AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0036920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0036920 MtrunA17_Chr1g0199511 95.212 1295 57 3 1 1291 1 1294 0.0 2542
Msa0036920 MtrunA17_Chr3g0116441 45.669 381 169 7 292 635 173 552 5.32e-100 351
Msa0036920 MtrunA17_Chr3g0116441 43.147 197 71 3 3 197 5 162 1.87e-39 160
Msa0036920 MtrunA17_Chr3g0116441 36.800 125 75 3 700 821 766 889 1.28e-15 82.8
Msa0036920 MtrunA17_Chr5g0410721 49.246 199 97 1 291 485 233 431 1.64e-57 215
Msa0036920 MtrunA17_Chr1g0164731 45.213 188 99 1 291 474 189 376 9.41e-51 190
Msa0036920 MtrunA17_Chr1g0164761 44.785 163 86 1 316 474 159 321 4.08e-45 172
Msa0036920 MtrunA17_Chr2g0303101 40.426 235 136 3 295 528 264 495 2.26e-43 172
Msa0036920 MtrunA17_Chr5g0397501 37.795 254 142 5 266 516 365 605 3.86e-41 166
Msa0036920 MtrunA17_Chr8g0380981 39.381 226 117 3 272 492 239 449 4.29e-41 165
Msa0036920 MtrunA17_Chr1g0189211 44.324 185 90 2 295 474 361 537 2.12e-39 160
Msa0036920 MtrunA17_Chr7g0261401 35.359 181 115 2 295 474 338 517 1.26e-26 118
Msa0036920 MtrunA17_Chr7g0214951 40.000 120 50 3 320 434 99 201 7.58e-21 92.8
Msa0036920 MtrunA17_Chr1g0197421 68.293 41 13 0 13 53 1 41 3.48e-14 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0036920 AT5G04240.1 52.503 939 363 20 1 917 1 878 0.0 924
Msa0036920 AT3G48430.1 47.154 369 156 8 297 635 206 565 4.38e-97 341
Msa0036920 AT3G48430.1 46.032 189 79 4 9 194 13 181 5.51e-34 143
Msa0036920 AT3G48430.1 34.286 140 87 4 700 836 737 874 6.55e-15 80.9
Msa0036920 AT5G46910.2 47.317 205 103 2 275 474 230 434 2.56e-56 208
Msa0036920 AT5G46910.1 47.317 205 103 2 275 474 230 434 5.09e-56 210
Msa0036920 AT2G34880.1 30.149 471 227 13 16 474 61 441 6.43e-45 176
Msa0036920 AT1G63490.1 41.530 183 98 2 295 474 130 306 1.73e-40 164
Msa0036920 AT1G63490.4 41.530 183 98 2 295 474 383 559 2.00e-40 164
Msa0036920 AT1G63490.2 41.530 183 98 2 295 474 383 559 2.12e-40 164
Msa0036920 AT4G20400.1 42.268 194 99 2 291 479 263 448 2.47e-40 162
Msa0036920 AT4G20400.2 42.857 189 95 2 291 474 206 386 3.29e-40 162
Msa0036920 AT1G08620.2 44.565 184 99 1 291 474 361 541 3.66e-39 159
Msa0036920 AT1G08620.4 44.565 184 99 1 291 474 361 541 3.66e-39 159
Msa0036920 AT1G08620.1 44.565 184 99 1 291 474 361 541 3.66e-39 159
Msa0036920 AT1G08620.3 44.565 184 99 1 291 474 375 555 3.81e-39 159
Msa0036920 AT1G30810.3 43.716 183 94 2 295 474 265 441 6.13e-38 154
Msa0036920 AT1G30810.2 43.716 183 94 2 295 474 265 441 6.13e-38 154
Msa0036920 AT1G30810.1 43.716 183 94 2 295 474 265 441 6.13e-38 154
Msa0036920 AT2G38950.1 31.746 189 110 3 294 475 293 469 1.00e-23 108
Msa0036920 AT3G48430.2 33.023 215 105 8 451 635 1 206 8.42e-19 93.6
Msa0036920 AT3G48430.2 34.286 140 87 4 700 836 378 515 4.99e-15 81.3
Msa0036920 AT1G63490.3 39.535 86 52 0 389 474 15 100 2.59e-14 79.0

Find 349 sgRNAs with CRISPR-Local

Find 628 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTTACCTTTGAAGAAAT+TGG 0.073340 1_1:-65762708 None:intergenic
TTTCCCCAAATCCCCAATTT+AGG 0.114967 1_1:+65762733 Msa0036920:five_prime_UTR
GCCAGCTGCTTTGAAACTTT+TGG 0.142212 1_1:+65765237 Msa0036920:intron
GAGCAGAAAGCTGGTAAATT+TGG 0.160512 1_1:+65762984 Msa0036920:CDS
TACCAATGGCTTCAGTAATT+TGG 0.188357 1_1:-65769766 None:intergenic
TATTGCATCCCCAGAAAATT+TGG 0.189649 1_1:+65769061 Msa0036920:CDS
ACCTTTCCATGTGCATTTAA+AGG 0.190859 1_1:-65771039 None:intergenic
AGGGCTGCGGTCTTTCTTTC+AGG 0.194000 1_1:+65771147 Msa0036920:three_prime_UTR
GGTTGTATTAATGTCATAAA+TGG 0.206343 1_1:-65767457 None:intergenic
TTGAAAATATTCATTCATTT+TGG 0.209449 1_1:+65771229 Msa0036920:three_prime_UTR
ATTGCACGATGAAGTGATTT+TGG 0.213832 1_1:+65770258 Msa0036920:CDS
GTGCTTATAATTTGCCATTC+AGG 0.214739 1_1:+65768446 Msa0036920:CDS
GTCCTGGTTTATCTTTAAAT+TGG 0.217100 1_1:+65769246 Msa0036920:CDS
GTAGCAATCTTCTCAGTTCT+TGG 0.217831 1_1:-65770738 None:intergenic
TCTTCGGCCTGGTTATTAAT+TGG 0.218887 1_1:-65769932 None:intergenic
AATTCTTGGAAAACGGGTTC+TGG 0.220595 1_1:+65763128 Msa0036920:CDS
CATCCAAGTTTACTGTATTA+TGG 0.226259 1_1:-65770120 None:intergenic
GCAAAGTAGAGTGCGAAATT+TGG 0.226627 1_1:-65762609 None:intergenic
CACTTTGCCAAACTTGCTTA+TGG 0.231366 1_1:-65763262 None:intergenic
TTCGAATACTGAAAAGAAAA+TGG 0.233515 1_1:+65770447 Msa0036920:CDS
CTGCTTGGAGCATGCTGTTC+AGG 0.235544 1_1:+65768388 Msa0036920:CDS
TTGAATACATGAGTCTTCTT+TGG 0.238673 1_1:-65770419 None:intergenic
TATTAATTTCATTTGTTGTT+AGG 0.239258 1_1:+65771530 Msa0036920:three_prime_UTR
TCTGATTTAGCTTCTACTTC+TGG 0.243338 1_1:+65767244 Msa0036920:CDS
AGAACATCCTATTTCTGATA+TGG 0.244065 1_1:-65770374 None:intergenic
CATTAGTTATATTCTCGTTT+TGG 0.254149 1_1:-65770303 None:intergenic
GGGGCCAGATATTAGTTCTT+TGG 0.261679 1_1:+65763097 Msa0036920:CDS
TAGTGGGAGCTTCAGCATTC+TGG 0.262846 1_1:-65769619 None:intergenic
AGCTTGACACAGACAATTTC+AGG 0.263346 1_1:+65769534 Msa0036920:CDS
ATGACATATGCACATGTTAT+AGG 0.263469 1_1:-65771261 None:intergenic
CTTTCTGACCATAAGCATTC+TGG 0.264244 1_1:+65771299 Msa0036920:three_prime_UTR
AAAACCCTAAATTGGGGATT+TGG 0.264931 1_1:-65762738 None:intergenic
AAACCCTAAATTGGGGATTT+GGG 0.267181 1_1:-65762737 None:intergenic
ATCCCCAATGCTAGCGTAAA+AGG 0.275717 1_1:-65769206 None:intergenic
AAGCTGCTATCCATTCTTCT+TGG 0.284198 1_1:+65767148 Msa0036920:CDS
GTTGATTTACTACCAGATTC+TGG 0.284705 1_1:+65767205 Msa0036920:CDS
GGGCTAGGACAGAGCATCTA+AGG 0.287975 1_1:+65771087 Msa0036920:three_prime_UTR
GTATCAGTTGGTCGAAATTC+AGG 0.292950 1_1:-65762924 None:intergenic
GGTTAGCTAGCTGTAAATTA+AGG 0.293711 1_1:+65771320 Msa0036920:three_prime_UTR
CGCCGTACCCAAAACGCTTC+TGG 0.297279 1_1:-65763333 None:intergenic
TCTCGGTTTGAGAACATTCC+TGG 0.298579 1_1:-65770516 None:intergenic
TGTCACTTCCAAACTGATTC+AGG 0.303320 1_1:+65767397 Msa0036920:CDS
CAAGTTATTCCTCGTGCTTC+AGG 0.304366 1_1:+65763773 Msa0036920:CDS
CTAATATCTGGCCCCAATTC+AGG 0.307902 1_1:-65763089 None:intergenic
TGCTTCTGCAAAGGATTTGC+CGG 0.310347 1_1:+65768298 Msa0036920:CDS
GGGCCAGATATTAGTTCTTT+GGG 0.310595 1_1:+65763098 Msa0036920:CDS
TTCCCCAAATCCCCAATTTA+GGG 0.313493 1_1:+65762734 Msa0036920:five_prime_UTR
AGTATAACCATATCAGAAAT+AGG 0.315470 1_1:+65770367 Msa0036920:CDS
CTTTGGGTGCTGGTAATTCT+TGG 0.316778 1_1:+65763114 Msa0036920:CDS
TAAAGTCATAGCAATCAAAT+TGG 0.320966 1_1:-65770689 None:intergenic
TGTCAGAACAATAAATATTC+TGG 0.322990 1_1:+65769695 Msa0036920:CDS
AAGAGAGATTCTAGTAAAAC+AGG 0.323540 1_1:+65767096 Msa0036920:CDS
TTAGCATACTCCACATAAAT+AGG 0.324402 1_1:-65763413 None:intergenic
TTTCTTCCCAGCATTTGATC+TGG 0.329191 1_1:-65770635 None:intergenic
CTAACCACTTCCAAATGAAT+TGG 0.337520 1_1:-65771369 None:intergenic
AAGACTTGGTACTCCGTTCC+TGG 0.339475 1_1:+65763938 Msa0036920:CDS
TGTAGACTATCCGAAAATAA+AGG 0.339555 1_1:+65768974 Msa0036920:intron
AGGAAAATCCAGTAGCTAAA+AGG 0.341139 1_1:+65770796 Msa0036920:three_prime_UTR
AGCAGAAAGCTGGTAAATTT+GGG 0.341520 1_1:+65762985 Msa0036920:CDS
ATTTCTTTATCATCATTTAG+AGG 0.342109 1_1:-65770031 None:intergenic
GACGTGCCTGGTTCGGCGTT+TGG 0.346548 1_1:+65763437 Msa0036920:CDS
TTCATTCTCTGAATGTTGTC+AGG 0.348652 1_1:-65769320 None:intergenic
CCTGAGGTAGTTGTTGCATC+TGG 0.348719 1_1:+65765283 Msa0036920:CDS
TTCTACTTCTGGAACCTATA+TGG 0.352611 1_1:+65767255 Msa0036920:CDS
CCTTTCCATGTGCATTTAAA+GGG 0.355632 1_1:-65771038 None:intergenic
ATTAATTTCATTTGTTGTTA+GGG 0.357043 1_1:+65771531 Msa0036920:three_prime_UTR
GGTGGTGATGTTGATCAATT+AGG 0.359563 1_1:+65764007 Msa0036920:CDS
ACCAACTGAGAAATTGATAA+TGG 0.362895 1_1:+65767477 Msa0036920:CDS
CAAAGTAGAGTGCGAAATTT+GGG 0.363046 1_1:-65762608 None:intergenic
TGAGGCTTCACAGCCTTCTA+AGG 0.364910 1_1:+65763676 Msa0036920:CDS
TGTGTGGGTTGTGGAATACT+TGG 0.365624 1_1:+65767430 Msa0036920:CDS
TGCTCAATGCCCAATTCATT+TGG 0.366458 1_1:+65771359 Msa0036920:three_prime_UTR
TGCTTACCTTTGAAGAAATT+GGG 0.368539 1_1:-65762707 None:intergenic
TGAATACATGAGTCTTCTTT+GGG 0.371012 1_1:-65770418 None:intergenic
TCTTCAACTAGATGATTATC+AGG 0.371697 1_1:-65767505 None:intergenic
ACATTGGTATGTTGTTTAGT+TGG 0.376959 1_1:+65763852 Msa0036920:CDS
GGCAACCCTTCAAGCCAATT+GGG 0.379995 1_1:-65762894 None:intergenic
ATCTTTGAGATATAAGCAAT+TGG 0.382855 1_1:-65762960 None:intergenic
GAGCATCTAAGGGTGCATAC+TGG 0.383899 1_1:+65771098 Msa0036920:three_prime_UTR
TGGCAACCCTTCAAGCCAAT+TGG 0.386954 1_1:-65762895 None:intergenic
TAGACTTCTAGCGTTATTAG+AGG 0.391254 1_1:+65771389 Msa0036920:three_prime_UTR
CACAGAAAGCTCGATCTAAA+AGG 0.392381 1_1:+65769273 Msa0036920:CDS
CATGTGTCCATAAGCAAGTT+TGG 0.392827 1_1:+65763255 Msa0036920:CDS
ATTTGACATGTCCGCCATAT+AGG 0.394452 1_1:-65767269 None:intergenic
TGCTGGTAATTCTTGGAAAA+CGG 0.395089 1_1:+65763121 Msa0036920:CDS
AAGTAAGTCTTTGACTGAAA+TGG 0.395480 1_1:+65770000 Msa0036920:CDS
GAAGGCTGTGAAGCCTCATT+TGG 0.397557 1_1:-65763671 None:intergenic
AGAAACTGCTTCAATATTCA+AGG 0.398497 1_1:+65769387 Msa0036920:CDS
CTAGCTAACCAGAATGCTTA+TGG 0.400628 1_1:-65771307 None:intergenic
TCCTCATCAACTCTAGTAAT+GGG 0.401920 1_1:-65770478 None:intergenic
GCAGAAGCATAAAGCTCTCT+TGG 0.402187 1_1:-65770091 None:intergenic
AAATTTGGCTTTGATAGATC+TGG 0.402588 1_1:+65769076 Msa0036920:CDS
CCAATTCAGGCCGCTTCAAA+AGG 0.403868 1_1:-65763076 None:intergenic
CTTCCATAATACAGTAAACT+TGG 0.404160 1_1:+65770117 Msa0036920:CDS
ATTCTTGGAAAACGGGTTCT+GGG 0.404488 1_1:+65763129 Msa0036920:CDS
AGCATCTAAGGGTGCATACT+GGG 0.404544 1_1:+65771099 Msa0036920:three_prime_UTR
TACACTAGTAAGCTGTAAAC+AGG 0.404878 1_1:-65771627 None:intergenic
GGTGGCAGAGAAAATGTAAA+TGG 0.408244 1_1:+65770547 Msa0036920:CDS
CCAATGCTCCTGAATCAGTT+TGG 0.409699 1_1:-65767405 None:intergenic
CAACATACCAATGTATATCA+TGG 0.410757 1_1:-65763843 None:intergenic
TGGCGATATTTGCCAGAATC+TGG 0.411094 1_1:-65767217 None:intergenic
CCCTCAACCTTACATTGATA+AGG 0.411482 1_1:-65771128 None:intergenic
TTGATAGATCTGGCAATTGA+TGG 0.412000 1_1:+65769086 Msa0036920:CDS
TGCTAATGACGTGCCTGGTT+CGG 0.412477 1_1:+65763430 Msa0036920:CDS
GCATTGGTTTGTGTGGGTTG+TGG 0.412625 1_1:+65767421 Msa0036920:CDS
TCTGAAATCATCTCCTTAGA+AGG 0.412686 1_1:-65763689 None:intergenic
TGTGATAACTTAGATTTAGA+TGG 0.413591 1_1:+65769794 Msa0036920:CDS
ACACCAGGTAATAGTGTTCT+TGG 0.413876 1_1:-65767037 None:intergenic
GTCATCGAAGGCAACGGAAA+AGG 0.422246 1_1:+65763486 Msa0036920:CDS
TTCTTCCCAGCATTTGATCT+GGG 0.423011 1_1:-65770634 None:intergenic
AAAGCAAAGGCATAATTTCC+AGG 0.424207 1_1:-65763956 None:intergenic
