AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1064500


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1064500 MtrunA17_Chr4g0060511 80.160 499 96 1 5 500 3 501 0.0 819
Msa1064500 MtrunA17_Chr7g0243861 79.276 497 103 0 4 500 5 501 0.0 812
Msa1064500 MtrunA17_Chr7g0243951 77.666 497 110 1 4 500 2 497 0.0 808
Msa1064500 MtrunA17_Chr7g0243771 78.189 486 102 1 10 495 3 484 0.0 805
Msa1064500 MtrunA17_Chr7g0243681 77.666 497 104 2 4 499 2 492 0.0 804
Msa1064500 MtrunA17_Chr7g0243631 77.645 501 110 2 1 500 1 500 0.0 801
Msa1064500 MtrunA17_Chr7g0243801 76.970 495 104 2 1 495 1 485 0.0 801
Msa1064500 MtrunA17_Chr7g0243931 76.861 497 115 0 4 500 8 504 0.0 801
Msa1064500 MtrunA17_Chr7g0235051 75.855 497 89 2 4 500 2 467 0.0 737
Msa1064500 MtrunA17_Chr7g0243761 74.849 497 95 2 4 500 2 468 0.0 729
Msa1064500 MtrunA17_Chr7g0243851 70.221 497 106 1 4 500 2 456 0.0 711
Msa1064500 MtrunA17_Chr7g0243871 70.909 495 130 2 1 495 1 481 0.0 706
Msa1064500 MtrunA17_Chr7g0243781 68.600 500 142 3 1 498 1 487 0.0 678
Msa1064500 MtrunA17_Chr5g0401851 52.049 488 232 2 7 493 4 490 0.0 521
Msa1064500 MtrunA17_Chr8g0355221 51.844 488 231 4 7 493 9 493 0.0 519
Msa1064500 MtrunA17_Chr7g0243811 65.196 408 128 2 25 432 1 394 0.0 516
Msa1064500 MtrunA17_Chr1g0165701 51.411 496 228 6 7 498 9 495 5.03e-176 504
Msa1064500 MtrunA17_Chr5g0416741 51.837 490 232 4 1 490 2 487 6.25e-175 501
Msa1064500 MtrunA17_Chr7g0243611 76.206 311 59 2 128 438 1 296 7.79e-173 488
Msa1064500 MtrunA17_Chr6g0463891 50.701 499 238 6 1 496 1 494 8.61e-169 485
Msa1064500 MtrunA17_Chr5g0416821 47.379 496 242 6 1 493 1 480 2.11e-157 456
Msa1064500 MtrunA17_Chr7g0243711 78.988 257 53 1 244 500 75 330 2.14e-143 414
Msa1064500 MtrunA17_Chr7g0243711 73.786 103 20 2 4 100 2 103 2.41e-40 148
Msa1064500 MtrunA17_Chr7g0243921 86.574 216 24 1 1 216 28 238 2.46e-135 390
Msa1064500 MtrunA17_Chr7g0243911 87.736 212 26 0 260 471 4 215 1.39e-133 385
Msa1064500 MtrunA17_Chr4g0044511 42.650 483 262 7 9 488 36 506 1.45e-131 391
Msa1064500 MtrunA17_Chr8g0366391 43.564 505 262 10 1 498 1 489 7.20e-130 386
Msa1064500 MtrunA17_Chr4g0044501 44.057 488 249 11 10 489 7 478 1.87e-126 377
Msa1064500 MtrunA17_Chr4g0066151 42.424 495 247 13 12 493 17 486 4.15e-117 353
Msa1064500 MtrunA17_Chr4g0044521 42.505 487 250 8 10 489 6 469 1.35e-116 351
Msa1064500 MtrunA17_Chr4g0066201 41.434 502 243 13 9 493 14 481 3.19e-114 346
Msa1064500 MtrunA17_Chr4g0066261 40.486 494 271 8 12 495 10 490 8.00e-114 345
Msa1064500 MtrunA17_Chr4g0066221 40.546 513 263 14 1 495 1 489 6.43e-113 342
Msa1064500 MtrunA17_Chr4g0014061 38.763 485 285 6 12 495 8 481 6.65e-113 342
Msa1064500 MtrunA17_Chr5g0419771 40.726 496 271 10 8 490 31 516 8.38e-113 343
Msa1064500 MtrunA17_Chr7g0275681 39.876 484 274 7 9 486 8 480 1.02e-111 339
Msa1064500 MtrunA17_Chr4g0066131 39.608 510 266 10 1 495 1 483 1.64e-111 339
Msa1064500 MtrunA17_Chr4g0066281 41.273 487 253 10 16 495 15 475 6.29e-110 334
Msa1064500 MtrunA17_Chr1g0179901 37.897 504 289 11 3 493 8 500 2.76e-109 333
Msa1064500 MtrunA17_Chr7g0265151 39.165 503 269 14 1 486 1 483 7.40e-109 332
Msa1064500 MtrunA17_Chr8g0350881 39.757 493 274 7 12 495 11 489 2.45e-107 328
Msa1064500 MtrunA17_Chr4g0066171 39.802 505 258 13 5 495 13 485 5.31e-107 327
Msa1064500 MtrunA17_Chr7g0265141 38.800 500 275 11 1 485 1 484 8.17e-107 327
Msa1064500 MtrunA17_Chr8g0374971 39.474 494 270 7 12 493 11 487 1.34e-106 326
Msa1064500 MtrunA17_Chr8g0374901 39.192 495 272 9 11 495 12 487 4.00e-106 325
Msa1064500 MtrunA17_Chr4g0011051 37.602 492 288 9 11 490 7 491 5.56e-105 322
Msa1064500 MtrunA17_Chr7g0265041 39.431 492 280 11 6 486 4 488 5.60e-105 322
Msa1064500 MtrunA17_Chr5g0419761 38.105 496 293 10 7 494 4 493 2.53e-103 318
Msa1064500 MtrunA17_Chr7g0265111 39.078 499 283 13 10 496 36 525 4.77e-103 319
Msa1064500 MtrunA17_Chr7g0265101 37.022 497 291 9 11 495 7 493 3.19e-102 315
Msa1064500 MtrunA17_Chr8g0374931 39.147 516 263 15 1 493 1 488 2.92e-100 310
Msa1064500 MtrunA17_Chr6g0463861 38.211 492 267 12 12 490 10 477 1.81e-99 308
Msa1064500 MtrunA17_Chr7g0265051 36.768 495 293 9 11 495 7 491 3.77e-99 307
Msa1064500 MtrunA17_Chr8g0374941 39.757 493 270 8 11 493 949 1424 6.61e-99 325
Msa1064500 MtrunA17_Chr8g0374941 38.797 482 268 9 1 472 1 465 3.32e-93 309
Msa1064500 MtrunA17_Chr8g0374941 38.413 479 266 8 1 468 466 926 2.06e-89 298
Msa1064500 MtrunA17_Chr2g0294921 38.767 503 265 13 12 494 159 638 4.64e-97 306
Msa1064500 MtrunA17_Chr5g0428081 38.400 500 267 10 12 493 10 486 1.04e-95 298
Msa1064500 MtrunA17_Chr2g0294931 38.142 506 266 13 12 495 10 490 3.82e-95 297
Msa1064500 MtrunA17_Chr7g0218311 38.400 500 270 9 12 495 15 492 3.84e-95 297
Msa1064500 MtrunA17_Chr6g0463851 37.426 505 276 12 1 487 1 483 6.15e-95 296
Msa1064500 MtrunA17_Chr4g0044481 41.320 409 206 6 13 419 27 403 6.32e-95 294
Msa1064500 MtrunA17_Chr5g0410941 37.525 509 277 11 2 493 12 496 1.02e-93 293
Msa1064500 MtrunA17_Chr7g0231631 50.542 277 112 5 218 490 8 263 1.04e-80 252
Msa1064500 MtrunA17_Chr2g0294941 36.979 384 195 14 113 471 3 364 1.42e-63 211
Msa1064500 MtrunA17_Chr6g0454341 29.688 512 288 16 8 486 5 477 1.19e-61 209
Msa1064500 MtrunA17_Chr5g0440421 29.102 512 316 13 5 489 2 493 2.98e-61 208
Msa1064500 MtrunA17_Chr6g0464861 29.703 505 280 17 4 486 2 453 4.18e-60 204
Msa1064500 MtrunA17_Chr3g0078841 29.331 508 295 13 8 486 5 477 7.81e-60 204
Msa1064500 MtrunA17_Chr7g0250001 29.175 497 280 16 10 486 3 447 1.33e-58 200
Msa1064500 MtrunA17_Chr1g0207971 27.510 498 307 17 8 492 3 459 2.80e-58 199
Msa1064500 MtrunA17_Chr7g0243721 72.059 136 37 1 188 323 1 135 3.83e-58 189
Msa1064500 MtrunA17_Chr6g0464881 28.770 504 294 17 6 491 3 459 2.14e-57 197
Msa1064500 MtrunA17_Chr6g0453951 28.070 513 295 16 9 486 53 526 2.26e-56 196
Msa1064500 MtrunA17_Chr8g0336331 28.880 509 295 13 8 486 5 476 2.55e-56 195
Msa1064500 MtrunA17_Chr6g0464841 28.715 498 295 16 4 486 2 454 2.87e-56 194
Msa1064500 MtrunA17_Chr6g0454261 28.974 497 303 13 13 486 10 479 6.31e-56 194
Msa1064500 MtrunA17_Chr8g0361411 29.735 491 295 13 11 490 6 457 6.55e-56 193
Msa1064500 MtrunA17_Chr2g0278711 28.373 504 301 13 13 490 11 480 1.17e-55 193
Msa1064500 MtrunA17_Chr6g0454331 27.789 511 303 14 8 486 2 478 1.42e-55 193
Msa1064500 MtrunA17_Chr6g0454361 29.020 510 286 18 13 486 11 480 1.65e-55 192
Msa1064500 MtrunA17_Chr5g0414331 29.058 499 295 16 1 486 1 453 1.93e-55 192
Msa1064500 MtrunA17_Chr6g0454301 27.756 508 303 11 8 486 258 730 2.15e-55 197
Msa1064500 MtrunA17_Chr6g0454301 33.884 242 140 5 245 485 6 228 1.24e-34 138
Msa1064500 MtrunA17_Chr6g0454291 29.240 513 291 16 8 486 2 476 3.17e-55 192
Msa1064500 MtrunA17_Chr6g0454191 28.180 511 306 15 5 486 2 480 3.17e-55 192
Msa1064500 MtrunA17_Chr6g0464871 29.116 498 297 17 2 486 12 466 7.36e-55 191
Msa1064500 MtrunA17_Chr6g0454321 28.000 500 292 13 8 476 5 467 1.29e-54 194
Msa1064500 MtrunA17_Chr6g0454401 29.070 516 295 17 5 486 2 480 1.44e-54 190
Msa1064500 MtrunA17_Chr7g0275511 30.512 508 288 17 1 482 3 471 2.38e-54 189
Msa1064500 MtrunA17_Chr7g0231651 46.734 199 104 2 1 198 3 200 5.11e-54 181
