Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100270 | XP_024627228.1 | 98.921 | 278 | 3 | 0 | 1 | 278 | 1 | 278 | 0.0 | 578 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100270 | sp|Q8LGJ5|PCO2_ARATH | 60.364 | 275 | 100 | 4 | 1 | 271 | 1 | 270 | 1.05e-113 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100270 | G7KZU7 | 98.921 | 278 | 3 | 0 | 1 | 278 | 1 | 278 | 0.0 | 578 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0465680 | Msa1100270 | 0.801145 | 1.033631e-48 | -8.615850e-47 |
| Msa1000020 | Msa1100270 | -0.803951 | 2.727672e-49 | -8.615850e-47 |
| Msa1006160 | Msa1100270 | 0.964008 | 8.675914e-123 | -8.615850e-47 |
| Msa1041600 | Msa1100270 | 0.803217 | 3.873372e-49 | -8.615850e-47 |
| Msa1100270 | Msa1228160 | 0.836419 | 9.459755e-57 | -8.615850e-47 |
| Msa1100270 | Msa1451620 | 0.802346 | 5.859999e-49 | -8.615850e-47 |
| Msa1100270 | Msa1461810 | 0.810682 | 1.020657e-50 | -8.615850e-47 |
| Msa0900200 | Msa1100270 | -0.801754 | 7.757584e-49 | -8.615850e-47 |
| Msa0965520 | Msa1100270 | -0.811312 | 7.455356e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100270 | MtrunA17_Chr7g0216881 | 98.921 | 278 | 3 | 0 | 1 | 278 | 1 | 278 | 0.0 | 578 |
| Msa1100270 | MtrunA17_Chr6g0452941 | 66.078 | 283 | 87 | 3 | 1 | 278 | 1 | 279 | 5.23e-131 | 372 |
| Msa1100270 | MtrunA17_Chr6g0460971 | 45.522 | 268 | 135 | 5 | 3 | 265 | 17 | 278 | 5.30e-75 | 231 |
| Msa1100270 | MtrunA17_Chr7g0253891 | 48.148 | 243 | 116 | 6 | 30 | 265 | 29 | 268 | 3.21e-70 | 218 |
| Msa1100270 | MtrunA17_Chr2g0307681 | 40.613 | 261 | 136 | 6 | 26 | 271 | 9 | 265 | 2.77e-60 | 192 |
| Msa1100270 | MtrunA17_Chr2g0320221 | 42.678 | 239 | 112 | 7 | 45 | 270 | 5 | 231 | 2.02e-59 | 189 |
| Msa1100270 | MtrunA17_Chr4g0041281 | 41.250 | 240 | 115 | 8 | 45 | 270 | 5 | 232 | 3.30e-57 | 183 |
| Msa1100270 | MtrunA17_Chr2g0283961 | 39.662 | 237 | 117 | 9 | 45 | 265 | 4 | 230 | 1.50e-53 | 174 |
| Msa1100270 | MtrunA17_Chr5g0426531 | 37.657 | 239 | 115 | 5 | 41 | 265 | 2 | 220 | 2.85e-44 | 150 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100270 | AT5G39890.1 | 60.364 | 275 | 100 | 4 | 1 | 271 | 1 | 270 | 1.07e-114 | 331 |
| Msa1100270 | AT5G39890.2 | 61.411 | 241 | 85 | 3 | 1 | 238 | 1 | 236 | 3.04e-101 | 296 |
| Msa1100270 | AT5G15120.1 | 58.678 | 242 | 87 | 5 | 42 | 275 | 55 | 291 | 1.95e-97 | 288 |
| Msa1100270 | AT3G58670.2 | 43.103 | 232 | 115 | 5 | 45 | 265 | 5 | 230 | 1.34e-61 | 195 |
| Msa1100270 | AT3G58670.3 | 43.103 | 232 | 115 | 5 | 45 | 265 | 5 | 230 | 1.34e-61 | 195 |
| Msa1100270 | AT3G58670.1 | 43.103 | 232 | 115 | 5 | 45 | 265 | 5 | 230 | 1.34e-61 | 195 |
| Msa1100270 | AT2G42670.2 | 42.735 | 234 | 113 | 6 | 45 | 265 | 5 | 230 | 2.02e-59 | 189 |
| Msa1100270 | AT2G42670.1 | 41.810 | 232 | 117 | 6 | 45 | 265 | 5 | 229 | 4.93e-59 | 188 |
| Msa1100270 | AT1G18490.1 | 40.909 | 264 | 134 | 9 | 21 | 265 | 10 | 270 | 1.16e-57 | 186 |
| Msa1100270 | AT3G58670.4 | 49.091 | 165 | 80 | 2 | 102 | 265 | 26 | 187 | 9.41e-55 | 176 |
| Msa1100270 | AT2G42670.3 | 48.684 | 152 | 70 | 3 | 117 | 265 | 16 | 162 | 4.11e-45 | 150 |
Find 69 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATGCTTCGTTCTGTCTT+AGG | 0.222744 | 7_3:+29796137 | Msa1100270:CDS |
| AGAGGAAAACAGGGGAAAAC+AGG | 0.283862 | 7_3:-29795699 | None:intergenic |
| GGTTTCAAGCCAAGGTCTTC+TGG | 0.290037 | 7_3:-29798313 | None:intergenic |
| CCGTTGATATTGCTGAAATA+TGG | 0.332743 | 7_3:-29798343 | None:intergenic |
| AGAGTAAAACAGAGGAAAAC+AGG | 0.338424 | 7_3:-29795709 | None:intergenic |
| TGTGTTTGTTTAGAGAAATT+TGG | 0.375739 | 7_3:+29800422 | Msa1100270:three_prime_UTR |
| TGCACATCAAATCTTATGAT+TGG | 0.383008 | 7_3:+29798899 | Msa1100270:CDS |
| ATTTGTGCCAGCCCAGATTC+CGG | 0.383303 | 7_3:+29799505 | Msa1100270:intron |
| GTACAGCAGCTCAAAGACTA+TGG | 0.383324 | 7_3:+29800368 | Msa1100270:CDS |
| AGAAACATGGTTGAAAGAAA+AGG | 0.387921 | 7_3:+29795939 | Msa1100270:CDS |
| AGATGTCGCCGGTTCTTCCT+TGG | 0.395242 | 7_3:-29796011 | None:intergenic |
| ACAGGGGAAAACAGGGGAAA+TGG | 0.399554 | 7_3:-29795691 | None:intergenic |
| TAAATATGTACCTGGAAAGT+TGG | 0.418116 | 7_3:-29799723 | None:intergenic |
| TGCCACCATCATCAGGATAA+AGG | 0.418756 | 7_3:-29799589 | None:intergenic |
| ATTTCAATGTGTTGAGAAGA+AGG | 0.420225 | 7_3:-29796119 | None:intergenic |
| GAAACATGGTTGAAAGAAAA+GGG | 0.426062 | 7_3:+29795940 | Msa1100270:CDS |
| TACCTGGAAAGTTGGAAAAC+GGG | 0.436431 | 7_3:-29799715 | None:intergenic |
| TCGATCCTTTATCCTGATGA+TGG | 0.445483 | 7_3:+29799584 | Msa1100270:CDS |