TGTGGGGAGGCTGCTAACTT+TGG 0.426461 1_1:+65766412 Msa0036920:CDS
TGTTGTTTAGTTGGTTTGCC+TGG 0.426727 1_1:+65763861 Msa0036920:CDS
AATGAAGGATGATCAATTGC+AGG 0.426909 1_1:+65769337 Msa0036920:CDS
ACAGAGAAACAACTTTGCTT+TGG 0.427172 1_1:-65769422 None:intergenic
GGAGTCTTCAAAGCAGAGTC+TGG 0.427940 1_1:+65770279 Msa0036920:CDS
CATCTGGGATTCCTTGCTGC+AGG 0.429913 1_1:+65765299 Msa0036920:CDS
GAAATCCCCAATTGGCTTGA+AGG 0.430083 1_1:+65762888 Msa0036920:CDS
AGCAGGCACAGGCGGAAAAC+AGG 0.431896 1_1:+65771185 Msa0036920:three_prime_UTR
TATCTCTTCTGCAACTGCCC+TGG 0.435108 1_1:-65769003 None:intergenic
GCTGGTAATTCTTGGAAAAC+GGG 0.437570 1_1:+65763122 Msa0036920:CDS
TGCTAACCCTTTCTTCGGCC+TGG 0.438829 1_1:-65769943 None:intergenic
CCATGTCATTCAAGTGGTCA+TGG 0.439817 1_1:+65771066 Msa0036920:three_prime_UTR
GTGGGGAGGCTGCTAACTTT+GGG 0.443634 1_1:+65766413 Msa0036920:CDS
AGAATTGCTAACCCTTTCTT+CGG 0.444382 1_1:-65769948 None:intergenic
CCACAGTAGCGAGAGCAGTT+TGG 0.444635 1_1:-65769892 None:intergenic
CCAAACTGATTCAGGAGCAT+TGG 0.446262 1_1:+65767405 Msa0036920:CDS
GGAAGCTTTCAAATAGTCCT+TGG 0.448245 1_1:+65763744 Msa0036920:CDS
TCTGGGGATGCAATATCCAT+TGG 0.451020 1_1:-65769053 None:intergenic
ACATGAGTCTTCTTTGGGAC+AGG 0.452410 1_1:-65770413 None:intergenic
GATATTAGTTCTTTGGGTGC+TGG 0.455358 1_1:+65763104 Msa0036920:CDS
AATCCTACATGATAAGCTCT+TGG 0.455827 1_1:-65765525 None:intergenic
CTGAGGTAGTTGTTGCATCT+GGG 0.455880 1_1:+65765284 Msa0036920:CDS
CGAAAATAAAGGCACATGCC+AGG 0.458389 1_1:+65768985 Msa0036920:CDS
TTCATGCCAGATGATATTCC+TGG 0.459210 1_1:+65763809 Msa0036920:CDS
TATTCTGGCTCACTTACAAA+TGG 0.459824 1_1:+65769710 Msa0036920:CDS
CATTCAAGTGGTCATGGGCT+AGG 0.460298 1_1:+65771072 Msa0036920:three_prime_UTR
TACTACAAGGCAACAGGAAG+TGG 0.460339 1_1:+65763187 Msa0036920:CDS
TCCATTATCAATTTCTCAGT+TGG 0.460695 1_1:-65767478 None:intergenic
GTCATCCGCACAGAGGGTTA+TGG 0.461806 1_1:+65763986 Msa0036920:CDS
TTTGAAGGCTTGGGCAATGG+TGG 0.462057 1_1:-65763023 None:intergenic
CGAGGAACTGAAGCTTCGGC+AGG 0.462685 1_1:-65770828 None:intergenic
GCACCCAAAGAACTAATATC+TGG 0.464511 1_1:-65763101 None:intergenic
CGTGTTTACTACAAGGCAAC+AGG 0.465200 1_1:+65763181 Msa0036920:CDS
GGAGCATGCTGTTCAGGTTG+TGG 0.466494 1_1:+65768394 Msa0036920:CDS
TGGTTGTAGAGGCCATGTTT+TGG 0.466623 1_1:+65763372 Msa0036920:CDS
AGTTGGAGAAAGTGGCGAAC+AGG 0.469224 1_1:+65770165 Msa0036920:CDS
AGTATTCCCAATTTCTTCAA+AGG 0.473480 1_1:+65762701 Msa0036920:five_prime_UTR
TGTGCATATGTCATATAGTA+AGG 0.478288 1_1:+65771270 Msa0036920:three_prime_UTR
TCTCTCTTTCTTCTTTCTGA+CGG 0.478936 1_1:-65767081 None:intergenic
TTCCTCATCAACTCTAGTAA+TGG 0.480378 1_1:-65770479 None:intergenic
ATTTATTGTTCTGACAATCC+TGG 0.480717 1_1:-65769688 None:intergenic
GGCGAAGGATGTTTCTCCAT+TGG 0.480903 1_1:+65763352 Msa0036920:CDS
AACACGATTCTGCATGACTT+GGG 0.483343 1_1:-65763607 None:intergenic
TTAATAACCAGGCCGAAGAA+AGG 0.485006 1_1:+65769936 Msa0036920:CDS
TTGCTACAGGCAAAAGTGTA+GGG 0.485030 1_1:+65770754 Msa0036920:three_prime_UTR
GGTTAAGCAAAATAGCGAAA+TGG 0.485694 1_1:-65762664 None:intergenic
GTTGATTTGTCACAAGATGA+TGG 0.492026 1_1:+65770577 Msa0036920:CDS
AAGGACTGATTATAAGAGTA+GGG 0.492783 1_1:+65763505 Msa0036920:CDS
TTTCCAAGAGCTTATCATGT+AGG 0.493613 1_1:+65765522 Msa0036920:CDS
GCAAGTAAAGCAGTTGCTGA+TGG 0.493864 1_1:-65766510 None:intergenic
TGTTTGTAAAGAAACTGAAA+TGG 0.495743 1_1:+65763538 Msa0036920:CDS
TAGAAGCTAAATCAGACAAC+TGG 0.497172 1_1:-65767237 None:intergenic
GATTCCTCTCTGAACTCTGT+TGG 0.497914 1_1:+65767526 Msa0036920:CDS
TAACCACTTCCAAATGAATT+GGG 0.498461 1_1:-65771368 None:intergenic
CACTCGTTCAATGACTGATC+CGG 0.498733 1_1:-65768317 None:intergenic
CAATTGCAGGAAAGAATTGA+TGG 0.499509 1_1:+65769350 Msa0036920:CDS
TTGATTTGTCACAAGATGAT+GGG 0.499538 1_1:+65770578 Msa0036920:CDS
TAATAACCAGGCCGAAGAAA+GGG 0.499765 1_1:+65769937 Msa0036920:CDS
CTTGCGAGGAACTGAAGCTT+CGG 0.502058 1_1:-65770832 None:intergenic
GCCTTATCAATGTAAGGTTG+AGG 0.502406 1_1:+65771127 Msa0036920:three_prime_UTR
TGAACGAGTGCAATAAATGT+TGG 0.502758 1_1:+65768330 Msa0036920:CDS
TTCGGCGTTTGGAGAATCAC+AGG 0.504268 1_1:+65763448 Msa0036920:CDS
AACTTGATGAATGTGAAGAT+TGG 0.506062 1_1:+65769114 Msa0036920:CDS
GTGCAACTGTAACTCAGCCT+TGG 0.506411 1_1:-65770922 None:intergenic
GAACGACAAGTTGGAGAAAG+TGG 0.507919 1_1:+65770157 Msa0036920:CDS
TCTTTGAGATATAAGCAATT+GGG 0.508742 1_1:-65762959 None:intergenic
AATGATATGCAAGGCACTGC+TGG 0.508938 1_1:+65763719 Msa0036920:CDS
TGTAAACAGGACTATGTAAG+AGG 0.512083 1_1:-65771614 None:intergenic
GTATCTAGTTATGTTGCAAA+AGG 0.512305 1_1:+65770334 Msa0036920:CDS
TTCAGGAGCATTGGTTTGTG+TGG 0.513204 1_1:+65767414 Msa0036920:CDS
CCTTATCAATGTAAGGTTGA+GGG 0.513587 1_1:+65771128 Msa0036920:three_prime_UTR
TACTTGAGACTGCACTATGA+AGG 0.513981 1_1:-65767552 None:intergenic
CGCACCCTTCATGTGGGCAA+AGG 0.514323 1_1:-65770953 None:intergenic
CCCTTTAAATGCACATGGAA+AGG 0.514499 1_1:+65771038 Msa0036920:three_prime_UTR
ATGCCCAATTCATTTGGAAG+TGG 0.515269 1_1:+65771365 Msa0036920:three_prime_UTR
AAAGGACTGATTATAAGAGT+AGG 0.515773 1_1:+65763504 Msa0036920:CDS
TTCTGAACTTGCTTCTGCAA+AGG 0.515774 1_1:+65768289 Msa0036920:CDS
CAGTTCTATGATAAACGTCC+TGG 0.515832 1_1:+65769230 Msa0036920:CDS
TCAAAGATTGAGCAGAAAGC+TGG 0.517124 1_1:+65762975 Msa0036920:CDS
GAAGTCCGTGTGAGAGGCTG+AGG 0.517924 1_1:+65770715 Msa0036920:three_prime_UTR
AACTTAGATTTAGATGGTGA+AGG 0.518157 1_1:+65769800 Msa0036920:CDS
AAACACGATTCTGCATGACT+TGG 0.518199 1_1:-65763608 None:intergenic
TGTTGATTGCATGTACTTGA+AGG 0.520047 1_1:+65771457 Msa0036920:three_prime_UTR
TTTGGGACTCCACAATGGCT+TGG 0.520154 1_1:+65766430 Msa0036920:CDS
TTGGCTTGAAGGGTTGCCAC+TGG 0.520642 1_1:+65762899 Msa0036920:CDS
AATCTGACTGATTCAGATGT+TGG 0.520844 1_1:+65767358 Msa0036920:CDS
CGCGGGCCGTGTTTACTACA+AGG 0.522312 1_1:+65763174 Msa0036920:CDS
GTCAACATCTACACCAAATG+AGG 0.522577 1_1:+65763658 Msa0036920:CDS
TTCTTACCGCACCCTTCATG+TGG 0.522892 1_1:-65770960 None:intergenic
TCTGGGGATAGTAGTAATGA+TGG 0.523983 1_1:+65763146 Msa0036920:CDS
TTGGTTTGCCTGGCATGTAG+AGG 0.524331 1_1:+65763871 Msa0036920:CDS
TCTAGGTTAGTACAGAATCC+TGG 0.524538 1_1:+65765483 Msa0036920:intron
ACACAAAATAATGAGTCTAA+AGG 0.525354 1_1:+65763575 Msa0036920:CDS
CAATGTAAGGTTGAGGGCTG+CGG 0.525486 1_1:+65771134 Msa0036920:three_prime_UTR
GGAGAAGCCTTATCAATGTA+AGG 0.525496 1_1:+65771121 Msa0036920:three_prime_UTR
AACTCATACGGCAATTATCA+AGG 0.525770 1_1:-65770893 None:intergenic
GTAACACCAGGAATATCATC+TGG 0.527491 1_1:-65763815 None:intergenic
AAATCCCCAATTGGCTTGAA+GGG 0.528256 1_1:+65762889 Msa0036920:CDS
TTCAGAGAAGCCTATTTATG+TGG 0.528434 1_1:+65763403 Msa0036920:CDS
ACTGCTCTCGCTACTGTGGA+TGG 0.528809 1_1:+65769896 Msa0036920:CDS
CATAAGCAAGTTTGGCAAAG+TGG 0.530953 1_1:+65763263 Msa0036920:CDS
CATCAACTCTAGTAATGGGT+TGG 0.531454 1_1:-65770474 None:intergenic
TCAGGAGCATTGGTTTGTGT+GGG 0.532536 1_1:+65767415 Msa0036920:CDS
TTCTGGATTTCATTATGCAA+TGG 0.532881 1_1:-65769602 None:intergenic
GTCACAAGATGATGGGGAGC+TGG 0.534782 1_1:+65770585 Msa0036920:CDS
AATCTTCAAACAGACCTGAA+TGG 0.537072 1_1:-65768460 None:intergenic
ACTTAGATTTAGATGGTGAA+GGG 0.537172 1_1:+65769801 Msa0036920:CDS
TGTTTCTCCATTGGTTGTAG+AGG 0.537971 1_1:+65763361 Msa0036920:CDS
GGTGAATCAATGCGTATTTG+TGG 0.538426 1_1:-65770992 None:intergenic
CGATGAGATGAGTTTGTACA+TGG 0.539507 1_1:+65767333 Msa0036920:CDS
CGTAACCTTTGCCCACATGA+AGG 0.543525 1_1:+65770948 Msa0036920:three_prime_UTR
AACCCTAAATTGGGGATTTG+GGG 0.544001 1_1:-65762736 None:intergenic
GAAAATAAAGGCACATGCCA+GGG 0.545650 1_1:+65768986 Msa0036920:CDS
CAACTGTAACTCAGCCTTGG+TGG 0.546136 1_1:-65770919 None:intergenic
TTCATGATCCTCTACATGCC+AGG 0.546401 1_1:-65763879 None:intergenic
TGAAAGTCCAATTAATAACC+AGG 0.547043 1_1:+65769925 Msa0036920:CDS
GTAATGCTGAAATCCCCAAT+TGG 0.547243 1_1:+65762880 Msa0036920:CDS
GATTCTCCAAACGCCGAACC+AGG 0.548500 1_1:-65763443 None:intergenic
ATGCAGCAAGAACGACAAGT+TGG 0.550182 1_1:+65770148 Msa0036920:CDS
AACATACCAATGTATATCAT+GGG 0.550555 1_1:-65763842 None:intergenic
GAAGTTCCCAGATCAAATGC+TGG 0.553820 1_1:+65770628 Msa0036920:CDS
TACAAGTGGGGAATATGCAG+AGG 0.554205 1_1:+65770234 Msa0036920:CDS
CAAGTAAAGCAGTTGCTGAT+GGG 0.554412 1_1:-65766509 None:intergenic
GTTTGTAAAGAAACTGAAAT+GGG 0.554656 1_1:+65763539 Msa0036920:CDS
TGATTATAACGAGGTTCCAA+TGG 0.555648 1_1:+65769037 Msa0036920:CDS
CATGTCATTCAAGTGGTCAT+GGG 0.556513 1_1:+65771067 Msa0036920:three_prime_UTR
CCAGATGCAACAACTACCTC+AGG 0.557532 1_1:-65765283 None:intergenic
AGACGAGAACTGCGCACACC+AGG 0.558625 1_1:-65767052 None:intergenic
TTGAAGGCTTGGGCAATGGT+GGG 0.559074 1_1:-65763022 None:intergenic
TAGTAATGATGGAGTGTCGC+GGG 0.559804 1_1:+65763157 Msa0036920:CDS
AGAACTGAGAAGATTGCTAC+AGG 0.560360 1_1:+65770741 Msa0036920:three_prime_UTR
ACTTCACCCATGATATACAT+TGG 0.561234 1_1:+65763836 Msa0036920:CDS
ATTGCTACAGGCAAAAGTGT+AGG 0.561753 1_1:+65770753 Msa0036920:three_prime_UTR
AAACGAGAATATAACTAATG+AGG 0.562704 1_1:+65770306 Msa0036920:CDS
TTGTTTCTCTGTAGCAAGCA+CGG 0.563055 1_1:+65769433 Msa0036920:CDS
GGAACTCTCTACATCAATCC+AGG 0.565169 1_1:+65770498 Msa0036920:CDS
TAATTTCATTTGTTGTTAGG+GGG 0.565301 1_1:+65771533 Msa0036920:three_prime_UTR
AGCGTGTTCATGAGGATGAT+AGG 0.566776 1_1:+65771015 Msa0036920:three_prime_UTR
GTTATCACACTTGCTACCAA+TGG 0.567211 1_1:-65769780 None:intergenic
TTCTTGGAAAACGGGTTCTG+GGG 0.567841 1_1:+65763130 Msa0036920:CDS
AACATGGCCTCTACAACCAA+TGG 0.568033 1_1:-65763368 None:intergenic
ATATGCAAGGCACTGCTGGT+TGG 0.568262 1_1:+65763723 Msa0036920:CDS
TGAAGCTGCCTTCCAAAACA+TGG 0.568999 1_1:-65763384 None:intergenic
CAATTCAGGCCGCTTCAAAA+GGG 0.571732 1_1:-65763075 None:intergenic
AGTTGCTGATGGGAGAGCAT+AGG 0.571977 1_1:-65766499 None:intergenic
GAGGAAGTCATCCGCACAGA+GGG 0.574609 1_1:+65763980 Msa0036920:CDS
ATCGTAGTCATCGAAGGCAA+CGG 0.575286 1_1:+65763480 Msa0036920:CDS
GAGTTTGAATACTAGTGTCT+CGG 0.575658 1_1:+65769646 Msa0036920:CDS
ACTTGAGACTGCACTATGAA+GGG 0.575692 1_1:-65767551 None:intergenic
AGACTTCTAGCGTTATTAGA+GGG 0.576742 1_1:+65771390 Msa0036920:three_prime_UTR
CGAAGCTTCAGTTCCTCGCA+AGG 0.576977 1_1:+65770833 Msa0036920:three_prime_UTR
CCTTGGTGGTGAAACTCATA+CGG 0.579314 1_1:-65770905 None:intergenic
AAAGAGGAAAATGGAAGACA+CGG 0.580046 1_1:+65770659 Msa0036920:CDS
GTAAAAGGAACTTGTTTACA+TGG 0.580325 1_1:-65769191 None:intergenic
GTGAATCAATGCGTATTTGT+GGG 0.582573 1_1:-65770991 None:intergenic
