG - chr5_3:9337877-9337896 None:intergenic 45.0%
ATTCAAAGGGAGGGAGAAAG+AGG - chr5_3:9337955-9337974 None:intergenic 45.0%
TCTTTCTCCCTCCCTTTGAA+TGG + chr5_3:9337954-9337973 Msa0797250:intron 45.0%
CTACCATCCATTCAAAGGGA+GGG - chr5_3:9337964-9337983 None:intergenic 45.0%
TCTACCATCCATTCAAAGGG+AGG - chr5_3:9337965-9337984 None:intergenic 45.0%
TCCCTTTGAATGGATGGTAG+AGG + chr5_3:9337964-9337983 Msa0797250:intron 45.0%
GGATCCTCTCATGTGATATG+AGG - chr5_3:9338001-9338020 None:intergenic 45.0%
GTGTAACTAGCTAGAGGGAA+TGG - chr5_3:9338022-9338041 None:intergenic 45.0%
CCCAAAGGACCAATTCAGAA+AGG + chr5_3:9338433-9338452 Msa0797250:intron 45.0%
AAACGATTGCGGGCGTAATT+TGG + chr5_3:9338505-9338524 Msa0797250:intron 45.0%
GCTATTACCTGATACTGTCC+TGG + chr5_3:9338535-9338554 Msa0797250:intron 45.0%
!! ATTTCCCACTTGGTGATGTC+GGG - chr5_3:9338743-9338762 None:intergenic 45.0%
GGAGGTGACTATCACTTCAA+TGG - chr5_3:9338845-9338864 None:intergenic 45.0%
TTATACCAACGCTCTCAAGG+AGG - chr5_3:9338863-9338882 None:intergenic 45.0%
TTGCCAACCATCAAGGAACT+TGG + chr5_3:9339066-9339085 Msa0797250:CDS 45.0%
TGTTCGACCAAGTTCCTTGA+TGG - chr5_3:9339076-9339095 None:intergenic 45.0%
TCAAGGAACTTGGTCGAACA+CGG + chr5_3:9339076-9339095 Msa0797250:CDS 45.0%
GGTGCAAAGATGTTTGCACT+AGG + chr5_3:9339225-9339244 Msa0797250:CDS 45.0%
!! TTTGCTGTTTGTTTCGGCAC+AGG - chr5_3:9339267-9339286 None:intergenic 45.0%
ACGAGTTTCACAGTCACATC+CGG + chr5_3:9339288-9339307 Msa0797250:CDS 45.0%
TGAAACTCCATCTGAATCGG+TGG - chr5_3:9339695-9339714 None:intergenic 45.0%
! ACCGATTCAGATGGAGTTTC+AGG + chr5_3:9339694-9339713 Msa0797250:CDS 45.0%
CTGCCAGTGCAAACTAAAAC+AGG - chr5_3:9339920-9339939 None:intergenic 45.0%
!! TTAGTTTGCACTGGCAGACA+CGG + chr5_3:9339923-9339942 Msa0797250:intron 45.0%
CACAACAACAGTTGCCCAAA+AGG - chr5_3:9340008-9340027 None:intergenic 45.0%
! CTTTTGGGCAACTGTTGTTG+TGG + chr5_3:9340006-9340025 Msa0797250:intron 45.0%
! TGAAGGTGTGGGAAAAGAGT+GGG + chr5_3:9340288-9340307 Msa0797250:intron 45.0%
GTGGGTACAACACTGTTGAA+TGG + chr5_3:9340306-9340325 Msa0797250:CDS 45.0%
GTTCGCTACATCACAAAAGC+AGG + chr5_3:9340329-9340348 Msa0797250:CDS 45.0%
! GGTTGCTGTTGTCAAACTTC+AGG + chr5_3:9340382-9340401 Msa0797250:three_prime_UTR 45.0%
TCTAGGTATCCCTTTGTTGC+AGG + chr5_3:9340457-9340476 Msa0797250:three_prime_UTR 45.0%
!! AAAAAAAAAAAAAAACTTAA+AGG + chr5_3:9338456-9338475 Msa0797250:intron 5.0%
!! AAAAAAAAAAAAAACTTAAA+GGG + chr5_3:9338457-9338476 Msa0797250:intron 5.0%
!!! TAAAATAATTTTATAATATC+AGG + chr5_3:9339004-9339023 Msa0797250:intron 5.0%
CATAAGACGCACGTGCCAAA+GGG + chr5_3:9331954-9331973 Msa0797250:five_prime_UTR 50.0%
