AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0969450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0969450 MtrunA17_Chr6g0469931 54.128 218 61 5 1 185 1 212 2.08e-63 218
Msa0969450 MtrunA17_Chr6g0469811 49.635 137 52 1 2 121 11 147 5.61e-41 144
Msa0969450 MtrunA17_Chr2g0279021 29.119 261 150 6 147 377 16 271 1.15e-28 117
Msa0969450 MtrunA17_Chr8g0374181 35.338 133 85 1 246 377 21 153 3.33e-24 102
Msa0969450 MtrunA17_Chr7g0259081 33.742 163 91 1 1 146 1 163 1.49e-22 94.7
Msa0969450 MtrunA17_Chr3g0093401 29.557 203 118 3 1 180 1 201 1.57e-21 93.6
Msa0969450 MtrunA17_Chr7g0234721 34.969 163 89 3 1 146 1 163 3.41e-21 93.6
Msa0969450 MtrunA17_Chr4g0077081 33.333 135 56 2 218 325 28 155 1.24e-20 89.0
Msa0969450 MtrunA17_Chr4g0010241 35.507 138 78 1 39 165 75 212 7.00e-20 88.6
Msa0969450 MtrunA17_Chr4g0019691 32.593 135 86 2 246 377 29 161 7.79e-20 87.4
Msa0969450 MtrunA17_Chr1g0193821 35.915 142 78 3 44 185 1 129 1.33e-17 82.4
Msa0969450 MtrunA17_Chr1g0168201 38.393 112 66 2 281 391 15 124 3.48e-15 73.2
Msa0969450 MtrunA17_Chr1g0206481 25.243 206 123 5 11 186 11 215 4.05e-14 73.2
Msa0969450 MtrunA17_Chr6g0471721 36.538 104 64 1 276 377 2 105 3.30e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0969450 AT1G52950.1 20.577 520 300 18 10 451 12 496 2.89e-17 85.1

Find 143 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCGCTGATTATGATTATT+TGG 0.171120 6_4:+939779 Msa0969450:CDS
ATTTGAAATATCAGCTTATA+TGG 0.194564 6_4:-939672 None:intergenic
GGGAAGGATGATGTTGTTTA+AGG 0.226381 6_4:+941101 Msa0969450:CDS
TCATGTTTGATGGATCTTAT+AGG 0.299693 6_4:+941148 Msa0969450:CDS
AACTCAATCCAGATCAAGTT+TGG 0.306008 6_4:-942449 None:intergenic
CTTCGCTTGGTCCTCGCATT+AGG 0.310386 6_4:+940508 Msa0969450:CDS
CAGTAATATGCACCAGAATC+AGG 0.344639 6_4:-940696 None:intergenic
TTTCAGAAGAAGTTGGTAGA+AGG 0.346459 6_4:+939582 Msa0969450:intron
CGGTGTGGGCGCAAACTTCT+TGG 0.348141 6_4:-939761 None:intergenic
CAAACTTCTTGGATCTTAAT+CGG 0.352336 6_4:-939750 None:intergenic
GGAAGCTGGGGAAGGATTGC+CGG 0.355817 6_4:+940128 Msa0969450:CDS
GTTGTGGAAGGTTTGGTTGA+GGG 0.360112 6_4:+940627 Msa0969450:intron
CAGAATTCCTCAACAATAGA+TGG 0.369411 6_4:-941192 None:intergenic
CATGTTTGATGGATCTTATA+GGG 0.370520 6_4:+941149 Msa0969450:CDS
AATATAACCTTGGAACCATA+TGG 0.377849 6_4:-940743 None:intergenic
GGATGCTGAGTTGAGTGAAT+TGG 0.378551 6_4:+941969 Msa0969450:CDS
AGGAGTGTTACTCCTGATTC+TGG 0.380403 6_4:+940684 Msa0969450:CDS
AATTATGTGTTGTAGGTATA+AGG 0.382305 6_4:+940822 Msa0969450:intron
CAAGGCTCCCAAACTTGATC+TGG 0.387928 6_4:+942441 Msa0969450:CDS
AGCCTGATCAGGTTTCAAAA+AGG 0.390572 6_4:-939346 None:intergenic
GGTCGTGTGTCTGATACATC+TGG 0.392611 6_4:+942063 Msa0969450:CDS
GATGTTGTTGGTTTGATGAC+TGG 0.398535 6_4:+939884 Msa0969450:intron
CAGATCAAGTTTGGGAGCCT+TGG 0.400511 6_4:-942440 None:intergenic
AAGGTTGAGTGTGCGTTGTT+TGG 0.400585 6_4:+940072 Msa0969450:intron
CTGCCGAGAGAGAGTACGTT+AGG 0.402987 6_4:+939912 Msa0969450:CDS
GCAGTGTTTGTGATGTTTGA+TGG 0.403092 6_4:+940877 Msa0969450:CDS
TGTTTGTGTGATATTGTTCC+TGG 0.404785 6_4:+939270 Msa0969450:CDS
AAATACTGCTCCAGTTCTTA+AGG 0.409409 6_4:+942092 Msa0969450:CDS
CAAAATGTTACCTTAAGAAC+TGG 0.411162 6_4:-942102 None:intergenic
GCAAATTGAACCACAACAAC+CGG 0.411747 6_4:-940147 None:intergenic
TTGTGGAAGGTTTGGTTGAG+GGG 0.411929 6_4:+940628 Msa0969450:intron
ATTACAAAATGCAAATAAAC+AGG 0.419512 6_4:-940213 None:intergenic
TCCTGAGATTGTTAGTTTGA+AGG 0.424223 6_4:+941080 Msa0969450:CDS
TCAACAGAGTTAGCCTGATC+AGG 0.429762 6_4:-939357 None:intergenic
CGCAAGGCATTTGACGCAGT+TGG 0.430086 6_4:+942388 Msa0969450:CDS
TAATTCTGTGTAGATGTTGT+TGG 0.433961 6_4:+939872 Msa0969450:intron
CTCTGTTAGGCTGAAAATGC+TGG 0.435251 6_4:+941048 Msa0969450:intron
TCTAGTGTTGTTCCTTCGCT+TGG 0.436276 6_4:+940495 Msa0969450:CDS
CCCTTCAAACTAACAATCTC+AGG 0.442351 6_4:-941081 None:intergenic
CTACTGCTGCTGAGAAGAAT+GGG 0.445703 6_4:+942338 Msa0969450:CDS
CAGACCCTAGCTGTGGATCC+TGG 0.446283 6_4:+942253 Msa0969450:CDS
TCATACTTTGCAGTTTCCCC+TGG 0.446588 6_4:+939621 Msa0969450:CDS
CAGAAGAAGTTGGTAGAAGG+AGG 0.447420 6_4:+939585 Msa0969450:intron
TGTGTCTCCTCAACAACCTC+TGG 0.450330 6_4:-942000 None:intergenic
GATGCTGAGTTGAGTGAATT+GGG 0.450630 6_4:+941970 Msa0969450:CDS