AGGGGTTGTTCAGAAGTCAA+TGG 0.582930 1_1:+65763232 Msa0036920:CDS
TGACAACATTCAGAGAATGA+AGG 0.583561 1_1:+65769322 Msa0036920:CDS
AACCAAATTACTGAAGCCAT+TGG 0.584646 1_1:+65769764 Msa0036920:CDS
CTGTTGCCTTGTAGTAAACA+CGG 0.586506 1_1:-65763180 None:intergenic
GAGTATGCTAATGACGTGCC+TGG 0.587685 1_1:+65763425 Msa0036920:CDS
AGTATTCAAACTCATACTAG+TGG 0.588281 1_1:-65769636 None:intergenic
CCAAACTGCTCTCGCTACTG+TGG 0.588975 1_1:+65769892 Msa0036920:CDS
TTAATTTCATTTGTTGTTAG+GGG 0.590293 1_1:+65771532 Msa0036920:three_prime_UTR
GCAACCCTTCAAGCCAATTG+GGG 0.592425 1_1:-65762893 None:intergenic
CAATTGTGTGAATCTACAAG+TGG 0.592771 1_1:+65770220 Msa0036920:CDS
TTATAAGAAGTCCGTGTGAG+AGG 0.594372 1_1:+65770709 Msa0036920:exon
TTAGCTATGCCAAGCCATTG+TGG 0.594643 1_1:-65766439 None:intergenic
CTAACTTTGGGACTCCACAA+TGG 0.595022 1_1:+65766425 Msa0036920:CDS
GTAACCTTTGCCCACATGAA+GGG 0.595791 1_1:+65770949 Msa0036920:three_prime_UTR
GAGATGTTGCAGAGCAAAGG+TGG 0.596350 1_1:+65768416 Msa0036920:CDS
GATTCACCAGCGTGTTCATG+AGG 0.599558 1_1:+65771007 Msa0036920:three_prime_UTR
AAGTTCCCAGATCAAATGCT+GGG 0.601275 1_1:+65770629 Msa0036920:CDS
AAAATGCAGCATAGAGAACC+AGG 0.603432 1_1:+65769670 Msa0036920:CDS
ACCCATTACTAGAGTTGATG+AGG 0.603897 1_1:+65770477 Msa0036920:CDS
TCGGAAAATTCAGTATCAGT+TGG 0.606485 1_1:-65762936 None:intergenic
GAATACTATGATGAGGTGAA+AGG 0.607430 1_1:-65762685 None:intergenic
TAGAGGGTGCTGCAGCATGT+TGG 0.607703 1_1:+65771406 Msa0036920:three_prime_UTR
GGAATAACTTGCAGATTCCA+AGG 0.607933 1_1:-65763761 None:intergenic
ATGGCAAATTATAAGCACAT+TGG 0.609580 1_1:-65768441 None:intergenic
AATTGTGTGAATCTACAAGT+GGG 0.610866 1_1:+65770221 Msa0036920:CDS
AGGGGACAACAGCCAAAATG+AGG 0.612546 1_1:+65770773 Msa0036920:three_prime_UTR
GTTGTTCCATGTCATTCAAG+TGG 0.612717 1_1:+65771060 Msa0036920:three_prime_UTR
CCATGACCACTTGAATGACA+TGG 0.613149 1_1:-65771066 None:intergenic
ATCATGGGTGAAGTAACACC+AGG 0.617425 1_1:-65763827 None:intergenic
AAAGGCATAATTTCCAGGAA+CGG 0.617478 1_1:-65763951 None:intergenic
CTTGGCCTCAGCCTCTCACA+CGG 0.617508 1_1:-65770720 None:intergenic
ACTTCACAAACGTCTGCAGT+AGG 0.617757 1_1:-65770067 None:intergenic
GTGCCAAGAACACTATTACC+TGG 0.618321 1_1:+65767034 Msa0036920:CDS
GGCTAGGACAGAGCATCTAA+GGG 0.618405 1_1:+65771088 Msa0036920:three_prime_UTR
GAAGATTGGACATCTAAACT+AGG 0.618611 1_1:+65769128 Msa0036920:CDS
CTTTGCCCACATGAAGGGTG+CGG 0.619226 1_1:+65770954 Msa0036920:three_prime_UTR
CTAAACTAGGTCTTAATCTG+CGG 0.620144 1_1:+65769141 Msa0036920:CDS
TGATTTGTCACAAGATGATG+GGG 0.620226 1_1:+65770579 Msa0036920:CDS
GTATTCAAACTCATACTAGT+GGG 0.621009 1_1:-65769635 None:intergenic
ACACGATTCTGCATGACTTG+GGG 0.622776 1_1:-65763606 None:intergenic
TCATCTCATCGAGCAGACAA+TGG 0.623638 1_1:-65767321 None:intergenic
GATGACTTCCTCAAAAGCAA+AGG 0.625253 1_1:-65763969 None:intergenic
ACACTGGCTCATCAAAGACT+TGG 0.625855 1_1:+65763924 Msa0036920:CDS
GAATCAGTTTGGAAGTGACA+TGG 0.626890 1_1:-65767394 None:intergenic
GGGTGCTGCAGCATGTTGGT+TGG 0.628318 1_1:+65771410 Msa0036920:three_prime_UTR
TCATTGAAAGAGACAACTGA+GGG 0.629188 1_1:+65769974 Msa0036920:CDS
TGAGATATAAGCAATTGGGT+CGG 0.629574 1_1:-65762955 None:intergenic
GTGGAGATGTTGCAGAGCAA+AGG 0.630466 1_1:+65768413 Msa0036920:CDS
CCGTATGAGTTTCACCACCA+AGG 0.634300 1_1:+65770905 Msa0036920:three_prime_UTR
TGCTCCAAGCAGAAAATCCG+TGG 0.637437 1_1:-65768377 None:intergenic
GGTCGAAATTCAGGTGCCAG+TGG 0.638321 1_1:-65762915 None:intergenic
ATAGGCCCTTTAAATGCACA+TGG 0.638974 1_1:+65771033 Msa0036920:three_prime_UTR
TCACCTTGAAATAAAAGACA+TGG 0.639403 1_1:-65766536 None:intergenic
TCTTACCGCACCCTTCATGT+GGG 0.641304 1_1:-65770959 None:intergenic
ATCCAGTAGCTAAAAGGACA+CGG 0.642114 1_1:+65770802 Msa0036920:three_prime_UTR
ACTACAAGGCAACAGGAAGT+GGG 0.648096 1_1:+65763188 Msa0036920:CDS
ATCCGCACAGAGGGTTATGG+TGG 0.648464 1_1:+65763989 Msa0036920:CDS
GATGCTGACAATGATATGCA+AGG 0.650720 1_1:+65763710 Msa0036920:CDS
GTCTTTGACTGAAATGGACG+AGG 0.652229 1_1:+65770006 Msa0036920:CDS
TTATCAAGGTCACACTTATG+CGG 0.652852 1_1:-65770879 None:intergenic
TGCTACAGGCAAAAGTGTAG+GGG 0.653624 1_1:+65770755 Msa0036920:three_prime_UTR
AAAGTCACAACAAATTCACC+AGG 0.656830 1_1:-65765501 None:intergenic
GATTCTGCATGACTTGGGGA+AGG 0.659374 1_1:-65763602 None:intergenic
ACAAGTGGGGAATATGCAGA+GGG 0.659964 1_1:+65770235 Msa0036920:CDS
TAAGCAACTAACCTGCAGCA+AGG 0.661037 1_1:-65765310 None:intergenic
GCATCTAAGGGTGCATACTG+GGG 0.667862 1_1:+65771100 Msa0036920:three_prime_UTR
AAATTGGGAATACTATGATG+AGG 0.671363 1_1:-65762692 None:intergenic
GGACAACAGCCAAAATGAGG+AGG 0.671631 1_1:+65770776 Msa0036920:three_prime_UTR
GTAGTAATGATGGAGTGTCG+CGG 0.672073 1_1:+65763156 Msa0036920:CDS
TGCCAATTTAAAGATAAACC+AGG 0.676523 1_1:-65769248 None:intergenic
AGTGATTGTGCATTGTCACG+TGG 0.680404 1_1:+65769557 Msa0036920:CDS
GTTAGTGAGCCTGAAGCACG+AGG 0.681206 1_1:-65763782 None:intergenic
ATTGTGTGAATCTACAAGTG+GGG 0.682641 1_1:+65770222 Msa0036920:CDS
GTCATTGAAAGAGACAACTG+AGG 0.685031 1_1:+65769973 Msa0036920:CDS
TCGGCGTTTGGAGAATCACA+GGG 0.686552 1_1:+65763449 Msa0036920:CDS
TACTTCTGGAACCTATATGG+CGG 0.687140 1_1:+65767258 Msa0036920:CDS
TATCATCCTCATGAACACGC+TGG 0.693927 1_1:-65771013 None:intergenic
TGTAAAGAAACTGAAATGGG+TGG 0.710565 1_1:+65763542 Msa0036920:CDS
CACCACCATAACCCTCTGTG+CGG 0.713502 1_1:-65763991 None:intergenic
AAAGATGAGAGTAACAAACA+AGG 0.723432 1_1:+65771561 Msa0036920:three_prime_UTR
GGAGCCAACAGAGTTCAGAG+AGG 0.726712 1_1:-65767530 None:intergenic
TGAGGAAGTCATCCGCACAG+AGG 0.728883 1_1:+65763979 Msa0036920:CDS
TATCATGTAGGATTCAGCCA+CGG 0.736120 1_1:+65765534 Msa0036920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTT+TGG + chr1_1:65767595-65767614 Msa0036920:intron 0.0%
!!! AATTTTTTCTAAACATATAT+TGG - chr1_1:65764078-65764097 None:intergenic 10.0%
!! TTACATTATATTAATAAAGA+AGG - chr1_1:65768572-65768591 None:intergenic 10.0%
!!! GAAAAAACATATTTTTTTGA+AGG - chr1_1:65763041-65763060 None:intergenic 15.0%
!! AAAATGTCAAAAAAACTAAA+GGG + chr1_1:65763213-65763232 Msa0036920:CDS 15.0%
!! TCAAACAAATCATATTATTA+AGG - chr1_1:65764525-65764544 None:intergenic 15.0%
!! TACTAAAAATTACAAAAGTA+TGG + chr1_1:65764724-65764743 Msa0036920:intron 15.0%
!!! TTTTTCTTCTTTTTTAGAAA+AGG - chr1_1:65765104-65765123 None:intergenic 15.0%
!! AACACTAAAAACAATATATT+TGG + chr1_1:65765989-65766008 Msa0036920:intron 15.0%
!! ACACTAAAAACAATATATTT+GGG + chr1_1:65765990-65766009 Msa0036920:intron 15.0%
!! ATATAACATTAGTATTCTAT+TGG - chr1_1:65767807-65767826 None:intergenic 15.0%
!! ATAGAATACTAATGTTATAT+AGG + chr1_1:65767807-65767826 Msa0036920:intron 15.0%
!! ATTGTATATTCATGATATTA+TGG + chr1_1:65768160-65768179 Msa0036920:intron 15.0%
!!! ACATTTGTTAAAAAGTATAT+TGG + chr1_1:65768218-65768237 Msa0036920:intron 15.0%
!! ATAAAAAATCCAATGTTAAA+AGG + chr1_1:65770856-65770875 Msa0036920:three_prime_UTR 15.0%
!!! TTGAAAATATTCATTCATTT+TGG + chr1_1:65771229-65771248 Msa0036920:three_prime_UTR 15.0%
!!! TATTAATTTCATTTGTTGTT+AGG + chr1_1:65771530-65771549 Msa0036920:three_prime_UTR 15.0%
!!! ATTAATTTCATTTGTTGTTA+GGG + chr1_1:65771531-65771550 Msa0036920:three_prime_UTR 15.0%
!!! GTACTTTAATTTTTTTTTTG+TGG + chr1_1:65771671-65771690 Msa0036920:three_prime_UTR 15.0%
!!! TTTGATTCTTTTTCATGATA+TGG + chr1_1:65762857-65762876 Msa0036920:exon 20.0%
!!! TTGATTCTTTTTCATGATAT+GGG + chr1_1:65762858-65762877 Msa0036920:exon 20.0%
!! CAAAATGTCAAAAAAACTAA+AGG + chr1_1:65763212-65763231 Msa0036920:CDS 20.0%
!! AAATGTCAAAAAAACTAAAG+GGG + chr1_1:65763214-65763233 Msa0036920:CDS 20.0%
!!! AGATCAAGTCTTTTAATATT+TGG - chr1_1:65764140-65764159 None:intergenic 20.0%
!! AATAGAACAAATATCAAAAC+AGG - chr1_1:65764557-65764576 None:intergenic 20.0%
!! TAACACAAAAGTAAATTAGA+AGG + chr1_1:65764594-65764613 Msa0036920:intron 20.0%
!! ATAGTTTCTTAAAGAAAACA+TGG + chr1_1:65764671-65764690 Msa0036920:intron 20.0%
!! TGTAGAAAATATGAAATAGA+AGG + chr1_1:65764697-65764716 Msa0036920:intron 20.0%
!!! AAAAATTACAAAAGTATGGA+AGG + chr1_1:65764728-65764747 Msa0036920:intron 20.0%
!!! AAGGTTTTATTTTTAACCTT+TGG - chr1_1:65765085-65765104 None:intergenic 20.0%
!! GAAAAACAAATAAGATGAAT+AGG - chr1_1:65765148-65765167 None:intergenic 20.0%
!! ACAAATACAGTGTAATAAAA+TGG - chr1_1:65765191-65765210 None:intergenic 20.0%
!!! TTTTACACTTTTACTAGAAA+AGG + chr1_1:65766260-65766279 Msa0036920:intron 20.0%
!! TAATTCTTATGTGTACAATA+TGG + chr1_1:65766371-65766390 Msa0036920:intron 20.0%
!!! ATGGATTATGTTTAATTACA+TGG + chr1_1:65766687-65766706 Msa0036920:intron 20.0%
!! ATTATGTTTAATTACATGGA+TGG + chr1_1:65766691-65766710 Msa0036920:intron 20.0%
!! TTATGTTTAATTACATGGAT+GGG + chr1_1:65766692-65766711 Msa0036920:intron 20.0%
!!! CTTTTAAGCTTAATTAGTTA+TGG + chr1_1:65766766-65766785 Msa0036920:intron 20.0%
!! ATTAAACATTAATGTAAGTC+AGG + chr1_1:65766852-65766871 Msa0036920:intron 20.0%
!!! AATGCTGTTTTTATATTCAA+AGG + chr1_1:65766965-65766984 Msa0036920:intron 20.0%
!! ACTCCTACAAAAATATTATT+TGG + chr1_1:65767981-65768000 Msa0036920:intron 20.0%
!!! ACACCAAATAATATTTTTGT+AGG - chr1_1:65767987-65768006 None:intergenic 20.0%
!! AATCAGAAATTGTACATATT+TGG - chr1_1:65768129-65768148 None:intergenic 20.0%
!!! TGTTTTTGTTTTGAAAATCT+TGG - chr1_1:65768201-65768220 None:intergenic 20.0%
!! ATTATCATTCTGTTAAAGTT+GGG + chr1_1:65768497-65768516 Msa0036920:intron 20.0%
!! AATACTAGATTCATGATATA+TGG - chr1_1:65768695-65768714 None:intergenic 20.0%
!! AATCTAGTATTGTATGAATA+AGG + chr1_1:65768704-65768723 Msa0036920:intron 20.0%
!! ATTTCTTTATCATCATTTAG+AGG - chr1_1:65770034-65770053 None:intergenic 20.0%
!!! TTAATTTCATTTGTTGTTAG+GGG + chr1_1:65771532-65771551 Msa0036920:three_prime_UTR 20.0%
!! ATTCTGAAAAACCCTAAATT+GGG - chr1_1:65762748-65762767 None:intergenic 25.0%
!! AATTCTGAAAAACCCTAAAT+TGG - chr1_1:65762749-65762768 None:intergenic 25.0%
!!! TCTTTGAGATATAAGCAATT+GGG - chr1_1:65762962-65762981 None:intergenic 25.0%
!!! ATCTTTGAGATATAAGCAAT+TGG - chr1_1:65762963-65762982 None:intergenic 25.0%
!!! ACATATTTTTTTGAAGGCTT+GGG - chr1_1:65763035-65763054 None:intergenic 25.0%
!!! AACATATTTTTTTGAAGGCT+TGG - chr1_1:65763036-65763055 None:intergenic 25.0%
! TGTTTGTAAAGAAACTGAAA+TGG + chr1_1:65763538-65763557 Msa0036920:CDS 25.0%
! GTTTGTAAAGAAACTGAAAT+GGG + chr1_1:65763539-65763558 Msa0036920:CDS 25.0%
! ACACAAAATAATGAGTCTAA+AGG + chr1_1:65763575-65763594 Msa0036920:CDS 25.0%
