AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0545210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0545210 MtrunA17_Chr4g0025871 87.673 722 62 3 1 721 1 696 0.0 1275
Msa0545210 MtrunA17_Chr1g0156381 44.599 861 345 16 1 745 1 845 0.0 684
Msa0545210 MtrunA17_Chr4g0030651 45.721 853 335 16 1 747 1 831 0.0 682
Msa0545210 MtrunA17_Chr7g0240901 45.000 860 343 17 1 750 1 840 0.0 670
Msa0545210 MtrunA17_Chr1g0191031 46.275 698 257 11 1 654 1 624 0.0 595
Msa0545210 MtrunA17_Chr7g0273801 42.875 807 309 20 1 733 1 729 0.0 577
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0545210 AT1G75660.1 46.429 840 325 16 1 733 1 822 0.0 658
Msa0545210 AT5G42540.1 45.476 840 327 16 1 733 1 816 0.0 642
Msa0545210 AT5G42540.2 45.059 850 327 16 1 733 1 827 0.0 640
Msa0545210 AT1G54490.1 43.154 818 316 14 1 747 1 740 0.0 613
Msa0545210 AT1G54490.2 43.164 746 296 12 56 747 11 682 0.0 557

Find 169 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACACGAATTTCATCGTATT+TGG 0.150872 4_1:-35154937 None:intergenic
TCCATTTGCTTCGGACTTAA+AGG 0.176185 4_1:+35157944 Msa0545210:CDS
AACACGGTTCACTGTTTATA+TGG 0.203040 4_1:+35155485 Msa0545210:CDS
AGTCAGCATTATAATCGTTT+TGG 0.237014 4_1:+35159336 Msa0545210:CDS
GCTCCTTTGTGAATTGATTC+TGG 0.243447 4_1:-35159692 None:intergenic
ATCTTCATTTGTTTCTTTGC+TGG 0.261003 4_1:+35156260 Msa0545210:CDS
ATGTCTACTTCTTTATCTTT+AGG 0.267369 4_1:-35153331 None:intergenic
CCACCAACATTGAGCTAAAA+AGG 0.271417 4_1:+35157387 Msa0545210:CDS
GGTGGTTGAAATGATCATTT+TGG 0.281916 4_1:+35160116 Msa0545210:three_prime_UTR
TCTGCCTTACATGCCATCTT+TGG 0.301645 4_1:+35156292 Msa0545210:CDS
GCCTCGCAAGCTATTGTATA+TGG 0.302733 4_1:+35154052 Msa0545210:CDS
GCTGGTATTGGATGGGGTTC+AGG 0.308029 4_1:+35159713 Msa0545210:CDS
CCACCAAAACTAGTTGAGTT+AGG 0.311068 4_1:-35159644 None:intergenic
AAACACTCAACAAAATAAAA+AGG 0.316848 4_1:-35160025 None:intergenic
TTATCTGATGCTAATGTTCC+TGG 0.318479 4_1:+35155398 Msa0545210:CDS
ATCAATTGTGCATAGGCTTT+AGG 0.320131 4_1:-35158163 None:intergenic
GGGTGCAATTGATTTACTTA+TGG 0.326288 4_1:+35156414 Msa0545210:intron
GAAAAGTTAGTATATTTATA+AGG 0.327905 4_1:+35153056 Msa0545210:five_prime_UTR
TTACTGAACAATATTGCTTT+TGG 0.330022 4_1:+35160095 Msa0545210:three_prime_UTR
GGATATCCTCTGATCCATTA+TGG 0.339612 4_1:+35155223 Msa0545210:CDS
TTGTTGTTGCTATCATCATT+AGG 0.343938 4_1:-35153861 None:intergenic
CGAATTCCAACAGCTCATTT+AGG 0.348865 4_1:+35159930 Msa0545210:CDS
GACACTTCACATTCTTGTTT+AGG 0.353004 4_1:-35155123 None:intergenic
CATTTGAAGTGTTTGTGTTA+AGG 0.354839 4_1:-35153782 None:intergenic
TGTATGCAAACTTCCATATA+TGG 0.356068 4_1:+35158486 Msa0545210:CDS
CAACGTTCGCATGTGCCTTT+TGG 0.361980 4_1:+35159845 Msa0545210:CDS
TTGAACCGCATTGGAGCATT+TGG 0.362324 4_1:-35156050 None:intergenic
GAAATTCAGTTGAAGTTGAT+AGG 0.363011 4_1:+35158663 Msa0545210:CDS
TTAATGTCTTCAAACACCTT+TGG 0.379530 4_1:-35153759 None:intergenic
CATGTTCGGCACCTCTTATC+TGG 0.384581 4_1:+35159086 Msa0545210:CDS
ACCATAACACCCTTCCATAA+TGG 0.385087 4_1:-35155237 None:intergenic
CCATTTGCTTCGGACTTAAA+GGG 0.386749 4_1:+35157945 Msa0545210:CDS
TGAGAGGTTGAGAGTGATGA+AGG 0.387822 4_1:-35153559 None:intergenic
TAAGATCCTCCATGATCATT+AGG 0.398845 4_1:-35159812 None:intergenic
TCAAGAGTTATATTTCTTCA+AGG 0.402191 4_1:+35155202 Msa0545210:CDS
ACTTCTTTATCTTTAGGTAG+TGG 0.412051 4_1:-35153325 None:intergenic
AAGCTATTGTATATGGCTAT+TGG 0.413300 4_1:+35154059 Msa0545210:CDS
ATTGGGTTGTATAGCTGTTA+TGG 0.413374 4_1:+35160140 Msa0545210:three_prime_UTR
TGAGATAGAAATGAAGATAC+AGG 0.417312 4_1:+35156187 Msa0545210:CDS
CACCAAAACTAGTTGAGTTA+GGG 0.419048 4_1:-35159643 None:intergenic
TAAACCGTCTAGTCCTTTGC+TGG 0.424583 4_1:-35154908 None:intergenic
CTTCCTCAGTCTCTCTTCCT+CGG 0.425369 4_1:-35155070 None:intergenic
TAGATAAAATTAGGAACTGT+TGG 0.427627 4_1:+35157320 Msa0545210:intron
ACTGAGGAAGGAATTTGAAA+TGG 0.428253 4_1:+35155083 Msa0545210:CDS
TCCATTATGGAAGGGTGTTA+TGG 0.432134 4_1:+35155236 Msa0545210:CDS
TTGTAGGGATTAAAAGTTGA+AGG 0.433623 4_1:+35153011 None:intergenic
TGCTCCTTCAACAACATTTG+TGG 0.434639 4_1:+35153977 Msa0545210:CDS
GGTTCACTGTTTATATGGAT+TGG 0.435103 4_1:+35155490 Msa0545210:CDS
CATAAACAACCTAATGATCA+TGG 0.436115 4_1:+35159803 Msa0545210:CDS
ATTCACAAAGGAGCTGGTAT+TGG 0.439239 4_1:+35159701 Msa0545210:CDS
ATTGGATGGGGTTCAGGTAG+AGG 0.441242 4_1:+35159719 Msa0545210:CDS
TTTAGGTAGTGGAGTAAGAA+AGG 0.442439 4_1:-35153314 None:intergenic
AAATGCTCCAATGCGGTTCA+AGG 0.452840 4_1:+35156052 Msa0545210:CDS
CCCTTTAAGTCCGAAGCAAA+TGG 0.454665 4_1:-35157945 None:intergenic
AGTTGAAGTTGATAGGTTGT+TGG 0.457586 4_1:+35158670 Msa0545210:CDS
CCACTATGGTCCATTTGCTT+CGG 0.459238 4_1:+35157935 Msa0545210:CDS
TGGTGTAAACCTTCCAGAAA+AGG 0.459319 4_1:+35159106 Msa0545210:CDS
TCATTAGGTTGTTTATGAAA+AGG 0.459890 4_1:-35159797 None:intergenic
TTTGCATATTTGGTTGTTGA+GGG 0.461938 4_1:+35156157 Msa0545210:CDS
TATAAACAGTGAACCGTGTT+CGG 0.463074 4_1:-35155482 None:intergenic
AGTTGATCAAAAGGTAAGAA+TGG 0.463553 4_1:-35158005 None:intergenic
ACCGTGTTCGGATCATAATC+AGG 0.465301 4_1:-35155470 None:intergenic
ACACTTAAAAGTTGATCAAA+AGG 0.465449 4_1:-35158014 None:intergenic
AAGGTAAAAGTGAAAACAGT+TGG 0.478051 4_1:+35160061 Msa0545210:intron
ACTTCCACAAATGTTGTTGA+AGG 0.478416 4_1:-35153981 None:intergenic
TAAGTGTTCTCCCTCAAAAG+AGG 0.480997 4_1:+35158030 Msa0545210:CDS
ATAAAATTATGTCATTCATA+AGG 0.481208 4_1:+35155432 Msa0545210:CDS
TAATCCATTCTTGAGTTCGC+TGG 0.481878 4_1:-35158533 None:intergenic
AATTAAACCTTGAACCGCAT+TGG 0.483273 4_1:-35156059 None:intergenic
ATATCCAAAGATGGCATGTA+AGG 0.484608 4_1:-35156296 None:intergenic
CAGGAGTTGCTTCATGGACA+TGG 0.488947 4_1:+35157659 Msa0545210:CDS
ACAGCTCATTTAGGCCTCAA+TGG 0.490917 4_1:+35159939 Msa0545210:CDS
GGCAGCTTCTCATTATAGTC+AGG 0.502417 4_1:-35156026 None:intergenic
TGCTTCGGACTTAAAGGGCA+TGG 0.502737 4_1:+35157950 Msa0545210:CDS
CAAAGGAGCTGGTATTGGAT+GGG 0.513467 4_1:+35159706 Msa0545210:CDS
AGGAAAGCGCTTCATGTGGC+AGG 0.513892 4_1:+35158326 Msa0545210:CDS
GATGCTGATCTTATAATGCT+TGG 0.516302 4_1:+35155600 Msa0545210:CDS
TGTTGCTATCATCATTAGGA+TGG 0.516700 4_1:-35153857 None:intergenic
ATTGAGTGGCAGTTTAGAAA+TGG 0.517881 4_1:-35153493 None:intergenic
TTTAGCAGCGACGGCATTGG+AGG 0.518763 4_1:+35158885 Msa0545210:intron
AGCAAATGCATAAAAGAGAA+AGG 0.519730 4_1:+35157101 Msa0545210:CDS
ATGCTAATGTTCCTGGAGAA+GGG 0.520161 4_1:+35155405 Msa0545210:CDS
TTGAGGCCTAAATGAGCTGT+TGG 0.520881 4_1:-35159936 None:intergenic