GTCGAGAAGACTGCATCTGC+AGG 0.453268 6_4:+941123 Msa0969450:CDS
AGCGAAGGAACAACACTAGA+AGG 0.454161 6_4:-940492 None:intergenic
TTTGCAGTTTCCCCTGGTGT+TGG 0.454872 6_4:+939627 Msa0969450:CDS
GCTACTGCTGCTGAGAAGAA+TGG 0.456853 6_4:+942337 Msa0969450:CDS
ATGCAAATAAACAGGCAAAC+AGG 0.459237 6_4:-940205 None:intergenic
GCAGTAGCTCCTGACAGGTC+TGG 0.460741 6_4:-942322 None:intergenic
TCTGCAGGGGTCATGTTTGA+TGG 0.461394 6_4:+941138 Msa0969450:CDS
ATGTTGTTGGTTTGATGACT+GGG 0.464793 6_4:+939885 Msa0969450:CDS
AATATCACACAAACAATCAA+TGG 0.466623 6_4:-939262 None:intergenic
TGGATGTGAGGCTGTAAGTT+TGG 0.469171 6_4:+942273 Msa0969450:CDS
ATCCTGCGCGTCGTTGTCAT+AGG 0.469694 6_4:+940664 Msa0969450:CDS
CCTGAGATTGTTAGTTTGAA+GGG 0.471203 6_4:+941081 Msa0969450:CDS
GGATGGAAAGGTTACTAAGA+TGG 0.473621 6_4:+939934 Msa0969450:CDS
AGAGTACGTTAGGGATGGAA+AGG 0.475235 6_4:+939922 Msa0969450:CDS
TGTGGAAGGTTTGGTTGAGG+GGG 0.488124 6_4:+940629 Msa0969450:intron
TGTTGTGGAAGGTTTGGTTG+AGG 0.488730 6_4:+940626 Msa0969450:intron
TGGATCTTATAGGGTGAAGA+GGG 0.492867 6_4:+941158 Msa0969450:CDS
GGATCAAGGTGCGTGTGCTT+AGG 0.496137 6_4:+939307 Msa0969450:CDS
AATGTGCAGTTTGTGTCTGA+TGG 0.498589 6_4:+941943 Msa0969450:intron
GCTGATTATGATTATTTGGT+TGG 0.504058 6_4:+939783 Msa0969450:CDS
ACTCAATCCAGATCAAGTTT+GGG 0.509725 6_4:-942448 None:intergenic
TATCAGCTTATATGGATGAA+TGG 0.512952 6_4:-939664 None:intergenic
TGTTGAGGAGACACAAATTG+AGG 0.516639 6_4:+942008 Msa0969450:CDS
ATCCCTAACGTACTCTCTCT+CGG 0.520307 6_4:-939915 None:intergenic
CATTAGGCCTTCGATTGAAG+AGG 0.522179 6_4:+940524 Msa0969450:CDS
AATATCAGTGTTGCAATCCA+TGG 0.525062 6_4:+940462 Msa0969450:intron
CAGCAGCAGTAGCTCCTGAC+AGG 0.525221 6_4:-942327 None:intergenic
TGATTCTCTCCAGAAGATGA+TGG 0.528400 6_4:+940104 Msa0969450:CDS
CACTAGAAGGTTCAATGCCA+TGG 0.529130 6_4:-940479 None:intergenic
ATCCTCCATGACTCTCTACC+AGG 0.529476 6_4:-939288 None:intergenic
AGATTGTTAGTTTGAAGGGA+AGG 0.530656 6_4:+941085 Msa0969450:CDS
AATGTTGTTGTTACTCCAGT+GGG 0.530779 6_4:+942042 Msa0969450:CDS
TTTAAAAGTCCAGACCTGTC+AGG 0.532245 6_4:+942313 Msa0969450:CDS
ATCGGAGAAAGTCCATGCAC+AGG 0.532897 6_4:-939732 None:intergenic
GGAAGGATTGCCGGTTGTTG+TGG 0.534201 6_4:+940137 Msa0969450:CDS
GATTCTCTCCAGAAGATGAT+GGG 0.535338 6_4:+940105 Msa0969450:CDS
TGTGAAGCATGTGTTCCATA+TGG 0.535840 6_4:+940728 Msa0969450:CDS
GTACGGTATGAGCCAACACC+AGG 0.538319 6_4:-939639 None:intergenic
GACACAAATTGAGGATTTCG+TGG 0.538543 6_4:+942017 Msa0969450:CDS
AAACTTACAGCCTCACATCC+AGG 0.544375 6_4:-942271 None:intergenic
GCTGTAAGTTTGGCGGATGA+TGG 0.546225 6_4:+942283 Msa0969450:CDS
CACATCCAGGATCCACAGCT+AGG 0.550757 6_4:-942258 None:intergenic
GTATCAGACACACGACCCAC+TGG 0.552972 6_4:-942057 None:intergenic
TAGAGAGTCATGGAGGATCA+AGG 0.553834 6_4:+939293 Msa0969450:CDS
TTCTGGTGCATATTACTGCA+AGG 0.555168 6_4:+940701 Msa0969450:CDS
TCAGGCTAACTCTGTTGAGA+TGG 0.555939 6_4:+939362 Msa0969450:CDS
CTCCTATGACAACGACGCGC+AGG 0.556082 6_4:-940666 None:intergenic
GCGAAAATTAAAATATTCCG+AGG 0.559220 6_4:+940168 Msa0969450:CDS
GGAATTCTGCACTTCTGTCA+AGG 0.559554 6_4:+941206 Msa0969450:CDS
ATGGATCTTATAGGGTGAAG+AGG 0.564607 6_4:+941157 Msa0969450:CDS
ATGTGTTCCATATGGTTCCA+AGG 0.573536 6_4:+940736 Msa0969450:CDS
AAGAAATCCTCTTCAATCGA+AGG 0.574744 6_4:-940531 None:intergenic
GCAGTTTGTGTCTGATGGTG+TGG 0.575103 6_4:+941948 Msa0969450:intron
TAATGTTGTTGTTACTCCAG+TGG 0.578117 6_4:+942041 Msa0969450:CDS
TATATGGATGAATGGTAGTA+CGG 0.578247 6_4:-939656 None:intergenic
TGCCGAGAGAGAGTACGTTA+GGG 0.578680 6_4:+939913 Msa0969450:CDS
AATGAAGACAAAGGTGGAGA+GGG 0.584507 6_4:+939692 Msa0969450:CDS
AGCTGTGGATCCTGGATGTG+AGG 0.585040 6_4:+942261 Msa0969450:CDS
GGTGACATGCAACTGTTGCT+TGG 0.586225 6_4:+940898 Msa0969450:CDS
TTGTTCCTGGTAGAGAGTCA+TGG 0.586636 6_4:+939283 Msa0969450:CDS
TGAGGATCCAGAGGTTGTTG+AGG 0.588057 6_4:+941993 Msa0969450:CDS
ATAATCATAATCAGCGGTGT+GGG 0.589439 6_4:-939775 None:intergenic
GAGAGAGAGTACGTTAGGGA+TGG 0.590043 6_4:+939917 Msa0969450:CDS
GGTGCGTGTGCTTAGGATGT+GGG 0.592953 6_4:+939314 Msa0969450:CDS
TGTTGATCCATCTATTGTTG+AGG 0.594848 6_4:+941185 Msa0969450:CDS
TCGAGAAGACTGCATCTGCA+GGG 0.595551 6_4:+941124 Msa0969450:CDS
AGGTGCGTGTGCTTAGGATG+TGG 0.597101 6_4:+939313 Msa0969450:CDS