| GTACCTGGAAAGTTGGAAAA+CGG | 0.456140 | 7_3:-29799716 | None:intergenic |
| CTTCCATCAGGATCAGAGTA+TGG | 0.461902 | 7_3:-29799668 | None:intergenic |
| TGCATGTTGCCACCATCATC+AGG | 0.462731 | 7_3:-29799596 | None:intergenic |
| ACTATTACTTGTAAACTCTC+AGG | 0.465714 | 7_3:-29800339 | None:intergenic |
| GCACATCAAATCTTATGATT+GGG | 0.469520 | 7_3:+29798900 | Msa1100270:CDS |
| TTGCTGAAATATGGCATGTC+CGG | 0.469806 | 7_3:-29798334 | None:intergenic |
| AGAAGACCTTGGCTTGAAAC+CGG | 0.474599 | 7_3:+29798315 | Msa1100270:CDS |
| AGGAAAAGAAAGACTATGAA+TGG | 0.478550 | 7_3:+29800298 | Msa1100270:CDS |
| ACATGAAACCAAGGAAGAAC+CGG | 0.479046 | 7_3:+29796003 | Msa1100270:CDS |
| GCAAGAAACAGTTTCTGAAC+CGG | 0.489263 | 7_3:-29796056 | None:intergenic |
| CCAGATTCCGGAGAAAAGAT+TGG | 0.489680 | 7_3:+29799517 | Msa1100270:CDS |
| TATGCACAATGCCTTCCATC+AGG | 0.503855 | 7_3:-29799680 | None:intergenic |
| GAAAAGATTGGCGAAAATCA+AGG | 0.514528 | 7_3:+29799529 | Msa1100270:CDS |
| GAAAAGGGTGTGTAAGAAAA+CGG | 0.521967 | 7_3:-29795759 | None:intergenic |
| ATCATAAGATTTGATGTGCA+TGG | 0.522282 | 7_3:-29798896 | None:intergenic |
| GAGGAAAACAGGGGAAAACA+GGG | 0.523501 | 7_3:-29795698 | None:intergenic |
| TTTCGCACTCATAAATGTGA+AGG | 0.537101 | 7_3:-29798387 | None:intergenic |
| ACCGGCGACATCTTCGTCGC+AGG | 0.541799 | 7_3:+29796021 | Msa1100270:CDS |
| CCTCCATACTCTGATCCTGA+TGG | 0.550286 | 7_3:+29799665 | Msa1100270:CDS |
| GGAATCAAGCCAGAAGACCT+TGG | 0.554306 | 7_3:+29798304 | Msa1100270:CDS |
| GACATCAGCAGGCAAGTCAC+CGG | 0.556152 | 7_3:-29798923 | None:intergenic |
| AGGAATAACCATACCAGAAG+AGG | 0.562233 | 7_3:+29800278 | Msa1100270:CDS |
| GATAAGAAAGAGATTCAAAG+AGG | 0.562874 | 7_3:-29795669 | None:intergenic |
| TCACTTTGTGAGACATCAGC+AGG | 0.570104 | 7_3:-29798934 | None:intergenic |
| TCACAATCACCCGGGAATGA+CGG | 0.574508 | 7_3:+29798849 | Msa1100270:CDS |
| AGTTGGAAAACGGGAAACTT+CGG | 0.575633 | 7_3:-29799706 | None:intergenic |
| ATCAAATCTTATGATTGGGC+CGG | 0.576035 | 7_3:+29798904 | Msa1100270:CDS |
| AATAACTGAAACAGCACCAA+AGG | 0.581852 | 7_3:-29800498 | None:intergenic |
| TAAAGGATCGAAGGATTGCA+TGG | 0.583409 | 7_3:-29799572 | None:intergenic |
| GCATGTCCGGTTTCAAGCCA+AGG | 0.589898 | 7_3:-29798321 | None:intergenic |
| TGAAGAGGAATTACTCCAGA+AGG | 0.596954 | 7_3:-29798829 | None:intergenic |
| TCCTGCGACGAAGATGTCGC+CGG | 0.602711 | 7_3:-29796022 | None:intergenic |
| AATTCCTCTTCACAATCACC+CGG | 0.602782 | 7_3:+29798840 | Msa1100270:CDS |
| GAGTAAAACAGAGGAAAACA+GGG | 0.605458 | 7_3:-29795708 | None:intergenic |
| TCATCAGGATAAAGGATCGA+AGG | 0.612179 | 7_3:-29799581 | None:intergenic |
| ATCCTTTATCCTGATGATGG+TGG | 0.618101 | 7_3:+29799587 | Msa1100270:CDS |
| AAGAACATCTAAAACAGCAC+AGG | 0.623070 | 7_3:-29799639 | None:intergenic |
| AATGGGAATTGAGAGAAACA+TGG | 0.626246 | 7_3:+29795926 | Msa1100270:exon |
| CCATATTTCAGCAATATCAA+CGG | 0.649313 | 7_3:+29798343 | Msa1100270:CDS |
| AGGAAAACAGGGGAAAACAG+GGG | 0.653372 | 7_3:-29795697 | None:intergenic |
| CATACTCTGATCCTGATGGA+AGG | 0.655222 | 7_3:+29799669 | Msa1100270:CDS |
| AGAGGAATTACTCCAGAAGG+TGG | 0.673932 | 7_3:-29798826 | None:intergenic |
| ATTCCCGGGTGATTGTGAAG+AGG | 0.676921 | 7_3:-29798844 | None:intergenic |
| CAGAAAACAGAGTAAAACAG+AGG | 0.677557 | 7_3:-29795717 | None:intergenic |
| TCGCAGGACGGAGATGACGC+CGG | 0.678075 | 7_3:+29796037 | Msa1100270:CDS |
| GCGACATCTTCGTCGCAGGA+CGG | 0.680520 | 7_3:+29796025 | Msa1100270:CDS |
| ATATCAATAACATGAAACCA+AGG | 0.683143 | 7_3:+29795994 | Msa1100270:CDS |
| CCATCAGGATCAGAGTATGG+AGG | 0.686871 | 7_3:-29799665 | None:intergenic |
| TATTTCAGCAATATCAACGG+TGG | 0.692573 | 7_3:+29798346 | Msa1100270:CDS |
| ATTCCTCTTCACAATCACCC+GGG | 0.694001 | 7_3:+29798841 | Msa1100270:CDS |
| AGTAAAACAGAGGAAAACAG+GGG | 0.718743 | 7_3:-29795707 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTAAATTAATATTTT+AGG | + | chr7_3:29796709-29796728 | Msa1100270:intron | 0.0% |
| !!! | TTAATTAAATTAATATTTTA+GGG | + | chr7_3:29796710-29796729 | Msa1100270:intron | 0.0% |
| !! | TAATTATAAAAAAGCAAAAT+AGG | - | chr7_3:29796184-29796203 | None:intergenic | 10.0% |
| !!! | ATGGTTTATAATTTTATTTT+GGG | + | chr7_3:29796331-29796350 | Msa1100270:intron | 10.0% |
| !!! | AAATGTGATTTTATTTTATA+AGG | - | chr7_3:29796405-29796424 | None:intergenic | 10.0% |
| !!! | TTTTTTTCTTTATAAATTGT+AGG | + | chr7_3:29798036-29798055 | Msa1100270:intron | 10.0% |
| !!! | TTTTTTCTTTATAAATTGTA+GGG | + | chr7_3:29798037-29798056 | Msa1100270:intron | 10.0% |
| !! | AATTAAAATAAACGAAAATT+TGG | - | chr7_3:29798229-29798248 | None:intergenic | 10.0% |