CAGACTCCGTTATGAGTCGT+CGG - chr5_3:9332011-9332030 None:intergenic 50.0%
TTCGCTCCTCCACAGATCTA+CGG + chr5_3:9332101-9332120 Msa0797250:five_prime_UTR 50.0%
AACCTCTCCGTCGGTGAAAT+TGG + chr5_3:9332159-9332178 Msa0797250:five_prime_UTR 50.0%
TTCCAATTTCACCGACGGAG+AGG - chr5_3:9332164-9332183 None:intergenic 50.0%
ATACACTGGATCGGAGATGC+CGG + chr5_3:9332188-9332207 Msa0797250:exon 50.0%
TCTACTGGGAAAGAGGGAGA+GGG - chr5_3:9332309-9332328 None:intergenic 50.0%
AATTCCAGGGTTTCCCGAAG+AGG - chr5_3:9332580-9332599 None:intergenic 50.0%
GGGAAACCCTGGAATTTGTC+TGG + chr5_3:9332584-9332603 Msa0797250:CDS 50.0%
CCGGTAGGTACCTCAATGTT+AGG - chr5_3:9332801-9332820 None:intergenic 50.0%
ACAACCGCGATTCAGAGAGT+AGG + chr5_3:9333039-9333058 Msa0797250:CDS 50.0%
CAACCGCGATTCAGAGAGTA+GGG + chr5_3:9333040-9333059 Msa0797250:CDS 50.0%
GAACCCTACTCTCTGAATCG+CGG - chr5_3:9333046-9333065 None:intergenic 50.0%
GTTGCGGTGAAAAAGCTTCG+GGG + chr5_3:9333162-9333181 Msa0797250:CDS 50.0%
AAAAAGCTTCGGGGTGGTAG+TGG + chr5_3:9333171-9333190 Msa0797250:CDS 50.0%
ACCTGTCCTGTGAAGCAGAT+TGG + chr5_3:9333460-9333479 Msa0797250:CDS 50.0%
ACCAATCTGCTTCACAGGAC+AGG - chr5_3:9333464-9333483 None:intergenic 50.0%
TGTCCTGTGAAGCAGATTGG+TGG + chr5_3:9333463-9333482 Msa0797250:CDS 50.0%
CATCCACCAATCTGCTTCAC+AGG - chr5_3:9333469-9333488 None:intergenic 50.0%
!!! TTTTGGTGGCGCTTTTGACG+AGG + chr5_3:9333842-9333861 Msa0797250:CDS 50.0%
GATGGACCCTTGATTCTGGA+AGG + chr5_3:9334118-9334137 Msa0797250:intron 50.0%
GGTGCGGTTATGCAATTGAG+TGG + chr5_3:9334208-9334227 Msa0797250:intron 50.0%
GCGGTTATGCAATTGAGTGG+GGG + chr5_3:9334211-9334230 Msa0797250:intron 50.0%
CAAAACCCGCTTGTAAGGTG+AGG + chr5_3:9335084-9335103 Msa0797250:intron 50.0%
TGCCGCAATTATGCTGCTAG+GGG + chr5_3:9335225-9335244 Msa0797250:intron 50.0%
CACCCCTAGCAGCATAATTG+CGG - chr5_3:9335230-9335249 None:intergenic 50.0%
GCAATTATGCTGCTAGGGGT+GGG + chr5_3:9335229-9335248 Msa0797250:intron 50.0%
CTACTACCATTGCAGTTCCC+TGG - chr5_3:9335583-9335602 None:intergenic 50.0%
!! CCGTTCCCCTTTTTCATCCA+AGG + chr5_3:9335894-9335913 Msa0797250:CDS 50.0%
AAGCACGTGCAAACCAACCT+TGG - chr5_3:9335914-9335933 None:intergenic 50.0%
GTGCAATGGTTGGGAGAAAC+AGG + chr5_3:9336262-9336281 Msa0797250:intron 50.0%
! TGCAACGTCGCATTTGGAAC+AGG - chr5_3:9336299-9336318 None:intergenic 50.0%
! TTGCAAGTTACGGGTGCTGT+TGG + chr5_3:9336314-9336333 Msa0797250:CDS 50.0%
!! AAGTTACGGGTGCTGTTGGT+TGG + chr5_3:9336318-9336337 Msa0797250:CDS 50.0%
GTTCTGCGCTGTGATGTAAC+GGG + chr5_3:9336580-9336599 Msa0797250:CDS 50.0%