ATGTGAGGCTGTAAGTTTGG+CGG 0.600972 6_4:+942276 Msa0969450:CDS
ACATCCAGGATCCACAGCTA+GGG 0.605603 6_4:-942257 None:intergenic
TATCTGTTTATATGCAGAGA+GGG 0.606584 6_4:+940250 Msa0969450:CDS
AGGACAGAAAATTTATACCT+CGG 0.608770 6_4:-940185 None:intergenic
AAATGAAGACAAAGGTGGAG+AGG 0.612097 6_4:+939691 Msa0969450:CDS
AGTTCACTTATCCCTGTGCA+TGG 0.617904 6_4:+939720 Msa0969450:CDS
TCTGGTGCATATTACTGCAA+GGG 0.618450 6_4:+940702 Msa0969450:CDS
AATAATCATAATCAGCGGTG+TGG 0.624084 6_4:-939776 None:intergenic
AGCTAAGAGAAATTTGCGCA+AGG 0.625659 6_4:+942372 Msa0969450:CDS
CGAGAAGACTGCATCTGCAG+GGG 0.629581 6_4:+941125 Msa0969450:CDS
CTGGTGCATATTACTGCAAG+GGG 0.631078 6_4:+940703 Msa0969450:CDS
TCGGAGAAAGTCCATGCACA+GGG 0.632550 6_4:-939731 None:intergenic
ATTTCAAATGAAGACAAAGG+TGG 0.632682 6_4:+939686 Msa0969450:CDS
GATATTTCAAATGAAGACAA+AGG 0.634663 6_4:+939683 Msa0969450:CDS
ATTCTCTCCAGAAGATGATG+GGG 0.636639 6_4:+940106 Msa0969450:CDS
GTCGTGTGTCTGATACATCT+GGG 0.644547 6_4:+942064 Msa0969450:CDS
CTAATGCGAGGACCAAGCGA+AGG 0.655277 6_4:-940507 None:intergenic
AACCAAATAATCATAATCAG+CGG 0.658464 6_4:-939781 None:intergenic
TTCAAACTAACAATCTCAGG+AGG 0.664295 6_4:-941078 None:intergenic
TTTGCAGCAGACCCTAGCTG+TGG 0.668538 6_4:+942246 Msa0969450:intron
TGAGTTGAGTGAATTGGGTG+AGG 0.670731 6_4:+941975 Msa0969450:CDS
TCAATCGAAGGCCTAATGCG+AGG 0.683338 6_4:-940519 None:intergenic
TGAATTGGGTGAGGATCCAG+AGG 0.695337 6_4:+941984 Msa0969450:CDS
TTATCTGTTTATATGCAGAG+AGG 0.696528 6_4:+940249 Msa0969450:CDS
TACGGTATGAGCCAACACCA+GGG 0.699003 6_4:-939638 None:intergenic
ACGGTATGAGCCAACACCAG+GGG 0.704170 6_4:-939637 None:intergenic
CACTACCACCAAGAAAACCA+AGG 0.705071 6_4:+942423 Msa0969450:CDS
TACTGCTGCTGAGAAGAATG+GGG 0.711790 6_4:+942339 Msa0969450:CDS
TTCTCTCCAGAAGATGATGG+GGG 0.715015 6_4:+940107 Msa0969450:CDS
GCGTGTGCTTAGGATGTGGG+AGG 0.715566 6_4:+939317 Msa0969450:CDS
TTCCTGGTAGAGAGTCATGG+AGG 0.748573 6_4:+939286 Msa0969450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAAATTTTAAAATTAAAAC+AGG - chr6_4:939846-939865 None:intergenic 10.0%
!!! TATTATTCAAATATTTTGTA+TGG + chr6_4:940782-940801 Msa0969450:intron 10.0%
!!! TATTTGCATTTTGTAATTTA+TGG + chr6_4:940219-940238 Msa0969450:CDS 15.0%
!!! ATTTGCATTTTGTAATTTAT+GGG + chr6_4:940220-940239 Msa0969450:CDS 15.0%
!! GTGTATATTTATTCTATTAA+CGG + chr6_4:941400-941419 Msa0969450:intron 15.0%
!!! ATCAATATATTTTTCAGAAA+AGG - chr6_4:941847-941866 None:intergenic 15.0%
!!! GGTTTATATAAATTTAGAAT+AGG + chr6_4:942143-942162 Msa0969450:intron 15.0%
!!! TTATATAAATTTAGAATAGG+AGG + chr6_4:942146-942165 Msa0969450:intron 15.0%
!!! GATTATTTATTTTGTCTATC+AGG + chr6_4:939409-939428 Msa0969450:intron 20.0%
!! TATAAATTTCTCAATAGTAC+AGG - chr6_4:939456-939475 None:intergenic 20.0%
!!! ATTTGAAATATCAGCTTATA+TGG - chr6_4:939675-939694 None:intergenic 20.0%
!! ATTACAAAATGCAAATAAAC+AGG - chr6_4:940216-940235 None:intergenic 20.0%
!!! AACTCATAGATATTTTTCTT+GGG - chr6_4:940567-940586 None:intergenic 20.0%
!!! GGTTTAATTTAATATAACCT+TGG - chr6_4:940756-940775 None:intergenic 20.0%
!! AATATTTGAATAATAGCGAT+GGG - chr6_4:940777-940796 None:intergenic 20.0%
!! AAATATTTGAATAATAGCGA+TGG - chr6_4:940778-940797 None:intergenic 20.0%
!! TTATTGTAATTATGTGTTGT+AGG + chr6_4:940815-940834 Msa0969450:intron 20.0%
!! ATTAACGGAAAATTTATGTT+AGG + chr6_4:941415-941434 Msa0969450:intron 20.0%
!!! ACATTTTGCTTTTATAACTT+TGG + chr6_4:942117-942136 Msa0969450:intron 20.0%
!! AAGAATTTATGCAACAATTA+AGG - chr6_4:942223-942242 None:intergenic 20.0%
! AATATCACACAAACAATCAA+TGG - chr6_4:939265-939284 None:intergenic 25.0%
! GATATTTCAAATGAAGACAA+AGG + chr6_4:939683-939702 Msa0969450:CDS 25.0%
! AACCAAATAATCATAATCAG+CGG - chr6_4:939784-939803 None:intergenic 25.0%
!! AAACTATATTAACCCTGTTT+TGG + chr6_4:940033-940052 Msa0969450:intron 25.0%
!! ACTCATAGATATTTTTCTTG+GGG - chr6_4:940566-940585 None:intergenic 25.0%
!! CAACTCATAGATATTTTTCT+TGG - chr6_4:940568-940587 None:intergenic 25.0%
! AATTATGTGTTGTAGGTATA+AGG + chr6_4:940822-940841 Msa0969450:intron 25.0%
! TTGCAAATAAAGACAAAAAC+CGG - chr6_4:941004-941023 None:intergenic 25.0%
! TAGAATAAATATACACACCT+TGG - chr6_4:941396-941415 None:intergenic 25.0%