TGCTGCATGAATTCTGTCCC+TGG 0.521072 4_1:-35155165 None:intergenic
GAAACCAGCGAACTCAAGAA+TGG 0.521588 4_1:+35158529 Msa0545210:CDS
GATGCTAATGTTCCTGGAGA+AGG 0.521838 4_1:+35155404 Msa0545210:CDS
ACCTCGTGAATATCCAAAGA+TGG 0.523973 4_1:-35156305 None:intergenic
GTCAAATACGAGCATCCTGC+TGG 0.524098 4_1:+35159053 Msa0545210:CDS
AGCCTATGCACAATTGATGT+TGG 0.525564 4_1:+35158168 Msa0545210:CDS
TCCTTTGAATCACTCCATTG+AGG 0.527231 4_1:-35159953 None:intergenic
TTGGATGGGGTTCAGGTAGA+GGG 0.528433 4_1:+35159720 Msa0545210:CDS
ACAAAGGAGCTGGTATTGGA+TGG 0.528593 4_1:+35159705 Msa0545210:CDS
AACCGCATTGGAGCATTTGG+TGG 0.529158 4_1:-35156047 None:intergenic
GAGAGGTTGAGAGTGATGAA+GGG 0.529164 4_1:-35153558 None:intergenic
ACAAGGTGGACACAAGCATA+AGG 0.533115 4_1:+35158741 Msa0545210:CDS
AAAGGCGACTTGTTTAAAAG+TGG 0.535755 4_1:+35157119 Msa0545210:CDS
AGAAATGGTGAGAAGCATAA+TGG 0.536168 4_1:-35153478 None:intergenic
CTACCTCGTCCTCTACCAAA+AGG 0.537396 4_1:-35159860 None:intergenic
GAAGGTTTACACCAGATAAG+AGG 0.537906 4_1:-35159097 None:intergenic
GTACACTGAAGGATTGTTGT+GGG 0.539897 4_1:+35157618 Msa0545210:CDS
GAATCAATTCACAAAGGAGC+TGG 0.539955 4_1:+35159695 Msa0545210:CDS
ACAGAATGCATGTGATTACA+TGG 0.542418 4_1:+35156856 Msa0545210:CDS
CTGGTGGTACAAGTCATGTT+CGG 0.544677 4_1:+35159072 Msa0545210:CDS
CATAATGGTCTATGAGATGA+TGG 0.545951 4_1:-35153463 None:intergenic
AGGAAGGAATTTGAAATGGA+AGG 0.549315 4_1:+35155087 Msa0545210:CDS
ACCAAAACTAGTTGAGTTAG+GGG 0.549416 4_1:-35159642 None:intergenic
ATCCTCTGATCCATTATGGA+AGG 0.552359 4_1:+35155227 Msa0545210:CDS
ACTTCGTCTTTGATCTTGAG+CGG 0.552614 4_1:+35156222 Msa0545210:CDS
GATAAAAGTCGTTGGTAACA+TGG 0.555757 4_1:+35159974 Msa0545210:exon
GCCTCAATGGAGTGATTCAA+AGG 0.557141 4_1:+35159952 Msa0545210:CDS
TAACACAAACACTTCAAATG+TGG 0.557233 4_1:+35153785 Msa0545210:CDS
AGGTAGTGGAGTAAGAAAGG+AGG 0.560776 4_1:-35153311 None:intergenic
ATTCGAACAATGTGTATGCA+TGG 0.563839 4_1:+35159894 Msa0545210:CDS
CTATTGAGAAGTTGTGATCA+TGG 0.566092 4_1:+35153698 Msa0545210:exon
ACATGACTTGTACCACCAGC+AGG 0.569156 4_1:-35159068 None:intergenic
CTCACTTAAATTAAACAAGG+TGG 0.569573 4_1:+35158727 Msa0545210:CDS
CAGGTAGAGGGAAATCAGAA+AGG 0.576545 4_1:+35159732 Msa0545210:CDS
AAAGGAGCTGGTATTGGATG+GGG 0.579160 4_1:+35159707 Msa0545210:CDS
CCTTTGTGAATTGATTCTGG+AGG 0.581542 4_1:-35159689 None:intergenic
TGCTAATGTTCCTGGAGAAG+GGG 0.588627 4_1:+35155406 Msa0545210:CDS
GCCATATACAATAGCTTGCG+AGG 0.591780 4_1:-35154053 None:intergenic
ATTCAAAGGATAAAAGTCGT+TGG 0.593054 4_1:+35159966 Msa0545210:CDS
AGACTGAGGACAAACATTGT+CGG 0.594878 4_1:-35156936 None:intergenic
GGTCAAATAATCAAGACACT+TGG 0.597825 4_1:+35159582 Msa0545210:intron
GATTCAAATATTATAACACC+AGG 0.602504 4_1:+35155147 Msa0545210:CDS
GTTGATAGGTTGTTGGTCAG+CGG 0.602504 4_1:+35158677 Msa0545210:CDS
AGTACACTGAAGGATTGTTG+TGG 0.604142 4_1:+35157617 Msa0545210:CDS
TTAGCAGCGACGGCATTGGA+GGG 0.605881 4_1:+35158886 Msa0545210:intron
GCAAATGGACCATAGTGGTA+GGG 0.606211 4_1:-35157930 None:intergenic
TGTTGTTCTCAACACACTCG+TGG 0.606281 4_1:-35158923 None:intergenic
TCCTCTGATCCATTATGGAA+GGG 0.606739 4_1:+35155228 Msa0545210:CDS
GGTCTATGAGATGATGGTGA+AGG 0.608597 4_1:-35153457 None:intergenic
TAAACTTGGAGAATATCTTG+TGG 0.609289 4_1:+35156459 Msa0545210:CDS
ATTCATGCAGCAACTTTCGA+AGG 0.609533 4_1:+35155176 Msa0545210:CDS
CGAGGAAGAGAGACTGAGGA+AGG 0.609831 4_1:+35155071 Msa0545210:CDS
ATCCAACATCAATTGTGCAT+AGG 0.611572 4_1:-35158170 None:intergenic
GAGCGAAAATGAACCAGCAA+AGG 0.612334 4_1:+35154895 Msa0545210:CDS
ACATAAATGAGACGATATTG+TGG 0.612573 4_1:+35159304 Msa0545210:CDS
ACCCTTCCATAATGGATCAG+AGG 0.615223 4_1:-35155229 None:intergenic
TGGATGAATTCAAACAGAGA+AGG 0.615569 4_1:+35159602 Msa0545210:CDS
TTGCTCACTTAAATTAAACA+AGG 0.615653 4_1:+35158724 Msa0545210:CDS
AGCAAATGGACCATAGTGGT+AGG 0.618914 4_1:-35157931 None:intergenic
TATTGAGAAGTTGTGATCAT+GGG 0.620510 4_1:+35153699 Msa0545210:exon
CCGAAGCAAATGGACCATAG+TGG 0.629001 4_1:-35157935 None:intergenic
TCCTGATTATGATCCGAACA+CGG 0.629375 4_1:+35155469 Msa0545210:CDS
GTTACTCAACAAATATCCAA+AGG 0.635055 4_1:+35153743 Msa0545210:CDS
TGAACCAGCAAAGGACTAGA+CGG 0.636674 4_1:+35154904 Msa0545210:CDS
TGGAGATTTCTTGACTGACA+AGG 0.644849 4_1:+35157139 Msa0545210:CDS
GTCTATGAGATGATGGTGAA+GGG 0.645995 4_1:-35153456 None:intergenic
CACTTGTAAAAGAAGATGAG+AGG 0.651190 4_1:-35153575 None:intergenic
TAGGTTCAGAAGTACACTGA+AGG 0.653526 4_1:+35157607 Msa0545210:intron
TCATCATTAGGATGGAAACA+AGG 0.654793 4_1:-35153849 None:intergenic
AGTAACCATCTATAAAACGA+TGG 0.659634 4_1:-35153726 None:intergenic
TTTGTATTTATAGGAAGCCG+AGG 0.659675 4_1:+35155053 Msa0545210:intron
TGACTGAGATTGAGATTGAG+TGG 0.660234 4_1:-35153507 None:intergenic
ATATCTTGTGGACATAAACA+AGG 0.669996 4_1:+35156471 Msa0545210:CDS
TAGAAGGAAAGCGCTTCATG+TGG 0.670368 4_1:+35158322 Msa0545210:CDS
AAATACGAGCATCCTGCTGG+TGG 0.671206 4_1:+35159056 Msa0545210:CDS
AAGCCGAGGAAGAGAGACTG+AGG 0.671391 4_1:+35155067 Msa0545210:CDS
CTTACTTCTTCATCAGACTG+AGG 0.677507 4_1:-35156950 None:intergenic
GCCATCTTTGGATATTCACG+AGG 0.678827 4_1:+35156304 Msa0545210:CDS
AAACAGTTAGGGGAGAAACA+TGG 0.682040 4_1:+35156609 Msa0545210:intron
CCAAAACTAGTTGAGTTAGG+GGG 0.684296 4_1:-35159641 None:intergenic
CAAAAGGCACATGCGAACGT+TGG 0.684654 4_1:-35159844 None:intergenic
CCTCCAGAATCAATTCACAA+AGG 0.701480 4_1:+35159689 Msa0545210:CDS
ATTCAAATATTATAACACCA+GGG 0.720952 4_1:+35155148 Msa0545210:CDS
TGCCACCAAATGCTCCAATG+CGG 0.723491 4_1:+35156045 Msa0545210:CDS
AAACAACCTAATGATCATGG+AGG 0.725320 4_1:+35159806 Msa0545210:CDS
TCATTCATAAGGAAACAGCG+TGG 0.793260 4_1:+35155443 Msa0545210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CCTTAATTAATTTTTTTTAT+CGG - chr4_1:35153194-35153213 None:intergenic 10.0%
!! CGATAAAAAAAATTAATTAA+GGG + chr4_1:35153192-35153211 Msa0545210:five_prime_UTR 10.0%
!! ATCATAAAATAATAAGTAAA+AGG - chr4_1:35154103-35154122 None:intergenic 10.0%
!!! ATATTGTTTTTTGTATTTAT+AGG + chr4_1:35155044-35155063 Msa0545210:intron 10.0%
!! TATTGATGAATAATTAAATA+CGG - chr4_1:35155678-35155697 None:intergenic 10.0%
!! AAATCAAATAATATTTATCA+TGG - chr4_1:35158117-35158136 None:intergenic 10.0%
!!! ATTAATGATATTTCTTATTT+AGG + chr4_1:35158462-35158481 Msa0545210:intron 10.0%
!!! TTAATGATATTTCTTATTTA+GGG + chr4_1:35158463-35158482 Msa0545210:intron 10.0%
!! GAAAAGTTAGTATATTTATA+AGG + chr4_1:35153056-35153075 Msa0545210:five_prime_UTR 15.0%
!!! AACTGACTTTTTATTAATTA+TGG + chr4_1:35153161-35153180 Msa0545210:five_prime_UTR 15.0%
