Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101490 | XP_039687727.1 | 65.693 | 137 | 10 | 1 | 1 | 100 | 211 | 347 | 1.50e-44 | 169 |
| Msa1101490 | XP_039687727.1 | 89.623 | 106 | 11 | 0 | 91 | 196 | 417 | 522 | 1.13e-53 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101490 | A0A396IXC6 | 65.693 | 137 | 10 | 1 | 1 | 100 | 241 | 377 | 8.44e-45 | 169 |
| Msa1101490 | A0A396IXC6 | 89.623 | 106 | 11 | 0 | 91 | 196 | 447 | 552 | 7.04e-54 | 194 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa1101490 | 0.800045 | 1.732955e-48 | -8.615850e-47 |
| Msa0036920 | Msa1101490 | 0.803847 | 2.867452e-49 | -8.615850e-47 |
| Msa0753720 | Msa1101490 | 0.817486 | 3.216205e-52 | -8.615850e-47 |
| Msa1082500 | Msa1101490 | 0.810964 | 8.869700e-51 | -8.615850e-47 |
| Msa1101490 | Msa1353470 | 0.801742 | 7.799314e-49 | -8.615850e-47 |
| Msa1101490 | Msa1466540 | 0.816977 | 4.186363e-52 | -8.615850e-47 |
| Msa0245940 | Msa1101490 | 0.804553 | 2.044315e-49 | -8.615850e-47 |
| Msa0484780 | Msa1101490 | 0.812284 | 4.581877e-51 | -8.615850e-47 |
| Msa0513490 | Msa1101490 | 0.895947 | 5.899695e-76 | -8.615850e-47 |
| Msa0545210 | Msa1101490 | 0.813343 | 2.685432e-51 | -8.615850e-47 |
| Msa0926890 | Msa1101490 | 0.807016 | 6.208630e-50 | -8.615850e-47 |
| Msa0969450 | Msa1101490 | 0.813377 | 2.639930e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101490 | MtrunA17_Chr3g0134641 | 89.623 | 106 | 11 | 0 | 91 | 196 | 447 | 552 | 1.36e-57 | 194 |
| Msa1101490 | MtrunA17_Chr3g0134641 | 65.693 | 137 | 10 | 1 | 1 | 100 | 241 | 377 | 1.63e-48 | 169 |
| Msa1101490 | MtrunA17_Chr3g0134671 | 38.224 | 259 | 59 | 4 | 1 | 158 | 79 | 337 | 1.61e-39 | 139 |
| Msa1101490 | MtrunA17_Chr3g0134691 | 55.263 | 114 | 38 | 4 | 48 | 158 | 9 | 112 | 5.25e-27 | 99.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 47 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTTGCCTTCTGTTAATTC+TGG | 0.221734 | 7_3:-32299627 | Msa1101490:CDS |
| AACATCAGCCGAACAAAATT+CGG | 0.264339 | 7_3:-32299739 | Msa1101490:intron |
| GCAAAATGGGAAGCAGAATT+TGG | 0.288152 | 7_3:+32299492 | None:intergenic |
| GTAACAGTTGGCATCCTTAC+AGG | 0.316826 | 7_3:+32301695 | None:intergenic |
| AAAACCAATACAGGTTCTTC+TGG | 0.332997 | 7_3:-32301728 | Msa1101490:CDS |
| GCTGTTGTTGCTGCCTATTA+AGG | 0.376322 | 7_3:+32301413 | None:intergenic |
| ACCGGATGATGGTAATTGAT+TGG | 0.388595 | 7_3:+32301486 | None:intergenic |
| TTCACATGCAAGGCCTTAAT+AGG | 0.388874 | 7_3:-32301426 | Msa1101490:CDS |
| TAATTCTGGTCAAAATGAAC+AGG | 0.399230 | 7_3:-32299613 | Msa1101490:CDS |
| GATCTGGTTGAGATGCAAAA+TGG | 0.404769 | 7_3:+32299478 | None:intergenic |
| TGCTCAATACAAAGGTCATT+AGG | 0.422171 | 7_3:+32299681 | None:intergenic |
| CATCATTTATCTAAGTTGCA+TGG | 0.441846 | 7_3:-32299648 | Msa1101490:CDS |
| ATCGTTAAACTTTGTTCCAC+TGG | 0.442212 | 7_3:+32301670 | None:intergenic |
| ACATCAGCCGAACAAAATTC+GGG | 0.450556 | 7_3:-32299738 | Msa1101490:intron |
| CTGTCCAGAAGAACCTGTAT+TGG | 0.469730 | 7_3:+32301724 | None:intergenic |
| ATTAGCAAAAGTGCAACAAC+AGG | 0.474794 | 7_3:-32301834 | Msa1101490:intron |
| CACTGCCTCCATACGTCGAT+GGG | 0.476589 | 7_3:+32301380 | None:intergenic |
| ATCATTTATCTAAGTTGCAT+GGG | 0.478726 | 7_3:-32299647 | Msa1101490:CDS |
| TTGACTAATAGCAATAGAAC+CGG | 0.480148 | 7_3:+32301468 | None:intergenic |
| TCCAATCAATTACCATCATC+CGG | 0.489393 | 7_3:-32301487 | Msa1101490:CDS |
| CTTACAGAAACAGTTGGATC+TGG | 0.495792 | 7_3:+32299462 | None:intergenic |
| ATCTGGTTGAGATGCAAAAT+GGG | 0.513802 | 7_3:+32299479 | None:intergenic |
| CTGGACAGCAGTCCCCTGTA+AGG | 0.516056 | 7_3:-32301709 | Msa1101490:CDS |
| TTTGTATTGAGCAGCAACAT+AGG | 0.519492 | 7_3:-32299671 | Msa1101490:CDS |
| GGTCAAAATGAACAGGGTAG+TGG | 0.525672 | 7_3:-32299606 | Msa1101490:CDS |
| ATTCATTTCCCATCGACGTA+TGG | 0.530807 | 7_3:-32301388 | Msa1101490:CDS |
| CTGTAGTTGTGCTAATGCAT+GGG | 0.531365 | 7_3:+32301646 | None:intergenic |
| TAACAGTTGGCATCCTTACA+GGG | 0.536294 | 7_3:+32301696 | None:intergenic |
| CCATCGACGTATGGAGGCAG+TGG | 0.544986 | 7_3:-32301379 | Msa1101490:CDS |
| CCACTGCCTCCATACGTCGA+TGG | 0.546388 | 7_3:+32301379 | None:intergenic |
| CAGGGTAGTGGTATCAATCA+AGG | 0.555328 | 7_3:-32299594 | Msa1101490:CDS |
| ACTGTAGTTGTGCTAATGCA+TGG | 0.557501 | 7_3:+32301645 | None:intergenic |
| AGATCCTCTGTTCACATGCA+AGG | 0.558115 | 7_3:-32301436 | Msa1101490:CDS |
| GTTCCACTGGAAGTAACAGT+TGG | 0.574046 | 7_3:+32301683 | None:intergenic |
| TTCTTTAGCAGCCACTAGCA+TGG | 0.575855 | 7_3:-32299544 | Msa1101490:CDS |