| !!! | AGATATTTTAAAAAAGTAAA+CGG | - | chr7_3:29798428-29798447 | None:intergenic | 10.0% |
| !!! | TTACTTTTTTAAAATATCTT+CGG | + | chr7_3:29798429-29798448 | Msa1100270:intron | 10.0% |
| !! | AAATGAATTAATAAAGTAAA+TGG | + | chr7_3:29798623-29798642 | Msa1100270:intron | 10.0% |
| !!! | TAATCTAATAAATTTGTTTA+TGG | + | chr7_3:29798708-29798727 | Msa1100270:intron | 10.0% |
| !!! | ACTTTTATTATATTATAGAA+GGG | - | chr7_3:29798991-29799010 | None:intergenic | 10.0% |
| !!! | TACTTTTATTATATTATAGA+AGG | - | chr7_3:29798992-29799011 | None:intergenic | 10.0% |
| !!! | ATAAATTTGGATTTAAAATT+GGG | - | chr7_3:29799294-29799313 | None:intergenic | 10.0% |
| !!! | TATAAATTTGGATTTAAAAT+TGG | - | chr7_3:29799295-29799314 | None:intergenic | 10.0% |
| !!! | TATAATTACCCTTTTTTAAA+TGG | + | chr7_3:29796196-29796215 | Msa1100270:intron | 15.0% |
| !! | TGAAAAAACCATTTAAAAAA+GGG | - | chr7_3:29796207-29796226 | None:intergenic | 15.0% |
| !! | TTGAAAAAACCATTTAAAAA+AGG | - | chr7_3:29796208-29796227 | None:intergenic | 15.0% |
| !!! | TTTTAAATGGTTTTTTCAAT+TGG | + | chr7_3:29796209-29796228 | Msa1100270:intron | 15.0% |
| !!! | TTTAAATGGTTTTTTCAATT+GGG | + | chr7_3:29796210-29796229 | Msa1100270:intron | 15.0% |
| !!! | TCATATTTTAGTTGAAAATT+TGG | + | chr7_3:29796236-29796255 | Msa1100270:intron | 15.0% |
| !!! | GATGGTTTATAATTTTATTT+TGG | + | chr7_3:29796330-29796349 | Msa1100270:intron | 15.0% |
| !! | CAAAATTGTGAATATTTATA+GGG | - | chr7_3:29796374-29796393 | None:intergenic | 15.0% |
| !! | ACAAAATTGTGAATATTTAT+AGG | - | chr7_3:29796375-29796394 | None:intergenic | 15.0% |
| !!! | AAAATTTCTATCAACATTTT+TGG | - | chr7_3:29796465-29796484 | None:intergenic | 15.0% |
| !!! | TGTTGATAGAAATTTTTTAT+AGG | + | chr7_3:29796469-29796488 | Msa1100270:intron | 15.0% |
| !!! | GTTGATAGAAATTTTTTATA+GGG | + | chr7_3:29796470-29796489 | Msa1100270:intron | 15.0% |
| !! | AAGTCTCATAAAAAATAAAA+GGG | - | chr7_3:29796626-29796645 | None:intergenic | 15.0% |
| !! | AAAGTCTCATAAAAAATAAA+AGG | - | chr7_3:29796627-29796646 | None:intergenic | 15.0% |
| !!! | ATTTTAATTCAGCATAAAAT+TGG | + | chr7_3:29796824-29796843 | Msa1100270:intron | 15.0% |
| !!! | GATATTTTAAAAAAGTAAAC+GGG | - | chr7_3:29798427-29798446 | None:intergenic | 15.0% |
| !! | TTAAAAGATGTAAAATAAAG+TGG | + | chr7_3:29798551-29798570 | Msa1100270:intron | 15.0% |
| !! | TTTAAATCCAAATTTATATG+TGG | + | chr7_3:29799297-29799316 | Msa1100270:intron | 15.0% |
| !! | TTACTTTCTCAAATTATTAT+TGG | - | chr7_3:29800020-29800039 | None:intergenic | 15.0% |
| !! | AATAAAAAAAATTATCTGCA+AGG | + | chr7_3:29800569-29800588 | Msa1100270:three_prime_UTR | 15.0% |
| !!! | AGAATTGAATTTTGAGAAAA+GGG | - | chr7_3:29795777-29795796 | None:intergenic | 20.0% |
| !!! | TTTGATTCGTTTTTCTTATT+TGG | + | chr7_3:29795846-29795865 | Msa1100270:five_prime_UTR | 20.0% |
| !!! | TTGATTCGTTTTTCTTATTT+GGG | + | chr7_3:29795847-29795866 | Msa1100270:five_prime_UTR | 20.0% |
| !!! | TTAGGTATAATCCTTTTTTA+TGG | + | chr7_3:29796155-29796174 | Msa1100270:intron | 20.0% |
| !! | AAAATAGGAAACCATAAAAA+AGG | - | chr7_3:29796169-29796188 | None:intergenic | 20.0% |
| !!! | ACATTTTTCTTAAGCATTTT+AGG | + | chr7_3:29796437-29796456 | Msa1100270:intron | 20.0% |
| !!! | CATTTTTCTTAAGCATTTTA+GGG | + | chr7_3:29796438-29796457 | Msa1100270:intron | 20.0% |
| !!! | AAAGTGTGATTTTATTTTAC+AGG | + | chr7_3:29796561-29796580 | Msa1100270:intron | 20.0% |
| !!! | AAGTGTGATTTTATTTTACA+GGG | + | chr7_3:29796562-29796581 | Msa1100270:intron | 20.0% |
| !!! | AAGCAATAAATGTGTTTTTT+TGG | + | chr7_3:29796784-29796803 | Msa1100270:intron | 20.0% |
| !! | TATTATTGATAAATGAGTGA+AGG | - | chr7_3:29796867-29796886 | None:intergenic | 20.0% |
| !! | TCACTCATTTATCAATAATA+AGG | + | chr7_3:29796867-29796886 | Msa1100270:intron | 20.0% |
| !! | CACTCATTTATCAATAATAA+GGG | + | chr7_3:29796868-29796887 | Msa1100270:intron | 20.0% |
| !! | TAAAGTACACTTCTAAATTA+GGG | - | chr7_3:29797098-29797117 | None:intergenic | 20.0% |
| !! | TTAAAGTACACTTCTAAATT+AGG | - | chr7_3:29797099-29797118 | None:intergenic | 20.0% |
| !! | TTTAAACAGTACAAATTGTT+GGG | + | chr7_3:29797114-29797133 | Msa1100270:intron | 20.0% |
| !! | GTATATATAAACTTAAGTCA+TGG | + | chr7_3:29797188-29797207 | Msa1100270:intron | 20.0% |
| !! | TTTGTTGAAGATAAATTTGA+TGG | + | chr7_3:29797435-29797454 | Msa1100270:intron | 20.0% |
| !! | AAACACATAATTTAATGTGA+TGG | + | chr7_3:29797496-29797515 | Msa1100270:intron | 20.0% |
| !!! | CACTCTTATCTTATAATTTT+GGG | - | chr7_3:29797650-29797669 | None:intergenic | 20.0% |