TTCTGCGCTGTGATGTAACG+GGG + chr5_3:9336581-9336600 Msa0797250:CDS 50.0%
GTCAACAGAAGCTCGGATAG+TGG - chr5_3:9337239-9337258 None:intergenic 50.0%
! AGGTGAATACATGGGGTGTC+CGG + chr5_3:9337534-9337553 Msa0797250:intron 50.0%
GTGAGCATAGCTCAGTTGGT+AGG - chr5_3:9337599-9337618 None:intergenic 50.0%
ACCAACTGAGCTATGCTCAC+GGG + chr5_3:9337599-9337618 Msa0797250:intron 50.0%
! GCGTGTCATCGACTGCAAAT+TGG + chr5_3:9337801-9337820 Msa0797250:intron 50.0%
GGATCCGCTTCCCTAATAAC+GGG - chr5_3:9337876-9337895 None:intergenic 50.0%
GGGAGGGAGAAAGAGGATTA+AGG - chr5_3:9337948-9337967 None:intergenic 50.0%
TCTCCCTCCCTTTGAATGGA+TGG + chr5_3:9337958-9337977 Msa0797250:intron 50.0%
GGACCCTCATATCACATGAG+AGG + chr5_3:9337994-9338013 Msa0797250:intron 50.0%
TCTGGGTTTATCCGGCCAAA+TGG + chr5_3:9338324-9338343 Msa0797250:intron 50.0%
AAAACTTAAAGGGCCGACCC+AGG + chr5_3:9338467-9338486 Msa0797250:intron 50.0%
GTTTGACCCATTTCCTGGGT+CGG - chr5_3:9338483-9338502 None:intergenic 50.0%
!! ACTTGGTGATGTCGGGTACA+TGG - chr5_3:9338736-9338755 None:intergenic 50.0%
ATGTACCCGACATCACCAAG+TGG + chr5_3:9338735-9338754 Msa0797250:intron 50.0%
TGTACCCGACATCACCAAGT+GGG + chr5_3:9338736-9338755 Msa0797250:intron 50.0%
! CGACCAAGTTCCTTGATGGT+TGG - chr5_3:9339072-9339091 None:intergenic 50.0%
! AAAGTTGGCTCAGTTTGCCC+AGG - chr5_3:9339617-9339636 None:intergenic 50.0%
!! GACTAGACCACCGATTCAGA+TGG + chr5_3:9339685-9339704 Msa0797250:intron 50.0%
GGTTATTGTTCCTCCACCGT+AGG + chr5_3:9340027-9340046 Msa0797250:intron 50.0%
TTTGGAGAGATGTGCCATGC+AGG - chr5_3:9340083-9340102 None:intergenic 50.0%
GTTCCCATGTTCACAGCATC+TGG + chr5_3:9340161-9340180 Msa0797250:CDS 50.0%
! CTGAAGGTGTGGGAAAAGAG+TGG + chr5_3:9340287-9340306 Msa0797250:intron 50.0%
GCATAAGACGCACGTGCCAA+AGG + chr5_3:9331953-9331972 Msa0797250:five_prime_UTR 55.0%
GAACGAAACGACGTCGTCGA+CGG - chr5_3:9332081-9332100 None:intergenic 55.0%
GTTTCGCCGTAGATCTGTGG+AGG - chr5_3:9332110-9332129 None:intergenic 55.0%
GTGGTTTCGCCGTAGATCTG+TGG - chr5_3:9332113-9332132 None:intergenic 55.0%
TAAACAGCGGAAGCAGCCAC+CGG - chr5_3:9332210-9332229 None:intergenic 55.0%
TGATGAGAACGTCACCACGG+AGG - chr5_3:9332242-9332261 None:intergenic 55.0%
CGTCTCTATCGCGACGATGT+CGG + chr5_3:9332264-9332283 Msa0797250:CDS 55.0%
GTCTCTATCGCGACGATGTC+GGG + chr5_3:9332265-9332284 Msa0797250:CDS 55.0%
CTACTGGGAAAGAGGGAGAG+GGG - chr5_3:9332308-9332327 None:intergenic 55.0%
CTCTACTGGGAAAGAGGGAG+AGG - chr5_3:9332310-9332329 None:intergenic 55.0%
ATTGCCTCTTCGGGAAACCC+TGG + chr5_3:9332573-9332592 Msa0797250:CDS 55.0%
! GTCGGGTCTAATGGGTAACC+CGG + chr5_3:9332842-9332861 Msa0797250:intron 55.0%
