Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275770 | XP_003627161.1 | 88.073 | 109 | 8 | 2 | 1 | 109 | 1 | 104 | 3.04e-58 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275770 | G7LI87 | 88.073 | 109 | 8 | 2 | 1 | 109 | 1 | 104 | 1.45e-58 | 184 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011720 | Msa1275770 | 0.830435 | 2.941365e-55 | -8.615850e-47 |
| Msa0071240 | Msa1275770 | 0.812261 | 4.634000e-51 | -8.615850e-47 |
| Msa0092990 | Msa1275770 | 0.824398 | 8.247189e-54 | -8.615850e-47 |
| Msa0105340 | Msa1275770 | 0.814133 | 1.799117e-51 | -8.615850e-47 |
| Msa0105700 | Msa1275770 | 0.808476 | 3.040296e-50 | -8.615850e-47 |
| Msa0111310 | Msa1275770 | 0.824629 | 7.277602e-54 | -8.615850e-47 |
| Msa0115810 | Msa1275770 | 0.803086 | 4.122399e-49 | -8.615850e-47 |
| Msa0120340 | Msa1275770 | 0.808409 | 3.141567e-50 | -8.615850e-47 |
| Msa0607540 | Msa1275770 | 0.816097 | 6.591171e-52 | -8.615850e-47 |
| Msa0610370 | Msa1275770 | 0.800152 | 1.647561e-48 | -8.615850e-47 |
| Msa0610590 | Msa1275770 | 0.812681 | 3.751788e-51 | -8.615850e-47 |
| Msa0621590 | Msa1275770 | 0.849709 | 2.717622e-60 | -8.615850e-47 |
| Msa0637070 | Msa1275770 | 0.842254 | 2.892251e-58 | -8.615850e-47 |
| Msa0638280 | Msa1275770 | 0.832126 | 1.129175e-55 | -8.615850e-47 |
| Msa0638320 | Msa1275770 | 0.831771 | 1.381736e-55 | -8.615850e-47 |
| Msa0647450 | Msa1275770 | -0.802710 | 4.929401e-49 | -8.615850e-47 |
| Msa0647830 | Msa1275770 | 0.814724 | 1.331799e-51 | -8.615850e-47 |
| Msa0649970 | Msa1275770 | 0.830744 | 2.472074e-55 | -8.615850e-47 |
| Msa0650900 | Msa1275770 | 0.812291 | 4.565532e-51 | -8.615850e-47 |
| Msa0651190 | Msa1275770 | 0.816641 | 4.981458e-52 | -8.615850e-47 |
| Msa0657970 | Msa1275770 | 0.816335 | 5.831822e-52 | -8.615850e-47 |
| Msa0660300 | Msa1275770 | 0.820773 | 5.745305e-53 | -8.615850e-47 |
| Msa0661870 | Msa1275770 | 0.806481 | 8.055345e-50 | -8.615850e-47 |
| Msa0662650 | Msa1275770 | 0.832345 | 9.968742e-56 | -8.615850e-47 |
| Msa0663710 | Msa1275770 | 0.800752 | 1.243915e-48 | -8.615850e-47 |
| Msa0671180 | Msa1275770 | 0.804816 | 1.801487e-49 | -8.615850e-47 |
| Msa0677270 | Msa1275770 | 0.830715 | 2.512423e-55 | -8.615850e-47 |
| Msa0678820 | Msa1275770 | 0.818355 | 2.046833e-52 | -8.615850e-47 |
| Msa0690440 | Msa1275770 | 0.814169 | 1.766973e-51 | -8.615850e-47 |
| Msa0693380 | Msa1275770 | 0.812427 | 4.262871e-51 | -8.615850e-47 |
| Msa0694250 | Msa1275770 | 0.817242 | 3.650780e-52 | -8.615850e-47 |
| Msa0697140 | Msa1275770 | 0.817138 | 3.852515e-52 | -8.615850e-47 |
| Msa0706370 | Msa1275770 | 0.824628 | 7.280361e-54 | -8.615850e-47 |
| Msa0708860 | Msa1275770 | 0.828660 | 7.944629e-55 | -8.615850e-47 |
| Msa0715720 | Msa1275770 | 0.807563 | 4.755794e-50 | -8.615850e-47 |