! TTAGTTCACTTGCAATAAAT+TGG + chr6_4:941449-941468 Msa0969450:intron 25.0%
!! ATAAATTGGACAGTTTCTTT+TGG + chr6_4:941463-941482 Msa0969450:intron 25.0%
! CAAAAGAGTGAAACATTTAA+TGG + chr6_4:941549-941568 Msa0969450:intron 25.0%
!! AGCATTGAGAAAAAAAACAT+TGG + chr6_4:941787-941806 Msa0969450:intron 25.0%
! AGAAAAGGCTTCATAATTAA+TGG - chr6_4:941832-941851 None:intergenic 25.0%
!! GATACTTTGGTAACTTAAAA+TGG - chr6_4:941896-941915 None:intergenic 25.0%
!!! TTTGCTTTTATAACTTTGGT+TGG + chr6_4:942121-942140 Msa0969450:intron 25.0%
!!! TTGCTTTTATAACTTTGGTT+GGG + chr6_4:942122-942141 Msa0969450:intron 25.0%
! AGGTAGACATATTATATTAG+TGG + chr6_4:942166-942185 Msa0969450:intron 25.0%
ATACAACAATTGCCTTCTAA+TGG - chr6_4:939559-939578 None:intergenic 30.0%
!! GTATGTTTTTCAGAAGAAGT+TGG + chr6_4:939575-939594 Msa0969450:intron 30.0%
TATATGGATGAATGGTAGTA+CGG - chr6_4:939659-939678 None:intergenic 30.0%
TATCAGCTTATATGGATGAA+TGG - chr6_4:939667-939686 None:intergenic 30.0%
ATTTCAAATGAAGACAAAGG+TGG + chr6_4:939686-939705 Msa0969450:CDS 30.0%
CAAACTTCTTGGATCTTAAT+CGG - chr6_4:939753-939772 None:intergenic 30.0%
GCTGATTATGATTATTTGGT+TGG + chr6_4:939783-939802 Msa0969450:CDS 30.0%
TAATTCTGTGTAGATGTTGT+TGG + chr6_4:939872-939891 Msa0969450:intron 30.0%
ATGAGAAAAACACCAAAACA+GGG - chr6_4:940048-940067 None:intergenic 30.0%
AATGAGAAAAACACCAAAAC+AGG - chr6_4:940049-940068 None:intergenic 30.0%
!!! TGTTTTGGTGTTTTTCTCAT+TGG + chr6_4:940048-940067 Msa0969450:intron 30.0%
GCGAAAATTAAAATATTCCG+AGG + chr6_4:940168-940187 Msa0969450:CDS 30.0%
AGGACAGAAAATTTATACCT+CGG - chr6_4:940188-940207 None:intergenic 30.0%
TTATCTGTTTATATGCAGAG+AGG + chr6_4:940249-940268 Msa0969450:CDS 30.0%
TATCTGTTTATATGCAGAGA+GGG + chr6_4:940250-940269 Msa0969450:CDS 30.0%
TTATGAACACGACTAGAATT+TGG + chr6_4:940288-940307 Msa0969450:intron 30.0%
TATGAACACGACTAGAATTT+GGG + chr6_4:940289-940308 Msa0969450:intron 30.0%
!!! TTTTTTCTGTTGTGTGACTT+TGG + chr6_4:940381-940400 Msa0969450:intron 30.0%
AATATAACCTTGGAACCATA+TGG - chr6_4:940746-940765 None:intergenic 30.0%
GAATCATCTATAACCAACTT+TGG - chr6_4:940953-940972 None:intergenic 30.0%
!! TTTGATGATGTATCTCTGTT+AGG + chr6_4:941035-941054 Msa0969450:intron 30.0%
! TCATGTTTGATGGATCTTAT+AGG + chr6_4:941148-941167 Msa0969450:CDS 30.0%
! CATGTTTGATGGATCTTATA+GGG + chr6_4:941149-941168 Msa0969450:CDS 30.0%
AACTACAAATGGAAAGCAAT+CGG - chr6_4:941302-941321 None:intergenic 30.0%
CAACAGAGAAAAACTACAAA+TGG - chr6_4:941313-941332 None:intergenic 30.0%
! TAGTTTTTCTCTGTTGTTGT+GGG + chr6_4:941317-941336 Msa0969450:intron 30.0%
ACGGAAAATTTATGTTAGGT+AGG + chr6_4:941419-941438 Msa0969450:intron 30.0%
TGGTTAGTATATATGTGCTT+TGG - chr6_4:941694-941713 None:intergenic 30.0%
!!! TAACCACTGTTTTTATTTGC+TGG + chr6_4:941708-941727 Msa0969450:intron 30.0%
TGTCGCATTAACTAATTATG+TGG + chr6_4:941738-941757 Msa0969450:intron 30.0%
CAAAATGTTACCTTAAGAAC+TGG - chr6_4:942105-942124 None:intergenic 30.0%
TGTTTGTGTGATATTGTTCC+TGG + chr6_4:939270-939289 Msa0969450:CDS 35.0%
GATCAGGTTTCAAAAAGGTT+GGG - chr6_4:939344-939363 None:intergenic 35.0%
TGATCAGGTTTCAAAAAGGT+TGG - chr6_4:939345-939364 None:intergenic 35.0%
!!! AACCTTTTTGAAACCTGATC+AGG + chr6_4:939344-939363 Msa0969450:CDS 35.0%
!!! GATGGTTTTGATTGATGAGA+AGG + chr6_4:939380-939399 Msa0969450:CDS 35.0%
!! TTTCAGAAGAAGTTGGTAGA+AGG + chr6_4:939582-939601 Msa0969450:intron 35.0%
ATAATCATAATCAGCGGTGT+GGG - chr6_4:939778-939797 None:intergenic 35.0%
AATAATCATAATCAGCGGTG+TGG - chr6_4:939779-939798 None:intergenic 35.0%
! CACCGCTGATTATGATTATT+TGG + chr6_4:939779-939798 Msa0969450:CDS 35.0%
TTTGATGTGGTTACTATGCA+GGG + chr6_4:939820-939839 Msa0969450:intron 35.0%
!! ATGTTGTTGGTTTGATGACT+GGG + chr6_4:939885-939904 Msa0969450:CDS 35.0%
! TGGTGTTTTTCTCATTGGTA+AGG + chr6_4:940053-940072 Msa0969450:intron 35.0%
ATGCAAATAAACAGGCAAAC+AGG - chr6_4:940208-940227 None:intergenic 35.0%
AATTTCACAGCCTCTTCAAA+AGG - chr6_4:940323-940342 None:intergenic 35.0%
AGGCTGTGAAATTTAGAGAA+GGG + chr6_4:940330-940349 Msa0969450:intron 35.0%
AATATCAGTGTTGCAATCCA+TGG + chr6_4:940462-940481 Msa0969450:intron 35.0%
AAGAAATCCTCTTCAATCGA+AGG - chr6_4:940534-940553 None:intergenic 35.0%
TTGGTTATAGATGATTCTCC+TGG + chr6_4:940956-940975 Msa0969450:intron 35.0%