! AACATACCAATGTATATCAT+GGG - chr1_1:65763845-65763864 None:intergenic 25.0%
! TAGAAAAAATTTCGCATCTA+TGG + chr1_1:65764087-65764106 Msa0036920:intron 25.0%
! AAAGACTTGATCTGTATATT+TGG + chr1_1:65764147-65764166 Msa0036920:intron 25.0%
! TTCTTATATTTCCTAGCAAA+TGG + chr1_1:65764211-65764230 Msa0036920:intron 25.0%
! CATAATCTTATTCAAAGTGA+TGG - chr1_1:65764277-65764296 None:intergenic 25.0%
!! GAATAAGATTATGTTTTCCA+AGG + chr1_1:65764284-65764303 Msa0036920:intron 25.0%
!!! CTCATGTGATTTTTGAAAAT+TGG - chr1_1:65764493-65764512 None:intergenic 25.0%
! GAAATAAACATTCCAATTGT+TGG - chr1_1:65764775-65764794 None:intergenic 25.0%
!!! TGTATTACTAGTTTTTTGTG+CGG - chr1_1:65764799-65764818 None:intergenic 25.0%
! AATTAAATAGGCAGTATCAA+TGG - chr1_1:65765030-65765049 None:intergenic 25.0%
!!! GTTTTATTTTTAACCTTTGG+AGG - chr1_1:65765082-65765101 None:intergenic 25.0%
! ACTAATTCAACATAGAGAAT+AGG - chr1_1:65765438-65765457 None:intergenic 25.0%
!! TAGGTTTTTACTCTGTAATA+TGG + chr1_1:65765611-65765630 Msa0036920:intron 25.0%
! AATATATTTGGGAGAAAGTT+CGG + chr1_1:65766001-65766020 Msa0036920:intron 25.0%
! GATGATTATAGAAACTCAAA+TGG + chr1_1:65766041-65766060 Msa0036920:intron 25.0%
! TCAATTAAAATGTTCTAGTG+AGG + chr1_1:65766194-65766213 Msa0036920:intron 25.0%
! TTATATTGAAGATTGAAGAG+AGG - chr1_1:65766354-65766373 None:intergenic 25.0%
! TGTACAATATGGTGAAATAA+AGG + chr1_1:65766382-65766401 Msa0036920:intron 25.0%
!!! TGAAATAAAGGTTTTAACTG+TGG + chr1_1:65766394-65766413 Msa0036920:intron 25.0%
!!! GAAATAAAGGTTTTAACTGT+GGG + chr1_1:65766395-65766414 Msa0036920:intron 25.0%
!!! AAATAAAGGTTTTAACTGTG+GGG + chr1_1:65766396-65766415 Msa0036920:intron 25.0%
! ATGTTATATTCTCATTCCTA+TGG + chr1_1:65766595-65766614 Msa0036920:intron 25.0%
! AATAGTTGAAAGGAAAATAG+AGG - chr1_1:65766635-65766654 None:intergenic 25.0%
!! CTATTTTCCTTTCAACTATT+TGG + chr1_1:65766635-65766654 Msa0036920:intron 25.0%
! CATATAAAGTAGAGTTGTTT+GGG + chr1_1:65766814-65766833 Msa0036920:intron 25.0%
! ATATAAAGTAGAGTTGTTTG+GGG + chr1_1:65766815-65766834 Msa0036920:intron 25.0%
!!! CTACTAAAGAAGTTGTTTTA+TGG + chr1_1:65767179-65767198 Msa0036920:CDS 25.0%
! GGTTGTATTAATGTCATAAA+TGG - chr1_1:65767460-65767479 None:intergenic 25.0%
! AACATTAGTATTCTATTGGT+TGG - chr1_1:65767803-65767822 None:intergenic 25.0%
! AGTATATTTGAATTGTGAAG+TGG + chr1_1:65767901-65767920 Msa0036920:intron 25.0%
! GCTATAATGATATATTGCAT+TGG + chr1_1:65767923-65767942 Msa0036920:intron 25.0%
! TTTCATTCAATCATGAGATA+AGG - chr1_1:65768086-65768105 None:intergenic 25.0%
! CATGATTGAATGAAAATGAA+TGG + chr1_1:65768091-65768110 Msa0036920:intron 25.0%
! CATTATCATTCTGTTAAAGT+TGG + chr1_1:65768496-65768515 Msa0036920:intron 25.0%
! TCTTTATTGAATCTTGCAAT+AGG + chr1_1:65768636-65768655 Msa0036920:intron 25.0%
! AAAGTAGTTTAGATGATCTT+AGG + chr1_1:65768661-65768680 Msa0036920:intron 25.0%
! AAAACTTAGACAGAATAATC+TGG - chr1_1:65768784-65768803 None:intergenic 25.0%
! ATCAACAAATGACATATAGA+TGG - chr1_1:65768868-65768887 None:intergenic 25.0%
! TGTCAGAACAATAAATATTC+TGG + chr1_1:65769695-65769714 Msa0036920:CDS 25.0%
! TGTGATAACTTAGATTTAGA+TGG + chr1_1:65769794-65769813 Msa0036920:CDS 25.0%
!! CATTAGTTATATTCTCGTTT+TGG - chr1_1:65770306-65770325 None:intergenic 25.0%
! AAACGAGAATATAACTAATG+AGG + chr1_1:65770306-65770325 Msa0036920:CDS 25.0%
! AGTATAACCATATCAGAAAT+AGG + chr1_1:65770367-65770386 Msa0036920:CDS 25.0%
! TTCGAATACTGAAAAGAAAA+TGG + chr1_1:65770447-65770466 Msa0036920:CDS 25.0%
! TAAAGTCATAGCAATCAAAT+TGG - chr1_1:65770692-65770711 None:intergenic 25.0%
!!! ATGAATGAATATTTTCAAGC+AGG - chr1_1:65771227-65771246 None:intergenic 25.0%
!!! TAGTTCTTTTAAGTCTTCAT+TGG + chr1_1:65771480-65771499 Msa0036920:three_prime_UTR 25.0%
!!! TAATTTCATTTGTTGTTAGG+GGG + chr1_1:65771533-65771552 Msa0036920:three_prime_UTR 25.0%
AAATTGGGAATACTATGATG+AGG - chr1_1:65762695-65762714 None:intergenic 30.0%
AGTATTCCCAATTTCTTCAA+AGG + chr1_1:65762701-65762720 Msa0036920:five_prime_UTR 30.0%
! TGCTTACCTTTGAAGAAATT+GGG - chr1_1:65762710-65762729 None:intergenic 30.0%
! TTGCTTACCTTTGAAGAAAT+TGG - chr1_1:65762711-65762730 None:intergenic 30.0%
! TTCTGAAAAACCCTAAATTG+GGG - chr1_1:65762747-65762766 None:intergenic 30.0%
TTAGCATACTCCACATAAAT+AGG - chr1_1:65763416-65763435 None:intergenic 30.0%
! AATTTTATCGTAGTCATCGA+AGG + chr1_1:65763474-65763493 Msa0036920:CDS 30.0%
AAAGGACTGATTATAAGAGT+AGG + chr1_1:65763504-65763523 Msa0036920:CDS 30.0%
AAGGACTGATTATAAGAGTA+GGG + chr1_1:65763505-65763524 Msa0036920:CDS 30.0%
CAACATACCAATGTATATCA+TGG - chr1_1:65763846-65763865 None:intergenic 30.0%
! ACATTGGTATGTTGTTTAGT+TGG + chr1_1:65763852-65763871 Msa0036920:CDS 30.0%
!! AAATTATGCCTTTGCTTTTG+AGG + chr1_1:65763961-65763980 Msa0036920:CDS 30.0%
!! ATTCAAAGTGATGGATATTG+AGG - chr1_1:65764268-65764287 None:intergenic 30.0%
TCCAAGGATGATAAAGTAAT+TGG + chr1_1:65764300-65764319 Msa0036920:intron 30.0%
TAAGAATGTGTGAATTCTCT+TGG + chr1_1:65764391-65764410 Msa0036920:intron 30.0%
TATTCTTAGAAATCGTGGTT+GGG - chr1_1:65764920-65764939 None:intergenic 30.0%
AATTTGTCAAACACAGATGA+AGG + chr1_1:65764976-65764995 Msa0036920:intron 30.0%
TATTTAATTCCCGTACTGTA+CGG + chr1_1:65765041-65765060 Msa0036920:intron 30.0%
TTATGCTGTTATGTCATGAA+TGG + chr1_1:65765342-65765361 Msa0036920:intron 30.0%
! TATTGTTTGAGATCCATAGT+TGG + chr1_1:65765393-65765412 Msa0036920:intron 30.0%
ATTAGTAATAATATCCGTGC+CGG + chr1_1:65765452-65765471 Msa0036920:intron 30.0%
ACAGTATTCTGCAAAATATC+AGG - chr1_1:65765586-65765605 None:intergenic 30.0%
!!! AATGACACGACATTTTTTCA+AGG + chr1_1:65765806-65765825 Msa0036920:intron 30.0%
!!! ATGACACGACATTTTTTCAA+GGG + chr1_1:65765807-65765826 Msa0036920:intron 30.0%
! CAAGGGTGAAATATGTTTTT+AGG + chr1_1:65765824-65765843 Msa0036920:intron 30.0%
GCATAAATGAAAATGCTGAT+TGG + chr1_1:65765950-65765969 Msa0036920:intron 30.0%
ATATATTTGGGAGAAAGTTC+GGG + chr1_1:65766002-65766021 Msa0036920:intron 30.0%
! TAGAAACTCAAATGGTGTTT+TGG + chr1_1:65766049-65766068 Msa0036920:intron 30.0%
! ATTTTCCCTTTGTATCTTAG+AGG + chr1_1:65766288-65766307 Msa0036920:intron 30.0%
!! TGACCATGTCTTTTATTTCA+AGG + chr1_1:65766533-65766552 Msa0036920:CDS 30.0%
TCACCTTGAAATAAAAGACA+TGG - chr1_1:65766539-65766558 None:intergenic 30.0%
AGATTGTATACAAGTTGTGT+TGG - chr1_1:65766571-65766590 None:intergenic 30.0%
CACAACTTGTATACAATCTA+TGG + chr1_1:65766572-65766591 Msa0036920:intron 30.0%
TCATTCCTATGGAATATGAA+TGG + chr1_1:65766606-65766625 Msa0036920:intron 30.0%
ACTCTACTTTATATGCAGTA+AGG - chr1_1:65766809-65766828 None:intergenic 30.0%
GCATATAAAGTAGAGTTGTT+TGG + chr1_1:65766813-65766832 Msa0036920:intron 30.0%
AAGAGAGATTCTAGTAAAAC+AGG + chr1_1:65767096-65767115 Msa0036920:CDS 30.0%
ACCAACTGAGAAATTGATAA+TGG + chr1_1:65767477-65767496 Msa0036920:CDS 30.0%
TCCATTATCAATTTCTCAGT+TGG - chr1_1:65767481-65767500 None:intergenic 30.0%
TCTTCAACTAGATGATTATC+AGG - chr1_1:65767508-65767527 None:intergenic 30.0%
ATTGTACATTTCTTAGTTCC+TGG + chr1_1:65767775-65767794 Msa0036920:intron 30.0%
! GTAGGAGTAATTTGACATTT+TGG - chr1_1:65767969-65767988 None:intergenic 30.0%
TGATATTATGGAAGCTGATA+TGG + chr1_1:65768172-65768191 Msa0036920:intron 30.0%
! AGTTATGTTATCTGTTTTCC+AGG + chr1_1:65768254-65768273 Msa0036920:intron 30.0%
! GTTATGTTATCTGTTTTCCA+GGG + chr1_1:65768255-65768274 Msa0036920:intron 30.0%
! TTATGTTATCTGTTTTCCAG+GGG + chr1_1:65768256-65768275 Msa0036920:intron 30.0%
ATGGCAAATTATAAGCACAT+TGG - chr1_1:65768444-65768463 None:intergenic 30.0%
! AACAGAATGATAATGCAAAC+AGG - chr1_1:65768491-65768510 None:intergenic 30.0%
TTGGTGAAATTATAGGGTTT+AGG - chr1_1:65768827-65768846 None:intergenic 30.0%
TAAACCCTATAATTTCACCA+AGG + chr1_1:65768826-65768845 Msa0036920:intron 30.0%
TAGACCTTGGTGAAATTATA+GGG - chr1_1:65768833-65768852 None:intergenic 30.0%
TTAGACCTTGGTGAAATTAT+AGG - chr1_1:65768834-65768853 None:intergenic 30.0%
TTCACCAAGGTCTAATAAAA+AGG + chr1_1:65768839-65768858 Msa0036920:intron 30.0%
! GATTCCTTTTTATTAGACCT+TGG - chr1_1:65768846-65768865 None:intergenic 30.0%
!!! TAATGCATGCTGTGTTTTTT+TGG + chr1_1:65768892-65768911 Msa0036920:intron 30.0%
AAAAAAAAGCAGAATCGTGA+AGG - chr1_1:65768955-65768974 None:intergenic 30.0%
TGTAGACTATCCGAAAATAA+AGG + chr1_1:65768974-65768993 Msa0036920:intron 30.0%
!! AAGTGCTTTTGATTATAACG+AGG + chr1_1:65769028-65769047 Msa0036920:CDS 30.0%
! TATCAAAGCCAAATTTTCTG+GGG - chr1_1:65769072-65769091 None:intergenic 30.0%
! CTATCAAAGCCAAATTTTCT+GGG - chr1_1:65769073-65769092 None:intergenic 30.0%
! TCTATCAAAGCCAAATTTTC+TGG - chr1_1:65769074-65769093 None:intergenic 30.0%
!! AAATTTGGCTTTGATAGATC+TGG + chr1_1:65769076-65769095 Msa0036920:CDS 30.0%
AACTTGATGAATGTGAAGAT+TGG + chr1_1:65769114-65769133 Msa0036920:CDS 30.0%
! GTAAAAGGAACTTGTTTACA+TGG - chr1_1:65769194-65769213 None:intergenic 30.0%
GTCCTGGTTTATCTTTAAAT+TGG + chr1_1:65769246-65769265 Msa0036920:CDS 30.0%
TGCCAATTTAAAGATAAACC+AGG - chr1_1:65769251-65769270 None:intergenic 30.0%
AGAAACTGCTTCAATATTCA+AGG + chr1_1:65769387-65769406 Msa0036920:CDS 30.0%
TTCTGGATTTCATTATGCAA+TGG - chr1_1:65769605-65769624 None:intergenic 30.0%
GTATTCAAACTCATACTAGT+GGG - chr1_1:65769638-65769657 None:intergenic 30.0%
AGTATTCAAACTCATACTAG+TGG - chr1_1:65769639-65769658 None:intergenic 30.0%
ATTTATTGTTCTGACAATCC+TGG - chr1_1:65769691-65769710 None:intergenic 30.0%
AACTTAGATTTAGATGGTGA+AGG + chr1_1:65769800-65769819 Msa0036920:CDS 30.0%
ACTTAGATTTAGATGGTGAA+GGG + chr1_1:65769801-65769820 Msa0036920:CDS 30.0%
! TGTTTTATCTACTGCTTCAT+TGG + chr1_1:65769865-65769884 Msa0036920:CDS 30.0%
TGAAAGTCCAATTAATAACC+AGG + chr1_1:65769925-65769944 Msa0036920:CDS 30.0%
AAGTAAGTCTTTGACTGAAA+TGG + chr1_1:65770000-65770019 Msa0036920:CDS 30.0%
CTTCCATAATACAGTAAACT+TGG + chr1_1:65770117-65770136 Msa0036920:CDS 30.0%
CATCCAAGTTTACTGTATTA+TGG - chr1_1:65770123-65770142 None:intergenic 30.0%
!! TTGTTTTGTGGAAATATGAG+TGG - chr1_1:65770203-65770222 None:intergenic 30.0%
!! AGATTCACACAATTGTTTTG+TGG - chr1_1:65770215-65770234 None:intergenic 30.0%
AATTGTGTGAATCTACAAGT+GGG + chr1_1:65770221-65770240 Msa0036920:CDS 30.0%
GTATCTAGTTATGTTGCAAA+AGG + chr1_1:65770334-65770353 Msa0036920:CDS 30.0%
!! AGAACATCCTATTTCTGATA+TGG - chr1_1:65770377-65770396 None:intergenic 30.0%
TGAATACATGAGTCTTCTTT+GGG - chr1_1:65770421-65770440 None:intergenic 30.0%