| TTGTAACTTACAGAAACAGT+TGG | 0.577638 | 7_3:+32299456 | None:intergenic |
| CATTTCCCATCGACGTATGG+AGG | 0.584037 | 7_3:-32301385 | Msa1101490:CDS |
| TATCAATCAAGGCACTGTAA+AGG | 0.585256 | 7_3:-32299583 | Msa1101490:CDS |
| ATGCCAACTGTTACTTCCAG+TGG | 0.588289 | 7_3:-32301686 | Msa1101490:CDS |
| ATAGCAATAGAACCGGATGA+TGG | 0.594337 | 7_3:+32301475 | None:intergenic |
| TCGACGTATGGAGGCAGTGG+TGG | 0.603622 | 7_3:-32301376 | Msa1101490:intron |
| TGTTGTATGTGCCATGCTAG+TGG | 0.627173 | 7_3:+32299533 | None:intergenic |
| TATGTTGCTGCTCAATACAA+AGG | 0.629152 | 7_3:+32299673 | None:intergenic |
| TGTAGTTGTGCTAATGCATG+GGG | 0.673248 | 7_3:+32301647 | None:intergenic |
| AATTCTGGTCAAAATGAACA+GGG | 0.683557 | 7_3:-32299612 | Msa1101490:CDS |
| AACAGTTGGCATCCTTACAG+GGG | 0.685263 | 7_3:+32301697 | None:intergenic |
| AAGGCCTTGCATGTGAACAG+AGG | 0.688304 | 7_3:+32301432 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATCAATTAAATCAAAGAT+TGG | + | chr7_3:32300924-32300943 | None:intergenic | 15.0% |
| !!! | ATTGATTTCATAAGATTATT+TGG | - | chr7_3:32301149-32301168 | Msa1101490:intron | 15.0% |
| !! | ATATCAATTAAATCAAAGAT+TGG | + | chr7_3:32300924-32300943 | None:intergenic | 15.0% |
| !!! | ATTGATTTCATAAGATTATT+TGG | - | chr7_3:32301149-32301168 | Msa1101490:intron | 15.0% |
| !!! | AGAATAGATGTTTTTTCTTA+AGG | - | chr7_3:32299509-32299528 | Msa1101490:CDS | 20.0% |
| !!! | GTATTTTAAGCATTCATTTA+TGG | - | chr7_3:32300114-32300133 | Msa1101490:intron | 20.0% |
| !! | AGAATCAAAAACAACAAATT+TGG | - | chr7_3:32300264-32300283 | Msa1101490:intron | 20.0% |
| !! | GAATCAAAAACAACAAATTT+GGG | - | chr7_3:32300265-32300284 | Msa1101490:intron | 20.0% |
| !! | AAATCAATTGTATTGTTCAA+TGG | + | chr7_3:32301137-32301156 | None:intergenic | 20.0% |
| !! | TAAAAAGCTAGAATTCATAT+AGG | - | chr7_3:32301211-32301230 | Msa1101490:intron | 20.0% |
| !! | AATTCATATAGGTGATTATT+AGG | - | chr7_3:32301222-32301241 | Msa1101490:intron | 20.0% |
| !! | ATCTACTTCATATGTAAAAA+AGG | - | chr7_3:32301609-32301628 | Msa1101490:intron | 20.0% |
| !!! | AGAATAGATGTTTTTTCTTA+AGG | - | chr7_3:32299509-32299528 | Msa1101490:CDS | 20.0% |
| !!! | GTATTTTAAGCATTCATTTA+TGG | - | chr7_3:32300114-32300133 | Msa1101490:intron | 20.0% |
| !! | AGAATCAAAAACAACAAATT+TGG | - | chr7_3:32300264-32300283 | Msa1101490:intron | 20.0% |
| !! | GAATCAAAAACAACAAATTT+GGG | - | chr7_3:32300265-32300284 | Msa1101490:intron | 20.0% |
| !! | AAATCAATTGTATTGTTCAA+TGG | + | chr7_3:32301137-32301156 | None:intergenic | 20.0% |
| !! | TAAAAAGCTAGAATTCATAT+AGG | - | chr7_3:32301211-32301230 | Msa1101490:intron | 20.0% |
| !! | AATTCATATAGGTGATTATT+AGG | - | chr7_3:32301222-32301241 | Msa1101490:intron | 20.0% |
| !! | ATCTACTTCATATGTAAAAA+AGG | - | chr7_3:32301609-32301628 | Msa1101490:intron | 20.0% |
| !!! | ATAGATGTTTTTTCTTAAGG+TGG | - | chr7_3:32299512-32299531 | Msa1101490:CDS | 25.0% |
| !! | GTCAAAATTCAATTTTCTCT+CGG | + | chr7_3:32300179-32300198 | None:intergenic | 25.0% |
| ! | GAAAATACAGTGTATTCATT+GGG | - | chr7_3:32300672-32300691 | Msa1101490:intron | 25.0% |
| !!! | TGAAAAGTACTTTTGAATCT+AGG | - | chr7_3:32300944-32300963 | Msa1101490:intron | 25.0% |
| ! | AAAACAACAATTCTAGACAT+AGG | - | chr7_3:32300986-32301005 | Msa1101490:intron | 25.0% |
| ! | GTATTGGAACTTAAAACTTT+CGG | - | chr7_3:32301034-32301053 | Msa1101490:intron | 25.0% |
| ! | ATCATTTATCTAAGTTGCAT+GGG | - | chr7_3:32301668-32301687 | Msa1101490:CDS | 25.0% |
| !!! | ATAGATGTTTTTTCTTAAGG+TGG | - | chr7_3:32299512-32299531 | Msa1101490:CDS | 25.0% |
| !! | GTCAAAATTCAATTTTCTCT+CGG | + | chr7_3:32300179-32300198 | None:intergenic | 25.0% |
| ! | GAAAATACAGTGTATTCATT+GGG | - | chr7_3:32300672-32300691 | Msa1101490:intron | 25.0% |
| !!! | TGAAAAGTACTTTTGAATCT+AGG | - | chr7_3:32300944-32300963 | Msa1101490:intron | 25.0% |
| ! | AAAACAACAATTCTAGACAT+AGG | - | chr7_3:32300986-32301005 | Msa1101490:intron | 25.0% |
| ! | GTATTGGAACTTAAAACTTT+CGG | - | chr7_3:32301034-32301053 | Msa1101490:intron | 25.0% |
| ! | ATCATTTATCTAAGTTGCAT+GGG | - | chr7_3:32301668-32301687 | Msa1101490:CDS | 25.0% |
| TTTATCTGCAAGAAAAAGGA+CGG | + | chr7_3:32299569-32299588 | None:intergenic | 30.0% | |
| ! | GGTTTTTATCTGCAAGAAAA+AGG | + | chr7_3:32299573-32299592 | None:intergenic | 30.0% |
| TTGCAGATAAAAACCAATAC+AGG | - | chr7_3:32299578-32299597 | Msa1101490:CDS | 30.0% | |
| TTGACTAATAGCAATAGAAC+CGG | + | chr7_3:32299850-32299869 | None:intergenic | 30.0% | |
| ATGCTTAAAATACTACTTCC+TGG | + | chr7_3:32300107-32300126 | None:intergenic | 30.0% | |