TATTGTTGTGGTTTCTTCAC+CGG + chr6_4:940982-941001 Msa0969450:intron 35.0%
TTCAAACTAACAATCTCAGG+AGG - chr6_4:941081-941100 None:intergenic 35.0%
! TCCTGAGATTGTTAGTTTGA+AGG + chr6_4:941080-941099 Msa0969450:CDS 35.0%
! CCTGAGATTGTTAGTTTGAA+GGG + chr6_4:941081-941100 Msa0969450:CDS 35.0%
! AGATTGTTAGTTTGAAGGGA+AGG + chr6_4:941085-941104 Msa0969450:CDS 35.0%
TGTTGATCCATCTATTGTTG+AGG + chr6_4:941185-941204 Msa0969450:CDS 35.0%
CAGAATTCCTCAACAATAGA+TGG - chr6_4:941195-941214 None:intergenic 35.0%
! GTAGTTTTTCTCTGTTGTTG+TGG + chr6_4:941316-941335 Msa0969450:intron 35.0%
ATAAATATACACACCTTGGC+CGG - chr6_4:941392-941411 None:intergenic 35.0%
TAGGTATTAGAATCATGCTG+AGG + chr6_4:941497-941516 Msa0969450:intron 35.0%
AGGTATTAGAATCATGCTGA+GGG + chr6_4:941498-941517 Msa0969450:intron 35.0%
TTAAACGACATGATTCACGA+TGG - chr6_4:941621-941640 None:intergenic 35.0%
AAAACCCATGAATTGTTTGC+AGG + chr6_4:941639-941658 Msa0969450:intron 35.0%
TTGCCAGCAAATAAAAACAG+TGG - chr6_4:941714-941733 None:intergenic 35.0%
!!! CTGTTTTTATTTGCTGGCAA+TGG + chr6_4:941714-941733 Msa0969450:intron 35.0%
! CTCACTTTGTTTGGATACTT+TGG - chr6_4:941909-941928 None:intergenic 35.0%
! TAATGTTGTTGTTACTCCAG+TGG + chr6_4:942041-942060 Msa0969450:CDS 35.0%
! AATGTTGTTGTTACTCCAGT+GGG + chr6_4:942042-942061 Msa0969450:CDS 35.0%
AAATACTGCTCCAGTTCTTA+AGG + chr6_4:942092-942111 Msa0969450:CDS 35.0%
AACAATTAAGGTCTACAGAG+AGG - chr6_4:942211-942230 None:intergenic 35.0%
AGCCTGATCAGGTTTCAAAA+AGG - chr6_4:939349-939368 None:intergenic 40.0%
AGATTCATGCCACCATTAGA+AGG + chr6_4:939544-939563 Msa0969450:intron 40.0%
CAACAATTGCCTTCTAATGG+TGG - chr6_4:939556-939575 None:intergenic 40.0%
AAATGAAGACAAAGGTGGAG+AGG + chr6_4:939691-939710 Msa0969450:CDS 40.0%
AATGAAGACAAAGGTGGAGA+GGG + chr6_4:939692-939711 Msa0969450:CDS 40.0%
GTTTGATGTGGTTACTATGC+AGG + chr6_4:939819-939838 Msa0969450:intron 40.0%
!! GATGTTGTTGGTTTGATGAC+TGG + chr6_4:939884-939903 Msa0969450:intron 40.0%
GGATGGAAAGGTTACTAAGA+TGG + chr6_4:939934-939953 Msa0969450:CDS 40.0%
TGATTCTCTCCAGAAGATGA+TGG + chr6_4:940104-940123 Msa0969450:CDS 40.0%
GATTCTCTCCAGAAGATGAT+GGG + chr6_4:940105-940124 Msa0969450:CDS 40.0%
ATTCTCTCCAGAAGATGATG+GGG + chr6_4:940106-940125 Msa0969450:CDS 40.0%
GCAAATTGAACCACAACAAC+CGG - chr6_4:940150-940169 None:intergenic 40.0%
GAGGCTGTGAAATTTAGAGA+AGG + chr6_4:940329-940348 Msa0969450:intron 40.0%
! CTATGAGTTGAATGCCATTG+TGG + chr6_4:940578-940597 Msa0969450:intron 40.0%
ATAAATCCCATCCTCCACAA+TGG - chr6_4:940595-940614 None:intergenic 40.0%
! TTATGTTGTCTGTGCTGTTG+TGG + chr6_4:940611-940630 Msa0969450:intron 40.0%
CAGTAATATGCACCAGAATC+AGG - chr6_4:940699-940718 None:intergenic 40.0%
TTCTGGTGCATATTACTGCA+AGG + chr6_4:940701-940720 Msa0969450:CDS 40.0%
TCTGGTGCATATTACTGCAA+GGG + chr6_4:940702-940721 Msa0969450:CDS 40.0%
TGTGAAGCATGTGTTCCATA+TGG + chr6_4:940728-940747 Msa0969450:CDS 40.0%
ATGTGTTCCATATGGTTCCA+AGG + chr6_4:940736-940755 Msa0969450:CDS 40.0%
GCAGTGTTTGTGATGTTTGA+TGG + chr6_4:940877-940896 Msa0969450:CDS 40.0%
TTAGTTTCTGCAGCCAAAGT+TGG + chr6_4:940937-940956 Msa0969450:intron 40.0%
TTCTCCTGGTGATATTGTTG+TGG + chr6_4:940970-940989 Msa0969450:intron 40.0%
GAAACCACAACAATATCACC+AGG - chr6_4:940977-940996 None:intergenic 40.0%
CCCTTCAAACTAACAATCTC+AGG - chr6_4:941084-941103 None:intergenic 40.0%
! GGGAAGGATGATGTTGTTTA+AGG + chr6_4:941101-941120 Msa0969450:CDS 40.0%
ATGGATCTTATAGGGTGAAG+AGG + chr6_4:941157-941176 Msa0969450:CDS 40.0%
TGGATCTTATAGGGTGAAGA+GGG + chr6_4:941158-941177 Msa0969450:CDS 40.0%
!! AGCTGTTGCGTTTTGATGTA+TGG + chr6_4:941269-941288 Msa0969450:intron 40.0%
AATGGAAAGCAATCGGTCTT+AGG - chr6_4:941295-941314 None:intergenic 40.0%
!! TGAGGTTAGTGATTTGGTAG+AGG + chr6_4:941343-941362 Msa0969450:intron 40.0%
!! TAGTGATTTGGTAGAGGATC+TGG + chr6_4:941349-941368 Msa0969450:intron 40.0%
!! TCTTTTGGTTGCAGTAGTGT+AGG + chr6_4:941478-941497 Msa0969450:intron 40.0%
CTAGCCTGCAAACAATTCAT+GGG - chr6_4:941646-941665 None:intergenic 40.0%
TCTAGCCTGCAAACAATTCA+TGG - chr6_4:941647-941666 None:intergenic 40.0%
AGCATCTCACTCACTTTGTT+TGG - chr6_4:941918-941937 None:intergenic 40.0%
AATGTGCAGTTTGTGTCTGA+TGG + chr6_4:941943-941962 Msa0969450:intron 40.0%