| Msa0722930 | Msa1275770 | 0.813470 | 2.518431e-51 | -8.615850e-47 |
| Msa0723140 | Msa1275770 | 0.815665 | 8.228559e-52 | -8.615850e-47 |
| Msa0731180 | Msa1275770 | 0.800113 | 1.678564e-48 | -8.615850e-47 |
| Msa0743260 | Msa1275770 | 0.814218 | 1.723369e-51 | -8.615850e-47 |
| Msa0750350 | Msa1275770 | 0.807744 | 4.352281e-50 | -8.615850e-47 |
| Msa0757080 | Msa1275770 | 0.818651 | 1.754212e-52 | -8.615850e-47 |
| Msa0771720 | Msa1275770 | 0.808468 | 3.052122e-50 | -8.615850e-47 |
| Msa0789270 | Msa1275770 | 0.807753 | 4.333213e-50 | -8.615850e-47 |
| Msa0789280 | Msa1275770 | 0.805106 | 1.566760e-49 | -8.615850e-47 |
| Msa0789290 | Msa1275770 | 0.807792 | 4.251034e-50 | -8.615850e-47 |
| Msa0789300 | Msa1275770 | 0.805814 | 1.112966e-49 | -8.615850e-47 |
| Msa0791070 | Msa1275770 | 0.800008 | 1.762820e-48 | -8.615850e-47 |
| Msa0795080 | Msa1275770 | 0.810973 | 8.832630e-51 | -8.615850e-47 |
| Msa0815320 | Msa1275770 | 0.811040 | 8.539303e-51 | -8.615850e-47 |
| Msa0839330 | Msa1275770 | 0.803020 | 4.255032e-49 | -8.615850e-47 |
| Msa0121620 | Msa1275770 | 0.806421 | 8.295532e-50 | -8.615850e-47 |
| Msa0140390 | Msa1275770 | 0.804938 | 1.698787e-49 | -8.615850e-47 |
| Msa0147920 | Msa1275770 | 0.804004 | 2.660131e-49 | -8.615850e-47 |
| Msa0152170 | Msa1275770 | 0.819742 | 9.897729e-53 | -8.615850e-47 |
| Msa0173990 | Msa1275770 | 0.806545 | 7.810969e-50 | -8.615850e-47 |
| Msa0178350 | Msa1275770 | 0.800886 | 1.167892e-48 | -8.615850e-47 |
| Msa0185640 | Msa1275770 | -0.811692 | 6.165780e-51 | -8.615850e-47 |
| Msa0188630 | Msa1275770 | 0.817178 | 3.774102e-52 | -8.615850e-47 |
| Msa0195770 | Msa1275770 | 0.832829 | 7.559848e-56 | -8.615850e-47 |
| Msa0208630 | Msa1275770 | 0.803837 | 2.880521e-49 | -8.615850e-47 |
| Msa0217400 | Msa1275770 | 0.809126 | 2.206778e-50 | -8.615850e-47 |
| Msa0223290 | Msa1275770 | 0.808991 | 2.359480e-50 | -8.615850e-47 |
| Msa0223380 | Msa1275770 | 0.846032 | 2.801562e-59 | -8.615850e-47 |
| Msa0230770 | Msa1275770 | 0.812907 | 3.346641e-51 | -8.615850e-47 |
| Msa0233610 | Msa1275770 | 0.813658 | 2.290221e-51 | -8.615850e-47 |
| Msa0235190 | Msa1275770 | 0.825317 | 5.006075e-54 | -8.615850e-47 |
| Msa1233500 | Msa1275770 | 0.918245 | 1.976656e-86 | -8.615850e-47 |
| Msa1233890 | Msa1275770 | 0.851167 | 1.058864e-60 | -8.615850e-47 |
| Msa1244250 | Msa1275770 | 0.804691 | 1.913119e-49 | -8.615850e-47 |
| Msa1249490 | Msa1275770 | 0.804818 | 1.799781e-49 | -8.615850e-47 |
| Msa1252070 | Msa1275770 | 0.811311 | 7.459047e-51 | -8.615850e-47 |
| Msa1256540 | Msa1275770 | -0.809680 | 1.678567e-50 | -8.615850e-47 |
| Msa1271210 | Msa1275770 | 0.804769 | 1.842924e-49 | -8.615850e-47 |
| Msa1275770 | Msa1276440 | 0.806346 | 8.600771e-50 | -8.615850e-47 |
| Msa1275770 | Msa1279210 | 0.838775 | 2.353535e-57 | -8.615850e-47 |