!!! ACTGACTTTTTATTAATTAT+GGG + chr4_1:35153162-35153181 Msa0545210:five_prime_UTR 15.0%
!!! ATTAATTTTTTTTATCGGTT+TGG - chr4_1:35153189-35153208 None:intergenic 15.0%
!! CCGATAAAAAAAATTAATTA+AGG + chr4_1:35153191-35153210 Msa0545210:five_prime_UTR 15.0%
!! ATAAAATAATAAGTAAAAGG+TGG - chr4_1:35154100-35154119 None:intergenic 15.0%
!!! TATTTTCATTTGTTTCAAAT+AGG - chr4_1:35154972-35154991 None:intergenic 15.0%
!!! TATTTCATTGTTGATTAATT+TGG + chr4_1:35155350-35155369 Msa0545210:intron 15.0%
!! ATAAAATTATGTCATTCATA+AGG + chr4_1:35155432-35155451 Msa0545210:CDS 15.0%
!!! TATTTACAAACATTTTAGTT+AGG + chr4_1:35156327-35156346 Msa0545210:intron 15.0%
!!! CTAATTTTATCTAAAAAGAA+TGG - chr4_1:35157313-35157332 None:intergenic 15.0%
!!! CATTCTTTTTAGATAAAATT+AGG + chr4_1:35157311-35157330 Msa0545210:intron 15.0%
!!! TTTTGCATAATATTATCATT+CGG + chr4_1:35157554-35157573 Msa0545210:intron 15.0%
!!! GATGTTTTAAAAAAATGAAT+CGG + chr4_1:35157697-35157716 Msa0545210:intron 15.0%
!! TGATGTTTAAAAAAAATTGT+GGG - chr4_1:35158577-35158596 None:intergenic 15.0%
!! ATGATGTTTAAAAAAAATTG+TGG - chr4_1:35158578-35158597 None:intergenic 15.0%
!! AAACATAGTTGAAAATTTAA+AGG - chr4_1:35158622-35158641 None:intergenic 15.0%
!!! TTGTTATTTTATTTAGCATT+TGG + chr4_1:35158991-35159010 Msa0545210:intron 15.0%
!!! TACATTTTAATATTGCTTTA+TGG + chr4_1:35159021-35159040 Msa0545210:intron 15.0%
!!! ATTCAATTTTGTAATAATCT+TGG + chr4_1:35159538-35159557 Msa0545210:intron 15.0%
!!! AAAAGGGTTAAATATGTTTT+TGG - chr4_1:35153083-35153102 None:intergenic 20.0%
!!! TGATTTAGTTTTTCTTTACT+AGG + chr4_1:35154119-35154138 Msa0545210:intron 20.0%
!!! AGTAGTTTACTTGTATTTTT+AGG - chr4_1:35154310-35154329 None:intergenic 20.0%
!!! CTATTTTCTTTAAGTAATCT+GGG - chr4_1:35154657-35154676 None:intergenic 20.0%
!!! AAACTTGTATTGTTTTCTAT+AGG - chr4_1:35154691-35154710 None:intergenic 20.0%
!! ATTCAAATATTATAACACCA+GGG + chr4_1:35155148-35155167 Msa0545210:CDS 20.0%
!! TCAACAAAAAAACTAAGATT+TGG - chr4_1:35155518-35155537 None:intergenic 20.0%
!! TCTCTTAAAATTGAAAAATG+AGG - chr4_1:35155642-35155661 None:intergenic 20.0%
!!! TCATTTTTCAATTTTAAGAG+AGG + chr4_1:35155641-35155660 Msa0545210:CDS 20.0%
!!! AATTTTAAGAGAGGTTATTT+TGG + chr4_1:35155650-35155669 Msa0545210:intron 20.0%
!! TTTCAAATAGGCATTTATTT+AGG - chr4_1:35155819-35155838 None:intergenic 20.0%
!! AAAAAAGAGTTCAATAAACT+TGG + chr4_1:35156445-35156464 Msa0545210:CDS 20.0%
!! AGAAAAATAAATAAGGGATT+AGG - chr4_1:35156518-35156537 None:intergenic 20.0%
!! AGTTGAAAAATTCATTCTTA+TGG + chr4_1:35156653-35156672 Msa0545210:CDS 20.0%
!! AAACTAAGAACAAATGTAAA+AGG - chr4_1:35157186-35157205 None:intergenic 20.0%
!!! TGTTTTTGTTATCTGATAAA+TGG + chr4_1:35157218-35157237 Msa0545210:intron 20.0%
!! ATAATATTATGCAAAACACA+AGG - chr4_1:35157550-35157569 None:intergenic 20.0%
!!! GATTTTGAAATTGATATAGA+AGG + chr4_1:35158306-35158325 Msa0545210:intron 20.0%
!!! AATTTTCAACTATGTTTTGT+AGG + chr4_1:35158625-35158644 Msa0545210:intron 20.0%
!! AGAAAACATAAGACAAAAAA+AGG - chr4_1:35158858-35158877 None:intergenic 20.0%
!! AAACACTCAACAAAATAAAA+AGG - chr4_1:35160028-35160047 None:intergenic 20.0%
!!! GTGTTTTTTGTTAATTGATA+AGG + chr4_1:35160042-35160061 Msa0545210:intron 20.0%
!!! AAGTTGAAGGAAATTTTTTG+AGG + chr4_1:35153024-35153043 Msa0545210:five_prime_UTR 25.0%
!!! AGTTGAAGGAAATTTTTTGA+GGG + chr4_1:35153025-35153044 Msa0545210:five_prime_UTR 25.0%
! CCGTTAGGTTTAATAAAAAA+GGG - chr4_1:35153099-35153118 None:intergenic 25.0%
!!! CCCTTTTTTATTAAACCTAA+CGG + chr4_1:35153096-35153115 Msa0545210:five_prime_UTR 25.0%
! TCCGTTAGGTTTAATAAAAA+AGG - chr4_1:35153100-35153119 None:intergenic 25.0%
!! TTTTTATTAAACCTAACGGA+AGG + chr4_1:35153100-35153119 Msa0545210:five_prime_UTR 25.0%
!! TTTTATTAAACCTAACGGAA+GGG + chr4_1:35153101-35153120 Msa0545210:five_prime_UTR 25.0%
! ATGTCTACTTCTTTATCTTT+AGG - chr4_1:35153334-35153353 None:intergenic 25.0%
! TGAAGTGTGTATTAGAAAAA+AGG - chr4_1:35153606-35153625 None:intergenic 25.0%
! TAGGTTACATAATGTTAAGA+GGG + chr4_1:35154138-35154157 Msa0545210:intron 25.0%
!!! GAATACATTGTTGCTTTTTT+GGG - chr4_1:35154189-35154208 None:intergenic 25.0%
!!! TGAATACATTGTTGCTTTTT+TGG - chr4_1:35154190-35154209 None:intergenic 25.0%
!! TGTTAGTAATATGGTCTTTT+CGG + chr4_1:35154500-35154519 Msa0545210:intron 25.0%
!! ACTTATTTGAGTTTATGTGT+TGG + chr4_1:35154527-35154546 Msa0545210:intron 25.0%
!!! CAACTTATGACATGTTTTTA+AGG + chr4_1:35154590-35154609 Msa0545210:intron 25.0%
!!! GCTATTTTCTTTAAGTAATC+TGG - chr4_1:35154658-35154677 None:intergenic 25.0%
!! TTGTATTGTTTTCTATAGGA+TGG - chr4_1:35154687-35154706 None:intergenic 25.0%
!! ATTAAGTCTTTTATCCAAAC+AGG + chr4_1:35154785-35154804 Msa0545210:intron 25.0%
! AAGCAAATGTATAACATTAG+GGG - chr4_1:35154811-35154830 None:intergenic 25.0%
! CAAGCAAATGTATAACATTA+GGG - chr4_1:35154812-35154831 None:intergenic 25.0%
! ACAAGCAAATGTATAACATT+AGG - chr4_1:35154813-35154832 None:intergenic 25.0%
! CAATATGAAAAACATTTCCT+TGG - chr4_1:35154855-35154874 None:intergenic 25.0%
! ATAAAACAGTTGAATGATTC+AGG + chr4_1:35155001-35155020 Msa0545210:intron 25.0%
! GATTCAAATATTATAACACC+AGG + chr4_1:35155147-35155166 Msa0545210:CDS 25.0%
! TCAAGAGTTATATTTCTTCA+AGG + chr4_1:35155202-35155221 Msa0545210:CDS 25.0%
!!! TGGTTAATGTTTTTTGACTT+AGG + chr4_1:35155370-35155389 Msa0545210:intron 25.0%
! TCAAACATTTCAAATATCAG+AGG - chr4_1:35155553-35155572 None:intergenic 25.0%
!!! TGAGATGAAACCTTTTATTT+TGG + chr4_1:35155570-35155589 Msa0545210:intron 25.0%
! AAATTGAAAAATGAGGTTCA+TGG - chr4_1:35155635-35155654 None:intergenic 25.0%
! ATGCTTCATAGATTTCAAAT+AGG - chr4_1:35155831-35155850 None:intergenic 25.0%
!! TCATTTTGTTAAATTTGCGT+CGG - chr4_1:35155872-35155891 None:intergenic 25.0%
! ACCATTATATGAAAACAGTT+AGG + chr4_1:35156597-35156616 Msa0545210:intron 25.0%
! CCATTATATGAAAACAGTTA+GGG + chr4_1:35156598-35156617 Msa0545210:intron 25.0%
! CATTATATGAAAACAGTTAG+GGG + chr4_1:35156599-35156618 Msa0545210:intron 25.0%
! GAAAAATTCATTCTTATGGT+TGG + chr4_1:35156657-35156676 Msa0545210:CDS 25.0%
!! ATGGATTAATTATGCATTCA+TGG + chr4_1:35156793-35156812 Msa0545210:intron 25.0%
! TAGATAAAATTAGGAACTGT+TGG + chr4_1:35157320-35157339 Msa0545210:intron 25.0%
!! TTATAAAGAGAAGTTTTCTG+TGG + chr4_1:35157358-35157377 Msa0545210:CDS 25.0%
!!! GTTTTTTTCTTTTTCCTTCT+CGG + chr4_1:35157455-35157474 Msa0545210:intron 25.0%
! ATAATATTATCATTCGGTAG+TGG + chr4_1:35157560-35157579 Msa0545210:intron 25.0%