| ACTTGTTTCACAAGTTATCT+AGG | - | chr7_3:32300147-32300166 | Msa1101490:intron | 30.0% | |
| CTTGTTTCACAAGTTATCTA+GGG | - | chr7_3:32300148-32300167 | Msa1101490:intron | 30.0% | |
| AAAACAACAAATTTGGGCAA+AGG | - | chr7_3:32300271-32300290 | Msa1101490:intron | 30.0% | |
| TGAAAAAGTTATATTTCGCC+TGG | + | chr7_3:32300582-32300601 | None:intergenic | 30.0% | |
| TCATATCTTAGAGAGAGAAT+AGG | - | chr7_3:32300647-32300666 | Msa1101490:intron | 30.0% | |
| CATATCTTAGAGAGAGAATA+GGG | - | chr7_3:32300648-32300667 | Msa1101490:intron | 30.0% | |
| CGAAAATACAGTGTATTCAT+TGG | - | chr7_3:32300671-32300690 | Msa1101490:intron | 30.0% | |
| TCATGAGAACTTTACAAAAG+TGG | + | chr7_3:32300773-32300792 | None:intergenic | 30.0% | |
| ATGAACTAAATCTCCTTAGT+TGG | - | chr7_3:32300798-32300817 | Msa1101490:intron | 30.0% | |
| ! | AATTGGGTTGTTTAATGGTT+TGG | - | chr7_3:32301103-32301122 | Msa1101490:intron | 30.0% |
| ! | ATTGGGTTGTTTAATGGTTT+GGG | - | chr7_3:32301104-32301123 | Msa1101490:intron | 30.0% |
| AGTAAAAGTGGAGAGTAATA+AGG | + | chr7_3:32301295-32301314 | None:intergenic | 30.0% | |
| !! | ATTACTCTCCACTTTTACTT+TGG | - | chr7_3:32301296-32301315 | Msa1101490:intron | 30.0% |
| CTAAATTGCCAAAGTAAAAG+TGG | + | chr7_3:32301307-32301326 | None:intergenic | 30.0% | |
| ! | TTTGCCAAGAATTTGAAGTT+TGG | + | chr7_3:32301558-32301577 | None:intergenic | 30.0% |
| CATCATTTATCTAAGTTGCA+TGG | - | chr7_3:32301667-32301686 | Msa1101490:CDS | 30.0% | |
| ! | TTTTGACCAGAATTAACAGA+AGG | + | chr7_3:32301697-32301716 | None:intergenic | 30.0% |
| TAATTCTGGTCAAAATGAAC+AGG | - | chr7_3:32301702-32301721 | Msa1101490:CDS | 30.0% | |
| AATTCTGGTCAAAATGAACA+GGG | - | chr7_3:32301703-32301722 | Msa1101490:CDS | 30.0% | |
| TTTATCTGCAAGAAAAAGGA+CGG | + | chr7_3:32299569-32299588 | None:intergenic | 30.0% | |
| ! | GGTTTTTATCTGCAAGAAAA+AGG | + | chr7_3:32299573-32299592 | None:intergenic | 30.0% |
| TTGCAGATAAAAACCAATAC+AGG | - | chr7_3:32299578-32299597 | Msa1101490:CDS | 30.0% | |
| TTGACTAATAGCAATAGAAC+CGG | + | chr7_3:32299850-32299869 | None:intergenic | 30.0% | |
| ATGCTTAAAATACTACTTCC+TGG | + | chr7_3:32300107-32300126 | None:intergenic | 30.0% | |
| ACTTGTTTCACAAGTTATCT+AGG | - | chr7_3:32300147-32300166 | Msa1101490:intron | 30.0% | |
| CTTGTTTCACAAGTTATCTA+GGG | - | chr7_3:32300148-32300167 | Msa1101490:intron | 30.0% | |
| AAAACAACAAATTTGGGCAA+AGG | - | chr7_3:32300271-32300290 | Msa1101490:intron | 30.0% | |
| TGAAAAAGTTATATTTCGCC+TGG | + | chr7_3:32300582-32300601 | None:intergenic | 30.0% | |
| TCATATCTTAGAGAGAGAAT+AGG | - | chr7_3:32300647-32300666 | Msa1101490:intron | 30.0% | |
| CATATCTTAGAGAGAGAATA+GGG | - | chr7_3:32300648-32300667 | Msa1101490:intron | 30.0% | |
| CGAAAATACAGTGTATTCAT+TGG | - | chr7_3:32300671-32300690 | Msa1101490:intron | 30.0% | |
| TCATGAGAACTTTACAAAAG+TGG | + | chr7_3:32300773-32300792 | None:intergenic | 30.0% | |
| ATGAACTAAATCTCCTTAGT+TGG | - | chr7_3:32300798-32300817 | Msa1101490:intron | 30.0% | |
| ! | AATTGGGTTGTTTAATGGTT+TGG | - | chr7_3:32301103-32301122 | Msa1101490:intron | 30.0% |
| ! | ATTGGGTTGTTTAATGGTTT+GGG | - | chr7_3:32301104-32301123 | Msa1101490:intron | 30.0% |
| AGTAAAAGTGGAGAGTAATA+AGG | + | chr7_3:32301295-32301314 | None:intergenic | 30.0% | |
| !! | ATTACTCTCCACTTTTACTT+TGG | - | chr7_3:32301296-32301315 | Msa1101490:intron | 30.0% |
| CTAAATTGCCAAAGTAAAAG+TGG | + | chr7_3:32301307-32301326 | None:intergenic | 30.0% | |
| ! | TTTGCCAAGAATTTGAAGTT+TGG | + | chr7_3:32301558-32301577 | None:intergenic | 30.0% |
| CATCATTTATCTAAGTTGCA+TGG | - | chr7_3:32301667-32301686 | Msa1101490:CDS | 30.0% | |
| ! | TTTTGACCAGAATTAACAGA+AGG | + | chr7_3:32301697-32301716 | None:intergenic | 30.0% |
| TAATTCTGGTCAAAATGAAC+AGG | - | chr7_3:32301702-32301721 | Msa1101490:CDS | 30.0% | |
| AATTCTGGTCAAAATGAACA+GGG | - | chr7_3:32301703-32301722 | Msa1101490:CDS | 30.0% | |
| ! | ATTAGCAAAAGTGCAACAAC+AGG | - | chr7_3:32299481-32299500 | Msa1101490:CDS | 35.0% |
| AAAACCAATACAGGTTCTTC+TGG | - | chr7_3:32299587-32299606 | Msa1101490:CDS | 35.0% | |
| ATCGTTAAACTTTGTTCCAC+TGG | + | chr7_3:32299648-32299667 | None:intergenic | 35.0% | |
| !! | CTGAAGAAGCATTATGAGAA+TGG | + | chr7_3:32299721-32299740 | None:intergenic | 35.0% |
| CATCAGTGCTAAAAAATCTC+AGG | - | chr7_3:32299781-32299800 | Msa1101490:intron | 35.0% | |
| TCCAATCAATTACCATCATC+CGG | - | chr7_3:32299828-32299847 | Msa1101490:intron | 35.0% | |
| !!! | GTAACTACAGCCATTTTTCT+GGG | - | chr7_3:32299961-32299980 | Msa1101490:intron | 35.0% |