TTGAATACATGAGTCTTCTT+TGG - chr1_1:65770422-65770441 None:intergenic 30.0%
!! TTGATTTGTCACAAGATGAT+GGG + chr1_1:65770578-65770597 Msa0036920:CDS 30.0%
GGAAGAAAAAAAGAGGAAAA+TGG + chr1_1:65770650-65770669 Msa0036920:CDS 30.0%
ATGACATATGCACATGTTAT+AGG - chr1_1:65771264-65771283 None:intergenic 30.0%
TGTGCATATGTCATATAGTA+AGG + chr1_1:65771270-65771289 Msa0036920:three_prime_UTR 30.0%
TAACCACTTCCAAATGAATT+GGG - chr1_1:65771371-65771390 None:intergenic 30.0%
AAAGATGAGAGTAACAAACA+AGG + chr1_1:65771561-65771580 Msa0036920:three_prime_UTR 30.0%
CAAAGTAGAGTGCGAAATTT+GGG - chr1_1:65762611-65762630 None:intergenic 35.0%
GGTTAAGCAAAATAGCGAAA+TGG - chr1_1:65762667-65762686 None:intergenic 35.0%
GAATACTATGATGAGGTGAA+AGG - chr1_1:65762688-65762707 None:intergenic 35.0%
AAACCCTAAATTGGGGATTT+GGG - chr1_1:65762740-65762759 None:intergenic 35.0%
AAAACCCTAAATTGGGGATT+TGG - chr1_1:65762741-65762760 None:intergenic 35.0%
TCGGAAAATTCAGTATCAGT+TGG - chr1_1:65762939-65762958 None:intergenic 35.0%
TGAGATATAAGCAATTGGGT+CGG - chr1_1:65762958-65762977 None:intergenic 35.0%
AGCAGAAAGCTGGTAAATTT+GGG + chr1_1:65762985-65763004 Msa0036920:CDS 35.0%
!! TGAATAAGTCCCTTTTGAAG+CGG + chr1_1:65763066-65763085 Msa0036920:CDS 35.0%
TGCTGGTAATTCTTGGAAAA+CGG + chr1_1:65763121-65763140 Msa0036920:CDS 35.0%
TTCAGAGAAGCCTATTTATG+TGG + chr1_1:65763403-65763422 Msa0036920:CDS 35.0%
TGTAAAGAAACTGAAATGGG+TGG + chr1_1:65763542-65763561 Msa0036920:CDS 35.0%
! TCTGAAATCATCTCCTTAGA+AGG - chr1_1:65763692-65763711 None:intergenic 35.0%
ACTTCACCCATGATATACAT+TGG + chr1_1:65763836-65763855 Msa0036920:CDS 35.0%
! AGCTTGAATTTTCTTCACAC+TGG + chr1_1:65763908-65763927 Msa0036920:CDS 35.0%
! AAAGGCATAATTTCCAGGAA+CGG - chr1_1:65763954-65763973 None:intergenic 35.0%
! AAAGCAAAGGCATAATTTCC+AGG - chr1_1:65763959-65763978 None:intergenic 35.0%
GCCAATTACTTTATCATCCT+TGG - chr1_1:65764304-65764323 None:intergenic 35.0%
TTGGCATAGACTACTTAAGT+TGG - chr1_1:65764326-65764345 None:intergenic 35.0%
TATGCCAATCTATATCGATG+AGG + chr1_1:65764338-65764357 Msa0036920:intron 35.0%
ATTGCCTCATCGATATAGAT+TGG - chr1_1:65764345-65764364 None:intergenic 35.0%
TTCAGAAAGTAGCCAACAAT+TGG + chr1_1:65764760-65764779 Msa0036920:intron 35.0%
TACATGTTAGAGTCTCACAT+CGG + chr1_1:65764815-65764834 Msa0036920:intron 35.0%
CCACTTATAAACACATTGTC+GGG - chr1_1:65764852-65764871 None:intergenic 35.0%
CCCACTTATAAACACATTGT+CGG - chr1_1:65764853-65764872 None:intergenic 35.0%
CCGACAATGTGTTTATAAGT+GGG + chr1_1:65764850-65764869 Msa0036920:intron 35.0%
CGACAATGTGTTTATAAGTG+GGG + chr1_1:65764851-65764870 Msa0036920:intron 35.0%
GACAATGTGTTTATAAGTGG+GGG + chr1_1:65764852-65764871 Msa0036920:intron 35.0%
GTATTCTTAGAAATCGTGGT+TGG - chr1_1:65764921-65764940 None:intergenic 35.0%
ACAGGTATTCTTAGAAATCG+TGG - chr1_1:65764925-65764944 None:intergenic 35.0%
GTACAGTACGGGAATTAAAT+AGG - chr1_1:65765042-65765061 None:intergenic 35.0%
ATTTAATTCCCGTACTGTAC+GGG + chr1_1:65765042-65765061 Msa0036920:intron 35.0%
!! TTTTTAACCTTTGGAGGACT+TGG - chr1_1:65765076-65765095 None:intergenic 35.0%
! AACTACTCTTTTATCACCTG+AGG + chr1_1:65765267-65765286 Msa0036920:CDS 35.0%
AGCAGAAAAAACACCAACTA+TGG - chr1_1:65765409-65765428 None:intergenic 35.0%
ACTAACCTAGAAAGAAACAC+CGG - chr1_1:65765474-65765493 None:intergenic 35.0%
AAAGTCACAACAAATTCACC+AGG - chr1_1:65765504-65765523 None:intergenic 35.0%
TTTCCAAGAGCTTATCATGT+AGG + chr1_1:65765522-65765541 Msa0036920:CDS 35.0%
AATCCTACATGATAAGCTCT+TGG - chr1_1:65765528-65765547 None:intergenic 35.0%
AAACTTCAAAGCAATTACCG+TGG - chr1_1:65765554-65765573 None:intergenic 35.0%
TTGCAGAATACTGTTGTTGT+AGG + chr1_1:65765592-65765611 Msa0036920:intron 35.0%
! GTAATATGGAGTGATAATGC+TGG + chr1_1:65765625-65765644 Msa0036920:intron 35.0%
ATTTAGACCTGTTTGGCATA+TGG + chr1_1:65765667-65765686 Msa0036920:intron 35.0%
!!! TGCTTATTTTTTGCTCCTGT+TGG - chr1_1:65765928-65765947 None:intergenic 35.0%
TAGTGAGAAAGTGAATGAAG+TGG + chr1_1:65766163-65766182 Msa0036920:intron 35.0%
! GGAAAAGAACTTGCTCTAAA+TGG + chr1_1:65766237-65766256 Msa0036920:intron 35.0%
TTGAGTTATACTGTCTTGTG+AGG + chr1_1:65766324-65766343 Msa0036920:intron 35.0%
ACTAGCACCAAATAGTTGAA+AGG - chr1_1:65766645-65766664 None:intergenic 35.0%
TGCAGTAAGGATATTAGCAA+AGG - chr1_1:65766796-65766815 None:intergenic 35.0%
ATTAATGTAAGTCAGGTCTG+AGG + chr1_1:65766859-65766878 Msa0036920:intron 35.0%
TCTCTCTTTCTTCTTTCTGA+CGG - chr1_1:65767084-65767103 None:intergenic 35.0%
! AGCTTCTTTTCCAAGAAGAA+TGG - chr1_1:65767161-65767180 None:intergenic 35.0%
! GTTGATTTACTACCAGATTC+TGG + chr1_1:65767205-65767224 Msa0036920:CDS 35.0%
TAGAAGCTAAATCAGACAAC+TGG - chr1_1:65767240-65767259 None:intergenic 35.0%
! TCTGATTTAGCTTCTACTTC+TGG + chr1_1:65767244-65767263 Msa0036920:CDS 35.0%
! AATCTGACTGATTCAGATGT+TGG + chr1_1:65767358-65767377 Msa0036920:CDS 35.0%
ATTAGCCACTACATGTATGA+CGG + chr1_1:65767703-65767722 Msa0036920:intron 35.0%
GTGCAGTAAGGACATTAATA+AGG - chr1_1:65767872-65767891 None:intergenic 35.0%
TGAACGAGTGCAATAAATGT+TGG + chr1_1:65768330-65768349 Msa0036920:CDS 35.0%
! GTGCTTATAATTTGCCATTC+AGG + chr1_1:65768446-65768465 Msa0036920:CDS 35.0%
AATCTTCAAACAGACCTGAA+TGG - chr1_1:65768463-65768482 None:intergenic 35.0%
GAAATTATAGGGTTTAGGCA+GGG - chr1_1:65768822-65768841 None:intergenic 35.0%
TGAAATTATAGGGTTTAGGC+AGG - chr1_1:65768823-65768842 None:intergenic 35.0%
GATTGCAACACATCATACAT+TGG - chr1_1:65768919-65768938 None:intergenic 35.0%
TGATTATAACGAGGTTCCAA+TGG + chr1_1:65769037-65769056 Msa0036920:CDS 35.0%
TATTGCATCCCCAGAAAATT+TGG + chr1_1:65769061-65769080 Msa0036920:CDS 35.0%
TTGATAGATCTGGCAATTGA+TGG + chr1_1:65769086-65769105 Msa0036920:CDS 35.0%
GAAGATTGGACATCTAAACT+AGG + chr1_1:65769128-65769147 Msa0036920:CDS 35.0%
CTAAACTAGGTCTTAATCTG+CGG + chr1_1:65769141-65769160 Msa0036920:CDS 35.0%
TTCATTCTCTGAATGTTGTC+AGG - chr1_1:65769323-65769342 None:intergenic 35.0%
TGACAACATTCAGAGAATGA+AGG + chr1_1:65769322-65769341 Msa0036920:CDS 35.0%
AATGAAGGATGATCAATTGC+AGG + chr1_1:65769337-65769356 Msa0036920:CDS 35.0%
CAATTGCAGGAAAGAATTGA+TGG + chr1_1:65769350-65769369 Msa0036920:CDS 35.0%
ACAGAGAAACAACTTTGCTT+TGG - chr1_1:65769425-65769444 None:intergenic 35.0%
!! CACATTTTTGGACTTCTCAT+GGG - chr1_1:65769468-65769487 None:intergenic 35.0%
!! ACACATTTTTGGACTTCTCA+TGG - chr1_1:65769469-65769488 None:intergenic 35.0%
! CAAAACAGCTGACACATTTT+TGG - chr1_1:65769480-65769499 None:intergenic 35.0%
GAGTTTGAATACTAGTGTCT+CGG + chr1_1:65769646-65769665 Msa0036920:CDS 35.0%
!! TATTCTGGCTCACTTACAAA+TGG + chr1_1:65769710-65769729 Msa0036920:CDS 35.0%
GACAAAAATGTCGATGTGTT+TGG + chr1_1:65769737-65769756 Msa0036920:CDS 35.0%
AACCAAATTACTGAAGCCAT+TGG + chr1_1:65769764-65769783 Msa0036920:CDS 35.0%
TACCAATGGCTTCAGTAATT+TGG - chr1_1:65769769-65769788 None:intergenic 35.0%
AGAATTGCTAACCCTTTCTT+CGG - chr1_1:65769951-65769970 None:intergenic 35.0%
TCATTGAAAGAGACAACTGA+GGG + chr1_1:65769974-65769993 Msa0036920:CDS 35.0%
CAATTGTGTGAATCTACAAG+TGG + chr1_1:65770220-65770239 Msa0036920:CDS 35.0%
ATTGTGTGAATCTACAAGTG+GGG + chr1_1:65770222-65770241 Msa0036920:CDS 35.0%
! ATTGCACGATGAAGTGATTT+TGG + chr1_1:65770258-65770277 Msa0036920:CDS 35.0%
TCCTCATCAACTCTAGTAAT+GGG - chr1_1:65770481-65770500 None:intergenic 35.0%
TTCCTCATCAACTCTAGTAA+TGG - chr1_1:65770482-65770501 None:intergenic 35.0%
TTCTCAAACCGAGAAAAAGA+CGG + chr1_1:65770525-65770544 Msa0036920:CDS 35.0%
!! GTTGATTTGTCACAAGATGA+TGG + chr1_1:65770577-65770596 Msa0036920:CDS 35.0%
! TGATTTGTCACAAGATGATG+GGG + chr1_1:65770579-65770598 Msa0036920:CDS 35.0%
AATGCTGGGAAGAAAAAAAG+AGG + chr1_1:65770643-65770662 Msa0036920:CDS 35.0%
AAAGAGGAAAATGGAAGACA+CGG + chr1_1:65770659-65770678 Msa0036920:CDS 35.0%
AGGAAAATCCAGTAGCTAAA+AGG + chr1_1:65770796-65770815 Msa0036920:three_prime_UTR 35.0%
!!! TTGGATTTTTTATCCTTGCG+AGG - chr1_1:65770849-65770868 None:intergenic 35.0%
TTATCAAGGTCACACTTATG+CGG - chr1_1:65770882-65770901 None:intergenic 35.0%
AACTCATACGGCAATTATCA+AGG - chr1_1:65770896-65770915 None:intergenic 35.0%
GTGAATCAATGCGTATTTGT+GGG - chr1_1:65770994-65771013 None:intergenic 35.0%
CCTTTCCATGTGCATTTAAA+GGG - chr1_1:65771041-65771060 None:intergenic 35.0%
ACCTTTCCATGTGCATTTAA+AGG - chr1_1:65771042-65771061 None:intergenic 35.0%
CCTTATCAATGTAAGGTTGA+GGG + chr1_1:65771128-65771147 Msa0036920:three_prime_UTR 35.0%
!! GGTTCATATCAGATTTTAGC+AGG + chr1_1:65771168-65771187 Msa0036920:three_prime_UTR 35.0%
! GGTTAGCTAGCTGTAAATTA+AGG + chr1_1:65771320-65771339 Msa0036920:three_prime_UTR 35.0%
CTAACCACTTCCAAATGAAT+TGG - chr1_1:65771372-65771391 None:intergenic 35.0%
TAGACTTCTAGCGTTATTAG+AGG + chr1_1:65771389-65771408 Msa0036920:three_prime_UTR 35.0%
AGACTTCTAGCGTTATTAGA+GGG + chr1_1:65771390-65771409 Msa0036920:three_prime_UTR 35.0%
! TGTTGATTGCATGTACTTGA+AGG + chr1_1:65771457-65771476 Msa0036920:three_prime_UTR 35.0%
TGTAAACAGGACTATGTAAG+AGG - chr1_1:65771617-65771636 None:intergenic 35.0%
TACACTAGTAAGCTGTAAAC+AGG - chr1_1:65771630-65771649 None:intergenic 35.0%
GCAAAGTAGAGTGCGAAATT+TGG - chr1_1:65762612-65762631 None:intergenic 40.0%
TTTCCCCAAATCCCCAATTT+AGG + chr1_1:65762733-65762752 Msa0036920:five_prime_UTR 40.0%
TTCCCCAAATCCCCAATTTA+GGG + chr1_1:65762734-65762753 Msa0036920:five_prime_UTR 40.0%
AACCCTAAATTGGGGATTTG+GGG - chr1_1:65762739-65762758 None:intergenic 40.0%
GTAATGCTGAAATCCCCAAT+TGG + chr1_1:65762880-65762899 Msa0036920:CDS 40.0%
!! AAATCCCCAATTGGCTTGAA+GGG + chr1_1:65762889-65762908 Msa0036920:CDS 40.0%
GTATCAGTTGGTCGAAATTC+AGG - chr1_1:65762927-65762946 None:intergenic 40.0%
TCAAAGATTGAGCAGAAAGC+TGG + chr1_1:65762975-65762994 Msa0036920:CDS 40.0%
GAGCAGAAAGCTGGTAAATT+TGG + chr1_1:65762984-65763003 Msa0036920:CDS 40.0%
!!! TTTTTTGAAGGCTTGGGCAA+TGG - chr1_1:65763029-65763048 None:intergenic 40.0%
! GGGCCAGATATTAGTTCTTT+GGG + chr1_1:65763098-65763117 Msa0036920:CDS 40.0%
GCACCCAAAGAACTAATATC+TGG - chr1_1:65763104-65763123 None:intergenic 40.0%
! GATATTAGTTCTTTGGGTGC+TGG + chr1_1:65763104-65763123 Msa0036920:CDS 40.0%
GCTGGTAATTCTTGGAAAAC+GGG + chr1_1:65763122-65763141 Msa0036920:CDS 40.0%
! AATTCTTGGAAAACGGGTTC+TGG + chr1_1:65763128-65763147 Msa0036920:CDS 40.0%
! ATTCTTGGAAAACGGGTTCT+GGG + chr1_1:65763129-65763148 Msa0036920:CDS 40.0%
TCTGGGGATAGTAGTAATGA+TGG + chr1_1:65763146-65763165 Msa0036920:CDS 40.0%