! TCGGGTCTAATGGGTAACCC+GGG + chr5_3:9332843-9332862 Msa0797250:intron 55.0%
AGGGAAAAAGGGACGAGTGG+AGG + chr5_3:9334170-9334189 Msa0797250:intron 55.0%
TGTGTTGGGTGTGAAGGGGT+CGG - chr5_3:9335168-9335187 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG + chr5_3:9335193-9335212 Msa0797250:intron 55.0%
CGCAATTATGCTGCTAGGGG+TGG + chr5_3:9335228-9335247 Msa0797250:intron 55.0%
GACATGGTCGCAGATGCGAT+AGG + chr5_3:9335955-9335974 Msa0797250:intron 55.0%
!! TTACGGGTGCTGTTGGTTGG+CGG + chr5_3:9336321-9336340 Msa0797250:CDS 55.0%
! TGGTCAAGTAGGCTGGCTAG+TGG + chr5_3:9337494-9337513 Msa0797250:intron 55.0%
! GGTGAATACATGGGGTGTCC+GGG + chr5_3:9337535-9337554 Msa0797250:intron 55.0%
! GTGAATACATGGGGTGTCCG+GGG + chr5_3:9337536-9337555 Msa0797250:intron 55.0%
CCAACTGAGCTATGCTCACG+GGG + chr5_3:9337600-9337619 Msa0797250:intron 55.0%
CAGTCGATGACACGCTGCTT+TGG - chr5_3:9337796-9337815 None:intergenic 55.0%
TAAAGGGCCGACCCAGGAAA+TGG + chr5_3:9338473-9338492 Msa0797250:intron 55.0%
AAAGGGCCGACCCAGGAAAT+GGG + chr5_3:9338474-9338493 Msa0797250:intron 55.0%
! AGTCACCTCCTTGAGAGCGT+TGG + chr5_3:9338855-9338874 Msa0797250:intron 55.0%
GGAACTTGGTCGAACACGGA+TGG + chr5_3:9339080-9339099 Msa0797250:CDS 55.0%
AAGACGCACGTGCCAAAGGG+AGG + chr5_3:9331957-9331976 Msa0797250:five_prime_UTR 60.0%
ATTAGGAGGGGGTTCGGGTC+AGG + chr5_3:9333107-9333126 Msa0797250:CDS 60.0%
TTAGGAGGGGGTTCGGGTCA+GGG + chr5_3:9333108-9333127 Msa0797250:CDS 60.0%
GCGGTGAAAAAGCTTCGGGG+TGG + chr5_3:9333165-9333184 Msa0797250:CDS 60.0%
GCAGCCCTCACCTTACAAGC+GGG - chr5_3:9335092-9335111 None:intergenic 60.0%
GGCAGCCCTCACCTTACAAG+CGG - chr5_3:9335093-9335112 None:intergenic 60.0%
! GCTGTTGGTTGGCGGAGAGA+AGG + chr5_3:9336329-9336348 Msa0797250:CDS 60.0%
CCCCGTGAGCATAGCTCAGT+TGG - chr5_3:9337603-9337622 None:intergenic 60.0%
GAAACATGGGGGGGGTTGAG+AGG - chr5_3:9337897-9337916 None:intergenic 60.0%
CTTCCGGCGAACCTCTCCGT+CGG + chr5_3:9332150-9332169 Msa0797250:five_prime_UTR 65.0%
TCACCGACGGAGAGGTTCGC+CGG - chr5_3:9332156-9332175 None:intergenic 65.0%
CACTGGATCGGAGATGCCGG+TGG + chr5_3:9332191-9332210 Msa0797250:exon 65.0%
GGAAAGAGGGAGAGGGGAGG+AGG - chr5_3:9332302-9332321 None:intergenic 65.0%
CTGGGAAAGAGGGAGAGGGG+AGG - chr5_3:9332305-9332324 None:intergenic 65.0%
CTAGGGGTGGGCCGCAATGA+AGG + chr5_3:9335241-9335260 Msa0797250:intron 65.0%
AGGGGTCGGGGTTCGAACCC+CGG - chr5_3:9337556-9337575 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 9331945 9340806 9331945 ID=Msa0797250;Name=Msa0797250