| Msa1275770 | Msa1279650 | 0.802797 | 4.730617e-49 | -8.615850e-47 |
| Msa1275770 | Msa1280130 | 0.823538 | 1.312819e-53 | -8.615850e-47 |
| Msa1275770 | Msa1287560 | 0.801928 | 7.142311e-49 | -8.615850e-47 |
| Msa1275770 | Msa1288000 | 0.808737 | 2.673543e-50 | -8.615850e-47 |
| Msa1275770 | Msa1289280 | 0.805833 | 1.103082e-49 | -8.615850e-47 |
| Msa1275770 | Msa1296960 | -0.809316 | 2.009781e-50 | -8.615850e-47 |
| Msa1275770 | Msa1297090 | 0.817317 | 3.510828e-52 | -8.615850e-47 |
| Msa1275770 | Msa1300350 | -0.802930 | 4.439978e-49 | -8.615850e-47 |
| Msa1275770 | Msa1306750 | 0.822331 | 2.507846e-53 | -8.615850e-47 |
| Msa1275770 | Msa1307740 | 0.808743 | 2.666287e-50 | -8.615850e-47 |
| Msa1275770 | Msa1308590 | 0.831669 | 1.464247e-55 | -8.615850e-47 |
| Msa1275770 | Msa1308640 | 0.829669 | 4.524067e-55 | -8.615850e-47 |
| Msa1275770 | Msa1314340 | 0.818980 | 1.476617e-52 | -8.615850e-47 |
| Msa1275770 | Msa1316560 | -0.821731 | 3.454798e-53 | -8.615850e-47 |
| Msa1275770 | Msa1322190 | 0.809635 | 1.716450e-50 | -8.615850e-47 |
| Msa1275770 | Msa1328700 | 0.826588 | 2.498417e-54 | -8.615850e-47 |
| Msa1275770 | Msa1336490 | 0.806478 | 8.069106e-50 | -8.615850e-47 |
| Msa1275770 | Msa1340650 | 0.808674 | 2.758168e-50 | -8.615850e-47 |
| Msa1275770 | Msa1343320 | 0.804253 | 2.361024e-49 | -8.615850e-47 |
| Msa1275770 | Msa1348950 | 0.806071 | 9.829749e-50 | -8.615850e-47 |
| Msa1275770 | Msa1357530 | 0.805800 | 1.120643e-49 | -8.615850e-47 |
| Msa1275770 | Msa1362880 | 0.817940 | 2.540108e-52 | -8.615850e-47 |
| Msa1275770 | Msa1365040 | -0.803434 | 3.493359e-49 | -8.615850e-47 |
| Msa1275770 | Msa1369530 | 0.841783 | 3.853540e-58 | -8.615850e-47 |
| Msa1275770 | Msa1371580 | 0.807907 | 4.019004e-50 | -8.615850e-47 |
| Msa1275770 | Msa1379710 | 0.804820 | 1.798113e-49 | -8.615850e-47 |
| Msa1275770 | Msa1386430 | 0.801453 | 8.940486e-49 | -8.615850e-47 |
| Msa1275770 | Msa1396830 | 0.811314 | 7.449026e-51 | -8.615850e-47 |
| Msa1275770 | Msa1404670 | 0.830706 | 2.525607e-55 | -8.615850e-47 |
| Msa1275770 | Msa1408790 | 0.805996 | 1.019398e-49 | -8.615850e-47 |
| Msa1275770 | Msa1427830 | 0.802656 | 5.059399e-49 | -8.615850e-47 |
| Msa1275770 | Msa1436040 | 0.810370 | 1.192495e-50 | -8.615850e-47 |
| Msa1275770 | Msa1441190 | 0.817922 | 2.564311e-52 | -8.615850e-47 |
| Msa1275770 | Msa1444740 | 0.801566 | 8.474869e-49 | -8.615850e-47 |
| Msa1275770 | Msa1451620 | -0.825769 | 3.912774e-54 | -8.615850e-47 |
| Msa1275770 | Msa1453710 | 0.823686 | 1.211955e-53 | -8.615850e-47 |
| Msa1275770 | Msa1455390 | 0.832218 | 1.071595e-55 | -8.615850e-47 |
| Msa1275770 | Msa1457670 | -0.803717 | 3.051270e-49 | -8.615850e-47 |
| Msa1275770 | Msa1458550 | 0.841131 | 5.724369e-58 | -8.615850e-47 |