Msa1064500 MtrunA17_Chr7g0217881 29.541 501 277 17 13 486 10 461 1.46e-53 187
Msa1064500 MtrunA17_Chr5g0414321 28.313 498 294 15 9 491 7 456 2.72e-53 186
Msa1064500 MtrunA17_Chr6g0454181 27.811 507 296 16 13 486 10 479 3.92e-53 186
Msa1064500 MtrunA17_Chr3g0098111 27.823 496 315 16 8 488 4 471 4.34e-53 186
Msa1064500 MtrunA17_Chr8g0377921 31.020 490 286 18 14 484 5 461 5.27e-53 186
Msa1064500 MtrunA17_Chr7g0232411 30.219 503 287 19 12 489 5 468 6.98e-53 185
Msa1064500 MtrunA17_Chr7g0232391 30.020 503 280 19 12 485 5 464 7.98e-53 185
Msa1064500 MtrunA17_Chr6g0464921 28.715 498 300 16 1 486 1 455 8.19e-53 185
Msa1064500 MtrunA17_Chr5g0426431 28.942 501 304 16 8 486 7 477 1.44e-52 185
Msa1064500 MtrunA17_Chr6g0454201 28.119 505 297 14 13 486 11 480 1.84e-52 184
Msa1064500 MtrunA17_Chr6g0454211 27.432 514 305 14 5 486 289 766 9.56e-52 187
Msa1064500 MtrunA17_Chr6g0454211 26.909 275 146 9 131 390 2 236 1.04e-19 92.8
Msa1064500 MtrunA17_Chr4g0050341 29.234 496 307 13 13 487 19 491 1.25e-51 182
Msa1064500 MtrunA17_Chr7g0249931 28.862 492 294 17 8 486 35 483 1.58e-51 182
Msa1064500 MtrunA17_Chr7g0249981 28.041 485 301 15 10 486 22 466 3.36e-51 181
Msa1064500 MtrunA17_Chr8g0359821 28.252 492 311 15 13 486 10 477 4.37e-51 181
Msa1064500 MtrunA17_Chr2g0307961 29.000 500 309 15 1 486 1 468 5.93e-51 180
Msa1064500 MtrunA17_Chr3g0092641 29.563 504 297 19 8 486 7 477 9.57e-51 180
Msa1064500 MtrunA17_Chr3g0121991 27.202 511 322 17 2 491 69 550 1.75e-50 181
Msa1064500 MtrunA17_Chr6g0454151 27.778 504 298 15 13 486 10 477 5.09e-50 178
Msa1064500 MtrunA17_Chr6g0454141 26.190 504 308 12 13 486 10 479 6.11e-50 178
Msa1064500 MtrunA17_Chr1g0207861 27.435 503 308 19 8 488 3 470 8.21e-50 177
Msa1064500 MtrunA17_Chr8g0380531 28.257 499 298 14 6 487 3 458 1.47e-49 176
Msa1064500 MtrunA17_Chr8g0347281 29.921 508 290 19 1 482 1 468 3.69e-49 176
Msa1064500 MtrunA17_Chr1g0161351 26.511 513 315 15 1 490 28 501 3.75e-49 176
Msa1064500 MtrunA17_Chr2g0329111 27.292 480 301 15 14 472 7 459 5.74e-49 175
Msa1064500 MtrunA17_Chr3g0118711 27.432 514 311 15 1 486 1 480 6.35e-49 175
Msa1064500 MtrunA17_Chr1g0207951 27.160 486 311 16 12 486 655 1108 6.86e-49 181
Msa1064500 MtrunA17_Chr1g0207951 26.735 490 304 18 12 487 123 571 1.34e-46 174
Msa1064500 MtrunA17_Chr6g0454351 27.059 510 291 16 7 486 6 464 9.86e-49 174
Msa1064500 MtrunA17_Chr3g0118671 27.680 513 295 17 9 486 2 473 1.82e-48 174
Msa1064500 MtrunA17_Chr1g0207981 25.657 495 336 11 1 486 1 472 1.87e-48 174
Msa1064500 MtrunA17_Chr1g0173121 28.850 513 287 21 1 486 1 462 3.28e-48 172
Msa1064500 MtrunA17_Chr1g0207831 25.820 488 324 15 10 487 5 464 6.84e-48 172
Msa1064500 MtrunA17_Chr6g0453961 27.326 516 288 17 13 486 19 489 7.70e-48 172
Msa1064500 MtrunA17_Chr3g0118691 27.255 521 299 16 3 486 5 482 8.04e-48 172
Msa1064500 MtrunA17_Chr6g0454271 34.899 298 170 7 193 486 9 286 1.87e-47 166
Msa1064500 MtrunA17_Chr6g0486251 28.687 495 294 14 10 482 3 460 1.87e-47 171
Msa1064500 MtrunA17_Chr6g0486201 28.687 495 294 14 10 482 3 460 1.87e-47 171
Msa1064500 MtrunA17_Chr6g0452771 27.579 504 301 15 13 486 10 479 1.91e-47 171
Msa1064500 MtrunA17_Chr3g0122001 28.487 509 294 18 13 489 6 476 2.17e-47 176
Msa1064500 MtrunA17_Chr3g0122001 28.773 497 301 17 13 486 486 952 7.93e-47 174
Msa1064500 MtrunA17_Chr5g0420801 27.767 497 307 16 8 489 2 461 2.92e-47 170
Msa1064500 MtrunA17_Chr8g0382021 28.106 491 284 18 18 483 39 485 3.84e-47 170
Msa1064500 MtrunA17_Chr6g0459311 28.866 485 298 12 14 482 14 467 5.47e-47 169
Msa1064500 MtrunA17_Chr5g0448521 28.106 491 308 16 11 484 3 465 6.77e-47 169
Msa1064500 MtrunA17_Chr8g0370941 27.647 510 296 16 13 482 8 484 1.16e-46 169
Msa1064500 MtrunA17_Chr5g0423981 27.912 498 272 18 13 486 10 444 1.89e-46 167
Msa1064500 MtrunA17_Chr6g0449931 29.084 502 294 14 13 489 6 470 2.06e-46 168
Msa1064500 MtrunA17_Chr3g0118771 27.778 504 298 15 13 486 21 488 2.99e-46 168
Msa1064500 MtrunA17_Chr8g0347271 29.880 502 295 19 1 482 5 469 4.04e-46 167
Msa1064500 MtrunA17_Chr6g0462551 28.370 497 291 15 14 484 5 462 5.02e-46 167
Msa1064500 MtrunA17_Chr4g0053501 26.899 487 312 15 12 486 10 464 8.28e-46 167
Msa1064500 MtrunA17_Chr7g0218811 28.482 481 287 16 13 484 15 447 1.09e-45 166
Msa1064500 MtrunA17_Chr8g0365811 27.767 497 308 19 12 488 494 959 1.19e-45 171
Msa1064500 MtrunA17_Chr8g0365811 27.505 469 283 17 8 450 4 441 5.89e-40 154
Msa1064500 MtrunA17_Chr8g0361371 28.457 499 289 16 14 483 8 467 1.90e-45 166
Msa1064500 MtrunA17_Chr3g0118701 26.367 512 315 14 3 486 5 482 2.18e-45 166
Msa1064500 MtrunA17_Chr3g0112771 27.811 507 301 16 1 492 1 457 2.50e-45 165
Msa1064500 MtrunA17_Chr8g0335161 27.000 500 300 15 9 482 2 462 3.45e-45 164
Msa1064500 MtrunA17_Chr6g0454121 26.547 501 309 14 13 486 10 478 7.30e-45 164
Msa1064500 MtrunA17_Chr8g0336691 28.488 516 304 16 1 490 1 477 7.75e-45 169
Msa1064500 MtrunA17_Chr8g0336691 30.445 427 237 12 83 482 982 1375 2.32e-42 162
Msa1064500 MtrunA17_Chr8g0336691 29.697 495 275 18 12 490 479 916 6.78e-37 145
Msa1064500 MtrunA17_Chr7g0232331 28.827 503 293 21 13 489 6 469 1.07e-44 163
Msa1064500 MtrunA17_Chr8g0339631 30.345 435 255 14 83 495 69 477 1.27e-44 163
Msa1064500 MtrunA17_Chr5g0442521 28.571 497 300 18 14 484 6 473 1.53e-44 163
Msa1064500 MtrunA17_Chr8g0369341 28.487 509 298 17 8 489 2 471 1.68e-44 163
Msa1064500 MtrunA17_Chr1g0159551 28.346 508 293 20 1 486 1 459 1.71e-44 162
Msa1064500 MtrunA17_Chr6g0454131 27.016 496 313 14 13 486 10 478 3.85e-44 162
Msa1064500 MtrunA17_Chr7g0218831 28.423 482 283 17 13 483 6 436 5.28e-44 160
Msa1064500 MtrunA17_Chr7g0232341 28.544 515 283 21 13 491 6 471 9.43e-44 160
Msa1064500 MtrunA17_Chr7g0218821 27.347 490 298 14 13 487 5 451 9.58e-44 160
Msa1064500 MtrunA17_Chr8g0377941 27.381 504 297 17 8 486 2 461 1.71e-43 160
Msa1064500 MtrunA17_Chr8g0339451 30.607 428 228 15 88 481 66 458 2.21e-43 159
Msa1064500 MtrunA17_Chr5g0442541 29.459 499 285 24 13 484 5 463 3.80e-43 159
Msa1064500 MtrunA17_Chr3g0079731 25.347 505 308 14 14 483 7 477 4.38e-43 159
Msa1064500 MtrunA17_Chr8g0335141 27.273 506 304 14 9 489 5 471 5.43e-43 159
Msa1064500 MtrunA17_Chr7g0218841 27.686 484 285 17 13 483 6 437 8.18e-43 157
Msa1064500 MtrunA17_Chr8g0334831 28.543 508 286 17 14 483 7 475 8.32e-43 158
Msa1064500 MtrunA17_Chr8g0336741 29.341 501 285 19 9 482 9 467 1.19e-42 157
Msa1064500 MtrunA17_Chr6g0462531 27.579 504 285 18 14 482 5 463 1.42e-42 157
Msa1064500 MtrunA17_Chr8g0357361 37.226 274 140 7 161 429 19 265 1.56e-42 152
Msa1064500 MtrunA17_Chr3g0112761 27.108 498 289 18 13 489 8 452 3.08e-42 156
Msa1064500 MtrunA17_Chr4g0053321 26.263 495 333 12 12 500 25 493 4.25e-42 157
Msa1064500 MtrunA17_Chr5g0431441 26.844 488 303 14 13 486 18 465 9.13e-42 155
Msa1064500 MtrunA17_Chr7g0243731 81.250 80 15 0 343 422 1 80 9.90e-42 144
Msa1064500 MtrunA17_Chr5g0412101 27.613 507 313 18 1 488 1 472 1.60e-41 154
Msa1064500 MtrunA17_Chr8g0334851 29.314 423 233 12 101 494 92 477 1.71e-41 154
Msa1064500 MtrunA17_Chr1g0153451 29.767 430 233 14 83 482 69 459 2.09e-41 154
Msa1064500 MtrunA17_Chr5g0412131 28.024 496 301 19 13 488 12 471 2.12e-41 154