CTGTTGCCTTGTAGTAAACA+CGG - chr1_1:65763183-65763202 None:intergenic 40.0%
CATGTGTCCATAAGCAAGTT+TGG + chr1_1:65763255-65763274 Msa0036920:CDS 40.0%
! CACTTTGCCAAACTTGCTTA+TGG - chr1_1:65763265-65763284 None:intergenic 40.0%
CATAAGCAAGTTTGGCAAAG+TGG + chr1_1:65763263-65763282 Msa0036920:CDS 40.0%
!!! ACTTTTGCCAGAAGCGTTTT+GGG + chr1_1:65763326-65763345 Msa0036920:CDS 40.0%
! TGTTTCTCCATTGGTTGTAG+AGG + chr1_1:65763361-65763380 Msa0036920:CDS 40.0%
AACACGATTCTGCATGACTT+GGG - chr1_1:65763610-65763629 None:intergenic 40.0%
AAACACGATTCTGCATGACT+TGG - chr1_1:65763611-65763630 None:intergenic 40.0%
GTCAACATCTACACCAAATG+AGG + chr1_1:65763658-65763677 Msa0036920:CDS 40.0%
GATGCTGACAATGATATGCA+AGG + chr1_1:65763710-65763729 Msa0036920:CDS 40.0%
GGAAGCTTTCAAATAGTCCT+TGG + chr1_1:65763744-65763763 Msa0036920:CDS 40.0%
! GGAATAACTTGCAGATTCCA+AGG - chr1_1:65763764-65763783 None:intergenic 40.0%
TTCATGCCAGATGATATTCC+TGG + chr1_1:65763809-65763828 Msa0036920:CDS 40.0%
GTAACACCAGGAATATCATC+TGG - chr1_1:65763818-65763837 None:intergenic 40.0%
!! TGTTGTTTAGTTGGTTTGCC+TGG + chr1_1:65763861-65763880 Msa0036920:CDS 40.0%
GATGACTTCCTCAAAAGCAA+AGG - chr1_1:65763972-65763991 None:intergenic 40.0%
! GGTGGTGATGTTGATCAATT+AGG + chr1_1:65764007-65764026 Msa0036920:CDS 40.0%
! GAATCACAACGCACTTTTCT+TGG - chr1_1:65764177-65764196 None:intergenic 40.0%
ATTTCCTAGCAAATGGCCAA+TGG + chr1_1:65764218-65764237 Msa0036920:intron 40.0%
TTTCCTAGCAAATGGCCAAT+GGG + chr1_1:65764219-65764238 Msa0036920:intron 40.0%
!! AAAGTGATGGATATTGAGGC+AGG - chr1_1:65764264-65764283 None:intergenic 40.0%
GAATGTGTGAATTCTCTTGG+TGG + chr1_1:65764394-65764413 Msa0036920:intron 40.0%
!! GTGAATTCTCTTGGTGGTTT+TGG + chr1_1:65764400-65764419 Msa0036920:intron 40.0%
CCCGACAATGTGTTTATAAG+TGG + chr1_1:65764849-65764868 Msa0036920:intron 40.0%
AAGTCTCGACAATTCAACAC+AGG - chr1_1:65764943-65764962 None:intergenic 40.0%
!!! CCAGCTGCTTTGAAACTTTT+GGG + chr1_1:65765238-65765257 Msa0036920:intron 40.0%
TCTAGGTTAGTACAGAATCC+TGG + chr1_1:65765483-65765502 Msa0036920:intron 40.0%
TATCATGTAGGATTCAGCCA+CGG + chr1_1:65765534-65765553 Msa0036920:CDS 40.0%
!! GTGTGCTATTTAGACCTGTT+TGG + chr1_1:65765660-65765679 Msa0036920:intron 40.0%
AAGCCCAAAATTCACTACCA+GGG - chr1_1:65765898-65765917 None:intergenic 40.0%
AAAGCCCAAAATTCACTACC+AGG - chr1_1:65765899-65765918 None:intergenic 40.0%
! TTTGCCTCTTTTGACAACTC+TGG - chr1_1:65766092-65766111 None:intergenic 40.0%
TTGACGCTCTTTCACAATAG+CGG - chr1_1:65766120-65766139 None:intergenic 40.0%
CAATGTGAGAAGACCAATAG+AGG + chr1_1:65766137-65766156 Msa0036920:intron 40.0%
TTTCTCACTAGAGCCTCTAT+TGG - chr1_1:65766153-65766172 None:intergenic 40.0%
TGTTCTAGTGAGGAACCTTT+AGG + chr1_1:65766204-65766223 Msa0036920:intron 40.0%
! GAACCTTTAGGAGAAACCAA+CGG + chr1_1:65766216-65766235 Msa0036920:intron 40.0%
!! TTTCCGTTGGTTTCTCCTAA+AGG - chr1_1:65766222-65766241 None:intergenic 40.0%
! TAGAGCAAGTTCTTTTCCGT+TGG - chr1_1:65766235-65766254 None:intergenic 40.0%
!! GTGAGCCTCTAAGATACAAA+GGG - chr1_1:65766296-65766315 None:intergenic 40.0%
!! AGTGAGCCTCTAAGATACAA+AGG - chr1_1:65766297-65766316 None:intergenic 40.0%
!!! TAAAGGTTTTAACTGTGGGG+AGG + chr1_1:65766399-65766418 Msa0036920:intron 40.0%
CAAGTAAAGCAGTTGCTGAT+GGG - chr1_1:65766512-65766531 None:intergenic 40.0%
GGCAACCATTCATATTCCAT+AGG - chr1_1:65766614-65766633 None:intergenic 40.0%
CTCTAACTCTTTGTGATGCA+TGG + chr1_1:65766668-65766687 Msa0036920:intron 40.0%
ACACCAGGTAATAGTGTTCT+TGG - chr1_1:65767040-65767059 None:intergenic 40.0%
AAGCTGCTATCCATTCTTCT+TGG + chr1_1:65767148-65767167 Msa0036920:CDS 40.0%
CGATGAGATGAGTTTGTACA+TGG + chr1_1:65767333-65767352 Msa0036920:CDS 40.0%
GAATCAGTTTGGAAGTGACA+TGG - chr1_1:65767397-65767416 None:intergenic 40.0%
! TGTCACTTCCAAACTGATTC+AGG + chr1_1:65767397-65767416 Msa0036920:CDS 40.0%
ACTTGAGACTGCACTATGAA+GGG - chr1_1:65767554-65767573 None:intergenic 40.0%
TACTTGAGACTGCACTATGA+AGG - chr1_1:65767555-65767574 None:intergenic 40.0%
TAACTCCGTCATACATGTAG+TGG - chr1_1:65767711-65767730 None:intergenic 40.0%
! GTATTCTATTGGTTGGATCC+AGG - chr1_1:65767796-65767815 None:intergenic 40.0%
!! GGACATTAATAAGGTGCTGA+GGG - chr1_1:65767863-65767882 None:intergenic 40.0%
!! AGGACATTAATAAGGTGCTG+AGG - chr1_1:65767864-65767883 None:intergenic 40.0%
ACTGAAGAATCAGTGCAGTA+AGG - chr1_1:65767884-65767903 None:intergenic 40.0%
! TTCTGAACTTGCTTCTGCAA+AGG + chr1_1:65768289-65768308 Msa0036920:CDS 40.0%
TGGCTTCAAAAATGTACTGG+AGG - chr1_1:65768360-65768379 None:intergenic 40.0%
!!! CCAGTACATTTTTGAAGCCA+CGG + chr1_1:65768360-65768379 Msa0036920:CDS 40.0%
!!! CTGGCATGTGCCTTTATTTT+CGG - chr1_1:65768987-65769006 None:intergenic 40.0%
! GAAAATAAAGGCACATGCCA+GGG + chr1_1:65768986-65769005 Msa0036920:CDS 40.0%
! AGTTCCTTTTACGCTAGCAT+TGG + chr1_1:65769202-65769221 Msa0036920:CDS 40.0%
! GTTCCTTTTACGCTAGCATT+GGG + chr1_1:65769203-65769222 Msa0036920:CDS 40.0%
! TTCCTTTTACGCTAGCATTG+GGG + chr1_1:65769204-65769223 Msa0036920:CDS 40.0%
CAGTTCTATGATAAACGTCC+TGG + chr1_1:65769230-65769249 Msa0036920:CDS 40.0%
CACAGAAAGCTCGATCTAAA+AGG + chr1_1:65769273-65769292 Msa0036920:CDS 40.0%
! AAGCAGTTTCTTTTCAGCAG+TGG - chr1_1:65769378-65769397 None:intergenic 40.0%
! TTGTTTCTCTGTAGCAAGCA+CGG + chr1_1:65769433-65769452 Msa0036920:CDS 40.0%
AGCTTGACACAGACAATTTC+AGG + chr1_1:65769534-65769553 Msa0036920:CDS 40.0%
AAAATGCAGCATAGAGAACC+AGG + chr1_1:65769670-65769689 Msa0036920:CDS 40.0%
! GTTATCACACTTGCTACCAA+TGG - chr1_1:65769783-65769802 None:intergenic 40.0%
TCTTCGGCCTGGTTATTAAT+TGG - chr1_1:65769935-65769954 None:intergenic 40.0%
TTAATAACCAGGCCGAAGAA+AGG + chr1_1:65769936-65769955 Msa0036920:CDS 40.0%
TAATAACCAGGCCGAAGAAA+GGG + chr1_1:65769937-65769956 Msa0036920:CDS 40.0%
GTCATTGAAAGAGACAACTG+AGG + chr1_1:65769973-65769992 Msa0036920:CDS 40.0%
!! CATCAACTCTAGTAATGGGT+TGG - chr1_1:65770477-65770496 None:intergenic 40.0%
!! ACCCATTACTAGAGTTGATG+AGG + chr1_1:65770477-65770496 Msa0036920:CDS 40.0%
TCTCAAACCGAGAAAAAGAC+GGG + chr1_1:65770526-65770545 Msa0036920:CDS 40.0%
GGTGGCAGAGAAAATGTAAA+TGG + chr1_1:65770547-65770566 Msa0036920:CDS 40.0%
AAGTTCCCAGATCAAATGCT+GGG + chr1_1:65770629-65770648 Msa0036920:CDS 40.0%
TTCTTCCCAGCATTTGATCT+GGG - chr1_1:65770637-65770656 None:intergenic 40.0%
TTTCTTCCCAGCATTTGATC+TGG - chr1_1:65770638-65770657 None:intergenic 40.0%
TTATAAGAAGTCCGTGTGAG+AGG + chr1_1:65770709-65770728 Msa0036920:exon 40.0%
GTAGCAATCTTCTCAGTTCT+TGG - chr1_1:65770741-65770760 None:intergenic 40.0%
AGAACTGAGAAGATTGCTAC+AGG + chr1_1:65770741-65770760 Msa0036920:three_prime_UTR 40.0%
! ATTGCTACAGGCAAAAGTGT+AGG + chr1_1:65770753-65770772 Msa0036920:three_prime_UTR 40.0%
! TTGCTACAGGCAAAAGTGTA+GGG + chr1_1:65770754-65770773 Msa0036920:three_prime_UTR 40.0%
! CTGGATTTTCCTCCTCATTT+TGG - chr1_1:65770788-65770807 None:intergenic 40.0%
ATCCAGTAGCTAAAAGGACA+CGG + chr1_1:65770802-65770821 Msa0036920:three_prime_UTR 40.0%
! CTTATGCGGCCTTTTAACAT+TGG - chr1_1:65770868-65770887 None:intergenic 40.0%
GGTGAATCAATGCGTATTTG+TGG - chr1_1:65770995-65771014 None:intergenic 40.0%
ATAGGCCCTTTAAATGCACA+TGG + chr1_1:65771033-65771052 Msa0036920:three_prime_UTR 40.0%
CCCTTTAAATGCACATGGAA+AGG + chr1_1:65771038-65771057 Msa0036920:three_prime_UTR 40.0%
GTTGTTCCATGTCATTCAAG+TGG + chr1_1:65771060-65771079 Msa0036920:three_prime_UTR 40.0%
CATGTCATTCAAGTGGTCAT+GGG + chr1_1:65771067-65771086 Msa0036920:three_prime_UTR 40.0%
! GGAGAAGCCTTATCAATGTA+AGG + chr1_1:65771121-65771140 Msa0036920:three_prime_UTR 40.0%
GCCTTATCAATGTAAGGTTG+AGG + chr1_1:65771127-65771146 Msa0036920:three_prime_UTR 40.0%
CCCTCAACCTTACATTGATA+AGG - chr1_1:65771131-65771150 None:intergenic 40.0%
!! TATCAGATTTTAGCAGGCAC+AGG + chr1_1:65771174-65771193 Msa0036920:three_prime_UTR 40.0%
CTTTCTGACCATAAGCATTC+TGG + chr1_1:65771299-65771318 Msa0036920:three_prime_UTR 40.0%
CTAGCTAACCAGAATGCTTA+TGG - chr1_1:65771310-65771329 None:intergenic 40.0%
TGCTCAATGCCCAATTCATT+TGG + chr1_1:65771359-65771378 Msa0036920:three_prime_UTR 40.0%
ATGCCCAATTCATTTGGAAG+TGG + chr1_1:65771365-65771384 Msa0036920:three_prime_UTR 40.0%
!! GAAATCCCCAATTGGCTTGA+AGG + chr1_1:65762888-65762907 Msa0036920:CDS 45.0%
CAATTCAGGCCGCTTCAAAA+GGG - chr1_1:65763078-65763097 None:intergenic 45.0%
!!! CTTTTGAAGCGGCCTGAATT+GGG + chr1_1:65763077-65763096 Msa0036920:CDS 45.0%
!!! TTTTGAAGCGGCCTGAATTG+GGG + chr1_1:65763078-65763097 Msa0036920:CDS 45.0%
CTAATATCTGGCCCCAATTC+AGG - chr1_1:65763092-65763111 None:intergenic 45.0%
! GGGGCCAGATATTAGTTCTT+TGG + chr1_1:65763097-65763116 Msa0036920:CDS 45.0%
!! CTTTGGGTGCTGGTAATTCT+TGG + chr1_1:65763114-65763133 Msa0036920:CDS 45.0%
! TTCTTGGAAAACGGGTTCTG+GGG + chr1_1:65763130-65763149 Msa0036920:CDS 45.0%
!! GTAGTAATGATGGAGTGTCG+CGG + chr1_1:65763156-65763175 Msa0036920:CDS 45.0%
!! TAGTAATGATGGAGTGTCGC+GGG + chr1_1:65763157-65763176 Msa0036920:CDS 45.0%
CGTGTTTACTACAAGGCAAC+AGG + chr1_1:65763181-65763200 Msa0036920:CDS 45.0%
TACTACAAGGCAACAGGAAG+TGG + chr1_1:65763187-65763206 Msa0036920:CDS 45.0%
ACTACAAGGCAACAGGAAGT+GGG + chr1_1:65763188-65763207 Msa0036920:CDS 45.0%
AGGGGTTGTTCAGAAGTCAA+TGG + chr1_1:65763232-65763251 Msa0036920:CDS 45.0%
!!! GACTTTTGCCAGAAGCGTTT+TGG + chr1_1:65763325-65763344 Msa0036920:CDS 45.0%
AACATGGCCTCTACAACCAA+TGG - chr1_1:65763371-65763390 None:intergenic 45.0%
! TGGTTGTAGAGGCCATGTTT+TGG + chr1_1:65763372-65763391 Msa0036920:CDS 45.0%
!! TGTAGAGGCCATGTTTTGGA+AGG + chr1_1:65763376-65763395 Msa0036920:CDS 45.0%
TGAAGCTGCCTTCCAAAACA+TGG - chr1_1:65763387-65763406 None:intergenic 45.0%
ATCGTAGTCATCGAAGGCAA+CGG + chr1_1:65763480-65763499 Msa0036920:CDS 45.0%
ACACGATTCTGCATGACTTG+GGG - chr1_1:65763609-65763628 None:intergenic 45.0%
!! AATGATATGCAAGGCACTGC+TGG + chr1_1:65763719-65763738 Msa0036920:CDS 45.0%
CAAGTTATTCCTCGTGCTTC+AGG + chr1_1:65763773-65763792 Msa0036920:CDS 45.0%
ATCATGGGTGAAGTAACACC+AGG - chr1_1:65763830-65763849 None:intergenic 45.0%
TTCATGATCCTCTACATGCC+AGG - chr1_1:65763882-65763901 None:intergenic 45.0%
!! ACACTGGCTCATCAAAGACT+TGG + chr1_1:65763924-65763943 Msa0036920:CDS 45.0%
!! GGTTTTGGCACTAGACTTAC+TGG + chr1_1:65764415-65764434 Msa0036920:intron 45.0%
TCATTGTGTCCACAAACCAC+AGG + chr1_1:65764626-65764645 Msa0036920:intron 45.0%