| !!! | TAACTACAGCCATTTTTCTG+GGG | - | chr7_3:32299962-32299981 | Msa1101490:intron | 35.0% |
| ! | AGATGATGATGAACTAGTAG+TGG | + | chr7_3:32299991-32300010 | None:intergenic | 35.0% |
| CAAATTCCACATCAAAGCAT+TGG | - | chr7_3:32300050-32300069 | Msa1101490:intron | 35.0% | |
| TTTAGACCAATGCTTTGATG+TGG | + | chr7_3:32300059-32300078 | None:intergenic | 35.0% | |
| !! | AGCATTGGTCTAAATCACTT+AGG | - | chr7_3:32300065-32300084 | Msa1101490:intron | 35.0% |
| TAAGATGACTAAAGCGTAAG+AGG | + | chr7_3:32300201-32300220 | None:intergenic | 35.0% | |
| CATTCATTTCCTGCACAAAT+GGG | + | chr7_3:32300229-32300248 | None:intergenic | 35.0% | |
| ACATTCATTTCCTGCACAAA+TGG | + | chr7_3:32300230-32300249 | None:intergenic | 35.0% | |
| AAAAGTTATATTTCGCCTGG+CGG | + | chr7_3:32300579-32300598 | None:intergenic | 35.0% | |
| TGAGATTTCATCAAGATCCT+TGG | - | chr7_3:32300709-32300728 | Msa1101490:intron | 35.0% | |
| ATCTCCTTAGTTGGAATTAG+AGG | - | chr7_3:32300807-32300826 | Msa1101490:intron | 35.0% | |
| AGTACCTCTAATTCCAACTA+AGG | + | chr7_3:32300814-32300833 | None:intergenic | 35.0% | |
| GATGTTTCGATAATCACACA+AGG | - | chr7_3:32301012-32301031 | Msa1101490:intron | 35.0% | |
| TCGATAATCACACAAGGTAT+TGG | - | chr7_3:32301018-32301037 | Msa1101490:intron | 35.0% | |
| TAAACGATACGATCGACAAT+TGG | - | chr7_3:32301086-32301105 | Msa1101490:intron | 35.0% | |
| AAACGATACGATCGACAATT+GGG | - | chr7_3:32301087-32301106 | Msa1101490:intron | 35.0% | |
| ! | TCGACAATTGGGTTGTTTAA+TGG | - | chr7_3:32301098-32301117 | Msa1101490:intron | 35.0% |
| TGAGCGATACGTGATAATAT+CGG | - | chr7_3:32301188-32301207 | Msa1101490:intron | 35.0% | |
| ATGTATAAATCGTCTCCTCA+GGG | + | chr7_3:32301416-32301435 | None:intergenic | 35.0% | |
| TATGTATAAATCGTCTCCTC+AGG | + | chr7_3:32301417-32301436 | None:intergenic | 35.0% | |
| AATGATCCTAAGAGAATGCA+AGG | - | chr7_3:32301493-32301512 | Msa1101490:CDS | 35.0% | |
| CACACCAAACTTCAAATTCT+TGG | - | chr7_3:32301551-32301570 | Msa1101490:intron | 35.0% | |
| AACATCAGCCGAACAAAATT+CGG | - | chr7_3:32301576-32301595 | Msa1101490:intron | 35.0% | |
| ! | AAACAAGCCCGAATTTTGTT+CGG | + | chr7_3:32301587-32301606 | None:intergenic | 35.0% |
| TGCTCAATACAAAGGTCATT+AGG | + | chr7_3:32301637-32301656 | None:intergenic | 35.0% | |
| TATGTTGCTGCTCAATACAA+AGG | + | chr7_3:32301645-32301664 | None:intergenic | 35.0% | |
| TTTGTATTGAGCAGCAACAT+AGG | - | chr7_3:32301644-32301663 | Msa1101490:intron | 35.0% | |
| !! | TATCAATCAAGGCACTGTAA+AGG | - | chr7_3:32301732-32301751 | Msa1101490:CDS | 35.0% |
| ATCTGGTTGAGATGCAAAAT+GGG | + | chr7_3:32301839-32301858 | None:intergenic | 35.0% | |
| ! | ATTAGCAAAAGTGCAACAAC+AGG | - | chr7_3:32299481-32299500 | Msa1101490:CDS | 35.0% |
| AAAACCAATACAGGTTCTTC+TGG | - | chr7_3:32299587-32299606 | Msa1101490:CDS | 35.0% | |
| ATCGTTAAACTTTGTTCCAC+TGG | + | chr7_3:32299648-32299667 | None:intergenic | 35.0% | |
| !! | CTGAAGAAGCATTATGAGAA+TGG | + | chr7_3:32299721-32299740 | None:intergenic | 35.0% |
| CATCAGTGCTAAAAAATCTC+AGG | - | chr7_3:32299781-32299800 | Msa1101490:intron | 35.0% | |
| TCCAATCAATTACCATCATC+CGG | - | chr7_3:32299828-32299847 | Msa1101490:intron | 35.0% | |
| !!! | GTAACTACAGCCATTTTTCT+GGG | - | chr7_3:32299961-32299980 | Msa1101490:intron | 35.0% |
| !!! | TAACTACAGCCATTTTTCTG+GGG | - | chr7_3:32299962-32299981 | Msa1101490:intron | 35.0% |
| ! | AGATGATGATGAACTAGTAG+TGG | + | chr7_3:32299991-32300010 | None:intergenic | 35.0% |
| CAAATTCCACATCAAAGCAT+TGG | - | chr7_3:32300050-32300069 | Msa1101490:intron | 35.0% | |
| TTTAGACCAATGCTTTGATG+TGG | + | chr7_3:32300059-32300078 | None:intergenic | 35.0% | |
| !! | AGCATTGGTCTAAATCACTT+AGG | - | chr7_3:32300065-32300084 | Msa1101490:intron | 35.0% |
| TAAGATGACTAAAGCGTAAG+AGG | + | chr7_3:32300201-32300220 | None:intergenic | 35.0% | |
| CATTCATTTCCTGCACAAAT+GGG | + | chr7_3:32300229-32300248 | None:intergenic | 35.0% | |
| ACATTCATTTCCTGCACAAA+TGG | + | chr7_3:32300230-32300249 | None:intergenic | 35.0% | |
| AAAAGTTATATTTCGCCTGG+CGG | + | chr7_3:32300579-32300598 | None:intergenic | 35.0% | |
| TGAGATTTCATCAAGATCCT+TGG | - | chr7_3:32300709-32300728 | Msa1101490:intron | 35.0% | |
| ATCTCCTTAGTTGGAATTAG+AGG | - | chr7_3:32300807-32300826 | Msa1101490:intron | 35.0% | |
| AGTACCTCTAATTCCAACTA+AGG | + | chr7_3:32300814-32300833 | None:intergenic | 35.0% | |
| GATGTTTCGATAATCACACA+AGG | - | chr7_3:32301012-32301031 | Msa1101490:intron | 35.0% | |
| TCGATAATCACACAAGGTAT+TGG | - | chr7_3:32301018-32301037 | Msa1101490:intron | 35.0% | |
| TAAACGATACGATCGACAAT+TGG | - | chr7_3:32301086-32301105 | Msa1101490:intron | 35.0% | |