! GATGCTGAGTTGAGTGAATT+GGG + chr6_4:941970-941989 Msa0969450:CDS 40.0%
TGTTGAGGAGACACAAATTG+AGG + chr6_4:942008-942027 Msa0969450:CDS 40.0%
GACACAAATTGAGGATTTCG+TGG + chr6_4:942017-942036 Msa0969450:CDS 40.0%
TTTAAAAGTCCAGACCTGTC+AGG + chr6_4:942313-942332 Msa0969450:CDS 40.0%
AGCTAAGAGAAATTTGCGCA+AGG + chr6_4:942372-942391 Msa0969450:CDS 40.0%
TTGTTCCTGGTAGAGAGTCA+TGG + chr6_4:939283-939302 Msa0969450:CDS 45.0%
TAGAGAGTCATGGAGGATCA+AGG + chr6_4:939293-939312 Msa0969450:CDS 45.0%
! TCAACAGAGTTAGCCTGATC+AGG - chr6_4:939360-939379 None:intergenic 45.0%
TCAGGCTAACTCTGTTGAGA+TGG + chr6_4:939362-939381 Msa0969450:CDS 45.0%
! TCCCTTTTCCTTCCTTTCGT+AGG + chr6_4:939515-939534 Msa0969450:intron 45.0%
CCCTACGAAAGGAAGGAAAA+GGG - chr6_4:939519-939538 None:intergenic 45.0%
! CCCTTTTCCTTCCTTTCGTA+GGG + chr6_4:939516-939535 Msa0969450:intron 45.0%
ACCCTACGAAAGGAAGGAAA+AGG - chr6_4:939520-939539 None:intergenic 45.0%
! TTTTCCTTCCTTTCGTAGGG+TGG + chr6_4:939519-939538 Msa0969450:intron 45.0%
TTTCCTTCCTTTCGTAGGGT+GGG + chr6_4:939520-939539 Msa0969450:intron 45.0%
!! CAGAAGAAGTTGGTAGAAGG+AGG + chr6_4:939585-939604 Msa0969450:intron 45.0%
TCATACTTTGCAGTTTCCCC+TGG + chr6_4:939621-939640 Msa0969450:CDS 45.0%
AGTTCACTTATCCCTGTGCA+TGG + chr6_4:939720-939739 Msa0969450:CDS 45.0%
GTAACCACATCAAACCACAC+TGG - chr6_4:939814-939833 None:intergenic 45.0%
ATCCCTAACGTACTCTCTCT+CGG - chr6_4:939918-939937 None:intergenic 45.0%
AGAGTACGTTAGGGATGGAA+AGG + chr6_4:939922-939941 Msa0969450:CDS 45.0%
AAGGTTGAGTGTGCGTTGTT+TGG + chr6_4:940072-940091 Msa0969450:intron 45.0%
! TTCTCTCCAGAAGATGATGG+GGG + chr6_4:940107-940126 Msa0969450:CDS 45.0%
!! GGTGAATCCTCCTTTTGAAG+AGG + chr6_4:940310-940329 Msa0969450:intron 45.0%
TTCACAGCCTCTTCAAAAGG+AGG - chr6_4:940320-940339 None:intergenic 45.0%
CACTAGAAGGTTCAATGCCA+TGG - chr6_4:940482-940501 None:intergenic 45.0%
AGCGAAGGAACAACACTAGA+AGG - chr6_4:940495-940514 None:intergenic 45.0%
! TCTAGTGTTGTTCCTTCGCT+TGG + chr6_4:940495-940514 Msa0969450:CDS 45.0%
CATTAGGCCTTCGATTGAAG+AGG + chr6_4:940524-940543 Msa0969450:CDS 45.0%
! TGAGTTGAATGCCATTGTGG+AGG + chr6_4:940581-940600 Msa0969450:intron 45.0%
TTGAATGCCATTGTGGAGGA+TGG + chr6_4:940585-940604 Msa0969450:intron 45.0%
TGAATGCCATTGTGGAGGAT+GGG + chr6_4:940586-940605 Msa0969450:intron 45.0%
! TGTTGTGGAAGGTTTGGTTG+AGG + chr6_4:940626-940645 Msa0969450:intron 45.0%
! GTTGTGGAAGGTTTGGTTGA+GGG + chr6_4:940627-940646 Msa0969450:intron 45.0%
! TTGTGGAAGGTTTGGTTGAG+GGG + chr6_4:940628-940647 Msa0969450:intron 45.0%
!! AGGAGTGTTACTCCTGATTC+TGG + chr6_4:940684-940703 Msa0969450:CDS 45.0%
CTGGTGCATATTACTGCAAG+GGG + chr6_4:940703-940722 Msa0969450:CDS 45.0%
CTCTGTTAGGCTGAAAATGC+TGG + chr6_4:941048-941067 Msa0969450:intron 45.0%
GGAATTCTGCACTTCTGTCA+AGG + chr6_4:941206-941225 Msa0969450:CDS 45.0%
!! GGGTTCTGAGGTTAGTGATT+TGG + chr6_4:941337-941356 Msa0969450:intron 45.0%
CTGCATGAAGTCATTGCCTT+TGG + chr6_4:941593-941612 Msa0969450:intron 45.0%
! GGATGCTGAGTTGAGTGAAT+TGG + chr6_4:941969-941988 Msa0969450:CDS 45.0%
! TGAGTTGAGTGAATTGGGTG+AGG + chr6_4:941975-941994 Msa0969450:CDS 45.0%
GTCGTGTGTCTGATACATCT+GGG + chr6_4:942064-942083 Msa0969450:CDS 45.0%
AAACTTACAGCCTCACATCC+AGG - chr6_4:942274-942293 None:intergenic 45.0%
TGGATGTGAGGCTGTAAGTT+TGG + chr6_4:942273-942292 Msa0969450:CDS 45.0%
ATGTGAGGCTGTAAGTTTGG+CGG + chr6_4:942276-942295 Msa0969450:CDS 45.0%
CTACTGCTGCTGAGAAGAAT+GGG + chr6_4:942338-942357 Msa0969450:CDS 45.0%
TACTGCTGCTGAGAAGAATG+GGG + chr6_4:942339-942358 Msa0969450:CDS 45.0%
!! CTTGGTTTTCTTGGTGGTAG+TGG - chr6_4:942425-942444 None:intergenic 45.0%
CACTACCACCAAGAAAACCA+AGG + chr6_4:942423-942442 Msa0969450:CDS 45.0%
!! TTTGGGAGCCTTGGTTTTCT+TGG - chr6_4:942434-942453 None:intergenic 45.0%
TTCCTGGTAGAGAGTCATGG+AGG + chr6_4:939286-939305 Msa0969450:CDS 50.0%
ATCCTCCATGACTCTCTACC+AGG - chr6_4:939291-939310 None:intergenic 50.0%
GAATCTTCCCACCCTACGAA+AGG - chr6_4:939530-939549 None:intergenic 50.0%
TTTGCAGTTTCCCCTGGTGT+TGG + chr6_4:939627-939646 Msa0969450:CDS 50.0%
TACGGTATGAGCCAACACCA+GGG - chr6_4:939641-939660 None:intergenic 50.0%
TCGGAGAAAGTCCATGCACA+GGG - chr6_4:939734-939753 None:intergenic 50.0%