! AAATGAATCGGATATCAATT+AGG + chr4_1:35157709-35157728 Msa0545210:intron 25.0%
! AAATAATCACTGCAAAATAC+AGG + chr4_1:35157901-35157920 Msa0545210:intron 25.0%
!! AAGAAAATTACCTCTTTTGA+GGG - chr4_1:35158043-35158062 None:intergenic 25.0%
!! TAAGAAAATTACCTCTTTTG+AGG - chr4_1:35158044-35158063 None:intergenic 25.0%
! AAAATTAAAAGCTTACTCTG+AGG - chr4_1:35158223-35158242 None:intergenic 25.0%
! AGTTCAAAGAATCACATAAT+TGG - chr4_1:35158254-35158273 None:intergenic 25.0%
!!! AAATGTTTTAATATGCGTCA+GGG - chr4_1:35158383-35158402 None:intergenic 25.0%
!!! TAAATGTTTTAATATGCGTC+AGG - chr4_1:35158384-35158403 None:intergenic 25.0%
! TTGCTCACTTAAATTAAACA+AGG + chr4_1:35158724-35158743 Msa0545210:CDS 25.0%
! AAAATTGAATCTTCTGTAGT+TGG - chr4_1:35159528-35159547 None:intergenic 25.0%
! ACTAACCAAATTGAATATTC+AGG + chr4_1:35159561-35159580 Msa0545210:intron 25.0%
! TTTGACCTGAATATTCAATT+TGG - chr4_1:35159569-35159588 None:intergenic 25.0%
!! TCATTAGGTTGTTTATGAAA+AGG - chr4_1:35159800-35159819 None:intergenic 25.0%
!! TTACTGAACAATATTGCTTT+TGG + chr4_1:35160095-35160114 Msa0545210:three_prime_UTR 25.0%
CCAATCAAATGAAAAACTGT+CGG + chr4_1:35153280-35153299 Msa0545210:five_prime_UTR 30.0%
ACTTCTTTATCTTTAGGTAG+TGG - chr4_1:35153328-35153347 None:intergenic 30.0%
!! GTGTTATTGTGATGTTTTTC+TGG + chr4_1:35153629-35153648 Msa0545210:five_prime_UTR 30.0%
TATTGAGAAGTTGTGATCAT+GGG + chr4_1:35153699-35153718 Msa0545210:exon 30.0%
AGTAACCATCTATAAAACGA+TGG - chr4_1:35153729-35153748 None:intergenic 30.0%
GTTACTCAACAAATATCCAA+AGG + chr4_1:35153743-35153762 Msa0545210:CDS 30.0%
TTAATGTCTTCAAACACCTT+TGG - chr4_1:35153762-35153781 None:intergenic 30.0%
! CATTTGAAGTGTTTGTGTTA+AGG - chr4_1:35153785-35153804 None:intergenic 30.0%
TAACACAAACACTTCAAATG+TGG + chr4_1:35153785-35153804 Msa0545210:CDS 30.0%
! TTGTTGTTGCTATCATCATT+AGG - chr4_1:35153864-35153883 None:intergenic 30.0%
AAGCTATTGTATATGGCTAT+TGG + chr4_1:35154059-35154078 Msa0545210:CDS 30.0%
CTAGGTTACATAATGTTAAG+AGG + chr4_1:35154137-35154156 Msa0545210:intron 30.0%
AGGTTACATAATGTTAAGAG+GGG + chr4_1:35154139-35154158 Msa0545210:intron 30.0%
AACTACTAAAATACCCACAA+CGG + chr4_1:35154323-35154342 Msa0545210:intron 30.0%
TAAATGACTAAAAAACCCAG+CGG - chr4_1:35154359-35154378 None:intergenic 30.0%
AAATAACCACGTATTAGTGT+TGG + chr4_1:35154464-35154483 Msa0545210:intron 30.0%
!! AGTGTTTGGTGTTAGTAATA+TGG + chr4_1:35154491-35154510 Msa0545210:intron 30.0%
! AAGTTGCTTTCATAAGTTCT+CGG - chr4_1:35154576-35154595 None:intergenic 30.0%
TTGATCAAATAACTCAACCA+AGG + chr4_1:35154835-35154854 Msa0545210:intron 30.0%
! TGTTTTTCATATTGACCAGA+CGG + chr4_1:35154861-35154880 Msa0545210:intron 30.0%
TACACGAATTTCATCGTATT+TGG - chr4_1:35154940-35154959 None:intergenic 30.0%
TCACATTACTAAAGCCAAAA+GGG - chr4_1:35155773-35155792 None:intergenic 30.0%
ATCACATTACTAAAGCCAAA+AGG - chr4_1:35155774-35155793 None:intergenic 30.0%
GCATCAACATTAAAGATTGA+AGG - chr4_1:35155941-35155960 None:intergenic 30.0%
AATTAATTCTTTGCATGTGC+AGG + chr4_1:35155998-35156017 Msa0545210:intron 30.0%
ATTAATTCTTTGCATGTGCA+GGG + chr4_1:35155999-35156018 Msa0545210:intron 30.0%
! TTTTGCATATTTGGTTGTTG+AGG + chr4_1:35156156-35156175 Msa0545210:CDS 30.0%
TTTGCATATTTGGTTGTTGA+GGG + chr4_1:35156157-35156176 Msa0545210:CDS 30.0%
TGAGATAGAAATGAAGATAC+AGG + chr4_1:35156187-35156206 Msa0545210:CDS 30.0%
! AGATCAAAGACGAAGTTTTT+GGG - chr4_1:35156218-35156237 None:intergenic 30.0%
! AAGATCAAAGACGAAGTTTT+TGG - chr4_1:35156219-35156238 None:intergenic 30.0%
! ATCTTCATTTGTTTCTTTGC+TGG + chr4_1:35156260-35156279 Msa0545210:CDS 30.0%
GTCGAGTATGTTTAATTGTT+TGG + chr4_1:35156378-35156397 Msa0545210:intron 30.0%
!! TTGTTTGGTTCCATTTTGTT+AGG + chr4_1:35156393-35156412 Msa0545210:intron 30.0%
!! TGTTTGGTTCCATTTTGTTA+GGG + chr4_1:35156394-35156413 Msa0545210:intron 30.0%
TAAACTTGGAGAATATCTTG+TGG + chr4_1:35156459-35156478 Msa0545210:CDS 30.0%
ATATCTTGTGGACATAAACA+AGG + chr4_1:35156471-35156490 Msa0545210:CDS 30.0%
! CCCTAACTGTTTTCATATAA+TGG - chr4_1:35156601-35156620 None:intergenic 30.0%
TTCGAGACAAAAAATTGAGA+AGG + chr4_1:35156718-35156737 Msa0545210:CDS 30.0%
! TGCGTATGCTATTTGAAAAA+TGG + chr4_1:35156774-35156793 Msa0545210:intron 30.0%
TTCACACTAGAATGCAATAT+TGG + chr4_1:35156994-35157013 Msa0545210:intron 30.0%
AGCAAATGCATAAAAGAGAA+AGG + chr4_1:35157101-35157120 Msa0545210:CDS 30.0%
AACAAATGTAAAAGGCCTAT+CGG - chr4_1:35157178-35157197 None:intergenic 30.0%
!! GTAGTAGCTATTTTCTATGT+CGG - chr4_1:35157495-35157514 None:intergenic 30.0%
!! GTTCTTCAATACTACTTTTC+AGG + chr4_1:35157640-35157659 Msa0545210:CDS 30.0%
GTTTGAAAATAATCAAGGTC+TGG - chr4_1:35157735-35157754 None:intergenic 30.0%
AGGCAGTTTGAAAATAATCA+AGG - chr4_1:35157740-35157759 None:intergenic 30.0%
! GTCTAGGTTTGAACATTTTA+AGG - chr4_1:35157760-35157779 None:intergenic 30.0%
AATAACCGAACCGTATTAAA+TGG + chr4_1:35157801-35157820 Msa0545210:intron 30.0%
AAAAACTGAACCAAACAAGA+GGG - chr4_1:35157851-35157870 None:intergenic 30.0%
!! GTGAGAGTAAATTTTGAGAA+AGG + chr4_1:35157978-35157997 Msa0545210:CDS 30.0%
TGTATGCAAACTTCCATATA+TGG + chr4_1:35158486-35158505 Msa0545210:CDS 30.0%
!!! AGTCTTTTTTCGTCCATATA+TGG - chr4_1:35158502-35158521 None:intergenic 30.0%
! TATGGACGAAAAAAGACTTT+TGG + chr4_1:35158504-35158523 Msa0545210:CDS 30.0%
! GAAATTCAGTTGAAGTTGAT+AGG + chr4_1:35158663-35158682 Msa0545210:CDS 30.0%
!!! GCAAATTTTTTCTGCTAACT+TGG - chr4_1:35158708-35158727 None:intergenic 30.0%
CTCACTTAAATTAAACAAGG+TGG + chr4_1:35158727-35158746 Msa0545210:CDS 30.0%
TGGTCATTACTCAAAATTGA+TGG + chr4_1:35158765-35158784 Msa0545210:intron 30.0%
! AAGATTTTACCTTTTCTGGA+AGG - chr4_1:35159118-35159137 None:intergenic 30.0%
! CAACAAGATTTTACCTTTTC+TGG - chr4_1:35159122-35159141 None:intergenic 30.0%
CAGAAAAGGTAAAATCTTGT+TGG + chr4_1:35159120-35159139 Msa0545210:intron 30.0%
!! AGAAAATTTGTTAGCTAACG+AGG + chr4_1:35159169-35159188 Msa0545210:intron 30.0%
!! GAAAATTTGTTAGCTAACGA+GGG + chr4_1:35159170-35159189 Msa0545210:intron 30.0%
AAGATAGTCTGCAAAACAAA+TGG - chr4_1:35159276-35159295 None:intergenic 30.0%
ACATAAATGAGACGATATTG+TGG + chr4_1:35159304-35159323 Msa0545210:CDS 30.0%
! AGTCAGCATTATAATCGTTT+TGG + chr4_1:35159336-35159355 Msa0545210:CDS 30.0%
! GTCAGCATTATAATCGTTTT+GGG + chr4_1:35159337-35159356 Msa0545210:CDS 30.0%
CAAAATAGACCAATTACAGT+CGG + chr4_1:35159424-35159443 Msa0545210:intron 30.0%
ATTATGTGTCTAATGCAACA+CGG - chr4_1:35159474-35159493 None:intergenic 30.0%