Msa1064500 MtrunA17_Chr6g0462521 32.172 373 203 14 124 482 113 449 2.18e-41 154
Msa1064500 MtrunA17_Chr5g0442581 28.433 517 301 21 14 495 6 488 2.89e-41 155
Msa1064500 MtrunA17_Chr8g0373301 29.466 431 245 15 83 488 72 468 7.22e-41 152
Msa1064500 MtrunA17_Chr8g0336651 28.994 507 277 15 12 482 780 1239 8.13e-41 157
Msa1064500 MtrunA17_Chr8g0336651 31.061 396 229 11 104 482 92 460 6.52e-40 154
Msa1064500 MtrunA17_Chr8g0336651 35.664 286 140 6 207 490 535 778 5.18e-38 149
Msa1064500 MtrunA17_Chr7g0218791 27.158 475 295 15 13 477 5 438 8.45e-41 152
Msa1064500 MtrunA17_Chr5g0442561 25.755 497 313 17 13 484 5 470 1.08e-40 152
Msa1064500 MtrunA17_Chr6g0462571 28.370 497 288 16 14 484 5 459 1.16e-40 152
Msa1064500 MtrunA17_Chr1g0153461 41.150 226 109 5 276 489 2 215 1.22e-40 145
Msa1064500 MtrunA17_Chr5g0393591 25.296 506 283 16 13 499 17 446 3.66e-40 150
Msa1064500 MtrunA17_Chr8g0339461 30.303 396 212 13 124 489 113 474 3.85e-40 151
Msa1064500 MtrunA17_Chr5g0442491 28.515 505 289 20 14 484 6 472 5.42e-40 150
Msa1064500 MtrunA17_Chr3g0118661 27.723 505 294 18 13 485 13 478 7.75e-40 150
Msa1064500 MtrunA17_Chr7g0232311 31.373 357 198 11 142 483 136 460 8.23e-40 150
Msa1064500 MtrunA17_Chr8g0336731 30.127 395 236 12 104 483 118 487 1.21e-39 150
Msa1064500 MtrunA17_Chr8g0339601 31.977 344 178 11 152 473 8 317 4.80e-39 144
Msa1064500 MtrunA17_Chr5g0412111 27.126 494 307 18 13 488 5 463 6.97e-39 147
Msa1064500 MtrunA17_Chr5g0442601 28.685 502 294 20 14 484 405 873 7.60e-39 150
Msa1064500 MtrunA17_Chr5g0442601 30.547 311 155 11 123 413 64 333 2.68e-26 113
Msa1064500 MtrunA17_Chr6g0454221 34.440 241 141 3 245 485 6 229 9.73e-39 143
Msa1064500 MtrunA17_Chr1g0207931 33.453 278 156 9 222 487 238 498 1.81e-38 147
Msa1064500 MtrunA17_Chr4g0066141 43.860 171 90 2 328 495 193 360 2.47e-38 143
Msa1064500 MtrunA17_Chr4g0066141 37.056 197 102 5 41 234 8 185 1.18e-26 110
Msa1064500 MtrunA17_Chr2g0302961 25.889 506 304 16 10 486 2 465 4.51e-38 145
Msa1064500 MtrunA17_Chr5g0431361 26.220 492 315 13 5 488 4 455 7.74e-38 144
Msa1064500 MtrunA17_Chr6g0454251 26.253 419 249 13 8 391 2 395 1.34e-37 142
Msa1064500 MtrunA17_Chr7g0232401 26.863 510 295 18 12 488 5 469 2.68e-37 143
Msa1064500 MtrunA17_Chr3g0118751 26.285 506 274 17 13 486 6 444 3.44e-37 142
Msa1064500 MtrunA17_Chr6g0462541 30.518 367 226 8 124 484 118 461 1.01e-36 141
Msa1064500 MtrunA17_Chr5g0431371 26.694 487 300 17 13 488 10 450 1.48e-36 140
Msa1064500 MtrunA17_Chr5g0403641 25.455 495 297 13 9 482 55 498 1.97e-36 141
Msa1064500 MtrunA17_Chr5g0431401 26.166 493 303 19 9 488 6 450 2.93e-36 139
Msa1064500 MtrunA17_Chr8g0334861 31.051 409 234 16 94 483 81 460 4.02e-36 139
Msa1064500 MtrunA17_Chr5g0431421 25.253 495 305 16 9 488 6 450 4.11e-36 139
Msa1064500 MtrunA17_Chr8g0339441 29.048 420 209 13 83 479 69 422 9.86e-36 138
Msa1064500 MtrunA17_Chr5g0401721 26.441 503 305 19 11 486 6 470 1.10e-35 138
Msa1064500 MtrunA17_Chr3g0118721 32.450 302 175 10 193 486 9 289 1.88e-35 134
Msa1064500 MtrunA17_Chr3g0106231 25.615 488 317 14 2 486 7 451 1.97e-35 137
Msa1064500 MtrunA17_Chr4g0072771 27.767 497 288 19 11 488 23 467 2.12e-35 137
Msa1064500 MtrunA17_Chr6g0454171 30.492 305 171 9 188 486 40 309 7.47e-35 132
Msa1064500 MtrunA17_Chr5g0429711 27.049 488 313 19 9 486 7 461 1.50e-34 135
Msa1064500 MtrunA17_Chr4g0032331 26.639 488 302 17 14 489 9 452 2.00e-34 134
Msa1064500 MtrunA17_Chr8g0355011 26.400 375 204 8 123 486 48 361 2.18e-34 132
Msa1064500 MtrunA17_Chr5g0426401 32.692 312 184 9 178 483 16 307 2.53e-34 131
Msa1064500 MtrunA17_Chr4g0072761 26.892 502 287 18 9 488 11 454 6.31e-34 133
Msa1064500 MtrunA17_Chr5g0429681 26.380 489 306 18 14 484 45 497 7.44e-34 134
Msa1064500 MtrunA17_Chr2g0302991 26.305 498 309 14 10 486 2 462 8.63e-34 133
Msa1064500 MtrunA17_Chr7g0249961 33.333 240 142 4 247 486 38 259 2.23e-33 127
Msa1064500 MtrunA17_Chr5g0409591 23.848 499 302 12 14 468 5 469 5.47e-33 131
Msa1064500 MtrunA17_Chr4g0069611 26.638 458 295 13 12 462 14 437 5.94e-33 130
Msa1064500 MtrunA17_Chr8g0336251 26.782 463 304 15 8 460 2 439 3.46e-32 128
Msa1064500 MtrunA17_Chr8g0336321 26.782 463 304 15 8 460 2 439 5.45e-32 128
Msa1064500 MtrunA17_Chr2g0278721 26.013 469 301 14 6 462 8 442 5.60e-32 130
Msa1064500 MtrunA17_Chr2g0278721 23.958 480 304 15 7 462 511 953 1.41e-25 111
Msa1064500 MtrunA17_Chr5g0442511 30.769 299 172 8 205 487 215 494 1.02e-31 127
Msa1064500 MtrunA17_Chr5g0432731 30.000 290 169 7 206 489 38 299 1.07e-31 123
Msa1064500 MtrunA17_Chr5g0448551 27.751 418 254 17 14 415 8 393 1.46e-31 126
Msa1064500 MtrunA17_Chr7g0241801 25.847 472 263 17 11 463 7 410 1.93e-31 125
Msa1064500 MtrunA17_Chr2g0278741 26.667 480 286 16 5 462 89 524 2.05e-31 127
Msa1064500 MtrunA17_Chr3g0079711 37.629 194 96 5 304 483 3 185 7.87e-31 118
Msa1064500 MtrunA17_Chr7g0241781 25.758 462 276 15 11 463 7 410 1.76e-30 123
Msa1064500 MtrunA17_Chr7g0232351 29.167 408 226 18 12 390 5 378 1.24e-29 119
Msa1064500 MtrunA17_Chr6g0482061 26.337 505 307 22 13 487 11 480 3.49e-29 120
Msa1064500 MtrunA17_Chr6g0466831 25.490 459 299 15 12 462 17 440 6.74e-29 119
Msa1064500 MtrunA17_Chr6g0464091 26.667 465 305 14 9 457 14 458 1.27e-28 118
Msa1064500 MtrunA17_Chr4g0042931 26.295 502 311 18 8 488 2 465 2.44e-28 117
Msa1064500 MtrunA17_Chr6g0454371 34.783 184 101 5 304 486 5 170 4.02e-28 110
Msa1064500 MtrunA17_Chr3g0106251 30.182 275 159 9 216 486 48 293 8.93e-28 113
Msa1064500 MtrunA17_Chr6g0466841 25.054 459 301 15 12 462 17 440 1.97e-27 114
Msa1064500 MtrunA17_Chr1g0196851 24.896 482 302 14 1 461 35 477 6.12e-27 114
Msa1064500 MtrunA17_Chr2g0302851 25.586 469 294 16 8 462 11 438 1.04e-26 112
Msa1064500 MtrunA17_Chr8g0337381 42.446 139 68 3 351 489 2 128 2.26e-26 103
Msa1064500 MtrunA17_Chr4g0029131 24.603 504 304 17 9 489 8 458 1.24e-25 110
Msa1064500 MtrunA17_Chr6g0454231 29.630 270 130 10 219 486 7 218 1.61e-25 109
Msa1064500 MtrunA17_Chr8g0367221 27.907 430 262 16 12 421 797 1198 8.98e-25 108
Msa1064500 MtrunA17_Chr8g0367221 25.822 426 275 15 12 421 11 411 1.31e-21 99.0
Msa1064500 MtrunA17_Chr8g0367221 24.797 492 319 19 12 488 1287 1742 6.17e-21 97.1
Msa1064500 MtrunA17_Chr4g0039881 26.005 423 272 15 23 433 2 395 1.25e-23 103
Msa1064500 MtrunA17_Chr4g0042891 28.470 281 167 9 218 488 211 467 4.67e-23 102
Msa1064500 MtrunA17_Chr1g0207881 22.474 485 269 19 8 487 3 385 5.51e-23 100
Msa1064500 MtrunA17_Chr8g0336261 34.899 149 81 2 304 452 5 137 1.53e-22 93.6
Msa1064500 MtrunA17_Chr4g0029151 22.782 496 323 16 9 489 16 466 2.10e-22 100
Msa1064500 MtrunA17_Chr4g0040691 24.477 478 290 16 8 461 3 433 4.56e-21 95.9
Msa1064500 MtrunA17_Chr7g0250021 25.882 340 193 13 8 324 7 310 5.86e-21 94.0
Msa1064500 MtrunA17_Chr3g0092031 31.694 183 111 5 280 462 6 174 2.71e-20 89.0
Msa1064500 MtrunA17_Chr5g0427571 29.070 258 160 8 207 460 35 273 3.88e-20 90.9
Msa1064500 MtrunA17_Chr4g0040711 23.679 473 300 15 8 461 3 433 6.84e-20 92.4
Msa1064500 MtrunA17_Chr2g0319731 23.840 474 304 16 5 461 17 450 3.19e-18 87.4
Msa1064500 MtrunA17_Chr2g0283041 22.311 502 324 16 10 492 4 458 1.13e-17 85.5