| AAACGATACGATCGACAATT+GGG | - | chr7_3:32301087-32301106 | Msa1101490:intron | 35.0% | |
| ! | TCGACAATTGGGTTGTTTAA+TGG | - | chr7_3:32301098-32301117 | Msa1101490:intron | 35.0% |
| TGAGCGATACGTGATAATAT+CGG | - | chr7_3:32301188-32301207 | Msa1101490:intron | 35.0% | |
| ATGTATAAATCGTCTCCTCA+GGG | + | chr7_3:32301416-32301435 | None:intergenic | 35.0% | |
| TATGTATAAATCGTCTCCTC+AGG | + | chr7_3:32301417-32301436 | None:intergenic | 35.0% | |
| AATGATCCTAAGAGAATGCA+AGG | - | chr7_3:32301493-32301512 | Msa1101490:CDS | 35.0% | |
| CACACCAAACTTCAAATTCT+TGG | - | chr7_3:32301551-32301570 | Msa1101490:intron | 35.0% | |
| AACATCAGCCGAACAAAATT+CGG | - | chr7_3:32301576-32301595 | Msa1101490:intron | 35.0% | |
| ! | AAACAAGCCCGAATTTTGTT+CGG | + | chr7_3:32301587-32301606 | None:intergenic | 35.0% |
| TGCTCAATACAAAGGTCATT+AGG | + | chr7_3:32301637-32301656 | None:intergenic | 35.0% | |
| TATGTTGCTGCTCAATACAA+AGG | + | chr7_3:32301645-32301664 | None:intergenic | 35.0% | |
| TTTGTATTGAGCAGCAACAT+AGG | - | chr7_3:32301644-32301663 | Msa1101490:intron | 35.0% | |
| !! | TATCAATCAAGGCACTGTAA+AGG | - | chr7_3:32301732-32301751 | Msa1101490:CDS | 35.0% |
| ATCTGGTTGAGATGCAAAAT+GGG | + | chr7_3:32301839-32301858 | None:intergenic | 35.0% | |
| TAACAGTTGGCATCCTTACA+GGG | + | chr7_3:32299622-32299641 | None:intergenic | 40.0% | |
| TGTAGTTGTGCTAATGCATG+GGG | + | chr7_3:32299671-32299690 | None:intergenic | 40.0% | |
| CTGTAGTTGTGCTAATGCAT+GGG | + | chr7_3:32299672-32299691 | None:intergenic | 40.0% | |
| ACTGTAGTTGTGCTAATGCA+TGG | + | chr7_3:32299673-32299692 | None:intergenic | 40.0% | |
| ATGTCCATAGTTGAACAGCT+TGG | + | chr7_3:32299764-32299783 | None:intergenic | 40.0% | |
| ! | ACCGGATGATGGTAATTGAT+TGG | + | chr7_3:32299832-32299851 | None:intergenic | 40.0% |
| ATAGCAATAGAACCGGATGA+TGG | + | chr7_3:32299843-32299862 | None:intergenic | 40.0% | |
| TTCACATGCAAGGCCTTAAT+AGG | - | chr7_3:32299889-32299908 | Msa1101490:intron | 40.0% | |
| ATTCATTTCCCATCGACGTA+TGG | - | chr7_3:32299927-32299946 | Msa1101490:intron | 40.0% | |
| !!! | GGTAACTACAGCCATTTTTC+TGG | - | chr7_3:32299960-32299979 | Msa1101490:intron | 40.0% |
| ATGTGTGAATCATGAGGATG+AGG | + | chr7_3:32300026-32300045 | None:intergenic | 40.0% | |
| ATCCTCATGATTCACACATG+AGG | - | chr7_3:32300027-32300046 | Msa1101490:intron | 40.0% | |
| TTCCAGAAAGTTGGAAGATC+AGG | - | chr7_3:32300428-32300447 | Msa1101490:intron | 40.0% | |
| CAAGGAACTTGATTTCTCCA+AGG | + | chr7_3:32300729-32300748 | None:intergenic | 40.0% | |
| GAGAAATCAAGTTCCTTGCA+TGG | - | chr7_3:32300731-32300750 | Msa1101490:intron | 40.0% | |
| AAGAGTTGAGAATCCATGCA+AGG | + | chr7_3:32300747-32300766 | None:intergenic | 40.0% | |
| ! | GTAATAAGGCGTAAAAGCGT+TGG | + | chr7_3:32301281-32301300 | None:intergenic | 40.0% |
| ACATCAGCCGAACAAAATTC+GGG | - | chr7_3:32301577-32301596 | Msa1101490:intron | 40.0% | |
| !! | GTAAAGGACGAGTTTTCAAG+AGG | - | chr7_3:32301748-32301767 | Msa1101490:intron | 40.0% |
| GCAAAATGGGAAGCAGAATT+TGG | + | chr7_3:32301826-32301845 | None:intergenic | 40.0% | |
| GATCTGGTTGAGATGCAAAA+TGG | + | chr7_3:32301840-32301859 | None:intergenic | 40.0% | |
| TAACAGTTGGCATCCTTACA+GGG | + | chr7_3:32299622-32299641 | None:intergenic | 40.0% | |
| TGTAGTTGTGCTAATGCATG+GGG | + | chr7_3:32299671-32299690 | None:intergenic | 40.0% | |
| CTGTAGTTGTGCTAATGCAT+GGG | + | chr7_3:32299672-32299691 | None:intergenic | 40.0% | |
| ACTGTAGTTGTGCTAATGCA+TGG | + | chr7_3:32299673-32299692 | None:intergenic | 40.0% | |
| ATGTCCATAGTTGAACAGCT+TGG | + | chr7_3:32299764-32299783 | None:intergenic | 40.0% | |
| ! | ACCGGATGATGGTAATTGAT+TGG | + | chr7_3:32299832-32299851 | None:intergenic | 40.0% |
| ATAGCAATAGAACCGGATGA+TGG | + | chr7_3:32299843-32299862 | None:intergenic | 40.0% | |
| TTCACATGCAAGGCCTTAAT+AGG | - | chr7_3:32299889-32299908 | Msa1101490:intron | 40.0% | |
| ATTCATTTCCCATCGACGTA+TGG | - | chr7_3:32299927-32299946 | Msa1101490:intron | 40.0% | |
| !!! | GGTAACTACAGCCATTTTTC+TGG | - | chr7_3:32299960-32299979 | Msa1101490:intron | 40.0% |
| ATGTGTGAATCATGAGGATG+AGG | + | chr7_3:32300026-32300045 | None:intergenic | 40.0% | |
| ATCCTCATGATTCACACATG+AGG | - | chr7_3:32300027-32300046 | Msa1101490:intron | 40.0% | |
| TTCCAGAAAGTTGGAAGATC+AGG | - | chr7_3:32300428-32300447 | Msa1101490:intron | 40.0% | |
| CAAGGAACTTGATTTCTCCA+AGG | + | chr7_3:32300729-32300748 | None:intergenic | 40.0% | |
| GAGAAATCAAGTTCCTTGCA+TGG | - | chr7_3:32300731-32300750 | Msa1101490:intron | 40.0% | |