CATAAACAACCTAATGATCA+TGG + chr4_1:35159803-35159822 Msa0545210:CDS 30.0%
ATTCAAAGGATAAAAGTCGT+TGG + chr4_1:35159966-35159985 Msa0545210:CDS 30.0%
AAGGTAAAAGTGAAAACAGT+TGG + chr4_1:35160061-35160080 Msa0545210:intron 30.0%
!! TGAAATGATCATTTTGGCAT+TGG + chr4_1:35160122-35160141 Msa0545210:three_prime_UTR 30.0%
!! GAAATGATCATTTTGGCATT+GGG + chr4_1:35160123-35160142 Msa0545210:three_prime_UTR 30.0%
! CCGACAGTTTTTCATTTGAT+TGG - chr4_1:35153283-35153302 None:intergenic 35.0%
!! TTTAGGTAGTGGAGTAAGAA+AGG - chr4_1:35153317-35153336 None:intergenic 35.0%
CATAATGGTCTATGAGATGA+TGG - chr4_1:35153466-35153485 None:intergenic 35.0%
! AGAAATGGTGAGAAGCATAA+TGG - chr4_1:35153481-35153500 None:intergenic 35.0%
ATTGAGTGGCAGTTTAGAAA+TGG - chr4_1:35153496-35153515 None:intergenic 35.0%
CACTTGTAAAAGAAGATGAG+AGG - chr4_1:35153578-35153597 None:intergenic 35.0%
!!! GTTTCTCTTTTGCTGGTTTA+AGG - chr4_1:35153672-35153691 None:intergenic 35.0%
! GTACTATGTTTCTCTTTTGC+TGG - chr4_1:35153679-35153698 None:intergenic 35.0%
CTATTGAGAAGTTGTGATCA+TGG + chr4_1:35153698-35153717 Msa0545210:exon 35.0%
! GTGTTCCATCGTTTTATAGA+TGG + chr4_1:35153721-35153740 Msa0545210:CDS 35.0%
TCATCATTAGGATGGAAACA+AGG - chr4_1:35153852-35153871 None:intergenic 35.0%
TGTTGCTATCATCATTAGGA+TGG - chr4_1:35153860-35153879 None:intergenic 35.0%
ACTTCCACAAATGTTGTTGA+AGG - chr4_1:35153984-35154003 None:intergenic 35.0%
GGTTACATAATGTTAAGAGG+GGG + chr4_1:35154140-35154159 Msa0545210:intron 35.0%
GTTACATAATGTTAAGAGGG+GGG + chr4_1:35154141-35154160 Msa0545210:intron 35.0%
!! CACATTTTAGCAAACCTAAG+TGG + chr4_1:35154208-35154227 Msa0545210:intron 35.0%
! ATAGAACTATTTCTCCACCT+TGG - chr4_1:35154258-35154277 None:intergenic 35.0%
TTTGTATTTATAGGAAGCCG+AGG + chr4_1:35155053-35155072 Msa0545210:intron 35.0%
ACTGAGGAAGGAATTTGAAA+TGG + chr4_1:35155083-35155102 Msa0545210:CDS 35.0%
! AGGAAGGAATTTGAAATGGA+AGG + chr4_1:35155087-35155106 Msa0545210:CDS 35.0%
! GACACTTCACATTCTTGTTT+AGG - chr4_1:35155126-35155145 None:intergenic 35.0%
TTATCTGATGCTAATGTTCC+TGG + chr4_1:35155398-35155417 Msa0545210:CDS 35.0%
TATAAACAGTGAACCGTGTT+CGG - chr4_1:35155485-35155504 None:intergenic 35.0%
AACACGGTTCACTGTTTATA+TGG + chr4_1:35155485-35155504 Msa0545210:CDS 35.0%
GGTTCACTGTTTATATGGAT+TGG + chr4_1:35155490-35155509 Msa0545210:CDS 35.0%
!!! AACCTTTTATTTTGGTGTGC+AGG + chr4_1:35155578-35155597 Msa0545210:intron 35.0%
ATCCTGCACACCAAAATAAA+AGG - chr4_1:35155583-35155602 None:intergenic 35.0%
GATGCTGATCTTATAATGCT+TGG + chr4_1:35155600-35155619 Msa0545210:CDS 35.0%
ACTAAAGCCAAAAGGGTAAA+GGG - chr4_1:35155766-35155785 None:intergenic 35.0%
TACTAAAGCCAAAAGGGTAA+AGG - chr4_1:35155767-35155786 None:intergenic 35.0%
AATTAAACCTTGAACCGCAT+TGG - chr4_1:35156062-35156081 None:intergenic 35.0%
ATATCCAAAGATGGCATGTA+AGG - chr4_1:35156299-35156318 None:intergenic 35.0%
TCAATTGCACCCTAACAAAA+TGG - chr4_1:35156406-35156425 None:intergenic 35.0%
! GGGTGCAATTGATTTACTTA+TGG + chr4_1:35156414-35156433 Msa0545210:intron 35.0%
TTATGCATTCATGGACTCAT+TGG + chr4_1:35156802-35156821 Msa0545210:intron 35.0%
ACAGAATGCATGTGATTACA+TGG + chr4_1:35156856-35156875 Msa0545210:CDS 35.0%
! AAAGGCGACTTGTTTAAAAG+TGG + chr4_1:35157119-35157138 Msa0545210:CDS 35.0%
ACAAATGTAAAAGGCCTATC+GGG - chr4_1:35157177-35157196 None:intergenic 35.0%
! AAAGAGAAGTTTTCTGTGGA+AGG + chr4_1:35157362-35157381 Msa0545210:CDS 35.0%
!!! CTTCCTTTTTAGCTCAATGT+TGG - chr4_1:35157393-35157412 None:intergenic 35.0%
CAACATTGAGCTAAAAAGGA+AGG + chr4_1:35157391-35157410 Msa0545210:CDS 35.0%
CCAAATAAGAAAGACGTTGT+AGG - chr4_1:35157436-35157455 None:intergenic 35.0%
CCTACAACGTCTTTCTTATT+TGG + chr4_1:35157433-35157452 Msa0545210:intron 35.0%
AGTGATTGCAATTTGACTGT+AGG + chr4_1:35157588-35157607 Msa0545210:intron 35.0%
CTTTGAACCGCCATTTAATA+CGG - chr4_1:35157814-35157833 None:intergenic 35.0%
CAAAAACTGAACCAAACAAG+AGG - chr4_1:35157852-35157871 None:intergenic 35.0%
ATCAATTGTGCATAGGCTTT+AGG - chr4_1:35158166-35158185 None:intergenic 35.0%
ATCCAACATCAATTGTGCAT+AGG - chr4_1:35158173-35158192 None:intergenic 35.0%
!! AGTTGAAGTTGATAGGTTGT+TGG + chr4_1:35158670-35158689 Msa0545210:CDS 35.0%
!!! CTCATATTTTTTAGCAGCGA+CGG + chr4_1:35158876-35158895 Msa0545210:intron 35.0%
TAGGTTGCAATATGCTATCT+TGG + chr4_1:35159195-35159214 Msa0545210:intron 35.0%
AGTCTGCAAAACAAATGGAA+TGG - chr4_1:35159271-35159290 None:intergenic 35.0%
!! AGCATTATAATCGTTTTGGG+AGG + chr4_1:35159340-35159359 Msa0545210:CDS 35.0%
!!! TATAATCGTTTTGGGAGGTA+CGG + chr4_1:35159345-35159364 Msa0545210:intron 35.0%
TTTCCCATTTACTATGTGTG+TGG + chr4_1:35159385-35159404 Msa0545210:intron 35.0%
GATCCACACACATAGTAAAT+GGG - chr4_1:35159391-35159410 None:intergenic 35.0%
TGATCCACACACATAGTAAA+TGG - chr4_1:35159392-35159411 None:intergenic 35.0%
!! CGACTGTAATTGGTCTATTT+TGG - chr4_1:35159426-35159445 None:intergenic 35.0%
!! ACCAATTACAGTCGGTTTTA+TGG + chr4_1:35159432-35159451 Msa0545210:intron 35.0%
!! CCAATTACAGTCGGTTTTAT+GGG + chr4_1:35159433-35159452 Msa0545210:intron 35.0%
!! CAATTACAGTCGGTTTTATG+GGG + chr4_1:35159434-35159453 Msa0545210:intron 35.0%
GGTCAAATAATCAAGACACT+TGG + chr4_1:35159582-35159601 Msa0545210:intron 35.0%
TGGATGAATTCAAACAGAGA+AGG + chr4_1:35159602-35159621 Msa0545210:CDS 35.0%
ACCAAAACTAGTTGAGTTAG+GGG - chr4_1:35159645-35159664 None:intergenic 35.0%
CACCAAAACTAGTTGAGTTA+GGG - chr4_1:35159646-35159665 None:intergenic 35.0%
AAACAACCTAATGATCATGG+AGG + chr4_1:35159806-35159825 Msa0545210:CDS 35.0%
TAAGATCCTCCATGATCATT+AGG - chr4_1:35159815-35159834 None:intergenic 35.0%
ATTCGAACAATGTGTATGCA+TGG + chr4_1:35159894-35159913 Msa0545210:CDS 35.0%
!! GATAAAAGTCGTTGGTAACA+TGG + chr4_1:35159974-35159993 Msa0545210:exon 35.0%
!! CTGAACAATATTGCTTTTGG+TGG + chr4_1:35160098-35160117 Msa0545210:three_prime_UTR 35.0%
! GGTGGTTGAAATGATCATTT+TGG + chr4_1:35160116-35160135 Msa0545210:three_prime_UTR 35.0%
! ATTGGGTTGTATAGCTGTTA+TGG + chr4_1:35160140-35160159 Msa0545210:three_prime_UTR 35.0%
!! ACTTTTTAGTCCCTTCCGTT+AGG - chr4_1:35153114-35153133 None:intergenic 40.0%
! GTCTATGAGATGATGGTGAA+GGG - chr4_1:35153459-35153478 None:intergenic 40.0%
TGACTGAGATTGAGATTGAG+TGG - chr4_1:35153510-35153529 None:intergenic 40.0%
TGCTCCTTCAACAACATTTG+TGG + chr4_1:35153977-35153996 Msa0545210:CDS 40.0%
! GATTTTGTAGGGAACCACTT+AGG - chr4_1:35154225-35154244 None:intergenic 40.0%
! GTTTGCTTGCGGATTTTGTA+GGG - chr4_1:35154236-35154255 None:intergenic 40.0%