| !!! | ACACTCTTATCTTATAATTT+TGG | - | chr7_3:29797651-29797670 | None:intergenic | 20.0% |
| !! | AATAAACTAGTACTATTTGT+AGG | + | chr7_3:29798000-29798019 | Msa1100270:intron | 20.0% |
| !!! | TTCTTTTTTCTTTTGAGAAA+TGG | + | chr7_3:29798148-29798167 | Msa1100270:intron | 20.0% |
| !! | ATTATTGATCAAATCATTCT+TGG | - | chr7_3:29798201-29798220 | None:intergenic | 20.0% |
| !! | AGTTAAAATCTTAACTATCA+TGG | - | chr7_3:29798263-29798282 | None:intergenic | 20.0% |
| !!! | AAAACAAATCTAGCATTTTT+AGG | - | chr7_3:29798532-29798551 | None:intergenic | 20.0% |
| !!! | TTTCAAGTTATGTTTACAAT+TGG | + | chr7_3:29798662-29798681 | Msa1100270:intron | 20.0% |
| !! | AAGATTAAAATTCAGTGATA+TGG | + | chr7_3:29799051-29799070 | Msa1100270:intron | 20.0% |
| !!! | ATGCACATTTTTAATCTAAT+TGG | + | chr7_3:29799213-29799232 | Msa1100270:intron | 20.0% |
| !! | ATTTCTTACAATTGTAACTT+TGG | + | chr7_3:29799325-29799344 | Msa1100270:intron | 20.0% |
| !!! | ACATAACTTAAATACACTTT+TGG | - | chr7_3:29799355-29799374 | None:intergenic | 20.0% |
| !!! | ATTTACCTAGTTTTAATGAA+TGG | + | chr7_3:29799741-29799760 | Msa1100270:intron | 20.0% |
| !! | TTAATCAAATAGTTGAAGTT+TGG | + | chr7_3:29799916-29799935 | Msa1100270:intron | 20.0% |
| !! | TTAGGATACATCATAATATA+TGG | - | chr7_3:29800153-29800172 | None:intergenic | 20.0% |
| !! | ATAGCGTAAATCATTATTTA+TGG | + | chr7_3:29800205-29800224 | Msa1100270:intron | 20.0% |
| !!! | AAAAAGATTCATTGCATTTT+AGG | - | chr7_3:29800243-29800262 | None:intergenic | 20.0% |
| !!! | TGAATCTTTTTTGAAATTTC+AGG | + | chr7_3:29800252-29800271 | Msa1100270:intron | 20.0% |
| !!! | GAGAATTGAATTTTGAGAAA+AGG | - | chr7_3:29795778-29795797 | None:intergenic | 25.0% |
| ! | ATATCAATAACATGAAACCA+AGG | + | chr7_3:29795994-29796013 | Msa1100270:CDS | 25.0% |
| !!! | AAAATTTGGACTAGTAATGA+AGG | + | chr7_3:29796250-29796269 | Msa1100270:intron | 25.0% |
| !!! | TTCCCTTCATTATTTTTGAT+AGG | + | chr7_3:29796307-29796326 | Msa1100270:intron | 25.0% |
| !!! | TCCCTTCATTATTTTTGATA+GGG | + | chr7_3:29796308-29796327 | Msa1100270:intron | 25.0% |
| ! | TCCCTATCAAAAATAATGAA+GGG | - | chr7_3:29796312-29796331 | None:intergenic | 25.0% |
| ! | ATCCCTATCAAAAATAATGA+AGG | - | chr7_3:29796313-29796332 | None:intergenic | 25.0% |
| !!! | TTCATTATTTTTGATAGGGA+TGG | + | chr7_3:29796312-29796331 | Msa1100270:intron | 25.0% |
| !! | TGCTAACGGAAAAATTTTAT+AGG | + | chr7_3:29796501-29796520 | Msa1100270:intron | 25.0% |
| !! | GCTAACGGAAAAATTTTATA+GGG | + | chr7_3:29796502-29796521 | Msa1100270:intron | 25.0% |
| !! | TGCTGATGGAAAATTTTATA+AGG | + | chr7_3:29796533-29796552 | Msa1100270:intron | 25.0% |
| !! | AATTAGGGTTTTTATAGTAG+TGG | - | chr7_3:29797083-29797102 | None:intergenic | 25.0% |
| ! | CTTTAAACAGTACAAATTGT+TGG | + | chr7_3:29797113-29797132 | Msa1100270:intron | 25.0% |
| ! | ATATAAACTTAAGTCATGGT+AGG | + | chr7_3:29797192-29797211 | Msa1100270:intron | 25.0% |
| ! | TATAAACTTAAGTCATGGTA+GGG | + | chr7_3:29797193-29797212 | Msa1100270:intron | 25.0% |
| ! | ATAAATACAACCAAATCAAG+CGG | - | chr7_3:29797288-29797307 | None:intergenic | 25.0% |
| !!! | AGTGTTGTTTAACTATGAAA+TGG | + | chr7_3:29797378-29797397 | Msa1100270:intron | 25.0% |
| !! | AAGATAAATTTGATGGTTGT+AGG | + | chr7_3:29797442-29797461 | Msa1100270:intron | 25.0% |
| ! | GTAGGAAGAAATCAATTAAT+TGG | + | chr7_3:29797460-29797479 | Msa1100270:intron | 25.0% |
| ! | TACAAAAGAATGCGAAATAA+AGG | - | chr7_3:29798103-29798122 | None:intergenic | 25.0% |
| !! | ATGTGAAGGTAAGTAATTTT+TGG | - | chr7_3:29798376-29798395 | None:intergenic | 25.0% |
| !! | TTATGAGTGCGAAAAATTTT+CGG | + | chr7_3:29798396-29798415 | Msa1100270:CDS | 25.0% |
| !!! | AAGACTTTGTGATAGTTTTT+TGG | + | chr7_3:29798493-29798512 | Msa1100270:intron | 25.0% |
| !! | TATTTTATTCTGTTTCGTGT+CGG | + | chr7_3:29799010-29799029 | Msa1100270:intron | 25.0% |
| !! | CATTGATTAATTTGATGACA+TGG | - | chr7_3:29799143-29799162 | None:intergenic | 25.0% |
| ! | CATGTCATCAAATTAATCAA+TGG | + | chr7_3:29799141-29799160 | Msa1100270:intron | 25.0% |
| ! | ATCTTCTCCACATATAAATT+TGG | - | chr7_3:29799307-29799326 | None:intergenic | 25.0% |
| ! | TTAACAATGTTACAATGCAT+AGG | - | chr7_3:29799421-29799440 | None:intergenic | 25.0% |
| ! | TATGCATTGTAACATTGTTA+AGG | + | chr7_3:29799420-29799439 | Msa1100270:intron | 25.0% |
| !! | TTTCATTTTGTGAAGATTTG+TGG | + | chr7_3:29799447-29799466 | Msa1100270:intron | 25.0% |
| ! | CTTATCCATTCATTAAAACT+AGG | - | chr7_3:29799749-29799768 | None:intergenic | 25.0% |