| Msa1275770 | Msa1461250 | -0.815594 | 8.535935e-52 | -8.615850e-47 |
| Msa1275770 | Msa1464940 | 0.822951 | 1.800003e-53 | -8.615850e-47 |
| Msa0365490 | Msa1275770 | 0.807898 | 4.035882e-50 | -8.615850e-47 |
| Msa0371420 | Msa1275770 | -0.803725 | 3.039487e-49 | -8.615850e-47 |
| Msa0373930 | Msa1275770 | 0.800434 | 1.443660e-48 | -8.615850e-47 |
| Msa0376590 | Msa1275770 | 0.801773 | 7.685288e-49 | -8.615850e-47 |
| Msa0379640 | Msa1275770 | 0.803810 | 2.918448e-49 | -8.615850e-47 |
| Msa0380040 | Msa1275770 | 0.806328 | 8.678963e-50 | -8.615850e-47 |
| Msa0389810 | Msa1275770 | 0.817430 | 3.311984e-52 | -8.615850e-47 |
| Msa0404030 | Msa1275770 | 0.811721 | 6.076396e-51 | -8.615850e-47 |
| Msa0426330 | Msa1275770 | 0.808981 | 2.371079e-50 | -8.615850e-47 |
| Msa0431690 | Msa1275770 | 0.809219 | 2.108094e-50 | -8.615850e-47 |
| Msa0442850 | Msa1275770 | 0.840900 | 6.580476e-58 | -8.615850e-47 |
| Msa0449760 | Msa1275770 | 0.818341 | 2.062404e-52 | -8.615850e-47 |
| Msa0452410 | Msa1275770 | 0.821347 | 4.238388e-53 | -8.615850e-47 |
| Msa0458310 | Msa1275770 | 0.824438 | 8.070587e-54 | -8.615850e-47 |
| Msa0458700 | Msa1275770 | 0.818012 | 2.447181e-52 | -8.615850e-47 |
| Msa0464900 | Msa1275770 | 0.813935 | 1.989090e-51 | -8.615850e-47 |
| Msa0465680 | Msa1275770 | -0.836716 | 7.949125e-57 | -8.615850e-47 |
| Msa0466060 | Msa1275770 | 0.802548 | 5.323633e-49 | -8.615850e-47 |
| Msa0466280 | Msa1275770 | 0.804736 | 1.871939e-49 | -8.615850e-47 |
| Msa0468130 | Msa1275770 | 0.814443 | 1.536763e-51 | -8.615850e-47 |
| Msa0473240 | Msa1275770 | 0.845318 | 4.377320e-59 | -8.615850e-47 |
| Msa0480320 | Msa1275770 | 0.802471 | 5.522221e-49 | -8.615850e-47 |
| Msa0480600 | Msa1275770 | 0.830379 | 3.036422e-55 | -8.615850e-47 |
| Msa0982270 | Msa1275770 | 0.824248 | 8.944802e-54 | -8.615850e-47 |
| Msa0992490 | Msa1275770 | -0.832392 | 9.703886e-56 | -8.615850e-47 |
| Msa0999040 | Msa1275770 | 0.817448 | 3.281321e-52 | -8.615850e-47 |
| Msa1000020 | Msa1275770 | 0.801082 | 1.064880e-48 | -8.615850e-47 |
| Msa1002300 | Msa1275770 | 0.825110 | 5.603807e-54 | -8.615850e-47 |
| Msa1006850 | Msa1275770 | 0.807727 | 4.388426e-50 | -8.615850e-47 |
| Msa1020720 | Msa1275770 | 0.808529 | 2.961028e-50 | -8.615850e-47 |
| Msa1021340 | Msa1275770 | 0.816547 | 5.228062e-52 | -8.615850e-47 |
| Msa1026760 | Msa1275770 | 0.825420 | 4.734807e-54 | -8.615850e-47 |
| Msa1026790 | Msa1275770 | 0.820720 | 5.907562e-53 | -8.615850e-47 |
| Msa1027290 | Msa1275770 | 0.812242 | 4.679113e-51 | -8.615850e-47 |
| Msa1036390 | Msa1275770 | 0.802973 | 4.349861e-49 | -8.615850e-47 |
| Msa1039880 | Msa1275770 | 0.827936 | 1.187935e-54 | -8.615850e-47 |
| Msa1043920 | Msa1275770 | 0.802750 | 4.838275e-49 | -8.615850e-47 |