Msa1064500 MtrunA17_Chr2g0319761 23.543 446 293 13 12 445 7 416 4.03e-17 84.0
Msa1064500 MtrunA17_Chr2g0319751 23.210 461 285 14 12 461 7 409 4.67e-17 84.7
Msa1064500 MtrunA17_Chr2g0319751 23.799 458 310 13 12 461 484 910 1.90e-15 79.3
Msa1064500 MtrunA17_Chr5g0431431 28.500 200 119 4 211 408 147 324 4.80e-17 82.8
Msa1064500 MtrunA17_Chr2g0319801 24.051 474 299 16 7 461 2 433 7.07e-17 83.2
Msa1064500 MtrunA17_Chr2g0319791 23.176 466 303 16 12 461 7 433 1.40e-15 79.0
Msa1064500 MtrunA17_Chr7g0272701 33.333 126 81 2 104 226 27 152 7.53e-15 72.0
Msa1064500 MtrunA17_Chr6g0453981 26.829 205 135 6 132 324 3 204 6.02e-14 71.2
Msa1064500 MtrunA17_Chr6g0453941 30.667 150 98 3 179 324 110 257 8.44e-14 71.6
Msa1064500 MtrunA17_Chr4g0066231 40.000 80 42 2 389 465 1 77 6.80e-13 63.9
Msa1064500 MtrunA17_Chr6g0477011 25.080 311 204 8 12 315 15 303 7.20e-13 69.3
Msa1064500 MtrunA17_Chr6g0454391 34.884 86 43 1 362 447 8 80 7.84e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1064500 AT4G34131.1 42.308 494 261 11 5 488 2 481 1.65e-126 377
Msa1064500 AT4G34135.1 42.480 492 264 9 5 488 3 483 5.39e-124 371
Msa1064500 AT2G15490.3 40.491 489 270 9 11 490 5 481 5.19e-123 369
Msa1064500 AT2G15490.1 40.244 492 270 9 11 490 5 484 2.89e-122 367
Msa1064500 AT2G36770.1 39.315 496 290 8 4 493 5 495 6.00e-122 366
Msa1064500 AT2G15480.1 38.990 495 281 9 5 490 2 484 6.65e-120 360
Msa1064500 AT2G15480.2 38.095 504 283 9 5 490 2 494 2.53e-119 359
Msa1064500 AT2G36780.1 38.306 496 295 7 4 493 5 495 1.03e-117 355
Msa1064500 AT2G36800.1 38.569 503 282 11 1 489 1 490 6.17e-117 353
Msa1064500 AT2G36790.1 39.192 495 287 9 7 492 4 493 1.36e-113 345
Msa1064500 AT2G36760.1 37.550 498 296 9 4 493 5 495 4.74e-113 343
Msa1064500 AT2G36750.1 37.751 498 280 9 12 494 9 491 2.84e-112 341
Msa1064500 AT4G34138.1 39.759 498 268 13 10 494 8 486 4.49e-110 335
Msa1064500 AT3G53160.1 36.550 487 294 10 8 486 3 482 1.70e-101 313
Msa1064500 AT3G53150.1 36.436 505 297 9 1 486 10 509 1.38e-99 309
Msa1064500 AT4G34135.2 39.514 329 187 5 5 325 3 327 1.08e-75 242
Msa1064500 AT5G14860.1 33.665 502 271 20 13 486 8 475 4.87e-64 216
Msa1064500 AT1G22400.1 30.268 522 303 15 1 494 1 489 1.05e-63 215
Msa1064500 AT1G22380.1 30.357 504 309 14 1 486 1 480 2.07e-62 211
Msa1064500 AT2G16890.2 31.890 508 273 17 8 486 4 467 3.08e-62 211
Msa1064500 AT1G22340.1 29.331 508 310 15 1 486 1 481 1.49e-57 199
Msa1064500 AT1G10400.1 30.629 493 290 15 11 486 5 462 3.72e-57 197
Msa1064500 AT2G16890.3 31.818 462 244 15 8 441 4 422 1.45e-55 192
Msa1064500 AT1G22360.1 28.685 502 296 14 13 486 10 477 1.09e-54 191
Msa1064500 AT1G78270.1 29.528 508 308 13 1 486 1 480 1.98e-54 190
Msa1064500 AT1G22370.2 26.786 504 322 13 1 486 1 475 2.91e-53 187
Msa1064500 AT1G05675.1 29.072 485 289 14 13 483 6 449 5.81e-53 186
Msa1064500 AT5G03490.1 28.247 485 302 16 13 489 19 465 2.54e-52 184
Msa1064500 AT4G01070.1 30.435 506 290 18 13 494 8 475 1.05e-51 183
Msa1064500 AT1G05680.1 28.660 485 291 15 13 483 6 449 1.71e-51 181
Msa1064500 AT1G73880.1 27.856 499 309 16 10 493 11 473 2.69e-51 181
Msa1064500 AT2G31790.1 29.106 481 296 14 13 483 8 453 2.86e-51 181
Msa1064500 AT1G22360.2 29.234 431 258 11 13 416 10 420 6.02e-51 181
Msa1064500 AT1G01420.2 30.059 509 281 20 4 482 2 465 1.41e-50 180
Msa1064500 AT1G01420.1 30.159 504 277 20 9 482 4 462 4.71e-50 178
Msa1064500 AT2G31750.1 27.902 491 293 17 13 486 8 454 2.01e-49 176
Msa1064500 AT2G31750.2 27.902 491 293 17 13 486 8 454 4.30e-49 176
Msa1064500 AT2G43820.1 27.859 481 303 14 13 488 7 448 8.23e-49 174
Msa1064500 AT3G11340.1 28.745 494 279 17 14 489 9 447 3.03e-48 172
Msa1064500 AT3G50740.1 28.902 519 278 21 13 489 7 476 3.34e-48 173
Msa1064500 AT5G12890.1 26.892 502 323 14 5 485 2 480 5.22e-48 173
Msa1064500 AT1G51210.1 28.632 468 262 19 13 462 20 433 1.21e-47 171
Msa1064500 AT5G26310.1 29.026 534 273 21 13 499 7 481 3.15e-47 171
Msa1064500 AT4G15480.1 26.357 516 327 17 1 496 7 489 3.39e-47 171
Msa1064500 AT2G43840.1 28.247 485 294 17 13 487 7 447 5.45e-47 169
Msa1064500 AT3G02100.1 26.916 509 303 18 1 488 1 461 6.95e-47 169
Msa1064500 AT2G43840.2 28.041 485 295 17 13 487 7 447 1.35e-46 168
Msa1064500 AT1G06000.1 29.518 498 269 18 5 486 2 433 1.99e-46 167
Msa1064500 AT5G05870.1 27.888 502 291 17 7 486 2 454 2.01e-46 168
Msa1064500 AT5G66690.1 28.320 512 280 21 13 487 7 468 5.07e-46 167
Msa1064500 AT1G24100.1 28.745 494 286 19 13 486 11 458 7.22e-46 166
Msa1064500 AT5G05860.1 26.800 500 293 16 6 486 2 447 1.35e-45 166
Msa1064500 AT2G28080.1 27.479 484 307 14 17 488 22 473 4.92e-45 165
Msa1064500 AT2G36970.1 26.559 497 320 14 13 493 10 477 6.07e-45 165
Msa1064500 AT4G15500.1 26.761 497 306 17 13 490 9 466 2.11e-44 163
Msa1064500 AT1G07260.1 27.219 507 299 19 11 486 4 471 4.23e-44 162
Msa1064500 AT4G15550.1 28.458 506 307 18 1 485 1 472 6.06e-44 162
Msa1064500 AT5G05880.1 27.054 499 299 14 7 489 2 451 7.26e-44 161
Msa1064500 AT3G21760.1 27.148 512 304 18 11 486 2 480 1.33e-43 161
Msa1064500 AT4G15490.1 25.875 514 310 17 9 494 4 474 1.97e-43 160
Msa1064500 AT2G29740.1 27.006 511 300 18 9 486 4 474 2.21e-43 160
Msa1064500 AT3G16520.3 31.099 373 212 11 124 483 116 456 5.39e-43 159
Msa1064500 AT3G21800.1 26.877 506 309 17 10 486 2 475 5.84e-43 159
Msa1064500 AT4G36770.1 29.352 494 267 22 11 472 2 445 3.20e-42 156
Msa1064500 AT4G14090.1 27.148 512 288 18 1 485 1 454 6.83e-42 155
Msa1064500 AT3G46680.1 27.329 483 296 18 13 484 9 447 1.21e-41 155
Msa1064500 AT3G21560.1 25.455 495 314 18 13 486 12 472 1.69e-41 155
Msa1064500 AT2G23250.1 26.891 476 288 14 23 486 8 435 4.38e-41 153
Msa1064500 AT2G18570.1 25.549 501 299 18 10 479 2 459 1.33e-40 152
Msa1064500 AT4G15260.1 29.521 376 214 10 134 486 7 354 1.35e-40 150
Msa1064500 AT3G16520.1 30.748 361 205 11 124 471 116 444 6.42e-40 150
Msa1064500 AT2G29730.1 26.693 502 306 18 12 490 4 466 7.36e-40 150
Msa1064500 AT3G16520.2 30.748 361 205 11 124 471 116 444 7.42e-40 150
Msa1064500 AT1G01390.1 29.541 501 285 19 10 483 5 464 8.11e-40 150
Msa1064500 AT1G01390.2 29.940 501 283 20 10 483 22 481 9.50e-40 150
Msa1064500 AT2G30140.1 26.096 502 298 16 1 483 1 448 1.07e-39 149
Msa1064500 AT3G46660.1 26.113 494 297 18 14 489 15 458 1.22e-39 149
Msa1064500 AT2G30150.2 25.761 493 300 14 13 489 13 455 1.38e-39 149
Msa1064500 AT3G21790.1 26.367 512 306 19 11 486 2 478 1.39e-39 150
Msa1064500 AT5G05900.1 26.931 505 277 17 9 484 4 445 1.44e-39 149
Msa1064500 AT2G23260.1 25.052 483 322 14 9 486 6 453 3.17e-39 148
Msa1064500 AT3G46650.1 26.915 483 276 17 13 482 10 428 1.05e-38 146
Msa1064500 AT3G55700.1 26.166 493 301 13 13 489 8 453 1.06e-38 147
Msa1064500 AT2G30140.2 25.549 501 301 15 1 483 1 447 1.37e-38 146
Msa1064500 AT5G59590.1 24.385 488 311 14 11 486 8 449 1.43e-38 146
Msa1064500 AT1G22370.1 30.719 306 175 8 193 486 25 305 3.16e-38 142
Msa1064500 AT2G30150.1 25.562 489 298 14 17 489 1 439 3.37e-38 145
Msa1064500 AT3G46670.1 25.506 494 300 20 13 489 9 451 3.73e-38 145
Msa1064500 AT1G07240.1 26.477 491 322 12 14 486 6 475 4.30e-38 145
Msa1064500 AT1G07250.1 27.092 502 307 19 11 486 4 472 4.55e-38 145