GAAGTGAACGTGTGCTTTAT+CGG + chr4_1:35154395-35154414 Msa0545210:intron 40.0%
! TAACCACGTATTAGTGTTGG+TGG + chr4_1:35154467-35154486 Msa0545210:intron 40.0%
!! TTAGTGTTGGTGGTAGTGTT+TGG + chr4_1:35154477-35154496 Msa0545210:intron 40.0%
TATAACATTAGGGGCCTGTT+TGG - chr4_1:35154802-35154821 None:intergenic 40.0%
ATTCATGCAGCAACTTTCGA+AGG + chr4_1:35155176-35155195 Msa0545210:CDS 40.0%
GGATATCCTCTGATCCATTA+TGG + chr4_1:35155223-35155242 Msa0545210:CDS 40.0%
ATCCTCTGATCCATTATGGA+AGG + chr4_1:35155227-35155246 Msa0545210:CDS 40.0%
TCCTCTGATCCATTATGGAA+GGG + chr4_1:35155228-35155247 Msa0545210:CDS 40.0%
!! TCCATTATGGAAGGGTGTTA+TGG + chr4_1:35155236-35155255 Msa0545210:CDS 40.0%
ACCATAACACCCTTCCATAA+TGG - chr4_1:35155240-35155259 None:intergenic 40.0%
ATGCTAATGTTCCTGGAGAA+GGG + chr4_1:35155405-35155424 Msa0545210:CDS 40.0%
! ATTTTATGTTCCCCTTCTCC+AGG - chr4_1:35155419-35155438 None:intergenic 40.0%
TCATTCATAAGGAAACAGCG+TGG + chr4_1:35155443-35155462 Msa0545210:CDS 40.0%
TCCTGATTATGATCCGAACA+CGG + chr4_1:35155469-35155488 Msa0545210:CDS 40.0%
! GATGAAACCCTTTACCCTTT+TGG + chr4_1:35155756-35155775 Msa0545210:intron 40.0%
TGTCAGACATTGACATGTGT+GGG + chr4_1:35155912-35155931 Msa0545210:intron 40.0%
! GCTTGCAGCTTTTGCATATT+TGG + chr4_1:35156147-35156166 Msa0545210:intron 40.0%
!! TCAAAGACGAAGTTTTTGGG+AGG - chr4_1:35156215-35156234 None:intergenic 40.0%
ACTTCGTCTTTGATCTTGAG+CGG + chr4_1:35156222-35156241 Msa0545210:CDS 40.0%
ACCTCGTGAATATCCAAAGA+TGG - chr4_1:35156308-35156327 None:intergenic 40.0%
AAACAGTTAGGGGAGAAACA+TGG + chr4_1:35156609-35156628 Msa0545210:intron 40.0%
AGACTGAGGACAAACATTGT+CGG - chr4_1:35156939-35156958 None:intergenic 40.0%
CTTACTTCTTCATCAGACTG+AGG - chr4_1:35156953-35156972 None:intergenic 40.0%
TGGAGATTTCTTGACTGACA+AGG + chr4_1:35157139-35157158 Msa0545210:CDS 40.0%
!!! GGTATTCACTTTTTCCCGAT+AGG + chr4_1:35157160-35157179 Msa0545210:intron 40.0%
!!! CCTTTTTAGCTCAATGTTGG+TGG - chr4_1:35157390-35157409 None:intergenic 40.0%
CCACCAACATTGAGCTAAAA+AGG + chr4_1:35157387-35157406 Msa0545210:CDS 40.0%
! TAGGTTCAGAAGTACACTGA+AGG + chr4_1:35157607-35157626 Msa0545210:intron 40.0%
AGTACACTGAAGGATTGTTG+TGG + chr4_1:35157617-35157636 Msa0545210:CDS 40.0%
GTACACTGAAGGATTGTTGT+GGG + chr4_1:35157618-35157637 Msa0545210:CDS 40.0%
!! ACTTTTCAGGAGTTGCTTCA+TGG + chr4_1:35157653-35157672 Msa0545210:CDS 40.0%
AACCGAACCGTATTAAATGG+CGG + chr4_1:35157804-35157823 Msa0545210:intron 40.0%
AACCGCCATTTAATACGGTT+CGG - chr4_1:35157809-35157828 None:intergenic 40.0%
!! AGGTTTTATCCCTACCACTA+TGG + chr4_1:35157921-35157940 Msa0545210:intron 40.0%
TCCATTTGCTTCGGACTTAA+AGG + chr4_1:35157944-35157963 Msa0545210:CDS 40.0%
CCATTTGCTTCGGACTTAAA+GGG + chr4_1:35157945-35157964 Msa0545210:CDS 40.0%
TAAGTGTTCTCCCTCAAAAG+AGG + chr4_1:35158030-35158049 Msa0545210:CDS 40.0%
AGCCTATGCACAATTGATGT+TGG + chr4_1:35158168-35158187 Msa0545210:CDS 40.0%
TAATCCATTCTTGAGTTCGC+TGG - chr4_1:35158536-35158555 None:intergenic 40.0%
CAGAAGCTGCAAATATTTGC+AGG - chr4_1:35158793-35158812 None:intergenic 40.0%
GAAGGTTTACACCAGATAAG+AGG - chr4_1:35159100-35159119 None:intergenic 40.0%
TGGTGTAAACCTTCCAGAAA+AGG + chr4_1:35159106-35159125 Msa0545210:CDS 40.0%
TTGTTAGCTAACGAGGGTTT+AGG + chr4_1:35159176-35159195 Msa0545210:intron 40.0%
TATGCTATCTTGGTCTCTTG+TGG + chr4_1:35159205-35159224 Msa0545210:intron 40.0%
CCCATAAAACCGACTGTAAT+TGG - chr4_1:35159436-35159455 None:intergenic 40.0%
CCAAAACTAGTTGAGTTAGG+GGG - chr4_1:35159644-35159663 None:intergenic 40.0%
CCACCAAAACTAGTTGAGTT+AGG - chr4_1:35159647-35159666 None:intergenic 40.0%
!!! CCTAACTCAACTAGTTTTGG+TGG + chr4_1:35159644-35159663 Msa0545210:CDS 40.0%
! CCTTTGTGAATTGATTCTGG+AGG - chr4_1:35159692-35159711 None:intergenic 40.0%
CCTCCAGAATCAATTCACAA+AGG + chr4_1:35159689-35159708 Msa0545210:CDS 40.0%
! GCTCCTTTGTGAATTGATTC+TGG - chr4_1:35159695-35159714 None:intergenic 40.0%
GAATCAATTCACAAAGGAGC+TGG + chr4_1:35159695-35159714 Msa0545210:CDS 40.0%
ATTCACAAAGGAGCTGGTAT+TGG + chr4_1:35159701-35159720 Msa0545210:CDS 40.0%
CGAATTCCAACAGCTCATTT+AGG + chr4_1:35159930-35159949 Msa0545210:CDS 40.0%
TCCTTTGAATCACTCCATTG+AGG - chr4_1:35159956-35159975 None:intergenic 40.0%
!! AGGTAGTGGAGTAAGAAAGG+AGG - chr4_1:35153314-35153333 None:intergenic 45.0%
! GGTCTATGAGATGATGGTGA+AGG - chr4_1:35153460-35153479 None:intergenic 45.0%
GAGAGGTTGAGAGTGATGAA+GGG - chr4_1:35153561-35153580 None:intergenic 45.0%
TGAGAGGTTGAGAGTGATGA+AGG - chr4_1:35153562-35153581 None:intergenic 45.0%
GCCTCGCAAGCTATTGTATA+TGG + chr4_1:35154052-35154071 Msa0545210:CDS 45.0%
! GCCATATACAATAGCTTGCG+AGG - chr4_1:35154056-35154075 None:intergenic 45.0%
!! GGTTTGCTTGCGGATTTTGT+AGG - chr4_1:35154237-35154256 None:intergenic 45.0%
CAAAATCCGCAAGCAAACCA+AGG + chr4_1:35154238-35154257 Msa0545210:intron 45.0%
CGGTAGTTAACTACCGTTGT+GGG - chr4_1:35154339-35154358 None:intergenic 45.0%
AACGGTAGTTAACTACCGCT+GGG + chr4_1:35154341-35154360 Msa0545210:intron 45.0%
CTACCACCAACACTAATACG+TGG - chr4_1:35154473-35154492 None:intergenic 45.0%
GAGCGAAAATGAACCAGCAA+AGG + chr4_1:35154895-35154914 Msa0545210:CDS 45.0%
TGAACCAGCAAAGGACTAGA+CGG + chr4_1:35154904-35154923 Msa0545210:CDS 45.0%
TAAACCGTCTAGTCCTTTGC+TGG - chr4_1:35154911-35154930 None:intergenic 45.0%
!! ACCCTTCCATAATGGATCAG+AGG - chr4_1:35155232-35155251 None:intergenic 45.0%
GATGCTAATGTTCCTGGAGA+AGG + chr4_1:35155404-35155423 Msa0545210:CDS 45.0%
TGCTAATGTTCCTGGAGAAG+GGG + chr4_1:35155406-35155425 Msa0545210:CDS 45.0%
ACCGTGTTCGGATCATAATC+AGG - chr4_1:35155473-35155492 None:intergenic 45.0%
GTGTCAGACATTGACATGTG+TGG + chr4_1:35155911-35155930 Msa0545210:intron 45.0%
GGCAGCTTCTCATTATAGTC+AGG - chr4_1:35156029-35156048 None:intergenic 45.0%
! TTGAACCGCATTGGAGCATT+TGG - chr4_1:35156053-35156072 None:intergenic 45.0%
AAATGCTCCAATGCGGTTCA+AGG + chr4_1:35156052-35156071 Msa0545210:CDS 45.0%
TCTGCCTTACATGCCATCTT+TGG + chr4_1:35156292-35156311 Msa0545210:CDS 45.0%
GCCATCTTTGGATATTCACG+AGG + chr4_1:35156304-35156323 Msa0545210:CDS 45.0%
TGCTCGATCAAGTTTCGTCT+AGG - chr4_1:35157776-35157795 None:intergenic 45.0%
ACTGGTTGAACCCTCTTGTT+TGG + chr4_1:35157838-35157857 Msa0545210:intron 45.0%
GCAAATGGACCATAGTGGTA+GGG - chr4_1:35157933-35157952 None:intergenic 45.0%
AGCAAATGGACCATAGTGGT+AGG - chr4_1:35157934-35157953 None:intergenic 45.0%
CCACTATGGTCCATTTGCTT+CGG + chr4_1:35157935-35157954 Msa0545210:CDS 45.0%