chr5_3 mRNA 9331945 9340806 9331945 ID=Msa0797250-mRNA-1;Parent=Msa0797250;Name=Msa0797250-mRNA-1;_AED=0.20;_eAED=0.20;_QI=259|0.73|0.81|0.87|0.93|0.87|16|359|501
chr5_3 exon 9331945 9332286 9331945 ID=Msa0797250-mRNA-1:exon:4051;Parent=Msa0797250-mRNA-1
chr5_3 exon 9332524 9332605 9332524 ID=Msa0797250-mRNA-1:exon:4052;Parent=Msa0797250-mRNA-1
chr5_3 exon 9333030 9333226 9333030 ID=Msa0797250-mRNA-1:exon:4053;Parent=Msa0797250-mRNA-1
chr5_3 exon 9333405 9333582 9333405 ID=Msa0797250-mRNA-1:exon:4054;Parent=Msa0797250-mRNA-1
chr5_3 exon 9333819 9333909 9333819 ID=Msa0797250-mRNA-1:exon:4055;Parent=Msa0797250-mRNA-1
chr5_3 exon 9335821 9335915 9335821 ID=Msa0797250-mRNA-1:exon:4056;Parent=Msa0797250-mRNA-1
chr5_3 exon 9336284 9336373 9336284 ID=Msa0797250-mRNA-1:exon:4057;Parent=Msa0797250-mRNA-1
chr5_3 exon 9336452 9336500 9336452 ID=Msa0797250-mRNA-1:exon:4058;Parent=Msa0797250-mRNA-1
chr5_3 exon 9336575 9336713 9336575 ID=Msa0797250-mRNA-1:exon:4059;Parent=Msa0797250-mRNA-1
chr5_3 exon 9336959 9337075 9336959 ID=Msa0797250-mRNA-1:exon:4060;Parent=Msa0797250-mRNA-1
chr5_3 exon 9339026 9339116 9339026 ID=Msa0797250-mRNA-1:exon:4061;Parent=Msa0797250-mRNA-1
chr5_3 exon 9339210 9339352 9339210 ID=Msa0797250-mRNA-1:exon:4062;Parent=Msa0797250-mRNA-1
chr5_3 exon 9339691 9339715 9339691 ID=Msa0797250-mRNA-1:exon:4063;Parent=Msa0797250-mRNA-1
chr5_3 exon 9340161 9340205 9340161 ID=Msa0797250-mRNA-1:exon:4064;Parent=Msa0797250-mRNA-1
chr5_3 exon 9340293 9340658 9340293 ID=Msa0797250-mRNA-1:exon:4065;Parent=Msa0797250-mRNA-1
chr5_3 exon 9340733 9340806 9340733 ID=Msa0797250-mRNA-1:exon:4066;Parent=Msa0797250-mRNA-1
chr5_3 five_prime_UTR 9331945 9332203 9331945 ID=Msa0797250-mRNA-1:five_prime_utr;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9332204 9332286 9332204 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9332524 9332605 9332524 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9333030 9333226 9333030 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9333405 9333582 9333405 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9333819 9333909 9333819 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9335821 9335915 9335821 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9336284 9336373 9336284 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9336452 9336500 9336452 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9336575 9336713 9336575 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9336959 9337075 9336959 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9339026 9339116 9339026 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9339210 9339352 9339210 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9339691 9339715 9339691 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9340161 9340205 9340161 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 CDS 9340293 9340373 9340293 ID=Msa0797250-mRNA-1:cds;Parent=Msa0797250-mRNA-1