Msa1064500 AT4G15280.2 26.562 512 314 18 4 486 27 505 1.00e-37 145
Msa1064500 AT3G46700.1 25.562 489 300 15 13 488 9 446 2.06e-37 143
Msa1064500 AT5G59580.1 25.820 488 305 18 13 489 9 450 4.08e-37 142
Msa1064500 AT4G15280.1 26.733 505 308 18 11 486 2 473 4.74e-37 142
Msa1064500 AT5G05890.1 25.882 510 295 15 7 489 2 455 4.08e-36 139
Msa1064500 AT3G55710.1 27.291 502 294 15 13 492 8 460 4.71e-36 139
Msa1064500 AT1G05530.1 26.061 495 304 16 11 486 3 454 1.30e-35 138
Msa1064500 AT2G18560.1 34.101 217 123 5 273 479 163 369 2.56e-35 136
Msa1064500 AT3G21750.1 27.163 497 311 16 11 486 2 468 9.37e-35 136
Msa1064500 AT3G21780.1 23.518 506 318 16 11 486 2 468 2.95e-34 135
Msa1064500 AT2G26480.1 25.866 491 292 17 11 483 6 442 5.34e-34 134
Msa1064500 AT5G38010.1 25.049 507 298 18 6 486 3 453 6.66e-34 133
Msa1064500 AT3G46690.1 25.767 489 304 16 13 488 9 451 8.22e-34 133
Msa1064500 AT2G29750.1 25.549 501 311 19 13 486 8 473 2.01e-33 132
Msa1064500 AT2G15490.2 30.645 186 121 2 11 188 5 190 3.12e-33 127
Msa1064500 AT2G15490.2 26.471 204 116 9 311 490 77 270 1.80e-11 65.1
Msa1064500 AT3G46720.1 25.304 494 291 16 13 488 9 442 4.93e-33 130
Msa1064500 AT1G30530.1 25.462 487 302 15 13 486 12 450 2.18e-32 129
Msa1064500 AT5G38040.1 27.500 480 282 18 23 486 20 449 1.38e-31 127
Msa1064500 AT1G05560.1 27.455 499 285 23 13 486 5 451 1.54e-31 127
Msa1064500 AT1G05560.2 27.455 499 285 23 13 486 55 501 2.04e-31 127
Msa1064500 AT5G17050.1 22.887 485 323 12 13 486 12 456 9.16e-31 124
Msa1064500 AT2G29710.1 25.558 493 311 18 14 486 6 462 9.21e-31 124
Msa1064500 AT5G17030.1 22.710 524 295 16 3 486 2 455 9.31e-30 122
Msa1064500 AT5G17040.2 30.622 209 125 3 278 486 149 337 4.43e-28 115
Msa1064500 AT5G17040.1 30.622 209 125 3 278 486 251 439 6.79e-28 116
Msa1064500 AT5G65550.1 24.947 473 305 15 11 463 7 449 2.31e-26 112
Msa1064500 AT2G16890.4 29.464 336 178 12 8 315 4 308 1.45e-25 107
Msa1064500 AT2G16890.1 29.464 336 178 12 8 315 4 308 1.45e-25 107
Msa1064500 AT5G49690.1 23.274 507 303 16 12 493 9 454 1.56e-25 109
Msa1064500 AT3G22250.1 25.959 443 259 18 14 421 9 417 3.67e-25 108
Msa1064500 AT4G27570.1 24.598 435 277 13 11 432 5 401 5.88e-21 95.9
Msa1064500 AT4G27560.1 23.488 430 280 12 11 428 5 397 1.04e-20 95.1
Msa1064500 AT2G22590.1 23.591 479 296 16 9 461 11 445 1.26e-20 95.1
Msa1064500 AT1G64910.1 23.810 441 271 15 9 431 2 395 5.78e-20 92.8
Msa1064500 AT3G29630.1 23.984 492 321 15 9 493 2 447 6.98e-20 92.4
Msa1064500 AT3G29630.2 23.732 493 295 16 9 493 2 421 2.97e-18 87.4
Msa1064500 AT5G53990.1 24.051 474 269 19 12 448 5 424 4.41e-18 87.0
Msa1064500 AT5G37950.1 24.825 286 188 9 114 390 76 343 1.44e-17 84.7
Msa1064500 AT5G37950.2 24.911 281 188 9 114 390 76 337 1.46e-17 84.3
Msa1064500 AT5G54010.1 22.299 435 294 11 9 433 2 402 4.12e-17 84.3
Msa1064500 AT1G50580.1 25.740 439 248 20 9 423 2 386 4.68e-17 84.0
Msa1064500 AT2G22930.1 22.793 487 312 19 12 487 5 438 2.77e-16 81.6
Msa1064500 AT4G01070.2 26.852 324 199 12 13 324 8 305 4.16e-16 80.1
Msa1064500 AT1G64920.1 21.837 490 327 15 9 489 2 444 1.61e-15 79.3
Msa1064500 AT5G54060.1 20.477 503 338 16 9 492 9 468 3.50e-13 72.0

Find 89 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTACATGAAGTTGGTTAT+TGG 0.179979 7_2:-57155515 None:intergenic
TGCTTTCTCACCAAGTTCTT+TGG 0.226097 7_2:-57156967 None:intergenic
ATGATGAAAGAAAGATTAAT+AGG 0.231278 7_2:+57156262 Msa1064500:CDS
AAGAGACAGAATTGCTAAAT+TGG 0.252729 7_2:+57156310 Msa1064500:CDS
GTCTATACTTCATGATAAAA+TGG 0.288695 7_2:-57155966 None:intergenic
GGCACCGCAACTTCTGATAT+TGG 0.297113 7_2:+57156557 Msa1064500:CDS
GATCAAAAGAGAACGAGTTT+TGG 0.300356 7_2:+57156739 Msa1064500:CDS
GTCACAATCCCTCCTGTTGC+AGG 0.300727 7_2:-57156585 None:intergenic
ACCTTTCCTCAAATGTTTGC+AGG 0.303425 7_2:-57156497 None:intergenic
ATAGATAGTGACTTCAATTC+AGG 0.340922 7_2:+57155664 Msa1064500:CDS
GGTAACATTAACACCATGTT+TGG 0.355665 7_2:-57155599 None:intergenic
TTCTTTGTCCTTAACCAATC+AGG 0.374627 7_2:-57156072 None:intergenic
TGATGAAAGAAAGATTAATA+GGG 0.380610 7_2:+57156263 Msa1064500:CDS
TTGTTAACCCAAGCTGAAAC+TGG 0.384682 7_2:-57156237 None:intergenic
TGCAGCTTCCTGATTGGTTA+AGG 0.387102 7_2:+57156064 Msa1064500:CDS
ATATGGCCAGGAGTTGGATA+TGG 0.394728 7_2:-57155544 None:intergenic
CTCCTCTGCAGCTTCCTGAT+TGG 0.396100 7_2:+57156058 Msa1064500:CDS
GCAGAAAGGGCTATATCATA+TGG 0.398657 7_2:+57156529 Msa1064500:CDS
TCTGTATTGTACGTAAGTTT+TGG 0.408487 7_2:+57156354 Msa1064500:CDS
CTACAATGGGAATCAAATCT+TGG 0.413327 7_2:+57156205 Msa1064500:CDS
ATTTCTACAAGTTGAGCATA+AGG 0.418094 7_2:-57156393 None:intergenic
TAGTCTTGCTGTGTCTATCA+TGG 0.421529 7_2:-57155572 None:intergenic
ACCTTCCTCAATAGTCCTCT+TGG 0.430377 7_2:-57156886 None:intergenic
ATATTGGACCACCCTGCAAC+AGG 0.435072 7_2:+57156573 Msa1064500:CDS
TTGAAGATTGGAGTTTCTGT+TGG 0.449747 7_2:+57156717 Msa1064500:CDS
TGGTTTCCTGCAAACATTTG+AGG 0.459285 7_2:+57156491 Msa1064500:CDS
TGTAGTGGCAATTGTGAGAA+GGG 0.460778 7_2:+57156773 Msa1064500:CDS
AAACTTAGTCAAACTACAAT+GGG 0.460803 7_2:+57156192 Msa1064500:CDS
AGGGCTATATCATATGGGAT+TGG 0.463124 7_2:+57156535 Msa1064500:CDS
GGGCTATATCATATGGGATT+GGG 0.468084 7_2:+57156536 Msa1064500:CDS
AAAATGGGCCATGTGATCAT+TGG 0.469481 7_2:-57156654 None:intergenic
ACAAGACCTCGATTGAATCT+TGG 0.474980 7_2:-57155816 None:intergenic
TGTAGGACCAGTTTCAGCTT+GGG 0.477377 7_2:+57156230 Msa1064500:CDS
GTGTAGGACCAGTTTCAGCT+TGG 0.485685 7_2:+57156229 Msa1064500:CDS
GAGCTGTAATAGTAAATCCT+TGG 0.491239 7_2:-57155919 None:intergenic
GATAAAATGGAAGGCACAGT+TGG 0.491624 7_2:-57155953 None:intergenic
TTTCTTCCATATCCAACTCC+TGG 0.492575 7_2:+57155538 Msa1064500:CDS
GGAACTTCACTTGAAATGCT+TGG 0.495915 7_2:+57155766 Msa1064500:CDS
TCACTGATATGCTGTATCCT+TGG 0.504729 7_2:+57155866 Msa1064500:CDS
ATCATGGGATTCATATGGCC+AGG 0.507139 7_2:-57155556 None:intergenic
GGACACATGGAGAACAACTT+TGG 0.507729 7_2:+57156285 Msa1064500:CDS
CAGTTCCCTTCAGCTCAAGT+TGG 0.509931 7_2:+57155712 Msa1064500:CDS
TGTCTATCATGGGATTCATA+TGG 0.512938 7_2:-57155561 None:intergenic
GCTCAAGTTGGTCTCCCTGA+TGG 0.517552 7_2:+57155724 Msa1064500:CDS
TCCTGCAAACATTTGAGGAA+AGG 0.518027 7_2:+57156496 Msa1064500:CDS
ATTCTCGAAAGCTTGAATGC+TGG 0.527581 7_2:+57156627 Msa1064500:CDS
TTGAAGAAATCCAAAGAACT+TGG 0.531374 7_2:+57156957 Msa1064500:CDS
GGGAGACCAACTTGAGCTGA+AGG 0.537026 7_2:-57155718 None:intergenic
GGATTCATATGGCCAGGAGT+TGG 0.537267 7_2:-57155550 None:intergenic
GGAATCAAATCTTGGAGTGT+AGG 0.545383 7_2:+57156213 Msa1064500:CDS
CAGAAAGGGCTATATCATAT+GGG 0.547488 7_2:+57156530 Msa1064500:CDS
GATGAAAGAAAGATTAATAG+GGG 0.550702 7_2:+57156264 Msa1064500:CDS
AGTCTTGCTGTGTCTATCAT+GGG 0.552969 7_2:-57155571 None:intergenic
GTGTAGTGGCAATTGTGAGA+AGG 0.556680 7_2:+57156772 Msa1064500:CDS
TCACAATCCCTCCTGTTGCA+GGG 0.560070 7_2:-57156584 None:intergenic
GATAGAGATGAGGATGAAGA+TGG 0.562097 7_2:+57156471 Msa1064500:CDS
ATATCAGTGACTATACAATC+AGG 0.562860 7_2:-57155853 None:intergenic
CTGCGAAACTAAACATTCCA+AGG 0.574332 7_2:+57155902 Msa1064500:CDS
GGAGTCATCTCAATTGTATG+AGG 0.575171 7_2:-57156039 None:intergenic
TTGGAATAGAATTAGTGTAG+TGG 0.577461 7_2:+57156758 Msa1064500:CDS
TCGATTGAATCTTGGAGCAT+CGG 0.577655 7_2:-57155808 None:intergenic