CCCTTTAAGTCCGAAGCAAA+TGG - chr4_1:35157948-35157967 None:intergenic 45.0%
!! TAGAAGGAAAGCGCTTCATG+TGG + chr4_1:35158322-35158341 Msa0545210:CDS 45.0%
GAAACCAGCGAACTCAAGAA+TGG + chr4_1:35158529-35158548 Msa0545210:CDS 45.0%
! GTTGATAGGTTGTTGGTCAG+CGG + chr4_1:35158677-35158696 Msa0545210:CDS 45.0%
ACAAGGTGGACACAAGCATA+AGG + chr4_1:35158741-35158760 Msa0545210:CDS 45.0%
!!! TTTTTTAGCAGCGACGGCAT+TGG + chr4_1:35158882-35158901 Msa0545210:intron 45.0%
TGTTGTTCTCAACACACTCG+TGG - chr4_1:35158926-35158945 None:intergenic 45.0%
CTGGTGGTACAAGTCATGTT+CGG + chr4_1:35159072-35159091 Msa0545210:CDS 45.0%
ATCTTGGTCTCTTGTGGTCT+TGG + chr4_1:35159211-35159230 Msa0545210:intron 45.0%
!! CCCCCTAACTCAACTAGTTT+TGG + chr4_1:35159641-35159660 Msa0545210:CDS 45.0%
! ACAAAGGAGCTGGTATTGGA+TGG + chr4_1:35159705-35159724 Msa0545210:CDS 45.0%
! CAAAGGAGCTGGTATTGGAT+GGG + chr4_1:35159706-35159725 Msa0545210:CDS 45.0%
! AAAGGAGCTGGTATTGGATG+GGG + chr4_1:35159707-35159726 Msa0545210:CDS 45.0%
CAGGTAGAGGGAAATCAGAA+AGG + chr4_1:35159732-35159751 Msa0545210:CDS 45.0%
TTGAGGCCTAAATGAGCTGT+TGG - chr4_1:35159939-35159958 None:intergenic 45.0%
ACAGCTCATTTAGGCCTCAA+TGG + chr4_1:35159939-35159958 Msa0545210:CDS 45.0%
GCCTCAATGGAGTGATTCAA+AGG + chr4_1:35159952-35159971 Msa0545210:CDS 45.0%
!!! ATTTAAAATTATTAAATGTA+AGG - chr4_1:35154448-35154467 None:intergenic 5.0%
!! TAATATAGAAAAATAAATAA+GGG - chr4_1:35156524-35156543 None:intergenic 5.0%
!! TTAATATAGAAAAATAAATA+AGG - chr4_1:35156525-35156544 None:intergenic 5.0%
AATCCGCAAGCAAACCAAGG+TGG + chr4_1:35154241-35154260 Msa0545210:intron 50.0%
!! TCTCCACCTTGGTTTGCTTG+CGG - chr4_1:35154247-35154266 None:intergenic 50.0%
GCGGTAGTTAACTACCGTTG+TGG - chr4_1:35154340-35154359 None:intergenic 50.0%
CAACGGTAGTTAACTACCGC+TGG + chr4_1:35154340-35154359 Msa0545210:intron 50.0%
!!! TGCTGGTTCATTTTCGCTCG+TGG - chr4_1:35154894-35154913 None:intergenic 50.0%
CTTCCTCAGTCTCTCTTCCT+CGG - chr4_1:35155073-35155092 None:intergenic 50.0%
TGCTGCATGAATTCTGTCCC+TGG - chr4_1:35155168-35155187 None:intergenic 50.0%
TGCCACCAAATGCTCCAATG+CGG + chr4_1:35156045-35156064 Msa0545210:CDS 50.0%
! AACCGCATTGGAGCATTTGG+TGG - chr4_1:35156050-35156069 None:intergenic 50.0%
CGCTTTCATAGAGTCCGAGA+AGG - chr4_1:35157472-35157491 None:intergenic 50.0%
CAGGAGTTGCTTCATGGACA+TGG + chr4_1:35157659-35157678 Msa0545210:CDS 50.0%
ATGGCGGTTCAAAGCGTAAC+TGG + chr4_1:35157820-35157839 Msa0545210:intron 50.0%
CCGAAGCAAATGGACCATAG+TGG - chr4_1:35157938-35157957 None:intergenic 50.0%
TGCTTCGGACTTAAAGGGCA+TGG + chr4_1:35157950-35157969 Msa0545210:CDS 50.0%
AATATGCGTCAGGGTCGTGT+CGG - chr4_1:35158374-35158393 None:intergenic 50.0%
GGTGGACACAAGCATAAGGT+TGG + chr4_1:35158745-35158764 Msa0545210:intron 50.0%
GTCAAATACGAGCATCCTGC+TGG + chr4_1:35159053-35159072 Msa0545210:CDS 50.0%
AAATACGAGCATCCTGCTGG+TGG + chr4_1:35159056-35159075 Msa0545210:CDS 50.0%
! ACATGACTTGTACCACCAGC+AGG - chr4_1:35159071-35159090 None:intergenic 50.0%
CATGTTCGGCACCTCTTATC+TGG + chr4_1:35159086-35159105 Msa0545210:CDS 50.0%
AATGCAACACGGTCTGCAGT+CGG - chr4_1:35159463-35159482 None:intergenic 50.0%
ATTGGATGGGGTTCAGGTAG+AGG + chr4_1:35159719-35159738 Msa0545210:CDS 50.0%
TTGGATGGGGTTCAGGTAGA+GGG + chr4_1:35159720-35159739 Msa0545210:CDS 50.0%
! CAAAAGGCACATGCGAACGT+TGG - chr4_1:35159847-35159866 None:intergenic 50.0%
! CAACGTTCGCATGTGCCTTT+TGG + chr4_1:35159845-35159864 Msa0545210:CDS 50.0%
! TCGCATGTGCCTTTTGGTAG+AGG + chr4_1:35159851-35159870 Msa0545210:CDS 50.0%
CTACCTCGTCCTCTACCAAA+AGG - chr4_1:35159863-35159882 None:intergenic 50.0%
! CTTTTGGTAGAGGACGAGGT+AGG + chr4_1:35159861-35159880 Msa0545210:CDS 50.0%
AAGCCGAGGAAGAGAGACTG+AGG + chr4_1:35155067-35155086 Msa0545210:CDS 55.0%
CGAGGAAGAGAGACTGAGGA+AGG + chr4_1:35155071-35155090 Msa0545210:CDS 55.0%
!! AGGAAAGCGCTTCATGTGGC+AGG + chr4_1:35158326-35158345 Msa0545210:CDS 55.0%
! TTTAGCAGCGACGGCATTGG+AGG + chr4_1:35158885-35158904 Msa0545210:intron 55.0%
! TTAGCAGCGACGGCATTGGA+GGG + chr4_1:35158886-35158905 Msa0545210:intron 55.0%
! GCTGGTATTGGATGGGGTTC+AGG + chr4_1:35159713-35159732 Msa0545210:CDS 55.0%
! GTGCCTTTTGGTAGAGGACG+AGG + chr4_1:35159857-35159876 Msa0545210:CDS 55.0%
GCTCGTGGAGCTACTCCGTC+TGG - chr4_1:35154879-35154898 None:intergenic 65.0%
! CGTCAGGGTCGTGTCGGTGT+CGG - chr4_1:35158368-35158387 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 35153022 35160242 35153022 ID=Msa0545210;Name=Msa0545210
chr4_1 mRNA 35153022 35160242 35153022 ID=Msa0545210-mRNA-1;Parent=Msa0545210;Name=Msa0545210-mRNA-1;_AED=0.13;_eAED=0.13;_QI=695|1|1|1|0.95|0.91|24|224|878
chr4_1 exon 35153022 35153884 35153022 ID=Msa0545210-mRNA-1:exon:8882;Parent=Msa0545210-mRNA-1
chr4_1 exon 35153975 35154080 35153975 ID=Msa0545210-mRNA-1:exon:8883;Parent=Msa0545210-mRNA-1
chr4_1 exon 35154880 35154956 35154880 ID=Msa0545210-mRNA-1:exon:8884;Parent=Msa0545210-mRNA-1
chr4_1 exon 35155066 35155257 35155066 ID=Msa0545210-mRNA-1:exon:8885;Parent=Msa0545210-mRNA-1
chr4_1 exon 35155392 35155511 35155392 ID=Msa0545210-mRNA-1:exon:8886;Parent=Msa0545210-mRNA-1
chr4_1 exon 35155600 35155662 35155600 ID=Msa0545210-mRNA-1:exon:8887;Parent=Msa0545210-mRNA-1
chr4_1 exon 35156020 35156073 35156020 ID=Msa0545210-mRNA-1:exon:8888;Parent=Msa0545210-mRNA-1
chr4_1 exon 35156155 35156325 35156155 ID=Msa0545210-mRNA-1:exon:8889;Parent=Msa0545210-mRNA-1
chr4_1 exon 35156415 35156492 35156415 ID=Msa0545210-mRNA-1:exon:8890;Parent=Msa0545210-mRNA-1
chr4_1 exon 35156615 35156764 35156615 ID=Msa0545210-mRNA-1:exon:8891;Parent=Msa0545210-mRNA-1
chr4_1 exon 35156848 35156967 35156848 ID=Msa0545210-mRNA-1:exon:8892;Parent=Msa0545210-mRNA-1
chr4_1 exon 35157065 35157160 35157065 ID=Msa0545210-mRNA-1:exon:8893;Parent=Msa0545210-mRNA-1
chr4_1 exon 35157323 35157418 35157323 ID=Msa0545210-mRNA-1:exon:8894;Parent=Msa0545210-mRNA-1
chr4_1 exon 35157610 35157680 35157610 ID=Msa0545210-mRNA-1:exon:8895;Parent=Msa0545210-mRNA-1
chr4_1 exon 35157923 35158051 35157923 ID=Msa0545210-mRNA-1:exon:8896;Parent=Msa0545210-mRNA-1
chr4_1 exon 35158150 35158226 35158150 ID=Msa0545210-mRNA-1:exon:8897;Parent=Msa0545210-mRNA-1
chr4_1 exon 35158307 35158347 35158307 ID=Msa0545210-mRNA-1:exon:8898;Parent=Msa0545210-mRNA-1
chr4_1 exon 35158484 35158558 35158484 ID=Msa0545210-mRNA-1:exon:8899;Parent=Msa0545210-mRNA-1
chr4_1 exon 35158647 35158762 35158647 ID=Msa0545210-mRNA-1:exon:8900;Parent=Msa0545210-mRNA-1