| !!! | CTAGTTTTAATGAATGGATA+AGG | + | chr7_3:29799747-29799766 | Msa1100270:intron | 25.0% |
| !!! | AAATTATTATTGGTGTCAAC+GGG | - | chr7_3:29800010-29800029 | None:intergenic | 25.0% |
| !!! | CAAATTATTATTGGTGTCAA+CGG | - | chr7_3:29800011-29800030 | None:intergenic | 25.0% |
| ! | TGAAAAGTTGAATAATGCAA+AGG | - | chr7_3:29800184-29800203 | None:intergenic | 25.0% |
| !!! | TTTTTTGAAATTTCAGGTGA+AGG | + | chr7_3:29800258-29800277 | Msa1100270:intron | 25.0% |
| ! | TGTGTTTGTTTAGAGAAATT+TGG | + | chr7_3:29800422-29800441 | Msa1100270:three_prime_UTR | 25.0% |
| !!! | TTTTTGGTTTTTATCTCCTT+TGG | + | chr7_3:29800482-29800501 | Msa1100270:three_prime_UTR | 25.0% |
| ! | ATTATGTACATACCAAAAAC+TGG | + | chr7_3:29800518-29800537 | Msa1100270:three_prime_UTR | 25.0% |
| !! | ATTCAAAGAGGTTTTTGAAG+AGG | - | chr7_3:29795660-29795679 | None:intergenic | 30.0% |
| GATAAGAAAGAGATTCAAAG+AGG | - | chr7_3:29795672-29795691 | None:intergenic | 30.0% | |
| AAGAAAAACGAATCAAAGAG+AGG | - | chr7_3:29795843-29795862 | None:intergenic | 30.0% | |
| !!! | TGTTTTTTGCTCTGTTTCAA+TGG | + | chr7_3:29795908-29795927 | Msa1100270:exon | 30.0% |
| !!! | GTTTTTTGCTCTGTTTCAAT+GGG | + | chr7_3:29795909-29795928 | Msa1100270:exon | 30.0% |
| AGAAACATGGTTGAAAGAAA+AGG | + | chr7_3:29795939-29795958 | Msa1100270:CDS | 30.0% | |
| GAAACATGGTTGAAAGAAAA+GGG | + | chr7_3:29795940-29795959 | Msa1100270:CDS | 30.0% | |
| ATTTCAATGTGTTGAGAAGA+AGG | - | chr7_3:29796122-29796141 | None:intergenic | 30.0% | |
| ATAGGGACTAAAAATGCTAA+CGG | + | chr7_3:29796487-29796506 | Msa1100270:intron | 30.0% | |
| AATAAGAAACGACACAAATC+AGG | - | chr7_3:29796682-29796701 | None:intergenic | 30.0% | |
| ! | AATTATGTGTACTTTTCCCA+TGG | - | chr7_3:29796944-29796963 | None:intergenic | 30.0% |
| !! | ATAGTGTTGACATCATGTAA+TGG | - | chr7_3:29796981-29797000 | None:intergenic | 30.0% |
| TCTTCAAAAGACATCTAGTT+AGG | - | chr7_3:29797318-29797337 | None:intergenic | 30.0% | |
| ATTTATGAACCAACTACATG+TGG | - | chr7_3:29797348-29797367 | None:intergenic | 30.0% | |
| GCTTGATATTAGCAAGTTAT+AGG | + | chr7_3:29797412-29797431 | Msa1100270:intron | 30.0% | |
| !! | TGTGATGGATGTAAAAAATG+AGG | + | chr7_3:29797511-29797530 | Msa1100270:intron | 30.0% |
| !!! | TGTTACTTTTTGAGAGTGAA+TGG | + | chr7_3:29797541-29797560 | Msa1100270:intron | 30.0% |
| TGGATGAGATTTATAAGTGA+AGG | + | chr7_3:29797580-29797599 | Msa1100270:intron | 30.0% | |
| ! | TATAAGATAAGAGTGTGTCT+AGG | + | chr7_3:29797655-29797674 | Msa1100270:intron | 30.0% |
| AAAATCAGACAATTTGAGTG+TGG | - | chr7_3:29797747-29797766 | None:intergenic | 30.0% | |
| ! | ACACTCAAATTGTCTGATTT+TGG | + | chr7_3:29797746-29797765 | Msa1100270:intron | 30.0% |
| ACTTGACATTGTGTTTATCA+TGG | + | chr7_3:29797862-29797881 | Msa1100270:intron | 30.0% | |
| ! | TACAAAACTAGCTTGTAACA+CGG | - | chr7_3:29797898-29797917 | None:intergenic | 30.0% |
| AAAAATCGAGAGAAAAGAAC+GGG | - | chr7_3:29797971-29797990 | None:intergenic | 30.0% | |
| CAAAAATCGAGAGAAAAGAA+CGG | - | chr7_3:29797972-29797991 | None:intergenic | 30.0% | |
| !! | TTTTCTTTTGAGAAATGGAG+AGG | + | chr7_3:29798153-29798172 | Msa1100270:intron | 30.0% |
| CCATATTTCAGCAATATCAA+CGG | + | chr7_3:29798343-29798362 | Msa1100270:CDS | 30.0% | |
| ACATAACTTGAAAGCAGTTT+AGG | - | chr7_3:29798655-29798674 | None:intergenic | 30.0% | |
| !!! | ATATTTTGATGTGTTGCAGA+TGG | + | chr7_3:29798789-29798808 | Msa1100270:intron | 30.0% |
| !!! | TATTTTGATGTGTTGCAGAT+GGG | + | chr7_3:29798790-29798809 | Msa1100270:intron | 30.0% |
| ATCATAAGATTTGATGTGCA+TGG | - | chr7_3:29798899-29798918 | None:intergenic | 30.0% | |
| TGCACATCAAATCTTATGAT+TGG | + | chr7_3:29798899-29798918 | Msa1100270:CDS | 30.0% | |
| GCACATCAAATCTTATGATT+GGG | + | chr7_3:29798900-29798919 | Msa1100270:CDS | 30.0% | |
| ! | GGATTTAAAATTGGGTGATA+TGG | - | chr7_3:29799286-29799305 | None:intergenic | 30.0% |
| ! | GTATATCACGTGCTTTTATT+TGG | + | chr7_3:29799373-29799392 | Msa1100270:intron | 30.0% |
| TAAATATGTACCTGGAAAGT+TGG | - | chr7_3:29799726-29799745 | None:intergenic | 30.0% | |
| AAACTAGGTAAATATGTACC+TGG | - | chr7_3:29799734-29799753 | None:intergenic | 30.0% | |
| !! | AGGTTTTATATATCGTTCGA+TGG | + | chr7_3:29799767-29799786 | Msa1100270:intron | 30.0% |
| TGGTTAAAACCATATGTGTA+CGG | + | chr7_3:29799787-29799806 | Msa1100270:intron | 30.0% | |
| AAACTATGACATCGTGTAAA+AGG | - | chr7_3:29799834-29799853 | None:intergenic | 30.0% | |
| TACAGTGAAATGAATCGAAT+TGG | + | chr7_3:29799859-29799878 | Msa1100270:intron | 30.0% | |