CTGGTTTGCCAATGATCACA+TGG 0.578098 7_2:+57156646 Msa1064500:CDS
ATTAGCATGTGTAGTGATGA+TGG 0.581001 7_2:-57155620 None:intergenic
ATACTTCATGATAAAATGGA+AGG 0.583918 7_2:-57155962 None:intergenic
GAAACTTAGTCAAACTACAA+TGG 0.585447 7_2:+57156191 Msa1064500:CDS
AAAGATTAATAGGGGACACA+TGG 0.592360 7_2:+57156272 Msa1064500:CDS
AACCAATCAGGAAGCTGCAG+AGG 0.592936 7_2:-57156060 None:intergenic
GCAGCTGATTCAACACTCCA+AGG 0.598937 7_2:-57155883 None:intergenic
GCAAGACTATTTGCCAAACA+TGG 0.600388 7_2:+57155586 Msa1064500:CDS
GAGCATAAGGATGCCAAACA+AGG 0.601306 7_2:-57156380 None:intergenic
TGCTGCCAAGAGGACTATTG+AGG 0.603529 7_2:+57156881 Msa1064500:CDS
GGATTGTGACTCACTGTGGT+TGG 0.613470 7_2:+57156598 Msa1064500:CDS
AAGAGGACTATTGAGGAAGG+TGG 0.618661 7_2:+57156888 Msa1064500:CDS
GGAGACCAACTTGAGCTGAA+GGG 0.621494 7_2:-57155717 None:intergenic
TGGTCCAATATCAGAAGTTG+CGG 0.626003 7_2:-57156561 None:intergenic
TTGGACCACCCTGCAACAGG+AGG 0.626433 7_2:+57156576 Msa1064500:CDS
GCCAAGAGGACTATTGAGGA+AGG 0.631460 7_2:+57156885 Msa1064500:CDS
CTTGGAGCATCGGTATCGCA+CGG 0.643905 7_2:-57155798 None:intergenic
TCAATTGTATGAGGAAAACA+AGG 0.644557 7_2:-57156030 None:intergenic
TCAGAAACTAAATTATCATG+AGG 0.644747 7_2:-57155988 None:intergenic
GGTGTTGAAAACTTCAAACA+TGG 0.657961 7_2:+57155745 Msa1064500:CDS
CAATCCCTCCTGTTGCAGGG+TGG 0.662377 7_2:-57156581 None:intergenic
AGCTTGGCGATGCTGCCAAG+AGG 0.663146 7_2:+57156871 Msa1064500:CDS
ACGAAAGTATGATAGAGATG+AGG 0.663595 7_2:+57156461 Msa1064500:CDS
TGGACCACCCTGCAACAGGA+GGG 0.671876 7_2:+57156577 Msa1064500:CDS
CAACTTGTAGAAATTGCACA+CGG 0.695443 7_2:+57156402 Msa1064500:CDS
GAGAAGGGAAGAGATTGCAA+AGG 0.700366 7_2:+57156788 Msa1064500:CDS
GATGCTCCAAGATTCAATCG+AGG 0.746649 7_2:+57155810 Msa1064500:CDS
GGAGGGATTGTGACTCACTG+TGG 0.790295 7_2:+57156594 Msa1064500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAATAAGTTGAGTTTTAATA+AGG - chr7_2:57155693-57155712 None:intergenic 20.0%
!! ATGATGAAAGAAAGATTAAT+AGG + chr7_2:57156262-57156281 Msa1064500:CDS 20.0%
!! TGATGAAAGAAAGATTAATA+GGG + chr7_2:57156263-57156282 Msa1064500:CDS 20.0%
!!! ATTCATGTCATAATTTTATC+TGG + chr7_2:57156433-57156452 Msa1064500:CDS 20.0%
!!! TTCATGTCATAATTTTATCT+GGG + chr7_2:57156434-57156453 Msa1064500:CDS 20.0%
!!! GAATAAGTTGAGTTTTAATA+AGG - chr7_2:57155693-57155712 None:intergenic 20.0%
!! ATGATGAAAGAAAGATTAAT+AGG + chr7_2:57156262-57156281 Msa1064500:CDS 20.0%
!! TGATGAAAGAAAGATTAATA+GGG + chr7_2:57156263-57156282 Msa1064500:CDS 20.0%
!!! ATTCATGTCATAATTTTATC+TGG + chr7_2:57156433-57156452 Msa1064500:CDS 20.0%
!!! TTCATGTCATAATTTTATCT+GGG + chr7_2:57156434-57156453 Msa1064500:CDS 20.0%
!! AATTACATGAAGTTGGTTAT+TGG - chr7_2:57155518-57155537 None:intergenic 25.0%
! GAAGAAAAATTACATGAAGT+TGG - chr7_2:57155525-57155544 None:intergenic 25.0%
!! AGTCACTATCTATAGATTTT+TGG - chr7_2:57155657-57155676 None:intergenic 25.0%
! ATACTTCATGATAAAATGGA+AGG - chr7_2:57155965-57155984 None:intergenic 25.0%
! GTCTATACTTCATGATAAAA+TGG - chr7_2:57155969-57155988 None:intergenic 25.0%
! TCAGAAACTAAATTATCATG+AGG - chr7_2:57155991-57156010 None:intergenic 25.0%
! TTCAAACACTTGTTCAAAAA+AGG - chr7_2:57156109-57156128 None:intergenic 25.0%
!! TTTTGAACAAGTGTTTGAAT+CGG + chr7_2:57156110-57156129 Msa1064500:CDS 25.0%
! GAATCGGAAAAAAAAAGTTA+TGG + chr7_2:57156126-57156145 Msa1064500:CDS 25.0%
! AAACTTAGTCAAACTACAAT+GGG + chr7_2:57156192-57156211 Msa1064500:CDS 25.0%
! GATGAAAGAAAGATTAATAG+GGG + chr7_2:57156264-57156283 Msa1064500:CDS 25.0%
! TTAAATTGCTCAGCAAAAAT+GGG - chr7_2:57156672-57156691 None:intergenic 25.0%
!! AATTACATGAAGTTGGTTAT+TGG - chr7_2:57155518-57155537 None:intergenic 25.0%
! GAAGAAAAATTACATGAAGT+TGG - chr7_2:57155525-57155544 None:intergenic 25.0%
!! AGTCACTATCTATAGATTTT+TGG - chr7_2:57155657-57155676 None:intergenic 25.0%
! ATACTTCATGATAAAATGGA+AGG - chr7_2:57155965-57155984 None:intergenic 25.0%
! GTCTATACTTCATGATAAAA+TGG - chr7_2:57155969-57155988 None:intergenic 25.0%
! TCAGAAACTAAATTATCATG+AGG - chr7_2:57155991-57156010 None:intergenic 25.0%
! TTCAAACACTTGTTCAAAAA+AGG - chr7_2:57156109-57156128 None:intergenic 25.0%
!! TTTTGAACAAGTGTTTGAAT+CGG + chr7_2:57156110-57156129 Msa1064500:CDS 25.0%
! GAATCGGAAAAAAAAAGTTA+TGG + chr7_2:57156126-57156145 Msa1064500:CDS 25.0%
! AAACTTAGTCAAACTACAAT+GGG + chr7_2:57156192-57156211 Msa1064500:CDS 25.0%
! GATGAAAGAAAGATTAATAG+GGG + chr7_2:57156264-57156283 Msa1064500:CDS 25.0%
! TTAAATTGCTCAGCAAAAAT+GGG - chr7_2:57156672-57156691 None:intergenic 25.0%
ATAGATAGTGACTTCAATTC+AGG + chr7_2:57155664-57155683 Msa1064500:CDS 30.0%
ATATCAGTGACTATACAATC+AGG - chr7_2:57155856-57155875 None:intergenic 30.0%
TCAATTGTATGAGGAAAACA+AGG - chr7_2:57156033-57156052 None:intergenic 30.0%
ACACTTGTTCAAAAAAGGAA+GGG - chr7_2:57156104-57156123 None:intergenic 30.0%
AACACTTGTTCAAAAAAGGA+AGG - chr7_2:57156105-57156124 None:intergenic 30.0%
GAAACTTAGTCAAACTACAA+TGG + chr7_2:57156191-57156210 Msa1064500:CDS 30.0%
AAGAGACAGAATTGCTAAAT+TGG + chr7_2:57156310-57156329 Msa1064500:CDS 30.0%
! TCTGTATTGTACGTAAGTTT+TGG + chr7_2:57156354-57156373 Msa1064500:CDS 30.0%
! ATTTCTACAAGTTGAGCATA+AGG - chr7_2:57156396-57156415 None:intergenic 30.0%
AAGGTTGAAAAAAAGCAGAA+AGG + chr7_2:57156515-57156534 Msa1064500:CDS 30.0%
AGGTTGAAAAAAAGCAGAAA+GGG + chr7_2:57156516-57156535 Msa1064500:CDS 30.0%
GTTAAATTGCTCAGCAAAAA+TGG - chr7_2:57156673-57156692 None:intergenic 30.0%
!!! CTTGTTGATGTTTTGAAGAT+TGG + chr7_2:57156705-57156724 Msa1064500:CDS 30.0%
TTGGAATAGAATTAGTGTAG+TGG + chr7_2:57156758-57156777 Msa1064500:CDS 30.0%
AGAATGAAAGCTAAAAAGCT+TGG + chr7_2:57156855-57156874 Msa1064500:CDS 30.0%
TTGAAGAAATCCAAAGAACT+TGG + chr7_2:57156957-57156976 Msa1064500:CDS 30.0%
ATAGATAGTGACTTCAATTC+AGG + chr7_2:57155664-57155683 Msa1064500:CDS 30.0%
ATATCAGTGACTATACAATC+AGG - chr7_2:57155856-57155875 None:intergenic 30.0%
TCAATTGTATGAGGAAAACA+AGG - chr7_2:57156033-57156052 None:intergenic 30.0%
ACACTTGTTCAAAAAAGGAA+GGG - chr7_2:57156104-57156123 None:intergenic 30.0%
AACACTTGTTCAAAAAAGGA+AGG - chr7_2:57156105-57156124 None:intergenic 30.0%
GAAACTTAGTCAAACTACAA+TGG + chr7_2:57156191-57156210 Msa1064500:CDS 30.0%
AAGAGACAGAATTGCTAAAT+TGG + chr7_2:57156310-57156329 Msa1064500:CDS 30.0%
! TCTGTATTGTACGTAAGTTT+TGG + chr7_2:57156354-57156373 Msa1064500:CDS 30.0%
! ATTTCTACAAGTTGAGCATA+AGG - chr7_2:57156396-57156415 None:intergenic 30.0%
AAGGTTGAAAAAAAGCAGAA+AGG + chr7_2:57156515-57156534 Msa1064500:CDS 30.0%
AGGTTGAAAAAAAGCAGAAA+GGG + chr7_2:57156516-57156535 Msa1064500:CDS 30.0%
GTTAAATTGCTCAGCAAAAA+TGG - chr7_2:57156673-57156692 None:intergenic 30.0%
!!! CTTGTTGATGTTTTGAAGAT+TGG + chr7_2:57156705-57156724 Msa1064500:CDS 30.0%
TTGGAATAGAATTAGTGTAG+TGG + chr7_2:57156758-57156777 Msa1064500:CDS 30.0%
AGAATGAAAGCTAAAAAGCT+TGG + chr7_2:57156855-57156874 Msa1064500:CDS 30.0%
TTGAAGAAATCCAAAGAACT+TGG + chr7_2:57156957-57156976 Msa1064500:CDS 30.0%
TGTCTATCATGGGATTCATA+TGG - chr7_2:57155564-57155583 None:intergenic 35.0%
GGTAACATTAACACCATGTT+TGG - chr7_2:57155602-57155621 None:intergenic 35.0%
ATTAGCATGTGTAGTGATGA+TGG - chr7_2:57155623-57155642 None:intergenic 35.0%