CATTGTGTCCACAAACCACA+GGG + chr1_1:65764627-65764646 Msa0036920:intron 45.0%
GTCTCACATCGGATAAGAGA+TGG + chr1_1:65764826-65764845 Msa0036920:intron 45.0%
!!! ACCTCACAAGCTGGTTTTGT+GGG + chr1_1:65764883-65764902 Msa0036920:intron 45.0%
!!! TGGTTTTGTGGGGTTGTGTT+AGG + chr1_1:65764894-65764913 Msa0036920:intron 45.0%
! CTTTGGAGGACTTGGATGTA+CGG - chr1_1:65765068-65765087 None:intergenic 45.0%
!!! GCCAGCTGCTTTGAAACTTT+TGG + chr1_1:65765237-65765256 Msa0036920:intron 45.0%
CCCAAAAGTTTCAAAGCAGC+TGG - chr1_1:65765241-65765260 None:intergenic 45.0%
CTGAGGTAGTTGTTGCATCT+GGG + chr1_1:65765284-65765303 Msa0036920:CDS 45.0%
TAAGCAACTAACCTGCAGCA+AGG - chr1_1:65765313-65765332 None:intergenic 45.0%
TCATGCACCATATGCCAAAC+AGG - chr1_1:65765677-65765696 None:intergenic 45.0%
ATGAAACCAATGATGCTCCC+TGG + chr1_1:65765878-65765897 Msa0036920:intron 45.0%
!! TGCTCCCTGGTAGTGAATTT+TGG + chr1_1:65765891-65765910 Msa0036920:intron 45.0%
!! GCTCCCTGGTAGTGAATTTT+GGG + chr1_1:65765892-65765911 Msa0036920:intron 45.0%
! CCTCTTTTGACAACTCTGGT+CGG - chr1_1:65766088-65766107 None:intergenic 45.0%
!! CTAACTTTGGGACTCCACAA+TGG + chr1_1:65766425-65766444 Msa0036920:CDS 45.0%
TTAGCTATGCCAAGCCATTG+TGG - chr1_1:65766442-65766461 None:intergenic 45.0%
GCAAGTAAAGCAGTTGCTGA+TGG - chr1_1:65766513-65766532 None:intergenic 45.0%
GTGCCAAGAACACTATTACC+TGG + chr1_1:65767034-65767053 Msa0036920:CDS 45.0%
TGGCGATATTTGCCAGAATC+TGG - chr1_1:65767220-65767239 None:intergenic 45.0%
TCATCTCATCGAGCAGACAA+TGG - chr1_1:65767324-65767343 None:intergenic 45.0%
CCAATGCTCCTGAATCAGTT+TGG - chr1_1:65767408-65767427 None:intergenic 45.0%
! CCAAACTGATTCAGGAGCAT+TGG + chr1_1:65767405-65767424 Msa0036920:CDS 45.0%
!! TTCAGGAGCATTGGTTTGTG+TGG + chr1_1:65767414-65767433 Msa0036920:CDS 45.0%
!! TCAGGAGCATTGGTTTGTGT+GGG + chr1_1:65767415-65767434 Msa0036920:CDS 45.0%
! TGTGTGGGTTGTGGAATACT+TGG + chr1_1:65767430-65767449 Msa0036920:CDS 45.0%
GATTCCTCTCTGAACTCTGT+TGG + chr1_1:65767526-65767545 Msa0036920:CDS 45.0%
TTCACAACGAACAGAGCAGA+GGG - chr1_1:65768053-65768072 None:intergenic 45.0%
ATTCACAACGAACAGAGCAG+AGG - chr1_1:65768054-65768073 None:intergenic 45.0%
TCAGAAACAGAAAGATCCCC+TGG - chr1_1:65768275-65768294 None:intergenic 45.0%
TGCTTCTGCAAAGGATTTGC+CGG + chr1_1:65768298-65768317 Msa0036920:CDS 45.0%
CACTCGTTCAATGACTGATC+CGG - chr1_1:65768320-65768339 None:intergenic 45.0%
CCGTGGCTTCAAAAATGTAC+TGG - chr1_1:65768363-65768382 None:intergenic 45.0%
TCGTGAAGGTCAGAAGAAAC+TGG - chr1_1:65768941-65768960 None:intergenic 45.0%
! CGAAAATAAAGGCACATGCC+AGG + chr1_1:65768985-65769004 Msa0036920:CDS 45.0%
TCTGGGGATGCAATATCCAT+TGG - chr1_1:65769056-65769075 None:intergenic 45.0%
ATCCCCAATGCTAGCGTAAA+AGG - chr1_1:65769209-65769228 None:intergenic 45.0%
!! TGTGTCAGCTGTTTTGAGTG+CGG + chr1_1:65769484-65769503 Msa0036920:CDS 45.0%
AGTGATTGTGCATTGTCACG+TGG + chr1_1:65769557-65769576 Msa0036920:CDS 45.0%
GTCTTTGACTGAAATGGACG+AGG + chr1_1:65770006-65770025 Msa0036920:CDS 45.0%
ACTTCACAAACGTCTGCAGT+AGG - chr1_1:65770070-65770089 None:intergenic 45.0%
! GCAGAAGCATAAAGCTCTCT+TGG - chr1_1:65770094-65770113 None:intergenic 45.0%
ATGCAGCAAGAACGACAAGT+TGG + chr1_1:65770148-65770167 Msa0036920:CDS 45.0%
! GAACGACAAGTTGGAGAAAG+TGG + chr1_1:65770157-65770176 Msa0036920:CDS 45.0%
TACAAGTGGGGAATATGCAG+AGG + chr1_1:65770234-65770253 Msa0036920:CDS 45.0%
ACAAGTGGGGAATATGCAGA+GGG + chr1_1:65770235-65770254 Msa0036920:CDS 45.0%
!! ACATGAGTCTTCTTTGGGAC+AGG - chr1_1:65770416-65770435 None:intergenic 45.0%
GGAACTCTCTACATCAATCC+AGG + chr1_1:65770498-65770517 Msa0036920:CDS 45.0%
! TCTCGGTTTGAGAACATTCC+TGG - chr1_1:65770519-65770538 None:intergenic 45.0%
GAAGTTCCCAGATCAAATGC+TGG + chr1_1:65770628-65770647 Msa0036920:CDS 45.0%
! TGCTACAGGCAAAAGTGTAG+GGG + chr1_1:65770755-65770774 Msa0036920:three_prime_UTR 45.0%
!! TTCCGTGTCCTTTTAGCTAC+TGG - chr1_1:65770807-65770826 None:intergenic 45.0%
!! CCTTGGTGGTGAAACTCATA+CGG - chr1_1:65770908-65770927 None:intergenic 45.0%
GTAACCTTTGCCCACATGAA+GGG + chr1_1:65770949-65770968 Msa0036920:three_prime_UTR 45.0%
TATCATCCTCATGAACACGC+TGG - chr1_1:65771016-65771035 None:intergenic 45.0%
AGCGTGTTCATGAGGATGAT+AGG + chr1_1:65771015-65771034 Msa0036920:three_prime_UTR 45.0%
CCATGACCACTTGAATGACA+TGG - chr1_1:65771069-65771088 None:intergenic 45.0%
CCATGTCATTCAAGTGGTCA+TGG + chr1_1:65771066-65771085 Msa0036920:three_prime_UTR 45.0%
! AGCATCTAAGGGTGCATACT+GGG + chr1_1:65771099-65771118 Msa0036920:three_prime_UTR 45.0%
GCAACCCTTCAAGCCAATTG+GGG - chr1_1:65762896-65762915 None:intergenic 50.0%
GGCAACCCTTCAAGCCAATT+GGG - chr1_1:65762897-65762916 None:intergenic 50.0%
TGGCAACCCTTCAAGCCAAT+TGG - chr1_1:65762898-65762917 None:intergenic 50.0%
TTGAAGGCTTGGGCAATGGT+GGG - chr1_1:65763025-65763044 None:intergenic 50.0%
TTTGAAGGCTTGGGCAATGG+TGG - chr1_1:65763026-65763045 None:intergenic 50.0%
CCAATTCAGGCCGCTTCAAA+AGG - chr1_1:65763079-65763098 None:intergenic 50.0%
!!! CCTTTTGAAGCGGCCTGAAT+TGG + chr1_1:65763076-65763095 Msa0036920:CDS 50.0%
!!! TGCCAGAAGCGTTTTGGGTA+CGG + chr1_1:65763331-65763350 Msa0036920:CDS 50.0%
GGCGAAGGATGTTTCTCCAT+TGG + chr1_1:65763352-65763371 Msa0036920:CDS 50.0%
GAGTATGCTAATGACGTGCC+TGG + chr1_1:65763425-65763444 Msa0036920:CDS 50.0%
TGCTAATGACGTGCCTGGTT+CGG + chr1_1:65763430-65763449 Msa0036920:CDS 50.0%
TTCGGCGTTTGGAGAATCAC+AGG + chr1_1:65763448-65763467 Msa0036920:CDS 50.0%
TCGGCGTTTGGAGAATCACA+GGG + chr1_1:65763449-65763468 Msa0036920:CDS 50.0%
GTCATCGAAGGCAACGGAAA+AGG + chr1_1:65763486-65763505 Msa0036920:CDS 50.0%
! GATTCTGCATGACTTGGGGA+AGG - chr1_1:65763605-65763624 None:intergenic 50.0%
GAAGGCTGTGAAGCCTCATT+TGG - chr1_1:65763674-65763693 None:intergenic 50.0%
TGAGGCTTCACAGCCTTCTA+AGG + chr1_1:65763676-65763695 Msa0036920:CDS 50.0%
!! ATATGCAAGGCACTGCTGGT+TGG + chr1_1:65763723-65763742 Msa0036920:CDS 50.0%
!! TTGGTTTGCCTGGCATGTAG+AGG + chr1_1:65763871-65763890 Msa0036920:CDS 50.0%
! AAGACTTGGTACTCCGTTCC+TGG + chr1_1:65763938-65763957 Msa0036920:CDS 50.0%
AGACCCATTGGCCATTTGCT+AGG - chr1_1:65764225-65764244 None:intergenic 50.0%
GATCTGAACAGGAGACCCAT+TGG - chr1_1:65764237-65764256 None:intergenic 50.0%
GATGGATATTGAGGCAGGCA+TGG - chr1_1:65764259-65764278 None:intergenic 50.0%
ATGTTAGTGTCTGTGCCCTG+TGG - chr1_1:65764645-65764664 None:intergenic 50.0%
ACAGGGCACAGACACTAACA+TGG + chr1_1:65764644-65764663 Msa0036920:intron 50.0%
CAAAACCAGCTTGTGAGGTG+AGG - chr1_1:65764882-65764901 None:intergenic 50.0%
!!! CACCTCACAAGCTGGTTTTG+TGG + chr1_1:65764882-65764901 Msa0036920:intron 50.0%
!!! CCTCACAAGCTGGTTTTGTG+GGG + chr1_1:65764884-65764903 Msa0036920:intron 50.0%
CGTACATCCAAGTCCTCCAA+AGG + chr1_1:65765066-65765085 Msa0036920:intron 50.0%
CCAGATGCAACAACTACCTC+AGG - chr1_1:65765286-65765305 None:intergenic 50.0%
CCTGAGGTAGTTGTTGCATC+TGG + chr1_1:65765283-65765302 Msa0036920:CDS 50.0%
CCTAGAAAGAAACACCGGCA+CGG - chr1_1:65765469-65765488 None:intergenic 50.0%
!! TCACTACCAGGGAGCATCAT+TGG - chr1_1:65765887-65765906 None:intergenic 50.0%
TTGGGCTTTCAGATGCCAAC+AGG + chr1_1:65765910-65765929 Msa0036920:intron 50.0%
CCGACCAGAGTTGTCAAAAG+AGG + chr1_1:65766085-65766104 Msa0036920:intron 50.0%
! TTTGGGACTCCACAATGGCT+TGG + chr1_1:65766430-65766449 Msa0036920:CDS 50.0%
! AGTTGCTGATGGGAGAGCAT+AGG - chr1_1:65766502-65766521 None:intergenic 50.0%
!! ACATGGATGGGCTAGTTGAG+TGG + chr1_1:65766704-65766723 Msa0036920:intron 50.0%
!! CATGGATGGGCTAGTTGAGT+GGG + chr1_1:65766705-65766724 Msa0036920:intron 50.0%
!! GCATTGGTTTGTGTGGGTTG+TGG + chr1_1:65767421-65767440 Msa0036920:CDS 50.0%
AGCAGAGGGTAAATGGCTAG+GGG - chr1_1:65768039-65768058 None:intergenic 50.0%
GAGCAGAGGGTAAATGGCTA+GGG - chr1_1:65768040-65768059 None:intergenic 50.0%
AGAGCAGAGGGTAAATGGCT+AGG - chr1_1:65768041-65768060 None:intergenic 50.0%
CGAACAGAGCAGAGGGTAAA+TGG - chr1_1:65768046-65768065 None:intergenic 50.0%
! GAAGCCACGGATTTTCTGCT+TGG + chr1_1:65768373-65768392 Msa0036920:CDS 50.0%
TGCTCCAAGCAGAAAATCCG+TGG - chr1_1:65768380-65768399 None:intergenic 50.0%
GTGGAGATGTTGCAGAGCAA+AGG + chr1_1:65768413-65768432 Msa0036920:CDS 50.0%
GAGATGTTGCAGAGCAAAGG+TGG + chr1_1:65768416-65768435 Msa0036920:CDS 50.0%
TATCTCTTCTGCAACTGCCC+TGG - chr1_1:65769006-65769025 None:intergenic 50.0%
TAGTGGGAGCTTCAGCATTC+TGG - chr1_1:65769622-65769641 None:intergenic 50.0%
AGTTGGAGAAAGTGGCGAAC+AGG + chr1_1:65770165-65770184 Msa0036920:CDS 50.0%
GGAGTCTTCAAAGCAGAGTC+TGG + chr1_1:65770279-65770298 Msa0036920:CDS 50.0%
CAAACCGAGAAAAAGACGGG+TGG + chr1_1:65770529-65770548 Msa0036920:CDS 50.0%
! TCTGCCACCCGTCTTTTTCT+CGG - chr1_1:65770536-65770555 None:intergenic 50.0%
AGGGGACAACAGCCAAAATG+AGG + chr1_1:65770773-65770792 Msa0036920:three_prime_UTR 50.0%
GGACAACAGCCAAAATGAGG+AGG + chr1_1:65770776-65770795 Msa0036920:three_prime_UTR 50.0%
CTTGCGAGGAACTGAAGCTT+CGG - chr1_1:65770835-65770854 None:intergenic 50.0%
CCGTATGAGTTTCACCACCA+AGG + chr1_1:65770905-65770924 Msa0036920:three_prime_UTR 50.0%
CAACTGTAACTCAGCCTTGG+TGG - chr1_1:65770922-65770941 None:intergenic 50.0%
GTGCAACTGTAACTCAGCCT+TGG - chr1_1:65770925-65770944 None:intergenic 50.0%
CGTAACCTTTGCCCACATGA+AGG + chr1_1:65770948-65770967 Msa0036920:three_prime_UTR 50.0%
TCTTACCGCACCCTTCATGT+GGG - chr1_1:65770962-65770981 None:intergenic 50.0%
TTCTTACCGCACCCTTCATG+TGG - chr1_1:65770963-65770982 None:intergenic 50.0%
GATTCACCAGCGTGTTCATG+AGG + chr1_1:65771007-65771026 Msa0036920:three_prime_UTR 50.0%
CATTCAAGTGGTCATGGGCT+AGG + chr1_1:65771072-65771091 Msa0036920:three_prime_UTR 50.0%
! GGCTAGGACAGAGCATCTAA+GGG + chr1_1:65771088-65771107 Msa0036920:three_prime_UTR 50.0%
! GAGCATCTAAGGGTGCATAC+TGG + chr1_1:65771098-65771117 Msa0036920:three_prime_UTR 50.0%
! GCATCTAAGGGTGCATACTG+GGG + chr1_1:65771100-65771119 Msa0036920:three_prime_UTR 50.0%
CAATGTAAGGTTGAGGGCTG+CGG + chr1_1:65771134-65771153 Msa0036920:three_prime_UTR 50.0%
!! CAGATTTTAGCAGGCACAGG+CGG + chr1_1:65771177-65771196 Msa0036920:three_prime_UTR 50.0%
! TTGGCTTGAAGGGTTGCCAC+TGG + chr1_1:65762899-65762918 Msa0036920:CDS 55.0%
GGTCGAAATTCAGGTGCCAG+TGG - chr1_1:65762918-65762937 None:intergenic 55.0%
!! AAGCGTTTTGGGTACGGCGA+AGG + chr1_1:65763337-65763356 Msa0036920:CDS 55.0%
GATTCTCCAAACGCCGAACC+AGG - chr1_1:65763446-65763465 None:intergenic 55.0%
GTTAGTGAGCCTGAAGCACG+AGG - chr1_1:65763785-65763804 None:intergenic 55.0%