chr4_1 exon 35158890 35158964 35158890 ID=Msa0545210-mRNA-1:exon:8901;Parent=Msa0545210-mRNA-1
chr4_1 exon 35159049 35159127 35159049 ID=Msa0545210-mRNA-1:exon:8902;Parent=Msa0545210-mRNA-1
chr4_1 exon 35159288 35159361 35159288 ID=Msa0545210-mRNA-1:exon:8903;Parent=Msa0545210-mRNA-1
chr4_1 exon 35159583 35160036 35159583 ID=Msa0545210-mRNA-1:exon:8904;Parent=Msa0545210-mRNA-1
chr4_1 exon 35160064 35160242 35160064 ID=Msa0545210-mRNA-1:exon:8905;Parent=Msa0545210-mRNA-1
chr4_1 five_prime_UTR 35153022 35153716 35153022 ID=Msa0545210-mRNA-1:five_prime_utr;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35153717 35153884 35153717 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35153975 35154080 35153975 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35154880 35154956 35154880 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35155066 35155257 35155066 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35155392 35155511 35155392 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35155600 35155662 35155600 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35156020 35156073 35156020 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35156155 35156325 35156155 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35156415 35156492 35156415 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35156615 35156764 35156615 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35156848 35156967 35156848 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35157065 35157160 35157065 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35157323 35157418 35157323 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35157610 35157680 35157610 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35157923 35158051 35157923 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35158150 35158226 35158150 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35158307 35158347 35158307 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35158484 35158558 35158484 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35158647 35158762 35158647 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35158890 35158964 35158890 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35159049 35159127 35159049 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35159288 35159361 35159288 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 CDS 35159583 35159991 35159583 ID=Msa0545210-mRNA-1:cds;Parent=Msa0545210-mRNA-1
chr4_1 three_prime_UTR 35159992 35160036 35159992 ID=Msa0545210-mRNA-1:three_prime_utr;Parent=Msa0545210-mRNA-1
chr4_1 three_prime_UTR 35160064 35160242 35160064 ID=Msa0545210-mRNA-1:three_prime_utr;Parent=Msa0545210-mRNA-1
Gene Sequence

>Msa0545210

ATGGGTGTTCCATCGTTTTATAGATGGTTACTCAACAAATATCCAAAGGTGTTTGAAGACATTAACCTTAACACAAACACTTCAAATGTGGAATATGATAATCTTTATCTTGACATGAATTCTATTATTCATCCTTGTTTCCATCCTAATGATGATAGCAACAACAATAGTGCTCCTTCAACAACATTTGTGGAAGTGTTTGCAAATATGTTTGAGTACATTGATCGTCTTGTTACTATTGTTAAGCCTCGCAAGCTATTGTATATGGCTATTGACGGAGTAGCTCCACGAGCGAAAATGAACCAGCAAAGGACTAGACGGTTTAGAACAGCCAAATACGATGAAATTCGTGAAGCCGAGGAAGAGAGACTGAGGAAGGAATTTGAAATGGAAGGCAAACAAGTTCTTCCTAAACAAGAATGTGAAGTGTCAGATTCAAATATTATAACACCAGGGACAGAATTCATGCAGCAACTTTCGAAGGCTCTCAAGAGTTATATTTCTTCAAGGATATCCTCTGATCCATTATGGAAGGGTGTTATGGTAATTTTATCTGATGCTAATGTTCCTGGAGAAGGGGAACATAAAATTATGTCATTCATAAGGAAACAGCGTGGTCTTCCTGATTATGATCCGAACACGGTTCACTGTTTATATGGATTGGATGCTGATCTTATAATGCTTGGACTGTCATGCCATGAACCTCATTTTTCAATTTTAAGAGAGGGTGTGCCTGACTATAATGAGAAGCTGCCACCAAATGCTCCAATGCGGTTCAAGCTTTTGCATATTTGGTTGTTGAGGGAATATCTTGAGATAGAAATGAAGATACAGGATCCTCCCAAAAACTTCGTCTTTGATCTTGAGCGGATTGTTGATGATTTTATCTTCATTTGTTTCTTTGCTGGAAATGATTTTCTGCCTTACATGCCATCTTTGGATATTCACGAGGGTGCAATTGATTTACTTATGGCTGTTTACAAAAAAGAGTTCAATAAACTTGGAGAATATCTTGTGGACATAAACAAGTTAGGGGAGAAACATGGTGCTTATGTGAAGCTATCAAGAGTTGAAAAATTCATTCTTATGGTTGGTACATATGAAGAAAAAATCTTCAACAAAAGAACTGCGATTCGAGACAAAAAATTGAGAAGGCTTATTAGTGATCATGAACAATCAAAGCAAGAACAGAATGCATGTGATTACATGGATTTCGACAGTGAAAGCAGTTCAAATTGCGCTCTTCGAATTAAAAAAGCTCAAGCTTCCGACAATGTTTGTCCTCAGTCTGATGAAGAAATATTGAAAAACACACAAGATTTGAAAGAGAAAGTAAGCAAATGCATAAAAGAGAAAGGCGACTTGTTTAAAAGTGGAGATTTCTTGACTGACAAGATAAAATTAGGAACTGTTGGCTTTAAAGAGAGATATTATAAAGAGAAGTTTTCTGTGGAAGGCTCCACCAACATTGAGCTAAAAAGGAAGGAAATTGTTCAGAAGTACACTGAAGGATTGTTGTGGGTTCTTCAATACTACTTTTCAGGAGTTGCTTCATGGACATGGTTTTATCCCTACCACTATGGTCCATTTGCTTCGGACTTAAAGGGCATGGCTCAAGTGAGAGTAAATTTTGAGAAAGGTGTTCCATTCTTACCTTTTGATCAACTTTTAAGTGTTCTCCCTCAAAAGAGTGCTTATGCACTTCCTAAAGCCTATGCACAATTGATGTTGGATGAACAGTCGAAAATATTTGACTTGTATCCTCAGAATTTTGAAATTGATATAGAAGGAAAGCGCTTCATGTGGCAGGGTGTATGCAAACTTCCATATATGGACGAAAAAAGACTTTTGGCTGAAACCAGCGAACTCAAGAATGGATTATCTGAAAGTGAAGCAAAAAGAAATTCAGTTGAAGTTGATAGGTTGTTGGTCAGCGGCACTACCAAGTTAGCAGAAAAAATTTGCTCACTTAAATTAAACAAGGTGGACACAAGCATAAGCAGCGACGGCATTGGAGGGATCATAAGTCTTTGCCACGAGTGTGTTGAGAACAACAAACAAGAAGATATTGTATTCTGTGTCAAATACGAGCATCCTGCTGGTGGTACAAGTCATGTTCGGCACCTCTTATCTGGTGTAAACCTTCCAGAAAAGACTATCTTTGAAAACGACATAAATGAGACGATATTGTGGCATGATCAAAGTCAGCATTATAATCGTTTTGGGAGGTCAAATAATCAAGACACTTGGATGAATTCAAACAGAGAAGGAAATGTTTCAAAATTTCCCCCTAACTCAACTAGTTTTGGTGGAAGAAGCTTTTCACGAAATGCACCTCCAGAATCAATTCACAAAGGAGCTGGTATTGGATGGGGTTCAGGTAGAGGGAAATCAGAAAGGATTGATCACGATACGATCAACGAAAAGATGACGTCGTTTTCTCCTTTTCATAAACAACCTAATGATCATGGAGGATCTTATTATCAACACCAACGTTCGCATGTGCCTTTTGGTAGAGGACGAGGTAGGACTAGTCAGAATTCGAACAATGTGTATGCATGGAAGTGTGTTTCTTCGAATTCCAACAGCTCATTTAGGCCTCAATGGAGTGATTCAAAGGATAAAAGTCGTTGGTAA

Protein sequence

>Msa0545210

MGVPSFYRWLLNKYPKVFEDINLNTNTSNVEYDNLYLDMNSIIHPCFHPNDDSNNNSAPSTTFVEVFANMFEYIDRLVTIVKPRKLLYMAIDGVAPRAKMNQQRTRRFRTAKYDEIREAEEERLRKEFEMEGKQVLPKQECEVSDSNIITPGTEFMQQLSKALKSYISSRISSDPLWKGVMVILSDANVPGEGEHKIMSFIRKQRGLPDYDPNTVHCLYGLDADLIMLGLSCHEPHFSILREGVPDYNEKLPPNAPMRFKLLHIWLLREYLEIEMKIQDPPKNFVFDLERIVDDFIFICFFAGNDFLPYMPSLDIHEGAIDLLMAVYKKEFNKLGEYLVDINKLGEKHGAYVKLSRVEKFILMVGTYEEKIFNKRTAIRDKKLRRLISDHEQSKQEQNACDYMDFDSESSSNCALRIKKAQASDNVCPQSDEEILKNTQDLKEKVSKCIKEKGDLFKSGDFLTDKIKLGTVGFKERYYKEKFSVEGSTNIELKRKEIVQKYTEGLLWVLQYYFSGVASWTWFYPYHYGPFASDLKGMAQVRVNFEKGVPFLPFDQLLSVLPQKSAYALPKAYAQLMLDEQSKIFDLYPQNFEIDIEGKRFMWQGVCKLPYMDEKRLLAETSELKNGLSESEAKRNSVEVDRLLVSGTTKLAEKICSLKLNKVDTSISSDGIGGIISLCHECVENNKQEDIVFCVKYEHPAGGTSHVRHLLSGVNLPEKTIFENDINETILWHDQSQHYNRFGRSNNQDTWMNSNREGNVSKFPPNSTSFGGRSFSRNAPPESIHKGAGIGWGSGRGKSERIDHDTINEKMTSFSPFHKQPNDHGGSYYQHQRSHVPFGRGRGRTSQNSNNVYAWKCVSSNSNSSFRPQWSDSKDKSRW*