! TGAAGTTTTCAACACCATCA+GGG - chr7_2:57155741-57155760 None:intergenic 35.0%
! TTGAAGTTTTCAACACCATC+AGG - chr7_2:57155742-57155761 None:intergenic 35.0%
! GGTGTTGAAAACTTCAAACA+TGG + chr7_2:57155745-57155764 Msa1064500:CDS 35.0%
GAGCTGTAATAGTAAATCCT+TGG - chr7_2:57155922-57155941 None:intergenic 35.0%
TTCTTTGTCCTTAACCAATC+AGG - chr7_2:57156075-57156094 None:intergenic 35.0%
CACTTGTTCAAAAAAGGAAG+GGG - chr7_2:57156103-57156122 None:intergenic 35.0%
CTACAATGGGAATCAAATCT+TGG + chr7_2:57156205-57156224 Msa1064500:CDS 35.0%
AAAGATTAATAGGGGACACA+TGG + chr7_2:57156272-57156291 Msa1064500:CDS 35.0%
CAACTTGTAGAAATTGCACA+CGG + chr7_2:57156402-57156421 Msa1064500:CDS 35.0%
! ACGAAAGTATGATAGAGATG+AGG + chr7_2:57156461-57156480 Msa1064500:CDS 35.0%
CAGAAAGGGCTATATCATAT+GGG + chr7_2:57156530-57156549 Msa1064500:CDS 35.0%
TTGAAGATTGGAGTTTCTGT+TGG + chr7_2:57156717-57156736 Msa1064500:CDS 35.0%
! GATCAAAAGAGAACGAGTTT+TGG + chr7_2:57156739-57156758 Msa1064500:CDS 35.0%
! AAAGGCTGTTGAGATTTTGA+TGG + chr7_2:57156806-57156825 Msa1064500:CDS 35.0%
!! AAGGCTGTTGAGATTTTGAT+GGG + chr7_2:57156807-57156826 Msa1064500:CDS 35.0%
TGTCTATCATGGGATTCATA+TGG - chr7_2:57155564-57155583 None:intergenic 35.0%
GGTAACATTAACACCATGTT+TGG - chr7_2:57155602-57155621 None:intergenic 35.0%
ATTAGCATGTGTAGTGATGA+TGG - chr7_2:57155623-57155642 None:intergenic 35.0%
! TGAAGTTTTCAACACCATCA+GGG - chr7_2:57155741-57155760 None:intergenic 35.0%
! TTGAAGTTTTCAACACCATC+AGG - chr7_2:57155742-57155761 None:intergenic 35.0%
! GGTGTTGAAAACTTCAAACA+TGG + chr7_2:57155745-57155764 Msa1064500:CDS 35.0%
GAGCTGTAATAGTAAATCCT+TGG - chr7_2:57155922-57155941 None:intergenic 35.0%
TTCTTTGTCCTTAACCAATC+AGG - chr7_2:57156075-57156094 None:intergenic 35.0%
CACTTGTTCAAAAAAGGAAG+GGG - chr7_2:57156103-57156122 None:intergenic 35.0%
CTACAATGGGAATCAAATCT+TGG + chr7_2:57156205-57156224 Msa1064500:CDS 35.0%
AAAGATTAATAGGGGACACA+TGG + chr7_2:57156272-57156291 Msa1064500:CDS 35.0%
CAACTTGTAGAAATTGCACA+CGG + chr7_2:57156402-57156421 Msa1064500:CDS 35.0%
! ACGAAAGTATGATAGAGATG+AGG + chr7_2:57156461-57156480 Msa1064500:CDS 35.0%
CAGAAAGGGCTATATCATAT+GGG + chr7_2:57156530-57156549 Msa1064500:CDS 35.0%
TTGAAGATTGGAGTTTCTGT+TGG + chr7_2:57156717-57156736 Msa1064500:CDS 35.0%
! GATCAAAAGAGAACGAGTTT+TGG + chr7_2:57156739-57156758 Msa1064500:CDS 35.0%
! AAAGGCTGTTGAGATTTTGA+TGG + chr7_2:57156806-57156825 Msa1064500:CDS 35.0%
!! AAGGCTGTTGAGATTTTGAT+GGG + chr7_2:57156807-57156826 Msa1064500:CDS 35.0%
TTTCTTCCATATCCAACTCC+TGG + chr7_2:57155538-57155557 Msa1064500:CDS 40.0%
! AGTCTTGCTGTGTCTATCAT+GGG - chr7_2:57155574-57155593 None:intergenic 40.0%
! TAGTCTTGCTGTGTCTATCA+TGG - chr7_2:57155575-57155594 None:intergenic 40.0%
GCAAGACTATTTGCCAAACA+TGG + chr7_2:57155586-57155605 Msa1064500:CDS 40.0%
GGAACTTCACTTGAAATGCT+TGG + chr7_2:57155766-57155785 Msa1064500:CDS 40.0%
TCGATTGAATCTTGGAGCAT+CGG - chr7_2:57155811-57155830 None:intergenic 40.0%
ACAAGACCTCGATTGAATCT+TGG - chr7_2:57155819-57155838 None:intergenic 40.0%
TCACTGATATGCTGTATCCT+TGG + chr7_2:57155866-57155885 Msa1064500:CDS 40.0%
CTGCGAAACTAAACATTCCA+AGG + chr7_2:57155902-57155921 Msa1064500:CDS 40.0%
! GATAAAATGGAAGGCACAGT+TGG - chr7_2:57155956-57155975 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG - chr7_2:57156042-57156061 None:intergenic 40.0%
GGAATCAAATCTTGGAGTGT+AGG + chr7_2:57156213-57156232 Msa1064500:CDS 40.0%
TTGTTAACCCAAGCTGAAAC+TGG - chr7_2:57156240-57156259 None:intergenic 40.0%
!!! TAAGTTTTGGCAGCCTTGTT+TGG + chr7_2:57156367-57156386 Msa1064500:CDS 40.0%
GATAGAGATGAGGATGAAGA+TGG + chr7_2:57156471-57156490 Msa1064500:CDS 40.0%
TGGTTTCCTGCAAACATTTG+AGG + chr7_2:57156491-57156510 Msa1064500:CDS 40.0%
TCCTGCAAACATTTGAGGAA+AGG + chr7_2:57156496-57156515 Msa1064500:CDS 40.0%
ACCTTTCCTCAAATGTTTGC+AGG - chr7_2:57156500-57156519 None:intergenic 40.0%
GCAGAAAGGGCTATATCATA+TGG + chr7_2:57156529-57156548 Msa1064500:CDS 40.0%
AGGGCTATATCATATGGGAT+TGG + chr7_2:57156535-57156554 Msa1064500:CDS 40.0%
GGGCTATATCATATGGGATT+GGG + chr7_2:57156536-57156555 Msa1064500:CDS 40.0%
TGGTCCAATATCAGAAGTTG+CGG - chr7_2:57156564-57156583 None:intergenic 40.0%
ATTCTCGAAAGCTTGAATGC+TGG + chr7_2:57156627-57156646 Msa1064500:CDS 40.0%
AAAATGGGCCATGTGATCAT+TGG - chr7_2:57156657-57156676 None:intergenic 40.0%
TGTAGTGGCAATTGTGAGAA+GGG + chr7_2:57156773-57156792 Msa1064500:CDS 40.0%
!! GTTGAGATTTTGATGGGAAG+TGG + chr7_2:57156813-57156832 Msa1064500:CDS 40.0%
TGCTTTCTCACCAAGTTCTT+TGG - chr7_2:57156970-57156989 None:intergenic 40.0%
TTTCTTCCATATCCAACTCC+TGG + chr7_2:57155538-57155557 Msa1064500:CDS 40.0%
! AGTCTTGCTGTGTCTATCAT+GGG - chr7_2:57155574-57155593 None:intergenic 40.0%
! TAGTCTTGCTGTGTCTATCA+TGG - chr7_2:57155575-57155594 None:intergenic 40.0%
GCAAGACTATTTGCCAAACA+TGG + chr7_2:57155586-57155605 Msa1064500:CDS 40.0%
GGAACTTCACTTGAAATGCT+TGG + chr7_2:57155766-57155785 Msa1064500:CDS 40.0%
TCGATTGAATCTTGGAGCAT+CGG - chr7_2:57155811-57155830 None:intergenic 40.0%
ACAAGACCTCGATTGAATCT+TGG - chr7_2:57155819-57155838 None:intergenic 40.0%
TCACTGATATGCTGTATCCT+TGG + chr7_2:57155866-57155885 Msa1064500:CDS 40.0%
CTGCGAAACTAAACATTCCA+AGG + chr7_2:57155902-57155921 Msa1064500:CDS 40.0%
! GATAAAATGGAAGGCACAGT+TGG - chr7_2:57155956-57155975 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG - chr7_2:57156042-57156061 None:intergenic 40.0%
GGAATCAAATCTTGGAGTGT+AGG + chr7_2:57156213-57156232 Msa1064500:CDS 40.0%
TTGTTAACCCAAGCTGAAAC+TGG - chr7_2:57156240-57156259 None:intergenic 40.0%
!!! TAAGTTTTGGCAGCCTTGTT+TGG + chr7_2:57156367-57156386 Msa1064500:CDS 40.0%
GATAGAGATGAGGATGAAGA+TGG + chr7_2:57156471-57156490 Msa1064500:CDS 40.0%
TGGTTTCCTGCAAACATTTG+AGG + chr7_2:57156491-57156510 Msa1064500:CDS 40.0%
TCCTGCAAACATTTGAGGAA+AGG + chr7_2:57156496-57156515 Msa1064500:CDS 40.0%
ACCTTTCCTCAAATGTTTGC+AGG - chr7_2:57156500-57156519 None:intergenic 40.0%
GCAGAAAGGGCTATATCATA+TGG + chr7_2:57156529-57156548 Msa1064500:CDS 40.0%
AGGGCTATATCATATGGGAT+TGG + chr7_2:57156535-57156554 Msa1064500:CDS 40.0%
GGGCTATATCATATGGGATT+GGG + chr7_2:57156536-57156555 Msa1064500:CDS 40.0%
TGGTCCAATATCAGAAGTTG+CGG - chr7_2:57156564-57156583 None:intergenic 40.0%
ATTCTCGAAAGCTTGAATGC+TGG + chr7_2:57156627-57156646 Msa1064500:CDS 40.0%
AAAATGGGCCATGTGATCAT+TGG - chr7_2:57156657-57156676 None:intergenic 40.0%
TGTAGTGGCAATTGTGAGAA+GGG + chr7_2:57156773-57156792 Msa1064500:CDS 40.0%
!! GTTGAGATTTTGATGGGAAG+TGG + chr7_2:57156813-57156832 Msa1064500:CDS 40.0%
TGCTTTCTCACCAAGTTCTT+TGG - chr7_2:57156970-57156989 None:intergenic 40.0%
ATATGGCCAGGAGTTGGATA+TGG - chr7_2:57155547-57155566 None:intergenic 45.0%
ATCATGGGATTCATATGGCC+AGG - chr7_2:57155559-57155578 None:intergenic 45.0%
GATGCTCCAAGATTCAATCG+AGG + chr7_2:57155810-57155829 Msa1064500:CDS 45.0%
! TGCAGCTTCCTGATTGGTTA+AGG + chr7_2:57156064-57156083 Msa1064500:CDS 45.0%
TGTAGGACCAGTTTCAGCTT+GGG + chr7_2:57156230-57156249 Msa1064500:CDS 45.0%
GGACACATGGAGAACAACTT+TGG + chr7_2:57156285-57156304 Msa1064500:CDS 45.0%
GAGCATAAGGATGCCAAACA+AGG - chr7_2:57156383-57156402 None:intergenic 45.0%