| Msa1055430 | Msa1275770 | 0.807381 | 5.197504e-50 | -8.615850e-47 |
| Msa1064500 | Msa1275770 | 0.801567 | 8.470429e-49 | -8.615850e-47 |
| Msa1077950 | Msa1275770 | 0.807741 | 4.357767e-50 | -8.615850e-47 |
| Msa1082500 | Msa1275770 | 0.840203 | 1.001753e-57 | -8.615850e-47 |
| Msa1085920 | Msa1275770 | 0.800550 | 1.367166e-48 | -8.615850e-47 |
| Msa1087470 | Msa1275770 | 0.804899 | 1.731080e-49 | -8.615850e-47 |
| Msa1092090 | Msa1275770 | 0.826548 | 2.554347e-54 | -8.615850e-47 |
| Msa1095480 | Msa1275770 | 0.805757 | 1.144310e-49 | -8.615850e-47 |
| Msa1097430 | Msa1275770 | 0.806493 | 8.008395e-50 | -8.615850e-47 |
| Msa1100480 | Msa1275770 | 0.805779 | 1.132095e-49 | -8.615850e-47 |
| Msa1104610 | Msa1275770 | 0.805378 | 1.374153e-49 | -8.615850e-47 |
| Msa0243710 | Msa1275770 | 0.802314 | 5.950595e-49 | -8.615850e-47 |
| Msa0257250 | Msa1275770 | 0.800620 | 1.323450e-48 | -8.615850e-47 |
| Msa0258760 | Msa1275770 | 0.848518 | 5.825843e-60 | -8.615850e-47 |
| Msa0266000 | Msa1275770 | -0.814182 | 1.754611e-51 | -8.615850e-47 |
| Msa0269450 | Msa1275770 | 0.826686 | 2.366826e-54 | -8.615850e-47 |
| Msa0270270 | Msa1275770 | 0.833875 | 4.148269e-56 | -8.615850e-47 |
| Msa0274490 | Msa1275770 | 0.808150 | 3.568098e-50 | -8.615850e-47 |
| Msa0282250 | Msa1275770 | 0.802465 | 5.539024e-49 | -8.615850e-47 |
| Msa0288330 | Msa1275770 | 0.800438 | 1.440922e-48 | -8.615850e-47 |
| Msa0296160 | Msa1275770 | 0.816960 | 4.223025e-52 | -8.615850e-47 |
| Msa0296560 | Msa1275770 | 0.801784 | 7.644944e-49 | -8.615850e-47 |
| Msa0305890 | Msa1275770 | 0.801518 | 8.671411e-49 | -8.615850e-47 |
| Msa0323080 | Msa1275770 | 0.841551 | 4.437258e-58 | -8.615850e-47 |
| Msa0323620 | Msa1275770 | 0.805676 | 1.189813e-49 | -8.615850e-47 |
| Msa0326670 | Msa1275770 | 0.822455 | 2.346784e-53 | -8.615850e-47 |
| Msa0331920 | Msa1275770 | 0.809730 | 1.637721e-50 | -8.615850e-47 |
| Msa0333720 | Msa1275770 | -0.804825 | 1.793999e-49 | -8.615850e-47 |
| Msa0334570 | Msa1275770 | 0.816943 | 4.261495e-52 | -8.615850e-47 |
| Msa0335040 | Msa1275770 | 0.829151 | 6.042282e-55 | -8.615850e-47 |
| Msa0340810 | Msa1275770 | 0.801279 | 9.705180e-49 | -8.615850e-47 |
| Msa0342340 | Msa1275770 | -0.809804 | 1.578523e-50 | -8.615850e-47 |
| Msa0344830 | Msa1275770 | 0.850085 | 2.133284e-60 | -8.615850e-47 |
| Msa0344870 | Msa1275770 | 0.818940 | 1.508208e-52 | -8.615850e-47 |
| Msa0347360 | Msa1275770 | 0.815303 | 9.907663e-52 | -8.615850e-47 |
| Msa0350670 | Msa1275770 | 0.819924 | 8.993041e-53 | -8.615850e-47 |
| Msa0350990 | Msa1275770 | 0.801368 | 9.307620e-49 | -8.615850e-47 |
| Msa1137600 | Msa1275770 | 0.804713 | 1.893177e-49 | -8.615850e-47 |
| Msa1139410 | Msa1275770 | 0.801433 | 9.024231e-49 | -8.615850e-47 |
| Msa1142500 | Msa1275770 | 0.800646 | 1.307336e-48 | -8.615850e-47 |