| AAGAGTTGAGAATCCATGCA+AGG | + | chr7_3:32300747-32300766 | None:intergenic | 40.0% | |
| ! | GTAATAAGGCGTAAAAGCGT+TGG | + | chr7_3:32301281-32301300 | None:intergenic | 40.0% |
| ACATCAGCCGAACAAAATTC+GGG | - | chr7_3:32301577-32301596 | Msa1101490:intron | 40.0% | |
| !! | GTAAAGGACGAGTTTTCAAG+AGG | - | chr7_3:32301748-32301767 | Msa1101490:intron | 40.0% |
| GCAAAATGGGAAGCAGAATT+TGG | + | chr7_3:32301826-32301845 | None:intergenic | 40.0% | |
| GATCTGGTTGAGATGCAAAA+TGG | + | chr7_3:32301840-32301859 | None:intergenic | 40.0% | |
| ! | GCAAAAGTGCAACAACAGGT+AGG | - | chr7_3:32299485-32299504 | Msa1101490:CDS | 45.0% |
| CTGTCCAGAAGAACCTGTAT+TGG | + | chr7_3:32299594-32299613 | None:intergenic | 45.0% | |
| AACAGTTGGCATCCTTACAG+GGG | + | chr7_3:32299621-32299640 | None:intergenic | 45.0% | |
| GTAACAGTTGGCATCCTTAC+AGG | + | chr7_3:32299623-32299642 | None:intergenic | 45.0% | |
| ! | ATGCCAACTGTTACTTCCAG+TGG | - | chr7_3:32299629-32299648 | Msa1101490:CDS | 45.0% |
| GTTCCACTGGAAGTAACAGT+TGG | + | chr7_3:32299635-32299654 | None:intergenic | 45.0% | |
| TGAGCCAAGCTGTTCAACTA+TGG | - | chr7_3:32299757-32299776 | Msa1101490:intron | 45.0% | |
| AGATCCTCTGTTCACATGCA+AGG | - | chr7_3:32299879-32299898 | Msa1101490:intron | 45.0% | |
| GCTGTTGTTGCTGCCTATTA+AGG | + | chr7_3:32299905-32299924 | None:intergenic | 45.0% | |
| TAGTGGTTGCCCCAGAAAAA+TGG | + | chr7_3:32299974-32299993 | None:intergenic | 45.0% | |
| GAATCATGAGGATGAGGTTG+TGG | + | chr7_3:32300020-32300039 | None:intergenic | 45.0% | |
| TGCCTCATGTGTGAATCATG+AGG | + | chr7_3:32300032-32300051 | None:intergenic | 45.0% | |
| GGTGCATAATGATAAGTGCC+AGG | - | chr7_3:32300086-32300105 | Msa1101490:intron | 45.0% | |
| CTTACTCTACCCATTTGTGC+AGG | - | chr7_3:32300217-32300236 | Msa1101490:intron | 45.0% | |
| AATTTCGCCAGGCGAAATAC+TGG | - | chr7_3:32300386-32300405 | Msa1101490:intron | 45.0% | |
| GTCCTGATCTTCCAACTTTC+TGG | + | chr7_3:32300433-32300452 | None:intergenic | 45.0% | |
| AAATTCTGCCTGGCGAAGTA+AGG | - | chr7_3:32300477-32300496 | Msa1101490:intron | 45.0% | |
| GATCCTAAGAGAATGCAAGG+TGG | - | chr7_3:32301496-32301515 | Msa1101490:CDS | 45.0% | |
| GATCCACCTTGCATTCTCTT+AGG | + | chr7_3:32301502-32301521 | None:intergenic | 45.0% | |
| GGGTTGCCTTCTGTTAATTC+TGG | - | chr7_3:32301688-32301707 | Msa1101490:CDS | 45.0% | |
| GGTCAAAATGAACAGGGTAG+TGG | - | chr7_3:32301709-32301728 | Msa1101490:CDS | 45.0% | |
| ! | CAGGGTAGTGGTATCAATCA+AGG | - | chr7_3:32301721-32301740 | Msa1101490:CDS | 45.0% |
| TTCTTTAGCAGCCACTAGCA+TGG | - | chr7_3:32301771-32301790 | Msa1101490:intron | 45.0% | |
| TGTTGTATGTGCCATGCTAG+TGG | + | chr7_3:32301785-32301804 | None:intergenic | 45.0% | |
| ! | GCAAAAGTGCAACAACAGGT+AGG | - | chr7_3:32299485-32299504 | Msa1101490:CDS | 45.0% |
| CTGTCCAGAAGAACCTGTAT+TGG | + | chr7_3:32299594-32299613 | None:intergenic | 45.0% | |
| AACAGTTGGCATCCTTACAG+GGG | + | chr7_3:32299621-32299640 | None:intergenic | 45.0% | |
| GTAACAGTTGGCATCCTTAC+AGG | + | chr7_3:32299623-32299642 | None:intergenic | 45.0% | |
| ! | ATGCCAACTGTTACTTCCAG+TGG | - | chr7_3:32299629-32299648 | Msa1101490:CDS | 45.0% |
| GTTCCACTGGAAGTAACAGT+TGG | + | chr7_3:32299635-32299654 | None:intergenic | 45.0% | |
| TGAGCCAAGCTGTTCAACTA+TGG | - | chr7_3:32299757-32299776 | Msa1101490:intron | 45.0% | |
| AGATCCTCTGTTCACATGCA+AGG | - | chr7_3:32299879-32299898 | Msa1101490:intron | 45.0% | |
| GCTGTTGTTGCTGCCTATTA+AGG | + | chr7_3:32299905-32299924 | None:intergenic | 45.0% | |
| TAGTGGTTGCCCCAGAAAAA+TGG | + | chr7_3:32299974-32299993 | None:intergenic | 45.0% | |
| GAATCATGAGGATGAGGTTG+TGG | + | chr7_3:32300020-32300039 | None:intergenic | 45.0% | |
| TGCCTCATGTGTGAATCATG+AGG | + | chr7_3:32300032-32300051 | None:intergenic | 45.0% | |
| GGTGCATAATGATAAGTGCC+AGG | - | chr7_3:32300086-32300105 | Msa1101490:intron | 45.0% | |
| CTTACTCTACCCATTTGTGC+AGG | - | chr7_3:32300217-32300236 | Msa1101490:intron | 45.0% | |
| AATTTCGCCAGGCGAAATAC+TGG | - | chr7_3:32300386-32300405 | Msa1101490:intron | 45.0% | |
| GTCCTGATCTTCCAACTTTC+TGG | + | chr7_3:32300433-32300452 | None:intergenic | 45.0% | |
| AAATTCTGCCTGGCGAAGTA+AGG | - | chr7_3:32300477-32300496 | Msa1101490:intron | 45.0% | |
| GATCCTAAGAGAATGCAAGG+TGG | - | chr7_3:32301496-32301515 | Msa1101490:CDS | 45.0% | |
| GATCCACCTTGCATTCTCTT+AGG | + | chr7_3:32301502-32301521 | None:intergenic | 45.0% | |
| GGGTTGCCTTCTGTTAATTC+TGG | - | chr7_3:32301688-32301707 | Msa1101490:CDS | 45.0% | |