| AATAGTTGAAGTTTGGTTAG+AGG | + | chr7_3:29799923-29799942 | Msa1100270:intron | 30.0% | |
| ! | ATATACTGACACGTTTTCAA+TGG | - | chr7_3:29799965-29799984 | None:intergenic | 30.0% |
| ! | AATGCAAAGGTATAGCATTT+AGG | - | chr7_3:29800171-29800190 | None:intergenic | 30.0% |
| AGGAAAAGAAAGACTATGAA+TGG | + | chr7_3:29800298-29800317 | Msa1100270:CDS | 30.0% | |
| ACTATTACTTGTAAACTCTC+AGG | - | chr7_3:29800342-29800361 | None:intergenic | 30.0% | |
| ! | TGCTTCTTAGATAGTGTTTT+TGG | + | chr7_3:29800466-29800485 | Msa1100270:three_prime_UTR | 30.0% |
| TACATACCAAAAACTGGAAA+GGG | + | chr7_3:29800524-29800543 | Msa1100270:three_prime_UTR | 30.0% | |
| !! | GAGGTTTTTGAAGAGGTAAA+TGG | - | chr7_3:29795653-29795672 | None:intergenic | 35.0% |
| AGTAAAACAGAGGAAAACAG+GGG | - | chr7_3:29795710-29795729 | None:intergenic | 35.0% | |
| GAGTAAAACAGAGGAAAACA+GGG | - | chr7_3:29795711-29795730 | None:intergenic | 35.0% | |
| AGAGTAAAACAGAGGAAAAC+AGG | - | chr7_3:29795712-29795731 | None:intergenic | 35.0% | |
| CAGAAAACAGAGTAAAACAG+AGG | - | chr7_3:29795720-29795739 | None:intergenic | 35.0% | |
| ! | GAAAAGGGTGTGTAAGAAAA+CGG | - | chr7_3:29795762-29795781 | None:intergenic | 35.0% |
| ! | AGAGGATTTTTGTAGAGGAA+TGG | - | chr7_3:29795825-29795844 | None:intergenic | 35.0% |
| ! | CAAAGAGAGGATTTTTGTAG+AGG | - | chr7_3:29795830-29795849 | None:intergenic | 35.0% |
| AATGGGAATTGAGAGAAACA+TGG | + | chr7_3:29795926-29795945 | Msa1100270:exon | 35.0% | |
| TGAGACTTTGTATTCTCAGA+AGG | + | chr7_3:29796638-29796657 | Msa1100270:intron | 35.0% | |
| !!! | ACCATGTTCTTGTTTTTCCA+TGG | + | chr7_3:29796924-29796943 | Msa1100270:intron | 35.0% |
| !!! | CCATGTTCTTGTTTTTCCAT+GGG | + | chr7_3:29796925-29796944 | Msa1100270:intron | 35.0% |
| ! | TTTTTATAGTAGTGGTGGCA+TGG | - | chr7_3:29797075-29797094 | None:intergenic | 35.0% |
| ! | TAGGGTTTTTATAGTAGTGG+TGG | - | chr7_3:29797080-29797099 | None:intergenic | 35.0% |
| GATGGATGTAAAAAATGAGG+TGG | + | chr7_3:29797514-29797533 | Msa1100270:intron | 35.0% | |
| !! | TATAGCAGTGAGTTGATAGT+TGG | - | chr7_3:29797694-29797713 | None:intergenic | 35.0% |
| ACTATCAACTCACTGCTATA+AGG | + | chr7_3:29797694-29797713 | Msa1100270:intron | 35.0% | |
| AAAATCGGACAATTTGAGTG+TGG | - | chr7_3:29797796-29797815 | None:intergenic | 35.0% | |
| ! | ACACTCAAATTGTCCGATTT+TGG | + | chr7_3:29797795-29797814 | Msa1100270:intron | 35.0% |
| TGACATTGTGTTTATCATGG+TGG | + | chr7_3:29797865-29797884 | Msa1100270:intron | 35.0% | |
| !!! | CAAGCTAGTTTTGTAAGAGT+TGG | + | chr7_3:29797903-29797922 | Msa1100270:intron | 35.0% |
| TCATTCTTGGAATCGTAAAG+AGG | - | chr7_3:29798188-29798207 | None:intergenic | 35.0% | |
| CCGTTGATATTGCTGAAATA+TGG | - | chr7_3:29798346-29798365 | None:intergenic | 35.0% | |
| TATTTCAGCAATATCAACGG+TGG | + | chr7_3:29798346-29798365 | Msa1100270:CDS | 35.0% | |
| TTTCGCACTCATAAATGTGA+AGG | - | chr7_3:29798390-29798409 | None:intergenic | 35.0% | |
| !!! | GTTTTTAGCAAGCTTCTCTT+TGG | + | chr7_3:29798871-29798890 | Msa1100270:CDS | 35.0% |
| ATCAAATCTTATGATTGGGC+CGG | + | chr7_3:29798904-29798923 | Msa1100270:CDS | 35.0% | |
| GGATGAGTATTCTTCGAATT+GGG | - | chr7_3:29799122-29799141 | None:intergenic | 35.0% | |
| TGGATGAGTATTCTTCGAAT+TGG | - | chr7_3:29799123-29799142 | None:intergenic | 35.0% | |
| ! | ATTTTCGCCAATCTTTTCTC+CGG | - | chr7_3:29799527-29799546 | None:intergenic | 35.0% |
| GAAAAGATTGGCGAAAATCA+AGG | + | chr7_3:29799529-29799548 | Msa1100270:CDS | 35.0% | |
| ! | AAGAACATCTAAAACAGCAC+AGG | - | chr7_3:29799642-29799661 | None:intergenic | 35.0% |
| !!! | TGTGCTGTTTTAGATGTTCT+TGG | + | chr7_3:29799641-29799660 | Msa1100270:CDS | 35.0% |
| AAGTTTGGTTAGAGGATTCA+GGG | + | chr7_3:29799931-29799950 | Msa1100270:intron | 35.0% | |
| TCTCGAACACTTCATATTGA+AGG | - | chr7_3:29800111-29800130 | None:intergenic | 35.0% | |
| ! | TTCAATATGAAGTGTTCGAG+AGG | + | chr7_3:29800110-29800129 | Msa1100270:intron | 35.0% |
| !! | GTTCGAGAGGTATCAATATT+TGG | + | chr7_3:29800123-29800142 | Msa1100270:intron | 35.0% |
| ! | TTTCTTTTCCTCTTCTGGTA+TGG | - | chr7_3:29800289-29800308 | None:intergenic | 35.0% |
| ! | TAGTCTTTCTTTTCCTCTTC+TGG | - | chr7_3:29800294-29800313 | None:intergenic | 35.0% |
| AATAACTGAAACAGCACCAA+AGG | - | chr7_3:29800501-29800520 | None:intergenic | 35.0% | |
| GTACATACCAAAAACTGGAA+AGG | + | chr7_3:29800523-29800542 | Msa1100270:three_prime_UTR | 35.0% | |
| ! | AATTTGCCCTTTCCAGTTTT+TGG | - | chr7_3:29800533-29800552 | None:intergenic | 35.0% |
| ACATGAAACCAAGGAAGAAC+CGG | + | chr7_3:29796003-29796022 | Msa1100270:CDS | 40.0% | |