| Msa1151710 | Msa1275770 | 0.814452 | 1.529315e-51 | -8.615850e-47 |
| Msa1154160 | Msa1275770 | 0.806743 | 7.092351e-50 | -8.615850e-47 |
| Msa1172230 | Msa1275770 | 0.802556 | 5.305760e-49 | -8.615850e-47 |
| Msa1198090 | Msa1275770 | 0.805439 | 1.334384e-49 | -8.615850e-47 |
| Msa1199560 | Msa1275770 | 0.829799 | 4.205369e-55 | -8.615850e-47 |
| Msa1204980 | Msa1275770 | -0.817427 | 3.316251e-52 | -8.615850e-47 |
| Msa1205010 | Msa1275770 | -0.825536 | 4.444506e-54 | -8.615850e-47 |
| Msa1205130 | Msa1275770 | 0.837674 | 4.521448e-57 | -8.615850e-47 |
| Msa1206020 | Msa1275770 | 0.800669 | 1.292949e-48 | -8.615850e-47 |
| Msa0484780 | Msa1275770 | 0.831863 | 1.311244e-55 | -8.615850e-47 |
| Msa0490350 | Msa1275770 | 0.816682 | 4.875717e-52 | -8.615850e-47 |
| Msa0508200 | Msa1275770 | 0.813405 | 2.602706e-51 | -8.615850e-47 |
| Msa0512900 | Msa1275770 | 0.800717 | 1.264521e-48 | -8.615850e-47 |
| Msa0516370 | Msa1275770 | 0.800234 | 1.585731e-48 | -8.615850e-47 |
| Msa0524890 | Msa1275770 | -0.819178 | 1.330882e-52 | -8.615850e-47 |
| Msa0527250 | Msa1275770 | 0.808344 | 3.243570e-50 | -8.615850e-47 |
| Msa0528970 | Msa1275770 | 0.804324 | 2.281954e-49 | -8.615850e-47 |
| Msa0533290 | Msa1275770 | 0.808170 | 3.532257e-50 | -8.615850e-47 |
| Msa0535030 | Msa1275770 | 0.800247 | 1.575915e-48 | -8.615850e-47 |
| Msa0535060 | Msa1275770 | 0.806195 | 9.256550e-50 | -8.615850e-47 |
| Msa0540070 | Msa1275770 | 0.828380 | 9.286371e-55 | -8.615850e-47 |
| Msa0543900 | Msa1275770 | 0.802660 | 5.048369e-49 | -8.615850e-47 |
| Msa0553460 | Msa1275770 | 0.817737 | 2.823242e-52 | -8.615850e-47 |
| Msa0556240 | Msa1275770 | 0.803375 | 3.592541e-49 | -8.615850e-47 |
| Msa0558690 | Msa1275770 | 0.806710 | 7.208847e-50 | -8.615850e-47 |
| Msa0562440 | Msa1275770 | 0.826438 | 2.713292e-54 | -8.615850e-47 |
| Msa0568240 | Msa1275770 | 0.802032 | 6.800901e-49 | -8.615850e-47 |
| Msa0578970 | Msa1275770 | 0.811959 | 5.393056e-51 | -8.615850e-47 |
| Msa0585700 | Msa1275770 | 0.811351 | 7.313477e-51 | -8.615850e-47 |
| Msa0594430 | Msa1275770 | 0.801257 | 9.806499e-49 | -8.615850e-47 |
| Msa0598460 | Msa1275770 | 0.801235 | 9.909719e-49 | -8.615850e-47 |
| Msa0599580 | Msa1275770 | 0.819427 | 1.168381e-52 | -8.615850e-47 |
| Msa0599770 | Msa1275770 | 0.813030 | 3.145144e-51 | -8.615850e-47 |
| Msa0599890 | Msa1275770 | 0.828334 | 9.522255e-55 | -8.615850e-47 |
| Msa0843280 | Msa1275770 | 0.812073 | 5.092287e-51 | -8.615850e-47 |
| Msa0844900 | Msa1275770 | 0.809653 | 1.700916e-50 | -8.615850e-47 |
| Msa0847200 | Msa1275770 | 0.818638 | 1.765463e-52 | -8.615850e-47 |
| Msa0860410 | Msa1275770 | 0.809423 | 1.905883e-50 | -8.615850e-47 |
| Msa0860430 | Msa1275770 | 0.812974 | 3.236234e-51 | -8.615850e-47 |