| GGTCAAAATGAACAGGGTAG+TGG | - | chr7_3:32301709-32301728 | Msa1101490:CDS | 45.0% | |
| ! | CAGGGTAGTGGTATCAATCA+AGG | - | chr7_3:32301721-32301740 | Msa1101490:CDS | 45.0% |
| TTCTTTAGCAGCCACTAGCA+TGG | - | chr7_3:32301771-32301790 | Msa1101490:intron | 45.0% | |
| TGTTGTATGTGCCATGCTAG+TGG | + | chr7_3:32301785-32301804 | None:intergenic | 45.0% | |
| AGCTTGGCTCACTCTTCACT+TGG | + | chr7_3:32299748-32299767 | None:intergenic | 50.0% | |
| AAGGCCTTGCATGTGAACAG+AGG | + | chr7_3:32299886-32299905 | None:intergenic | 50.0% | |
| CATTTCCCATCGACGTATGG+AGG | - | chr7_3:32299930-32299949 | Msa1101490:intron | 50.0% | |
| CGAAATACTGGCGAGCTGAA+TGG | - | chr7_3:32300398-32300417 | Msa1101490:intron | 50.0% | |
| GGCGAAGAGTTCCAGAAAGT+TGG | - | chr7_3:32300419-32300438 | Msa1101490:intron | 50.0% | |
| AGGACAAGAGAACTTCGCCA+TGG | - | chr7_3:32300448-32300467 | Msa1101490:intron | 50.0% | |
| ! | AGGCAGAATTTTGCTCGCCA+TGG | + | chr7_3:32300468-32300487 | None:intergenic | 50.0% |
| ATGGCGAGCAAAATTCTGCC+TGG | - | chr7_3:32300467-32300486 | Msa1101490:intron | 50.0% | |
| GATGAGCTTCCTTCACCAGT+GGG | + | chr7_3:32300536-32300555 | None:intergenic | 50.0% | |
| AGATGAGCTTCCTTCACCAG+TGG | + | chr7_3:32300537-32300556 | None:intergenic | 50.0% | |
| TGATATCGCACTAGTCCCTG+AGG | - | chr7_3:32301398-32301417 | Msa1101490:CDS | 50.0% | |
| !! | AGGTGGATCTGTGTTGACTG+TGG | - | chr7_3:32301513-32301532 | Msa1101490:CDS | 50.0% |
| AGCTTGGCTCACTCTTCACT+TGG | + | chr7_3:32299748-32299767 | None:intergenic | 50.0% | |
| AAGGCCTTGCATGTGAACAG+AGG | + | chr7_3:32299886-32299905 | None:intergenic | 50.0% | |
| CATTTCCCATCGACGTATGG+AGG | - | chr7_3:32299930-32299949 | Msa1101490:intron | 50.0% | |
| CGAAATACTGGCGAGCTGAA+TGG | - | chr7_3:32300398-32300417 | Msa1101490:intron | 50.0% | |
| GGCGAAGAGTTCCAGAAAGT+TGG | - | chr7_3:32300419-32300438 | Msa1101490:intron | 50.0% | |
| AGGACAAGAGAACTTCGCCA+TGG | - | chr7_3:32300448-32300467 | Msa1101490:intron | 50.0% | |
| ! | AGGCAGAATTTTGCTCGCCA+TGG | + | chr7_3:32300468-32300487 | None:intergenic | 50.0% |
| ATGGCGAGCAAAATTCTGCC+TGG | - | chr7_3:32300467-32300486 | Msa1101490:intron | 50.0% | |
| GATGAGCTTCCTTCACCAGT+GGG | + | chr7_3:32300536-32300555 | None:intergenic | 50.0% | |
| AGATGAGCTTCCTTCACCAG+TGG | + | chr7_3:32300537-32300556 | None:intergenic | 50.0% | |
| TGATATCGCACTAGTCCCTG+AGG | - | chr7_3:32301398-32301417 | Msa1101490:CDS | 50.0% | |
| !! | AGGTGGATCTGTGTTGACTG+TGG | - | chr7_3:32301513-32301532 | Msa1101490:CDS | 50.0% |
| CACTGCCTCCATACGTCGAT+GGG | + | chr7_3:32299938-32299957 | None:intergenic | 55.0% | |
| CCTGGCGAAATTTCTCGCCA+TGG | + | chr7_3:32300378-32300397 | None:intergenic | 55.0% | |
| CCATGGCGAGAAATTTCGCC+AGG | - | chr7_3:32300375-32300394 | Msa1101490:intron | 55.0% | |
| TTCTGCCTGGCGAAGTAAGG+CGG | - | chr7_3:32300480-32300499 | Msa1101490:intron | 55.0% | |
| TGAAACCGCCTTACTTCGCC+AGG | + | chr7_3:32300488-32300507 | None:intergenic | 55.0% | |
| AAGGCGGTTTCATCTGAGCC+TGG | - | chr7_3:32300496-32300515 | Msa1101490:intron | 55.0% | |
| ! | TTCATCTGAGCCTGGTGACG+TGG | - | chr7_3:32300504-32300523 | Msa1101490:intron | 55.0% |
| TGGCAGAAACCCACTGGTGA+AGG | - | chr7_3:32300524-32300543 | Msa1101490:intron | 55.0% | |
| GAAGGAAGCTCATCTCGCCA+TGG | - | chr7_3:32300542-32300561 | Msa1101490:intron | 55.0% | |
| TGGCGGAATTTGTCTCGCCA+TGG | + | chr7_3:32300562-32300581 | None:intergenic | 55.0% | |
| ATGGCGAGACAAATTCCGCC+AGG | - | chr7_3:32300561-32300580 | Msa1101490:intron | 55.0% | |
| CACTGCCTCCATACGTCGAT+GGG | + | chr7_3:32299938-32299957 | None:intergenic | 55.0% | |
| CCTGGCGAAATTTCTCGCCA+TGG | + | chr7_3:32300378-32300397 | None:intergenic | 55.0% | |
| CCATGGCGAGAAATTTCGCC+AGG | - | chr7_3:32300375-32300394 | Msa1101490:intron | 55.0% | |
| TTCTGCCTGGCGAAGTAAGG+CGG | - | chr7_3:32300480-32300499 | Msa1101490:intron | 55.0% | |
| TGAAACCGCCTTACTTCGCC+AGG | + | chr7_3:32300488-32300507 | None:intergenic | 55.0% | |
| AAGGCGGTTTCATCTGAGCC+TGG | - | chr7_3:32300496-32300515 | Msa1101490:intron | 55.0% | |
| ! | TTCATCTGAGCCTGGTGACG+TGG | - | chr7_3:32300504-32300523 | Msa1101490:intron | 55.0% |
| TGGCAGAAACCCACTGGTGA+AGG | - | chr7_3:32300524-32300543 | Msa1101490:intron | 55.0% | |
| GAAGGAAGCTCATCTCGCCA+TGG | - | chr7_3:32300542-32300561 | Msa1101490:intron | 55.0% | |
| TGGCGGAATTTGTCTCGCCA+TGG | + | chr7_3:32300562-32300581 | None:intergenic | 55.0% | |
| ATGGCGAGACAAATTCCGCC+AGG | - | chr7_3:32300561-32300580 | Msa1101490:intron | 55.0% | |
| CTGGACAGCAGTCCCCTGTA+AGG | - | chr7_3:32299606-32299625 | Msa1101490:CDS | 60.0% | |