ATCGGAGAAAGTCCATGCAC+AGG - chr6_4:939735-939754 None:intergenic 50.0%
!! TTTGGTTGGTGAGTCCAGTG+TGG + chr6_4:939797-939816 Msa0969450:intron 50.0%
GAGTCCAGTGTGGTTTGATG+TGG + chr6_4:939807-939826 Msa0969450:intron 50.0%
! TGCCGAGAGAGAGTACGTTA+GGG + chr6_4:939913-939932 Msa0969450:CDS 50.0%
! GAGAGAGAGTACGTTAGGGA+TGG + chr6_4:939917-939936 Msa0969450:CDS 50.0%
!! AGAAGATGATGGGGGAAGCT+GGG + chr6_4:940115-940134 Msa0969450:CDS 50.0%
TCAATCGAAGGCCTAATGCG+AGG - chr6_4:940522-940541 None:intergenic 50.0%
! GTTGTCTGTGCTGTTGTGGA+AGG + chr6_4:940615-940634 Msa0969450:intron 50.0%
! CTGTGCTGTTGTGGAAGGTT+TGG + chr6_4:940620-940639 Msa0969450:intron 50.0%
! TGTGGAAGGTTTGGTTGAGG+GGG + chr6_4:940629-940648 Msa0969450:intron 50.0%
GGTGACATGCAACTGTTGCT+TGG + chr6_4:940898-940917 Msa0969450:CDS 50.0%
TCGAGAAGACTGCATCTGCA+GGG + chr6_4:941124-941143 Msa0969450:CDS 50.0%
TCTGCAGGGGTCATGTTTGA+TGG + chr6_4:941138-941157 Msa0969450:CDS 50.0%
CTCTGTTGTTGTGGGTTCTG+AGG + chr6_4:941325-941344 Msa0969450:intron 50.0%
GGATGTTGCTGAAGAGACAC+CGG + chr6_4:941370-941389 Msa0969450:intron 50.0%
ATGATTCACGATGGCGCCAA+AGG - chr6_4:941612-941631 None:intergenic 50.0%
! GCAGTTTGTGTCTGATGGTG+TGG + chr6_4:941948-941967 Msa0969450:intron 50.0%
TGAATTGGGTGAGGATCCAG+AGG + chr6_4:941984-942003 Msa0969450:CDS 50.0%
TGAGGATCCAGAGGTTGTTG+AGG + chr6_4:941993-942012 Msa0969450:CDS 50.0%
TGTGTCTCCTCAACAACCTC+TGG - chr6_4:942003-942022 None:intergenic 50.0%
GGTCGTGTGTCTGATACATC+TGG + chr6_4:942063-942082 Msa0969450:CDS 50.0%
ACATCCAGGATCCACAGCTA+GGG - chr6_4:942260-942279 None:intergenic 50.0%
! GCTGTAAGTTTGGCGGATGA+TGG + chr6_4:942283-942302 Msa0969450:CDS 50.0%
GCTACTGCTGCTGAGAAGAA+TGG + chr6_4:942337-942356 Msa0969450:CDS 50.0%
CAGATCAAGTTTGGGAGCCT+TGG - chr6_4:942443-942462 None:intergenic 50.0%
CAAGGCTCCCAAACTTGATC+TGG + chr6_4:942441-942460 Msa0969450:CDS 50.0%
GGATCAAGGTGCGTGTGCTT+AGG + chr6_4:939307-939326 Msa0969450:CDS 55.0%
AGGTGCGTGTGCTTAGGATG+TGG + chr6_4:939313-939332 Msa0969450:CDS 55.0%
GGTGCGTGTGCTTAGGATGT+GGG + chr6_4:939314-939333 Msa0969450:CDS 55.0%
CTTCCCACCCTACGAAAGGA+AGG - chr6_4:939526-939545 None:intergenic 55.0%
ACGGTATGAGCCAACACCAG+GGG - chr6_4:939640-939659 None:intergenic 55.0%
GTACGGTATGAGCCAACACC+AGG - chr6_4:939642-939661 None:intergenic 55.0%
! CTGCCGAGAGAGAGTACGTT+AGG + chr6_4:939912-939931 Msa0969450:CDS 55.0%
CAGCTTCCCCCATCATCTTC+TGG - chr6_4:940116-940135 None:intergenic 55.0%
!! CAGAAGATGATGGGGGAAGC+TGG + chr6_4:940114-940133 Msa0969450:CDS 55.0%
!! GAAGATGATGGGGGAAGCTG+GGG + chr6_4:940116-940135 Msa0969450:CDS 55.0%
! GGAAGGATTGCCGGTTGTTG+TGG + chr6_4:940137-940156 Msa0969450:CDS 55.0%
CTAATGCGAGGACCAAGCGA+AGG - chr6_4:940510-940529 None:intergenic 55.0%
CTTCGCTTGGTCCTCGCATT+AGG + chr6_4:940508-940527 Msa0969450:CDS 55.0%
GTTTGGTTGAGGGGGAGGAT+TGG + chr6_4:940637-940656 Msa0969450:CDS 55.0%
ATCCTGCGCGTCGTTGTCAT+AGG + chr6_4:940664-940683 Msa0969450:CDS 55.0%
GTCGAGAAGACTGCATCTGC+AGG + chr6_4:941123-941142 Msa0969450:CDS 55.0%
CGAGAAGACTGCATCTGCAG+GGG + chr6_4:941125-941144 Msa0969450:CDS 55.0%
GTATCAGACACACGACCCAC+TGG - chr6_4:942060-942079 None:intergenic 55.0%
TTTGCAGCAGACCCTAGCTG+TGG + chr6_4:942246-942265 Msa0969450:intron 55.0%
CACATCCAGGATCCACAGCT+AGG - chr6_4:942261-942280 None:intergenic 55.0%
AGCTGTGGATCCTGGATGTG+AGG + chr6_4:942261-942280 Msa0969450:CDS 55.0%
! CGCAAGGCATTTGACGCAGT+TGG + chr6_4:942388-942407 Msa0969450:CDS 55.0%
!! GGGAGCCTTGGTTTTCTTGG+TGG - chr6_4:942431-942450 None:intergenic 55.0%
GCGTGTGCTTAGGATGTGGG+AGG + chr6_4:939317-939336 Msa0969450:CDS 60.0%
CGGTGTGGGCGCAAACTTCT+TGG - chr6_4:939764-939783 None:intergenic 60.0%
! ATGATGGGGGAAGCTGGGGA+AGG + chr6_4:940120-940139 Msa0969450:CDS 60.0%
GGAAGCTGGGGAAGGATTGC+CGG + chr6_4:940128-940147 Msa0969450:CDS 60.0%
! GGAAGGTTTGGTTGAGGGGG+AGG + chr6_4:940632-940651 Msa0969450:intron 60.0%
TGGTTGAGGGGGAGGATTGG+TGG + chr6_4:940640-940659 Msa0969450:CDS 60.0%
CTCCTATGACAACGACGCGC+AGG - chr6_4:940669-940688 None:intergenic 60.0%
TGCTGAAGAGACACCGGCCA+AGG + chr6_4:941376-941395 Msa0969450:intron 60.0%
CAGACCCTAGCTGTGGATCC+TGG + chr6_4:942253-942272 Msa0969450:CDS 60.0%
GCAGTAGCTCCTGACAGGTC+TGG - chr6_4:942325-942344 None:intergenic 60.0%