| Msa0870620 | Msa1275770 | 0.831826 | 1.339096e-55 | -8.615850e-47 |
| Msa0870690 | Msa1275770 | 0.803824 | 2.898633e-49 | -8.615850e-47 |
| Msa0883370 | Msa1275770 | 0.813121 | 3.003895e-51 | -8.615850e-47 |
| Msa0891040 | Msa1275770 | 0.806255 | 8.987916e-50 | -8.615850e-47 |
| Msa0898350 | Msa1275770 | 0.812987 | 3.214761e-51 | -8.615850e-47 |
| Msa0898370 | Msa1275770 | 0.839261 | 1.761663e-57 | -8.615850e-47 |
| Msa0899230 | Msa1275770 | 0.803513 | 3.363664e-49 | -8.615850e-47 |
| Msa0908170 | Msa1275770 | 0.819430 | 1.166154e-52 | -8.615850e-47 |
| Msa0910980 | Msa1275770 | -0.827945 | 1.181736e-54 | -8.615850e-47 |
| Msa0927670 | Msa1275770 | 0.814510 | 1.485418e-51 | -8.615850e-47 |
| Msa0936270 | Msa1275770 | 0.807181 | 5.730224e-50 | -8.615850e-47 |
| Msa0951720 | Msa1275770 | 0.800389 | 1.474824e-48 | -8.615850e-47 |
| Msa0960160 | Msa1275770 | 0.805883 | 1.076404e-49 | -8.615850e-47 |
| Msa0961420 | Msa1275770 | -0.820202 | 7.767624e-53 | -8.615850e-47 |
| Msa0965520 | Msa1275770 | 0.805693 | 1.179921e-49 | -8.615850e-47 |
| Msa0965750 | Msa1275770 | 0.830782 | 2.419392e-55 | -8.615850e-47 |
| Msa0976250 | Msa1275770 | 0.805190 | 1.504466e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275770 | MtrunA17_Chr8g0342841 | 88.073 | 109 | 8 | 2 | 1 | 109 | 1 | 104 | 2.80e-62 | 184 |
| Msa1275770 | MtrunA17_Chr8g0342831 | 88.073 | 109 | 8 | 2 | 1 | 109 | 1 | 104 | 2.80e-62 | 184 |
| Msa1275770 | MtrunA17_Chr2g0329951 | 64.815 | 108 | 31 | 4 | 1 | 107 | 1 | 102 | 1.87e-38 | 124 |
| Msa1275770 | MtrunA17_Chr4g0071001 | 52.066 | 121 | 40 | 4 | 2 | 108 | 3 | 119 | 1.02e-29 | 103 |
| Msa1275770 | MtrunA17_Chr3g0135901 | 54.717 | 106 | 42 | 3 | 4 | 108 | 6 | 106 | 1.48e-18 | 74.3 |
| Msa1275770 | MtrunA17_Chr7g0269811 | 65.217 | 46 | 16 | 0 | 63 | 108 | 42 | 87 | 6.02e-17 | 69.7 |
| Msa1275770 | MtrunA17_Chr1g0195031 | 54.000 | 50 | 23 | 0 | 59 | 108 | 53 | 102 | 3.65e-16 | 68.2 |
| Msa1275770 | MtrunA17_Chr1g0151181 | 72.222 | 36 | 10 | 0 | 68 | 103 | 74 | 109 | 6.74e-13 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275770 | AT5G11970.1 | 43.810 | 105 | 49 | 3 | 4 | 108 | 6 | 100 | 8.09e-20 | 77.8 |
| Msa1275770 | AT2G19460.1 | 43.590 | 117 | 51 | 6 | 2 | 108 | 3 | 114 | 1.29e-18 | 75.1 |
| Msa1275770 | AT2G19460.2 | 43.478 | 115 | 54 | 5 | 2 | 108 | 55 | 166 | 2.92e-18 | 75.5 |
| Msa1275770 | AT3G13910.1 | 59.016 | 61 | 22 | 1 | 48 | 105 | 39 | 99 | 4.32e-16 | 68.2 |
| Msa1275770 | AT3G13910.2 | 56.250 | 64 | 25 | 1 | 48 | 108 | 39 | 102 | 5.11e-16 | 68.6 |
| Msa1275770 | AT1G72720.1 | 38.095 | 126 | 59 | 6 | 3 | 109 | 2 | 127 | 9.23e-13 | 60.5 |
| Msa1275770 | AT2G47480.1 | 45.000 | 60 | 33 | 0 | 49 | 108 | 47 | 106 | 2.95e-12 | 58.5 |
| Msa1275770 | AT3G05725.1 | 35.780 | 109 | 53 | 4 | 16 | 108 | 13 | 120 | 7.80e-12 | 57.8 |