| GCAAGAAACAGTTTCTGAAC+CGG | - | chr7_3:29796059-29796078 | None:intergenic | 40.0% | |
| ! | GTTTTTGCTAATGCTGCTCA+TGG | + | chr7_3:29796089-29796108 | Msa1100270:CDS | 40.0% |
| GAAATGCTTCGTTCTGTCTT+AGG | + | chr7_3:29796137-29796156 | Msa1100270:CDS | 40.0% | |
| ATAGGGACTACAAATGCTGA+TGG | + | chr7_3:29796519-29796538 | Msa1100270:intron | 40.0% | |
| CCCATGGAAAAACAAGAACA+TGG | - | chr7_3:29796928-29796947 | None:intergenic | 40.0% | |
| CAGTACAAATTGTTGGGAGT+TGG | + | chr7_3:29797120-29797139 | Msa1100270:intron | 40.0% | |
| TCCTTGTGTCACATTGTCAT+TGG | + | chr7_3:29797261-29797280 | Msa1100270:intron | 40.0% | |
| TCCAATGACAATGTGACACA+AGG | - | chr7_3:29797265-29797284 | None:intergenic | 40.0% | |
| GATAATGTGCCACATGTAGT+TGG | + | chr7_3:29797336-29797355 | Msa1100270:intron | 40.0% | |
| CTATGAAATGGTCAACCACT+AGG | + | chr7_3:29797390-29797409 | Msa1100270:intron | 40.0% | |
| CTTGCTAATATCAAGCCTAG+TGG | - | chr7_3:29797408-29797427 | None:intergenic | 40.0% | |
| ! | ATGGTGTTAAGAGTCTCGTA+TGG | + | chr7_3:29797560-29797579 | Msa1100270:intron | 40.0% |
| ! | AGAGTGTGTCTAGGATCTAT+TGG | + | chr7_3:29797664-29797683 | Msa1100270:intron | 40.0% |
| ! | GAGTGTGTCTAGGATCTATT+GGG | + | chr7_3:29797665-29797684 | Msa1100270:intron | 40.0% |
| ACTCTTCTCACGACCAAAAT+CGG | - | chr7_3:29797811-29797830 | None:intergenic | 40.0% | |
| TTGCTGAAATATGGCATGTC+CGG | - | chr7_3:29798337-29798356 | None:intergenic | 40.0% | |
| ! | ATATTTTGCTTGCCACCTTC+TGG | + | chr7_3:29798814-29798833 | Msa1100270:CDS | 40.0% |
| TGAAGAGGAATTACTCCAGA+AGG | - | chr7_3:29798832-29798851 | None:intergenic | 40.0% | |
| AATTCCTCTTCACAATCACC+CGG | + | chr7_3:29798840-29798859 | Msa1100270:CDS | 40.0% | |
| TTGCTAAAAACCGTCATTCC+CGG | - | chr7_3:29798862-29798881 | None:intergenic | 40.0% | |
| ! | CAATCTTTTCTCCGGAATCT+GGG | - | chr7_3:29799519-29799538 | None:intergenic | 40.0% |
| TAAAGGATCGAAGGATTGCA+TGG | - | chr7_3:29799575-29799594 | None:intergenic | 40.0% | |
| TCATCAGGATAAAGGATCGA+AGG | - | chr7_3:29799584-29799603 | None:intergenic | 40.0% | |
| TCGATCCTTTATCCTGATGA+TGG | + | chr7_3:29799584-29799603 | Msa1100270:CDS | 40.0% | |
| !! | ATCCTTTATCCTGATGATGG+TGG | + | chr7_3:29799587-29799606 | Msa1100270:CDS | 40.0% |
| AGTTGGAAAACGGGAAACTT+CGG | - | chr7_3:29799709-29799728 | None:intergenic | 40.0% | |
| TACCTGGAAAGTTGGAAAAC+GGG | - | chr7_3:29799718-29799737 | None:intergenic | 40.0% | |
| GTACCTGGAAAGTTGGAAAA+CGG | - | chr7_3:29799719-29799738 | None:intergenic | 40.0% | |
| TCAAAGAGTCGAAGTTTAGC+TGG | - | chr7_3:29799896-29799915 | None:intergenic | 40.0% | |
| GAAGTTTGGTTAGAGGATTC+AGG | + | chr7_3:29799930-29799949 | Msa1100270:intron | 40.0% | |
| CACATCTATGCGTGTTATGT+TGG | + | chr7_3:29800056-29800075 | Msa1100270:intron | 40.0% | |
| AGGAATAACCATACCAGAAG+AGG | + | chr7_3:29800278-29800297 | Msa1100270:CDS | 40.0% | |
| AGGAAAACAGGGGAAAACAG+GGG | - | chr7_3:29795700-29795719 | None:intergenic | 45.0% | |
| GAGGAAAACAGGGGAAAACA+GGG | - | chr7_3:29795701-29795720 | None:intergenic | 45.0% | |
| AGAGGAAAACAGGGGAAAAC+AGG | - | chr7_3:29795702-29795721 | None:intergenic | 45.0% | |
| TGTCATTGGACCGCTTGATT+TGG | + | chr7_3:29797275-29797294 | Msa1100270:intron | 45.0% | |
| GAAGGTCTCACTTTACGAGT+TGG | + | chr7_3:29797598-29797617 | Msa1100270:intron | 45.0% | |
| ACTGCTATAAGGCCGCTATA+AGG | + | chr7_3:29797705-29797724 | Msa1100270:intron | 45.0% | |
| TGGAATCGTAAAGAGGAGCA+AGG | - | chr7_3:29798181-29798200 | None:intergenic | 45.0% | |
| ! | AGAAGACCTTGGCTTGAAAC+CGG | + | chr7_3:29798315-29798334 | Msa1100270:CDS | 45.0% |
| AGAGGAATTACTCCAGAAGG+TGG | - | chr7_3:29798829-29798848 | None:intergenic | 45.0% | |
| ATTCCTCTTCACAATCACCC+GGG | + | chr7_3:29798841-29798860 | Msa1100270:CDS | 45.0% | |
| TGCTAAAAACCGTCATTCCC+GGG | - | chr7_3:29798861-29798880 | None:intergenic | 45.0% | |
| TCACTTTGTGAGACATCAGC+AGG | - | chr7_3:29798937-29798956 | None:intergenic | 45.0% | |
| CGAATTGGGAAATGCCACAT+CGG | - | chr7_3:29799108-29799127 | None:intergenic | 45.0% | |
| ! | CCAATCTTTTCTCCGGAATC+TGG | - | chr7_3:29799520-29799539 | None:intergenic | 45.0% |
| CCAGATTCCGGAGAAAAGAT+TGG | + | chr7_3:29799517-29799536 | Msa1100270:CDS | 45.0% | |
| TGCCACCATCATCAGGATAA+AGG | - | chr7_3:29799592-29799611 | None:intergenic | 45.0% | |
| CTTCCATCAGGATCAGAGTA+TGG | - | chr7_3:29799671-29799690 | None:intergenic | 45.0% | |
| CATACTCTGATCCTGATGGA+AGG | + | chr7_3:29799669-29799688 | Msa1100270:CDS | 45.0% | |
| TATGCACAATGCCTTCCATC+AGG | - | chr7_3:29799683-29799702 | None:intergenic | 45.0% | |