CAGCAGCAGTAGCTCCTGAC+AGG - chr6_4:942330-942349 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 939252 942468 939252 ID=Msa0969450;Name=Msa0969450
chr6_4 mRNA 939252 942468 939252 ID=Msa0969450-mRNA-1;Parent=Msa0969450;Name=Msa0969450-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|0.9|0.44|0.6|10|0|507
chr6_4 exon 939252 939401 939252 ID=Msa0969450-mRNA-1:exon:466;Parent=Msa0969450-mRNA-1
chr6_4 exon 939588 939804 939588 ID=Msa0969450-mRNA-1:exon:467;Parent=Msa0969450-mRNA-1
chr6_4 exon 939885 939955 939885 ID=Msa0969450-mRNA-1:exon:468;Parent=Msa0969450-mRNA-1
chr6_4 exon 940075 940286 940075 ID=Msa0969450-mRNA-1:exon:469;Parent=Msa0969450-mRNA-1
chr6_4 exon 940470 940555 940470 ID=Msa0969450-mRNA-1:exon:470;Parent=Msa0969450-mRNA-1
chr6_4 exon 940637 940757 940637 ID=Msa0969450-mRNA-1:exon:471;Parent=Msa0969450-mRNA-1
chr6_4 exon 940837 940954 940837 ID=Msa0969450-mRNA-1:exon:472;Parent=Msa0969450-mRNA-1
chr6_4 exon 941057 941227 941057 ID=Msa0969450-mRNA-1:exon:473;Parent=Msa0969450-mRNA-1
chr6_4 exon 941952 942113 941952 ID=Msa0969450-mRNA-1:exon:474;Parent=Msa0969450-mRNA-1
chr6_4 exon 942253 942468 942253 ID=Msa0969450-mRNA-1:exon:475;Parent=Msa0969450-mRNA-1
chr6_4 CDS 939252 939401 939252 ID=Msa0969450-mRNA-1:cds;Parent=Msa0969450-mRNA-1
chr6_4 CDS 939588 939804 939588 ID=Msa0969450-mRNA-1:cds;Parent=Msa0969450-mRNA-1
chr6_4 CDS 939885 939955 939885 ID=Msa0969450-mRNA-1:cds;Parent=Msa0969450-mRNA-1
chr6_4 CDS 940075 940286 940075 ID=Msa0969450-mRNA-1:cds;Parent=Msa0969450-mRNA-1
chr6_4 CDS 940470 940555 940470 ID=Msa0969450-mRNA-1:cds;Parent=Msa0969450-mRNA-1
chr6_4 CDS 940637 940757 940637 ID=Msa0969450-mRNA-1:cds;Parent=Msa0969450-mRNA-1
chr6_4 CDS 940837 940954 940837 ID=Msa0969450-mRNA-1:cds;Parent=Msa0969450-mRNA-1
chr6_4 CDS 941057 941227 941057 ID=Msa0969450-mRNA-1:cds;Parent=Msa0969450-mRNA-1
chr6_4 CDS 941952 942113 941952 ID=Msa0969450-mRNA-1:cds;Parent=Msa0969450-mRNA-1
chr6_4 CDS 942253 942468 942253 ID=Msa0969450-mRNA-1:cds;Parent=Msa0969450-mRNA-1
Gene Sequence

>Msa0969450

ATGGATAAATCCATTGATTGTTTGTGTGATATTGTTCCTGGTAGAGAGTCATGGAGGATCAAGGTGCGTGTGCTTAGGATGTGGGAGGTCCCAACCTTTTTGAAACCTGATCAGGCTAACTCTGTTGAGATGGTTTTGATTGATGAGAAGAAGAAGTTGGTAGAAGGAGGAGTGTACAAGATGTCATACTTTGCAGTTTCCCCTGGTGTTGGCTCATACCGTACTACCATTCATCCATATAAGCTGATATTTCAAATGAAGACAAAGGTGGAGAGGGTTGAGAGTTCACTTATCCCTGTGCATGGACTTTCTCCGATTAAGATCCAAGAAGTTTGCGCCCACACCGCTGATTATGATTATTTGGTTGATGTTGTTGGTTTGATGACTGGGATTTCTGCCGAGAGAGAGTACGTTAGGGATGGAAAGGTTACTAAGATGGTTGAGTGTGCGTTGTTTGGAAGCTATGTTGATTCTCTCCAGAAGATGATGGGGGAAGCTGGGGAAGGATTGCCGGTTGTTGTGGTTCAATTTGCGAAAATTAAAATATTCCGAGGTATAAATTTTCTGTCCTGTTTGCCTGTTTATTTGCATTTTGTAATTTATGGGTCAAGCTTATCTGTTTATATGCAGAGAGGGTCTCTATGTAGAATTGTTGCAATCCATGGCATTGAACCTTCTAGTGTTGTTCCTTCGCTTGGTCCTCGCATTAGGCCTTCGATTGAAGAGGATTTCTTGCGTTTGGTTGAGGGGGAGGATTGGTGGTATCCTGCGCGTCGTTGTCATAGGAGTGTTACTCCTGATTCTGGTGCATATTACTGCAAGGGGTGTGTGAAGCATGTGTTCCATATGGTTCCAAGGTATAAGGTGAAGCTCAGTGTGAGAGATTCTACATCAGATGCAGTGTTTGTGATGTTTGATGGTGACATGCAACTGTTGCTTGGTGAGCAGTGTAGCGACTTAGTTTCTGCAGCCAAAGCTGAAAATGCTGGATTTTATCCTCCTGAGATTGTTAGTTTGAAGGGAAGGATGATGTTGTTTAAGGTCGAGAAGACTGCATCTGCAGGGGTCATGTTTGATGGATCTTATAGGGTGAAGAGGGTTTGTGTTGATCCATCTATTGTTGAGGAATTCTGCACTTCTGTCAAGTTTGTGTCTGATGGTGTGGATGCTGAGTTGAGTGAATTGGGTGAGGATCCAGAGGTTGTTGAGGAGACACAAATTGAGGATTTCGTGGCTAATGTTGTTGTTACTCCAGTGGGTCGTGTGTCTGATACATCTGGGTATGAAAATACTGCTCCAGTTCTTAAGCAGACCCTAGCTGTGGATCCTGGATGTGAGGCTGTAAGTTTGGCGGATGATGGTACTGTCTTTAAAAGTCCAGACCTGTCAGGAGCTACTGCTGCTGAGAAGAATGGGGCTGTCAACAAAGCTAAGAGAAATTTGCGCAAGGCATTTGACGCAGTTGGTCGTGACAAGTCCACTACCACCAAGAAAACCAAGGCTCCCAAACTTGATCTGGATTGA

Protein sequence

>Msa0969450

MDKSIDCLCDIVPGRESWRIKVRVLRMWEVPTFLKPDQANSVEMVLIDEKKKLVEGGVYKMSYFAVSPGVGSYRTTIHPYKLIFQMKTKVERVESSLIPVHGLSPIKIQEVCAHTADYDYLVDVVGLMTGISAEREYVRDGKVTKMVECALFGSYVDSLQKMMGEAGEGLPVVVVQFAKIKIFRGINFLSCLPVYLHFVIYGSSLSVYMQRGSLCRIVAIHGIEPSSVVPSLGPRIRPSIEEDFLRLVEGEDWWYPARRCHRSVTPDSGAYYCKGCVKHVFHMVPRYKVKLSVRDSTSDAVFVMFDGDMQLLLGEQCSDLVSAAKAENAGFYPPEIVSLKGRMMLFKVEKTASAGVMFDGSYRVKRVCVDPSIVEEFCTSVKFVSDGVDAELSELGEDPEVVEETQIEDFVANVVVTPVGRVSDTSGYENTAPVLKQTLAVDPGCEAVSLADDGTVFKSPDLSGATAAEKNGAVNKAKRNLRKAFDAVGRDKSTTTKKTKAPKLDLD*