Find 10 sgRNAs with CRISPR-Local
Find 16 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCAATTATCACCATAAT+TGG | 0.252461 | 8_3:+9928881 | None:intergenic |
| ACTTTGATCCTTGCATGATT+TGG | 0.271027 | 8_3:+9929185 | None:intergenic |
| AGAACACGTGCAGCCAATTA+TGG | 0.311974 | 8_3:-9928894 | Msa1275770:CDS |
| CTCAGATCTTGCATGCTTGA+TGG | 0.343477 | 8_3:+9929126 | None:intergenic |
| CAGAGAAAGAAAAGAGTAGC+TGG | 0.442245 | 8_3:-9928982 | Msa1275770:CDS |
| TTGCAGATTGAAAGCTATAG+TGG | 0.472998 | 8_3:-9929162 | Msa1275770:CDS |
| TATAAAGTATATGATGTTGA+AGG | 0.535495 | 8_3:-9928958 | Msa1275770:CDS |
| TGTTATAGTACAAATTATGA+TGG | 0.558074 | 8_3:-9929099 | Msa1275770:CDS |
| CAGATTGAAAGCTATAGTGG+TGG | 0.602253 | 8_3:-9929159 | Msa1275770:CDS |
| ATTCAGATCCAAATCATGCA+AGG | 0.617513 | 8_3:-9929193 | Msa1275770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTATAGTACAAATTATGA+TGG | - | chr8_3:9928990-9929009 | Msa1275770:CDS | 20.0% |
| !! | TATAAAGTATATGATGTTGA+AGG | - | chr8_3:9929131-9929150 | Msa1275770:CDS | 20.0% |
| !!! | ATCAGATTTTGATCAAAACA+AGG | - | chr8_3:9929019-9929038 | Msa1275770:CDS | 25.0% |
| ! | ATGTTGAAGGAAAAATGAAA+GGG | - | chr8_3:9929144-9929163 | Msa1275770:CDS | 25.0% |
| ! | TTAGCAAAGCATCAAAAAGT+TGG | - | chr8_3:9929063-9929082 | Msa1275770:CDS | 30.0% |
| GATGTTGAAGGAAAAATGAA+AGG | - | chr8_3:9929143-9929162 | Msa1275770:CDS | 30.0% | |
| !! | GGTCTTTTAAGAAGAGTTTA+AGG | - | chr8_3:9929165-9929184 | Msa1275770:CDS | 30.0% |
| !! | CTTTTAAGAAGAGTTTAAGG+TGG | - | chr8_3:9929168-9929187 | Msa1275770:CDS | 30.0% |
| ATTCAGATCCAAATCATGCA+AGG | - | chr8_3:9928896-9928915 | Msa1275770:CDS | 35.0% | |
| ACTTTGATCCTTGCATGATT+TGG | + | chr8_3:9928907-9928926 | None:intergenic | 35.0% | |
| TTGCAGATTGAAAGCTATAG+TGG | - | chr8_3:9928927-9928946 | Msa1275770:CDS | 35.0% | |
| CAGATTGAAAGCTATAGTGG+TGG | - | chr8_3:9928930-9928949 | Msa1275770:CDS | 40.0% | |
| ! | CTTTTCTTTCTCTGCAACTC+TGG | + | chr8_3:9929101-9929120 | None:intergenic | 40.0% |
| CAGAGAAAGAAAAGAGTAGC+TGG | - | chr8_3:9929107-9929126 | Msa1275770:CDS | 40.0% | |
| CTCAGATCTTGCATGCTTGA+TGG | + | chr8_3:9928966-9928985 | None:intergenic | 45.0% | |
| AGAACACGTGCAGCCAATTA+TGG | - | chr8_3:9929195-9929214 | Msa1275770:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 9928891 | 9929220 | 9928891 | ID=Msa1275770;Name=Msa1275770 |
| chr8_3 | mRNA | 9928891 | 9929220 | 9928891 | ID=Msa1275770-mRNA-1;Parent=Msa1275770;Name=Msa1275770-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|-1|0|1|-1|1|1|0|109 |
| chr8_3 | exon | 9928891 | 9929220 | 9928891 | ID=Msa1275770-mRNA-1:exon:4142;Parent=Msa1275770-mRNA-1 |
| chr8_3 | CDS | 9928891 | 9929220 | 9928891 | ID=Msa1275770-mRNA-1:cds;Parent=Msa1275770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