! CTGGTTTGCCAATGATCACA+TGG + chr7_2:57156646-57156665 Msa1064500:CDS 45.0%
GTGTAGTGGCAATTGTGAGA+AGG + chr7_2:57156772-57156791 Msa1064500:CDS 45.0%
GAGAAGGGAAGAGATTGCAA+AGG + chr7_2:57156788-57156807 Msa1064500:CDS 45.0%
ACCTTCCTCAATAGTCCTCT+TGG - chr7_2:57156889-57156908 None:intergenic 45.0%
AAGAGGACTATTGAGGAAGG+TGG + chr7_2:57156888-57156907 Msa1064500:CDS 45.0%
ATATGGCCAGGAGTTGGATA+TGG - chr7_2:57155547-57155566 None:intergenic 45.0%
ATCATGGGATTCATATGGCC+AGG - chr7_2:57155559-57155578 None:intergenic 45.0%
GATGCTCCAAGATTCAATCG+AGG + chr7_2:57155810-57155829 Msa1064500:CDS 45.0%
! TGCAGCTTCCTGATTGGTTA+AGG + chr7_2:57156064-57156083 Msa1064500:CDS 45.0%
TGTAGGACCAGTTTCAGCTT+GGG + chr7_2:57156230-57156249 Msa1064500:CDS 45.0%
GGACACATGGAGAACAACTT+TGG + chr7_2:57156285-57156304 Msa1064500:CDS 45.0%
GAGCATAAGGATGCCAAACA+AGG - chr7_2:57156383-57156402 None:intergenic 45.0%
! CTGGTTTGCCAATGATCACA+TGG + chr7_2:57156646-57156665 Msa1064500:CDS 45.0%
GTGTAGTGGCAATTGTGAGA+AGG + chr7_2:57156772-57156791 Msa1064500:CDS 45.0%
GAGAAGGGAAGAGATTGCAA+AGG + chr7_2:57156788-57156807 Msa1064500:CDS 45.0%
ACCTTCCTCAATAGTCCTCT+TGG - chr7_2:57156889-57156908 None:intergenic 45.0%
AAGAGGACTATTGAGGAAGG+TGG + chr7_2:57156888-57156907 Msa1064500:CDS 45.0%
GGATTCATATGGCCAGGAGT+TGG - chr7_2:57155553-57155572 None:intergenic 50.0%
CAGTTCCCTTCAGCTCAAGT+TGG + chr7_2:57155712-57155731 Msa1064500:CDS 50.0%
GGAGACCAACTTGAGCTGAA+GGG - chr7_2:57155720-57155739 None:intergenic 50.0%
! GCAGCTGATTCAACACTCCA+AGG - chr7_2:57155886-57155905 None:intergenic 50.0%
AACCAATCAGGAAGCTGCAG+AGG - chr7_2:57156063-57156082 None:intergenic 50.0%
GTGTAGGACCAGTTTCAGCT+TGG + chr7_2:57156229-57156248 Msa1064500:CDS 50.0%
GGCACCGCAACTTCTGATAT+TGG + chr7_2:57156557-57156576 Msa1064500:CDS 50.0%
ATATTGGACCACCCTGCAAC+AGG + chr7_2:57156573-57156592 Msa1064500:CDS 50.0%
TCACAATCCCTCCTGTTGCA+GGG - chr7_2:57156587-57156606 None:intergenic 50.0%
GGATTGTGACTCACTGTGGT+TGG + chr7_2:57156598-57156617 Msa1064500:CDS 50.0%
TGCTGCCAAGAGGACTATTG+AGG + chr7_2:57156881-57156900 Msa1064500:CDS 50.0%
GCCAAGAGGACTATTGAGGA+AGG + chr7_2:57156885-57156904 Msa1064500:CDS 50.0%
GGATTCATATGGCCAGGAGT+TGG - chr7_2:57155553-57155572 None:intergenic 50.0%
CAGTTCCCTTCAGCTCAAGT+TGG + chr7_2:57155712-57155731 Msa1064500:CDS 50.0%
GGAGACCAACTTGAGCTGAA+GGG - chr7_2:57155720-57155739 None:intergenic 50.0%
! GCAGCTGATTCAACACTCCA+AGG - chr7_2:57155886-57155905 None:intergenic 50.0%
AACCAATCAGGAAGCTGCAG+AGG - chr7_2:57156063-57156082 None:intergenic 50.0%
GTGTAGGACCAGTTTCAGCT+TGG + chr7_2:57156229-57156248 Msa1064500:CDS 50.0%
GGCACCGCAACTTCTGATAT+TGG + chr7_2:57156557-57156576 Msa1064500:CDS 50.0%
ATATTGGACCACCCTGCAAC+AGG + chr7_2:57156573-57156592 Msa1064500:CDS 50.0%
TCACAATCCCTCCTGTTGCA+GGG - chr7_2:57156587-57156606 None:intergenic 50.0%
GGATTGTGACTCACTGTGGT+TGG + chr7_2:57156598-57156617 Msa1064500:CDS 50.0%
TGCTGCCAAGAGGACTATTG+AGG + chr7_2:57156881-57156900 Msa1064500:CDS 50.0%
GCCAAGAGGACTATTGAGGA+AGG + chr7_2:57156885-57156904 Msa1064500:CDS 50.0%
GGGAGACCAACTTGAGCTGA+AGG - chr7_2:57155721-57155740 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+TGG + chr7_2:57155724-57155743 Msa1064500:CDS 55.0%
!! CTTGGAGCATCGGTATCGCA+CGG - chr7_2:57155801-57155820 None:intergenic 55.0%
CTCCTCTGCAGCTTCCTGAT+TGG + chr7_2:57156058-57156077 Msa1064500:CDS 55.0%
GTCACAATCCCTCCTGTTGC+AGG - chr7_2:57156588-57156607 None:intergenic 55.0%
GGAGGGATTGTGACTCACTG+TGG + chr7_2:57156594-57156613 Msa1064500:CDS 55.0%
GGGAGACCAACTTGAGCTGA+AGG - chr7_2:57155721-57155740 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+TGG + chr7_2:57155724-57155743 Msa1064500:CDS 55.0%
!! CTTGGAGCATCGGTATCGCA+CGG - chr7_2:57155801-57155820 None:intergenic 55.0%
CTCCTCTGCAGCTTCCTGAT+TGG + chr7_2:57156058-57156077 Msa1064500:CDS 55.0%
GTCACAATCCCTCCTGTTGC+AGG - chr7_2:57156588-57156607 None:intergenic 55.0%
GGAGGGATTGTGACTCACTG+TGG + chr7_2:57156594-57156613 Msa1064500:CDS 55.0%
TTGGACCACCCTGCAACAGG+AGG + chr7_2:57156576-57156595 Msa1064500:CDS 60.0%
TGGACCACCCTGCAACAGGA+GGG + chr7_2:57156577-57156596 Msa1064500:CDS 60.0%
CAATCCCTCCTGTTGCAGGG+TGG - chr7_2:57156584-57156603 None:intergenic 60.0%
AGCTTGGCGATGCTGCCAAG+AGG + chr7_2:57156871-57156890 Msa1064500:CDS 60.0%
TTGGACCACCCTGCAACAGG+AGG + chr7_2:57156576-57156595 Msa1064500:CDS 60.0%
TGGACCACCCTGCAACAGGA+GGG + chr7_2:57156577-57156596 Msa1064500:CDS 60.0%
CAATCCCTCCTGTTGCAGGG+TGG - chr7_2:57156584-57156603 None:intergenic 60.0%
AGCTTGGCGATGCTGCCAAG+AGG + chr7_2:57156871-57156890 Msa1064500:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 57155493 57156995 57155493 ID=Msa1064500;Name=Msa1064500
chr7_2 mRNA 57155493 57156995 57155493 ID=Msa1064500-mRNA-1;Parent=Msa1064500;Name=Msa1064500-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|-1|0|1|-1|1|1|0|500
chr7_2 exon 57155493 57156995 57155493 ID=Msa1064500-mRNA-1:exon:10842;Parent=Msa1064500-mRNA-1
chr7_2 CDS 57155493 57156995 57155493 ID=Msa1064500-mRNA-1:cds;Parent=Msa1064500-mRNA-1
Gene Sequence

>Msa1064500

ATGGAGTCACAATCTCAACAATCCAATAACCAACTTCATGTAATTTTTCTTCCATATCCAACTCCTGGCCATATGAATCCCATGATAGACACAGCAAGACTATTTGCCAAACATGGTGTTAATGTTACCATCATCACTACACATGCTAATGCTTCAACATTCCAAAAATCTATAGATAGTGACTTCAATTCAGGATACCTTATTAAAACTCAACTTATTCAGTTCCCTTCAGCTCAAGTTGGTCTCCCTGATGGTGTTGAAAACTTCAAACATGGAACTTCACTTGAAATGCTTGGTAAAATCAGCCGTGCGATACCGATGCTCCAAGATTCAATCGAGGTCTTGTTTCAAGAACTTCAACCTGATTGTATAGTCACTGATATGCTGTATCCTTGGAGTGTTGAATCAGCTGCGAAACTAAACATTCCAAGGATTTACTATTACAGCTCAAGTTACTTCTCCAACTGTGCCTTCCATTTTATCATGAAGTATAGACCTCATGATAATTTAGTTTCTGATACACAGAAATTTACTATTCCTTGTTTTCCTCATACAATTGAGATGACTCCTCTGCAGCTTCCTGATTGGTTAAGGACAAAGAATTCTGCCCCTTCCTTTTTTGAACAAGTGTTTGAATCGGAAAAAAAAAGTTATGGAACACTATACAATAGTTTTCATGAACTTGAAAGTGATTATGAGAAACTTAGTCAAACTACAATGGGAATCAAATCTTGGAGTGTAGGACCAGTTTCAGCTTGGGTTAACAAGAATGATGAAAGAAAGATTAATAGGGGACACATGGAGAACAACTTTGGAAAAGAGACAGAATTGCTAAATTGGCTTAACTCAAAGCAAAATGAGTCTGTATTGTACGTAAGTTTTGGCAGCCTTGTTTGGCATCCTTATGCTCAACTTGTAGAAATTGCACACGGTCTTGAAAATTCATGTCATAATTTTATCTGGGTCGTACGAAAGTATGATAGAGATGAGGATGAAGATGGTTTCCTGCAAACATTTGAGGAAAGGTTGAAAAAAAGCAGAAAGGGCTATATCATATGGGATTGGGCACCGCAACTTCTGATATTGGACCACCCTGCAACAGGAGGGATTGTGACTCACTGTGGTTGGAACTCAATTCTCGAAAGCTTGAATGCTGGTTTGCCAATGATCACATGGCCCATTTTTGCTGAGCAATTTAACAATGAGAAGTTTCTTGTTGATGTTTTGAAGATTGGAGTTTCTGTTGGATCAAAAGAGAACGAGTTTTGGAATAGAATTAGTGTAGTGGCAATTGTGAGAAGGGAAGAGATTGCAAAGGCTGTTGAGATTTTGATGGGAAGTGGACAAGAGAGCAAAGAAATGAGAATGAAAGCTAAAAAGCTTGGCGATGCTGCCAAGAGGACTATTGAGGAAGGTGGACACTCTTACAACAACTTGACTCAGTTGATTGATGAACTGAAATCATTGAAGAAATCCAAAGAACTTGGTGAGAAAGCAGATTAG

Protein sequence

>Msa1064500

MESQSQQSNNQLHVIFLPYPTPGHMNPMIDTARLFAKHGVNVTIITTHANASTFQKSIDSDFNSGYLIKTQLIQFPSAQVGLPDGVENFKHGTSLEMLGKISRAIPMLQDSIEVLFQELQPDCIVTDMLYPWSVESAAKLNIPRIYYYSSSYFSNCAFHFIMKYRPHDNLVSDTQKFTIPCFPHTIEMTPLQLPDWLRTKNSAPSFFEQVFESEKKSYGTLYNSFHELESDYEKLSQTTMGIKSWSVGPVSAWVNKNDERKINRGHMENNFGKETELLNWLNSKQNESVLYVSFGSLVWHPYAQLVEIAHGLENSCHNFIWVVRKYDRDEDEDGFLQTFEERLKKSRKGYIIWDWAPQLLILDHPATGGIVTHCGWNSILESLNAGLPMITWPIFAEQFNNEKFLVDVLKIGVSVGSKENEFWNRISVVAIVRREEIAKAVEILMGSGQESKEMRMKAKKLGDAAKRTIEEGGHSYNNLTQLIDELKSLKKSKELGEKAD*