TGAGGAAGTCATCCGCACAG+AGG + chr1_1:65763979-65763998 Msa0036920:CDS 55.0%
GAGGAAGTCATCCGCACAGA+GGG + chr1_1:65763980-65763999 Msa0036920:CDS 55.0%
GTCATCCGCACAGAGGGTTA+TGG + chr1_1:65763986-65764005 Msa0036920:CDS 55.0%
ATCCGCACAGAGGGTTATGG+TGG + chr1_1:65763989-65764008 Msa0036920:CDS 55.0%
CACCACCATAACCCTCTGTG+CGG - chr1_1:65763994-65764013 None:intergenic 55.0%
AGGCAGGCATGGATCTGAAC+AGG - chr1_1:65764248-65764267 None:intergenic 55.0%
TGTCTGTGCCCTGTGGTTTG+TGG - chr1_1:65764638-65764657 None:intergenic 55.0%
GCAATCCTCACCTCACAAGC+TGG + chr1_1:65764874-65764893 Msa0036920:intron 55.0%
CCCCACAAAACCAGCTTGTG+AGG - chr1_1:65764887-65764906 None:intergenic 55.0%
ATGTACGGCCCGTACAGTAC+GGG - chr1_1:65765053-65765072 None:intergenic 55.0%
GATGTACGGCCCGTACAGTA+CGG - chr1_1:65765054-65765073 None:intergenic 55.0%
! CATCTGGGATTCCTTGCTGC+AGG + chr1_1:65765299-65765318 Msa0036920:CDS 55.0%
! CCGTGCCGGTGTTTCTTTCT+AGG + chr1_1:65765466-65765485 Msa0036920:intron 55.0%
TGTGGGGAGGCTGCTAACTT+TGG + chr1_1:65766412-65766431 Msa0036920:CDS 55.0%
GTGGGGAGGCTGCTAACTTT+GGG + chr1_1:65766413-65766432 Msa0036920:CDS 55.0%
!! GATGGGCTAGTTGAGTGGGT+AGG + chr1_1:65766709-65766728 Msa0036920:intron 55.0%
GGAGCCAACAGAGTTCAGAG+AGG - chr1_1:65767533-65767552 None:intergenic 55.0%
CTGCTTGGAGCATGCTGTTC+AGG + chr1_1:65768388-65768407 Msa0036920:CDS 55.0%
!! GGAGCATGCTGTTCAGGTTG+TGG + chr1_1:65768394-65768413 Msa0036920:CDS 55.0%
CCACAGTAGCGAGAGCAGTT+TGG - chr1_1:65769895-65769914 None:intergenic 55.0%
CCAAACTGCTCTCGCTACTG+TGG + chr1_1:65769892-65769911 Msa0036920:CDS 55.0%
ACTGCTCTCGCTACTGTGGA+TGG + chr1_1:65769896-65769915 Msa0036920:CDS 55.0%
TGCTAACCCTTTCTTCGGCC+TGG - chr1_1:65769946-65769965 None:intergenic 55.0%
!! GTCACAAGATGATGGGGAGC+TGG + chr1_1:65770585-65770604 Msa0036920:CDS 55.0%
CGAAGCTTCAGTTCCTCGCA+AGG + chr1_1:65770833-65770852 Msa0036920:three_prime_UTR 55.0%
CTTTGCCCACATGAAGGGTG+CGG + chr1_1:65770954-65770973 Msa0036920:three_prime_UTR 55.0%
! GGGCTAGGACAGAGCATCTA+AGG + chr1_1:65771087-65771106 Msa0036920:three_prime_UTR 55.0%
AGGGCTGCGGTCTTTCTTTC+AGG + chr1_1:65771147-65771166 Msa0036920:three_prime_UTR 55.0%
!! TAGAGGGTGCTGCAGCATGT+TGG + chr1_1:65771406-65771425 Msa0036920:three_prime_UTR 55.0%
CGCGGGCCGTGTTTACTACA+AGG + chr1_1:65763174-65763193 Msa0036920:CDS 60.0%
CGCCGTACCCAAAACGCTTC+TGG - chr1_1:65763336-65763355 None:intergenic 60.0%
AGACGAGAACTGCGCACACC+AGG - chr1_1:65767055-65767074 None:intergenic 60.0%
GAAGTCCGTGTGAGAGGCTG+AGG + chr1_1:65770715-65770734 Msa0036920:three_prime_UTR 60.0%
CTTGGCCTCAGCCTCTCACA+CGG - chr1_1:65770723-65770742 None:intergenic 60.0%
CGAGGAACTGAAGCTTCGGC+AGG - chr1_1:65770831-65770850 None:intergenic 60.0%
CGCACCCTTCATGTGGGCAA+AGG - chr1_1:65770956-65770975 None:intergenic 60.0%
AGCAGGCACAGGCGGAAAAC+AGG + chr1_1:65771185-65771204 Msa0036920:three_prime_UTR 60.0%
! GGGTGCTGCAGCATGTTGGT+TGG + chr1_1:65771410-65771429 Msa0036920:three_prime_UTR 60.0%
!! GACGTGCCTGGTTCGGCGTT+TGG + chr1_1:65763437-65763456 Msa0036920:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 65762575 65771701 65762575 ID=Msa0036920;Name=Msa0036920
chr1_1 mRNA 65762575 65771701 65762575 ID=Msa0036920-mRNA-1;Parent=Msa0036920;Name=Msa0036920-mRNA-1;_AED=0.01;_eAED=0.01;_QI=301|1|1|1|1|1|7|987|1305
chr1_1 exon 65762575 65764028 65762575 ID=Msa0036920-mRNA-1:exon:21142;Parent=Msa0036920-mRNA-1
chr1_1 exon 65765242 65765320 65765242 ID=Msa0036920-mRNA-1:exon:21143;Parent=Msa0036920-mRNA-1
chr1_1 exon 65765488 65765555 65765488 ID=Msa0036920-mRNA-1:exon:21144;Parent=Msa0036920-mRNA-1
chr1_1 exon 65766404 65766554 65766404 ID=Msa0036920-mRNA-1:exon:21145;Parent=Msa0036920-mRNA-1
chr1_1 exon 65767033 65767571 65767033 ID=Msa0036920-mRNA-1:exon:21146;Parent=Msa0036920-mRNA-1
chr1_1 exon 65768276 65768467 65768276 ID=Msa0036920-mRNA-1:exon:21147;Parent=Msa0036920-mRNA-1
chr1_1 exon 65768979 65771701 65768979 ID=Msa0036920-mRNA-1:exon:21148;Parent=Msa0036920-mRNA-1
chr1_1 five_prime_UTR 65762575 65762875 65762575 ID=Msa0036920-mRNA-1:five_prime_utr;Parent=Msa0036920-mRNA-1
chr1_1 CDS 65762876 65764028 65762876 ID=Msa0036920-mRNA-1:cds;Parent=Msa0036920-mRNA-1
chr1_1 CDS 65765242 65765320 65765242 ID=Msa0036920-mRNA-1:cds;Parent=Msa0036920-mRNA-1
chr1_1 CDS 65765488 65765555 65765488 ID=Msa0036920-mRNA-1:cds;Parent=Msa0036920-mRNA-1
chr1_1 CDS 65766404 65766554 65766404 ID=Msa0036920-mRNA-1:cds;Parent=Msa0036920-mRNA-1
chr1_1 CDS 65767033 65767571 65767033 ID=Msa0036920-mRNA-1:cds;Parent=Msa0036920-mRNA-1
chr1_1 CDS 65768276 65768467 65768276 ID=Msa0036920-mRNA-1:cds;Parent=Msa0036920-mRNA-1
chr1_1 CDS 65768979 65770714 65768979 ID=Msa0036920-mRNA-1:cds;Parent=Msa0036920-mRNA-1
chr1_1 three_prime_UTR 65770715 65771701 65770715 ID=Msa0036920-mRNA-1:three_prime_utr;Parent=Msa0036920-mRNA-1
Gene Sequence

>Msa0036920

ATGGGTAATGCTGAAATCCCCAATTGGCTTGAAGGGTTGCCACTGGCACCTGAATTTCGACCAACTGATACTGAATTTTCCGACCCAATTGCTTATATCTCAAAGATTGAGCAGAAAGCTGGTAAATTTGGGATATGTAAGATTATCCCACCATTGCCCAAGCCTTCAAAAAAATATGTTTTTTCTAATTTGAATAAGTCCCTTTTGAAGCGGCCTGAATTGGGGCCAGATATTAGTTCTTTGGGTGCTGGTAATTCTTGGAAAACGGGTTCTGGGGATAGTAGTAATGATGGAGTGTCGCGGGCCGTGTTTACTACAAGGCAACAGGAAGTGGGACAAAATGTCAAAAAAACTAAAGGGGTTGTTCAGAAGTCAATGGCATGTGTCCATAAGCAAGTTTGGCAAAGTGGAGAAGTTTATACAATTGAACAGTTTGAGTCTAAATCGAAGACTTTTGCCAGAAGCGTTTTGGGTACGGCGAAGGATGTTTCTCCATTGGTTGTAGAGGCCATGTTTTGGAAGGCAGCTTCAGAGAAGCCTATTTATGTGGAGTATGCTAATGACGTGCCTGGTTCGGCGTTTGGAGAATCACAGGGTCAATTTTATCGTAGTCATCGAAGGCAACGGAAAAGGACTGATTATAAGAGTAGGGTAGATAGCTCTGTTTGTAAAGAAACTGAAATGGGTGGTGTAAATGATACACAAAATAATGAGTCTAAAGGCGTTCCTTCCCCAAGTCATGCAGAATCGTGTTTAGAGACGTCTAAATCAGCTATGACTTTGTCAACATCTACACCAAATGAGGCTTCACAGCCTTCTAAGGAGATGATTTCAGATGCTGACAATGATATGCAAGGCACTGCTGGTTGGAAGCTTTCAAATAGTCCTTGGAATCTGCAAGTTATTCCTCGTGCTTCAGGCTCACTAACACGTTTCATGCCAGATGATATTCCTGGTGTTACTTCACCCATGATATACATTGGTATGTTGTTTAGTTGGTTTGCCTGGCATGTAGAGGATCATGAACTTCACAGCTTGAATTTTCTTCACACTGGCTCATCAAAGACTTGGTACTCCGTTCCTGGAAATTATGCCTTTGCTTTTGAGGAAGTCATCCGCACAGAGGGTTATGGTGGTGATGTTGATCAATTAGCTGCTTTGAAACTTTTGGGCGAAAAAACTACTCTTTTATCACCTGAGGTAGTTGTTGCATCTGGGATTCCTTGCTGCAGGTTAGTACAGAATCCTGGTGAATTTGTTGTGACTTTTCCAAGAGCTTATCATGTAGGATTCAGCCACGGTTTTAACTGTGGGGAGGCTGCTAACTTTGGGACTCCACAATGGCTTGGCATAGCTAAAGAAGCTGCAGTGCGTAGAGCTACAATGAATCATCTTCCTATGCTCTCCCATCAGCAACTGCTTTACTTGCTGACCATGTCTTTTATTTCAAGTGTGCCAAGAACACTATTACCTGGTGTGCGCAGTTCTCGTCTGAGAGACCGTCAGAAAGAAGAAAGAGAGATTCTAGTAAAACAGGCTTTTATAGAAGATATGCTGCACGAAAACAAGCTGCTATCCATTCTTCTTGGAAAAGAAGCTACTAAAGAAGTTGTTTTATGGAATGTTGATTTACTACCAGATTCTGGCAAATATCGCCAGTTGTCTGATTTAGCTTCTACTTCTGGAACCTATATGGCGGACATGTCAAATGATAATATTAGTTCTGCTGATAAGAGTAGCCATTGTCTGCTCGATGAGATGAGTTTGTACATGGAGAATCTGACTGATTCAGATGTTGGCTATGATGATCTTCCATGTCACTTCCAAACTGATTCAGGAGCATTGGTTTGTGTGGGTTGTGGAATACTTGGTTTTCCATTTATGACATTAATACAACCAACTGAGAAATTGATAATGGAACTTCCTGATAATCATCTAGTTGAAGATTCCTCTCTGAACTCTGTTGGCTCCCTTCATAGTGCAGTCTCAAGGGATCTTTCTGTTTCTGAACTTGCTTCTGCAAAGGATTTGCCGGATCAGTCATTGAACGAGTGCAATAAATGTTGGAACACCTCCAGTACATTTTTGAAGCCACGGATTTTCTGCTTGGAGCATGCTGTTCAGGTTGTGGAGATGTTGCAGAGCAAAGGTGGAGCCAATGTGCTTATAATTTGCCATTCAGACTATCCGAAAATAAAGGCACATGCCAGGGCAGTTGCAGAAGAGATACAAAGTGCTTTTGATTATAACGAGGTTCCAATGGATATTGCATCCCCAGAAAATTTGGCTTTGATAGATCTGGCAATTGATGGTAAAGAACTTGATGAATGTGAAGATTGGACATCTAAACTAGGTCTTAATCTGCGGTTTTGTGTCAATAATATAAACAAATCTCCATGTAAACAAGTTCCTTTTACGCTAGCATTGGGGATGCAGTTCTATGATAAACGTCCTGGTTTATCTTTAAATTGGCATTCACAGAAAGCTCGATCTAAAAGGTCAAATCGTTTAGCTCAGTCTAAACCTGACAACATTCAGAGAATGAAGGATGATCAATTGCAGGAAAGAATTGATGGCTCCACTGCTGAAAAGAAACTGCTTCAATATTCAAGGAGAAAATTCAAGCCAAAGCAAAGTTGTTTCTCTGTAGCAAGCACGGTCTGTGAATCCCATGAGAAGTCCAAAAATGTGTCAGCTGTTTTGAGTGCGGAGCATTATAAATTTGTTTCTAAAGATGAGCTTGACACAGACAATTTCAGGAGTGATTGTGCATTGTCACGTGGCTCTGCTTCTGCTGCAATGACTCCATTGCATAATGAAATCCAGAATGCTGAAGCTCCCACTAGTATGAGTTTGAATACTAGTGTCTCGGAAAAATGCAGCATAGAGAACCAGGATTGTCAGAACAATAAATATTCTGGCTCACTTACAAATGGAATAGACAAAAATGTCGATGTGTTTGGAAACAACCAAATTACTGAAGCCATTGGTAGCAAGTGTGATAACTTAGATTTAGATGGTGAAGGGTATCAAGAACATCAGTCTGCATGCAAAAGCAACAGTGAAGCTGTTTTATCTACTGCTTCATTGGTAAACCAAACTGCTCTCGCTACTGTGGATGGAAGTTTTGAAAGTCCAATTAATAACCAGGCCGAAGAAAGGGTTAGCAATTCTATGTCATTGAAAGAGACAACTGAGGGAGAAAGTAAGTCTTTGACTGAAATGGACGAGGAACCTCTAAATGATGATAAAGAAATGAGTGAACATGCTCCTACTGCAGACGTTTGTGAAGTTCCAAGAGAGCTTTATGCTTCTGCAAACTTCCATAATACAGTAAACTTGGATGCTGAGATGCAGCAAGAACGACAAGTTGGAGAAAGTGGCGAACAGGAAATAATTCAGTCCACTCATATTTCCACAAAACAATTGTGTGAATCTACAAGTGGGGAATATGCAGAGGGATTGCACGATGAAGTGATTTTGGAGTCTTCAAAGCAGAGTCTGGTCCAAAACGAGAATATAACTAATGAGGAACATGTATCTAGTTATGTTGCAAAAGGCGACAATAGAAGTATAACCATATCAGAAATAGGATGTTCTGAAGTTTCAGCAGAAACCTGTCCCAAAGAAGACTCATGTATTCAATTTGTTTCGAATACTGAAAAGAAAATGGAAATCCAACCCATTACTAGAGTTGATGAGGAACTCTCTACATCAATCCAGGAATGTTCTCAAACCGAGAAAAAGACGGGTGGCAGAGAAAATGTAAATGGAAGTGAAGTTGATTTGTCACAAGATGATGGGGAGCTGGAAAGCTGTGAGTTGACTACAGAAGTTCCCAGATCAAATGCTGGGAAGAAAAAAAGAGGAAAATGGAAGACACGGAAAAAAACCAATTTGATTGCTATGACTTTATAA
Protein sequence

>Msa0036920

MGNAEIPNWLEGLPLAPEFRPTDTEFSDPIAYISKIEQKAGKFGICKIIPPLPKPSKKYVFSNLNKSLLKRPELGPDISSLGAGNSWKTGSGDSSNDGVSRAVFTTRQQEVGQNVKKTKGVVQKSMACVHKQVWQSGEVYTIEQFESKSKTFARSVLGTAKDVSPLVVEAMFWKAASEKPIYVEYANDVPGSAFGESQGQFYRSHRRQRKRTDYKSRVDSSVCKETEMGGVNDTQNNESKGVPSPSHAESCLETSKSAMTLSTSTPNEASQPSKEMISDADNDMQGTAGWKLSNSPWNLQVIPRASGSLTRFMPDDIPGVTSPMIYIGMLFSWFAWHVEDHELHSLNFLHTGSSKTWYSVPGNYAFAFEEVIRTEGYGGDVDQLAALKLLGEKTTLLSPEVVVASGIPCCRLVQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLGIAKEAAVRRATMNHLPMLSHQQLLYLLTMSFISSVPRTLLPGVRSSRLRDRQKEEREILVKQAFIEDMLHENKLLSILLGKEATKEVVLWNVDLLPDSGKYRQLSDLASTSGTYMADMSNDNISSADKSSHCLLDEMSLYMENLTDSDVGYDDLPCHFQTDSGALVCVGCGILGFPFMTLIQPTEKLIMELPDNHLVEDSSLNSVGSLHSAVSRDLSVSELASAKDLPDQSLNECNKCWNTSSTFLKPRIFCLEHAVQVVEMLQSKGGANVLIICHSDYPKIKAHARAVAEEIQSAFDYNEVPMDIASPENLALIDLAIDGKELDECEDWTSKLGLNLRFCVNNINKSPCKQVPFTLALGMQFYDKRPGLSLNWHSQKARSKRSNRLAQSKPDNIQRMKDDQLQERIDGSTAEKKLLQYSRRKFKPKQSCFSVASTVCESHEKSKNVSAVLSAEHYKFVSKDELDTDNFRSDCALSRGSASAAMTPLHNEIQNAEAPTSMSLNTSVSEKCSIENQDCQNNKYSGSLTNGIDKNVDVFGNNQITEAIGSKCDNLDLDGEGYQEHQSACKSNSEAVLSTASLVNQTALATVDGSFESPINNQAEERVSNSMSLKETTEGESKSLTEMDEEPLNDDKEMSEHAPTADVCEVPRELYASANFHNTVNLDAEMQQERQVGESGEQEIIQSTHISTKQLCESTSGEYAEGLHDEVILESSKQSLVQNENITNEEHVSSYVAKGDNRSITISEIGCSEVSAETCPKEDSCIQFVSNTEKKMEIQPITRVDEELSTSIQECSQTEKKTGGRENVNGSEVDLSQDDGELESCELTTEVPRSNAGKKKRGKWKTRKKTNLIAMTL*