| ! | TTCCCGTTTTCCAACTTTCC+AGG | + | chr7_3:29799713-29799732 | Msa1100270:CDS | 45.0% |
| TTTGGTTAGAGGATTCAGGG+TGG | + | chr7_3:29799934-29799953 | Msa1100270:intron | 45.0% | |
| !! | TGTTGGTGTCATACACGTGT+TGG | + | chr7_3:29800073-29800092 | Msa1100270:intron | 45.0% |
| GTACAGCAGCTCAAAGACTA+TGG | + | chr7_3:29800368-29800387 | Msa1100270:CDS | 45.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr7_3:29795561-29795580 | None:intergenic | 50.0% | |
| ACAGGGGAAAACAGGGGAAA+TGG | - | chr7_3:29795694-29795713 | None:intergenic | 50.0% | |
| !! | ACGCTTGAGTGGCCTTATAG+CGG | - | chr7_3:29797720-29797739 | None:intergenic | 50.0% |
| GTTGCTTCTGTTTGTGCAGC+TGG | + | chr7_3:29798283-29798302 | Msa1100270:intron | 50.0% | |
| GGAATCAAGCCAGAAGACCT+TGG | + | chr7_3:29798304-29798323 | Msa1100270:CDS | 50.0% | |
| GGTTTCAAGCCAAGGTCTTC+TGG | - | chr7_3:29798316-29798335 | None:intergenic | 50.0% | |
| ATTCCCGGGTGATTGTGAAG+AGG | - | chr7_3:29798847-29798866 | None:intergenic | 50.0% | |
| TCACAATCACCCGGGAATGA+CGG | + | chr7_3:29798849-29798868 | Msa1100270:CDS | 50.0% | |
| TGACAAGTGAGTTGCCGATG+TGG | + | chr7_3:29799091-29799110 | Msa1100270:intron | 50.0% | |
| ATTTGTGCCAGCCCAGATTC+CGG | + | chr7_3:29799505-29799524 | Msa1100270:intron | 50.0% | |
| TGCATGTTGCCACCATCATC+AGG | - | chr7_3:29799599-29799618 | None:intergenic | 50.0% | |
| CCATCAGGATCAGAGTATGG+AGG | - | chr7_3:29799668-29799687 | None:intergenic | 50.0% | |
| CCTCCATACTCTGATCCTGA+TGG | + | chr7_3:29799665-29799684 | Msa1100270:CDS | 50.0% | |
| TGACGTGCACCGTACACATA+TGG | - | chr7_3:29799799-29799818 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGG+TGG | - | chr7_3:29795560-29795579 | None:intergenic | 55.0% | |
| !! | AGATGTCGCCGGTTCTTCCT+TGG | - | chr7_3:29796014-29796033 | None:intergenic | 55.0% |
| AGTGTGGCTTGACGCTTGAG+TGG | - | chr7_3:29797731-29797750 | None:intergenic | 55.0% | |
| AGTGTGGCTTGACGCTTGAG+TGG | - | chr7_3:29797731-29797750 | None:intergenic | 55.0% | |
| GCATGTCCGGTTTCAAGCCA+AGG | - | chr7_3:29798324-29798343 | None:intergenic | 55.0% | |
| GACATCAGCAGGCAAGTCAC+CGG | - | chr7_3:29798926-29798945 | None:intergenic | 55.0% | |
| ! | CTTTTCTCCGGAATCTGGGC+TGG | - | chr7_3:29799515-29799534 | None:intergenic | 55.0% |
| TCCTGCGACGAAGATGTCGC+CGG | - | chr7_3:29796025-29796044 | None:intergenic | 60.0% | |
| GCGACATCTTCGTCGCAGGA+CGG | + | chr7_3:29796025-29796044 | Msa1100270:CDS | 60.0% | |
| ACCGGCGACATCTTCGTCGC+AGG | + | chr7_3:29796021-29796040 | Msa1100270:CDS | 65.0% | |
| TCGCAGGACGGAGATGACGC+CGG | + | chr7_3:29796037-29796056 | Msa1100270:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 29795556 | 29800623 | 29795556 | ID=Msa1100270;Name=Msa1100270 |
| chr7_3 | mRNA | 29795556 | 29800623 | 29795556 | ID=Msa1100270-mRNA-1;Parent=Msa1100270;Name=Msa1100270-mRNA-1;_AED=0.14;_eAED=0.14;_QI=344|1|1|1|0.8|0.66|6|225|278 |
| chr7_3 | exon | 29795556 | 29795600 | 29795556 | ID=Msa1100270-mRNA-1:exon:6368;Parent=Msa1100270-mRNA-1 |
| chr7_3 | exon | 29795628 | 29796158 | 29795628 | ID=Msa1100270-mRNA-1:exon:6369;Parent=Msa1100270-mRNA-1 |
| chr7_3 | exon | 29798302 | 29798417 | 29798302 | ID=Msa1100270-mRNA-1:exon:6370;Parent=Msa1100270-mRNA-1 |
| chr7_3 | exon | 29798808 | 29798952 | 29798808 | ID=Msa1100270-mRNA-1:exon:6371;Parent=Msa1100270-mRNA-1 |
| chr7_3 | exon | 29799516 | 29799734 | 29799516 | ID=Msa1100270-mRNA-1:exon:6372;Parent=Msa1100270-mRNA-1 |
| chr7_3 | exon | 29800274 | 29800623 | 29800274 | ID=Msa1100270-mRNA-1:exon:6373;Parent=Msa1100270-mRNA-1 |
| chr7_3 | five_prime_UTR | 29795556 | 29795600 | 29795556 | ID=Msa1100270-mRNA-1:five_prime_utr;Parent=Msa1100270-mRNA-1 |
| chr7_3 | five_prime_UTR | 29795628 | 29795926 | 29795628 | ID=Msa1100270-mRNA-1:five_prime_utr;Parent=Msa1100270-mRNA-1 |
| chr7_3 | CDS | 29795927 | 29796158 | 29795927 | ID=Msa1100270-mRNA-1:cds;Parent=Msa1100270-mRNA-1 |
| chr7_3 | CDS | 29798302 | 29798417 | 29798302 | ID=Msa1100270-mRNA-1:cds;Parent=Msa1100270-mRNA-1 |
| chr7_3 | CDS | 29798808 | 29798952 | 29798808 | ID=Msa1100270-mRNA-1:cds;Parent=Msa1100270-mRNA-1 |
| chr7_3 | CDS | 29799516 | 29799734 | 29799516 | ID=Msa1100270-mRNA-1:cds;Parent=Msa1100270-mRNA-1 |
| chr7_3 | CDS | 29800274 | 29800398 | 29800274 | ID=Msa1100270-mRNA-1:cds;Parent=Msa1100270-mRNA-1 |
| chr7_3 | three_prime_UTR | 29800399 | 29800623 | 29800399 | ID=Msa1100270-mRNA-1:three_prime_utr;Parent=Msa1100270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