| CCACTGCCTCCATACGTCGA+TGG | + | chr7_3:32299939-32299958 | None:intergenic | 60.0% | |
| CCATCGACGTATGGAGGCAG+TGG | - | chr7_3:32299936-32299955 | Msa1101490:intron | 60.0% | |
| TCGACGTATGGAGGCAGTGG+TGG | - | chr7_3:32299939-32299958 | Msa1101490:intron | 60.0% | |
| GGGCAAAGGCAATCTCGCCA+TGG | - | chr7_3:32300285-32300304 | Msa1101490:intron | 60.0% | |
| CGAGCCACTGGCGAGCTAAA+AGG | - | chr7_3:32300308-32300327 | Msa1101490:intron | 60.0% | |
| !!! | CTCGCCTTTTAGCTCGCCAG+TGG | + | chr7_3:32300315-32300334 | None:intergenic | 60.0% |
| GAGCAACTCCAGAGAGCTCC+AGG | - | chr7_3:32300332-32300351 | Msa1101490:intron | 60.0% | |
| ATCTCTGTGGCGAAGTGGCC+TGG | + | chr7_3:32300353-32300372 | None:intergenic | 60.0% | |
| AGGCCACTTCGCCACAGAGA+TGG | - | chr7_3:32300352-32300371 | Msa1101490:intron | 60.0% | |
| TGGCCATCTCTGTGGCGAAG+TGG | + | chr7_3:32300358-32300377 | None:intergenic | 60.0% | |
| CTTCGCCACAGAGATGGCCA+TGG | - | chr7_3:32300358-32300377 | Msa1101490:intron | 60.0% | |
| TCTCGCCATGGCCATCTCTG+TGG | + | chr7_3:32300366-32300385 | None:intergenic | 60.0% | |
| CAGCTCGCCAGTATTTCGCC+TGG | + | chr7_3:32300396-32300415 | None:intergenic | 60.0% | |
| TGGGTTTCTGCCACGTCACC+AGG | + | chr7_3:32300517-32300536 | None:intergenic | 60.0% | |
| GTGACGTGGCAGAAACCCAC+TGG | - | chr7_3:32300518-32300537 | Msa1101490:intron | 60.0% | |
| CTGGACAGCAGTCCCCTGTA+AGG | - | chr7_3:32299606-32299625 | Msa1101490:CDS | 60.0% | |
| CCACTGCCTCCATACGTCGA+TGG | + | chr7_3:32299939-32299958 | None:intergenic | 60.0% | |
| CCATCGACGTATGGAGGCAG+TGG | - | chr7_3:32299936-32299955 | Msa1101490:intron | 60.0% | |
| TCGACGTATGGAGGCAGTGG+TGG | - | chr7_3:32299939-32299958 | Msa1101490:intron | 60.0% | |
| GGGCAAAGGCAATCTCGCCA+TGG | - | chr7_3:32300285-32300304 | Msa1101490:intron | 60.0% | |
| CGAGCCACTGGCGAGCTAAA+AGG | - | chr7_3:32300308-32300327 | Msa1101490:intron | 60.0% | |
| !!! | CTCGCCTTTTAGCTCGCCAG+TGG | + | chr7_3:32300315-32300334 | None:intergenic | 60.0% |
| GAGCAACTCCAGAGAGCTCC+AGG | - | chr7_3:32300332-32300351 | Msa1101490:intron | 60.0% | |
| ATCTCTGTGGCGAAGTGGCC+TGG | + | chr7_3:32300353-32300372 | None:intergenic | 60.0% | |
| AGGCCACTTCGCCACAGAGA+TGG | - | chr7_3:32300352-32300371 | Msa1101490:intron | 60.0% | |
| TGGCCATCTCTGTGGCGAAG+TGG | + | chr7_3:32300358-32300377 | None:intergenic | 60.0% | |
| CTTCGCCACAGAGATGGCCA+TGG | - | chr7_3:32300358-32300377 | Msa1101490:intron | 60.0% | |
| TCTCGCCATGGCCATCTCTG+TGG | + | chr7_3:32300366-32300385 | None:intergenic | 60.0% | |
| CAGCTCGCCAGTATTTCGCC+TGG | + | chr7_3:32300396-32300415 | None:intergenic | 60.0% | |
| TGGGTTTCTGCCACGTCACC+AGG | + | chr7_3:32300517-32300536 | None:intergenic | 60.0% | |
| GTGACGTGGCAGAAACCCAC+TGG | - | chr7_3:32300518-32300537 | Msa1101490:intron | 60.0% | |
| ATCTCGCCATGGCGAGCCAC+TGG | - | chr7_3:32300296-32300315 | Msa1101490:intron | 65.0% | |
| CGAAGTGGCCTGGAGCTCTC+TGG | + | chr7_3:32300343-32300362 | None:intergenic | 65.0% | |
| ATCTCGCCATGGCGAGCCAC+TGG | - | chr7_3:32300296-32300315 | Msa1101490:intron | 65.0% | |
| CGAAGTGGCCTGGAGCTCTC+TGG | + | chr7_3:32300343-32300362 | None:intergenic | 65.0% | |
| AGCTCGCCAGTGGCTCGCCA+TGG | + | chr7_3:32300305-32300324 | None:intergenic | 70.0% | |
| AGCTCGCCAGTGGCTCGCCA+TGG | + | chr7_3:32300305-32300324 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 32299467 | 32301870 | 32299467 | ID=Msa1101490;Name=Msa1101490 |
| chr7_3 | mRNA | 32299467 | 32301870 | 32299467 | ID=Msa1101490-mRNA-1;Parent=Msa1101490;Name=Msa1101490-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|4|0|196 |
| chr7_3 | exon | 32301835 | 32301870 | 32301835 | ID=Msa1101490-mRNA-1:exon:7035;Parent=Msa1101490-mRNA-1 |
| chr7_3 | exon | 32301647 | 32301753 | 32301647 | ID=Msa1101490-mRNA-1:exon:7034;Parent=Msa1101490-mRNA-1 |
| chr7_3 | exon | 32301377 | 32301534 | 32301377 | ID=Msa1101490-mRNA-1:exon:7033;Parent=Msa1101490-mRNA-1 |
| chr7_3 | exon | 32299467 | 32299753 | 32299467 | ID=Msa1101490-mRNA-1:exon:7032;Parent=Msa1101490-mRNA-1 |
| chr7_3 | CDS | 32301835 | 32301870 | 32301835 | ID=Msa1101490-mRNA-1:cds;Parent=Msa1101490-mRNA-1 |
| chr7_3 | CDS | 32301647 | 32301753 | 32301647 | ID=Msa1101490-mRNA-1:cds;Parent=Msa1101490-mRNA-1 |
| chr7_3 | CDS | 32301377 | 32301534 | 32301377 | ID=Msa1101490-mRNA-1:cds;Parent=Msa1101490-mRNA-1 |
| chr7_3 | CDS | 32299467 | 32299753 | 32299467 | ID=Msa1101490-mRNA-1:cds;Parent=Msa1101490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