chr5_3 three_prime_UTR 9340374 9340658 9340374 ID=Msa0797250-mRNA-1:three_prime_utr;Parent=Msa0797250-mRNA-1
chr5_3 three_prime_UTR 9340733 9340806 9340733 ID=Msa0797250-mRNA-1:three_prime_utr;Parent=Msa0797250-mRNA-1
Gene Sequence

>Msa0797250

ATGCCGGTGGCTGCTTCCGCTGTTTACTTCTTGAACCTCCGTGGTGACGTTCTCATCAATCGTCTCTATCGCGACGATGTCGGATATGTAGAACATTTTAGTGTAATGCAGCTAGGACTAGTTTATAATATTATTGCCTCTTCGGGAAACCCTGGAATTTGTCTGGCTTTTATGACAACCGCGATTCAGAGAGTAGGGTTCAGTGAAGAAGATATAATTCCTTTTTTAACAAATGAGAATTTATTAGGAGGGGGTTCGGGTCAGGGTTATAAAGTGAAGGTGAAAATGGGTCACATAGTTGCGGTGAAAAAGCTTCGGGGTGGTAGTGGAACACAACAACCTGATACAGAATCTGTGTTTGAGGGAAACATGGTTGATGCTTTTCGGACGCATATAATGCAAACGAAAGAACTTGGTACCTGTCCTGTGAAGCAGATTGGTGGATGCTCTTTCTTTTACATGAGGATCAGCAATGTCTACATTGTGATTGTTGTCAGTACCAATGCTAATGTAGCTTGCGCTTTCAAGTTCGTTGTAGAGGCTGTTGCACTATTCAAATCATATTTTGGTGGCGCTTTTGACGAGGATGCAATTCGCAACAATTTTGTACTCATTTACGAGCTTCTAGATGAAATCATGGACTTTGGTTATCCACAAAATCTTTCACCGGAGATCTTAAAGCTTTATATTACTCAAGAAGGAGTCCGTTCCCCTTTTTCATCCAAGGCATCAGAGAGACCTGTTCCAAATGCGACGTTGCAAGTTACGGGTGCTGTTGGTTGGCGGAGAGAAGGCCTTGTATACAAAAAGAACGAGGTGTTCCTAGATATTGTGGAGAGTGTGAATCTTCTTATGTCGTCAAAAGGCGTTGTTCTGCGCTGTGATGTAACGGGGAAGATTCTTATGAAGTGCTTTCTATCTGGAATGCCTGATTTGAAGTTGGGTTTGAATGATAAGATTGGCCTTGAGAAAGAGTCACAACTTAAATCACGCCCTACTAAAAGTGGCAAAACTATTGAGCTTGATGACGTCACTTTCCATCAATGTGTAAATTTGACGAGGTTCAACTCGGAGAAGACTGTTAGTTTTGTGCCTCCAGATGGTGAATTTGAACTGATGAAGTATCGTATCACTGAGGGTGTTAATCTTCCCTTCAAAGTATTGCCAACCATCAAGGAACTTGGTCGAACACGGATGGAAGTAAATGTTAAGGTAAAGAGTGTCTTTGGTGCAAAGATGTTTGCACTAGGGGTTGTTGTCAAAATTCCTGTGCCGAAACAAACAGCAAAAACGAGTTTCACAGTCACATCCGGTCGAGCAAAATATAATGCAGCTATTGATTGTTTAGTTTGGAAACCACCGATTCAGATGGAGTTTCAGGTTCCCATGTTCACAGCATCTGGTTTACGTGTTCGTTTTCTTAAGGTGTGGGAAAAGAGTGGGTACAACACTGTTGAATGGGTTCGCTACATCACAAAAGCAGGATCATACGAGATTAGGTGCTAG

Protein sequence

>Msa0797250

MPVAASAVYFLNLRGDVLINRLYRDDVGYVEHFSVMQLGLVYNIIASSGNPGICLAFMTTAIQRVGFSEEDIIPFLTNENLLGGGSGQGYKVKVKMGHIVAVKKLRGGSGTQQPDTESVFEGNMVDAFRTHIMQTKELGTCPVKQIGGCSFFYMRISNVYIVIVVSTNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKASERPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFKVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTSFTVTSGRAKYNAAIDCLVWKPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITKAGSYEIRC*