Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1103480 | XP_024627337.1 | 96.141 | 622 | 24 | 0 | 3 | 624 | 4 | 625 | 0.0 | 1209 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1103480 | sp|Q8W4C3|PARNL_ARATH | 50.977 | 614 | 277 | 12 | 21 | 624 | 19 | 618 | 0.0 | 618 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1103480 | A0A396GX24 | 96.141 | 622 | 24 | 0 | 3 | 624 | 4 | 625 | 0.0 | 1209 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0056520 | Msa1103480 | 0.834152 | 3.535505e-56 | -8.615850e-47 |
| Msa0056690 | Msa1103480 | 0.829752 | 4.316476e-55 | -8.615850e-47 |
| Msa0632870 | Msa1103480 | 0.801079 | 1.066595e-48 | -8.615850e-47 |
| Msa0661240 | Msa1103480 | 0.803179 | 3.943326e-49 | -8.615850e-47 |
| Msa0705420 | Msa1103480 | 0.806953 | 6.404857e-50 | -8.615850e-47 |
| Msa0142420 | Msa1103480 | 0.803635 | 3.173699e-49 | -8.615850e-47 |
| Msa0390060 | Msa1103480 | 0.826000 | 3.448044e-54 | -8.615850e-47 |
| Msa1018650 | Msa1103480 | 0.846358 | 2.283675e-59 | -8.615850e-47 |
| Msa1051200 | Msa1103480 | 0.800244 | 1.578071e-48 | -8.615850e-47 |
| Msa1103480 | Msa1111630 | 0.814300 | 1.652416e-51 | -8.615850e-47 |
| Msa1103480 | Msa1167170 | 0.801763 | 7.723518e-49 | -8.615850e-47 |
| Msa1103480 | Msa1314630 | 0.800783 | 1.225716e-48 | -8.615850e-47 |
| Msa1103480 | Msa1398800 | 0.804316 | 2.290396e-49 | -8.615850e-47 |
| Msa0241620 | Msa1103480 | 0.823363 | 1.442115e-53 | -8.615850e-47 |
| Msa0267310 | Msa1103480 | 0.801087 | 1.062115e-48 | -8.615850e-47 |
| Msa0333730 | Msa1103480 | 0.806155 | 9.438060e-50 | -8.615850e-47 |
| Msa0358170 | Msa1103480 | 0.817306 | 3.531788e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1103480 | MtrunA17_Chr7g0234031 | 96.141 | 622 | 24 | 0 | 3 | 624 | 4 | 625 | 0.0 | 1209 |
| Msa1103480 | MtrunA17_Chr3g0102481 | 31.200 | 625 | 357 | 22 | 24 | 588 | 35 | 646 | 1.26e-74 | 252 |
| Msa1103480 | MtrunA17_Chr7g0234011 | 89.796 | 49 | 5 | 0 | 576 | 624 | 1 | 49 | 1.66e-24 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1103480 | AT3G25430.1 | 50.977 | 614 | 277 | 12 | 21 | 624 | 19 | 618 | 0.0 | 618 |
| Msa1103480 | AT3G25430.2 | 49.837 | 614 | 267 | 14 | 21 | 624 | 19 | 601 | 0.0 | 587 |
| Msa1103480 | AT1G55870.1 | 28.013 | 614 | 380 | 17 | 28 | 591 | 38 | 639 | 1.03e-64 | 226 |
| Msa1103480 | AT1G55870.4 | 23.371 | 445 | 286 | 14 | 191 | 591 | 22 | 455 | 1.29e-21 | 99.0 |
| Msa1103480 | AT1G55870.2 | 23.620 | 326 | 212 | 10 | 300 | 591 | 7 | 329 | 1.42e-15 | 79.3 |
| Msa1103480 | AT1G55870.3 | 23.620 | 326 | 212 | 10 | 300 | 591 | 7 | 329 | 1.42e-15 | 79.3 |
Find 136 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCCCACAATTGCCTTAA+TGG | 0.109587 | 7_3:+39354096 | Msa1103480:CDS |
| TAATGAATGGTGAACAAATT+AGG | 0.156646 | 7_3:+39355202 | Msa1103480:CDS |
| TTGATGGACTTGATGCTTTA+AGG | 0.173384 | 7_3:+39354809 | Msa1103480:CDS |
| GCGAACATTTAGTATTCTTA+TGG | 0.202673 | 7_3:+39355025 | Msa1103480:CDS |
| CCATTTCGAAGAGGAGATTT+TGG | 0.227102 | 7_3:-39348920 | None:intergenic |
| CCTCATTACATGATGATTCT+TGG | 0.232979 | 7_3:-39354963 | None:intergenic |
| TCATTACACCATTGAATATC+TGG | 0.240381 | 7_3:-39355387 | None:intergenic |
| TCCCCTGTTGTAACTGAATC+TGG | 0.277696 | 7_3:+39354874 | Msa1103480:CDS |
| ACAAATTAGGGGAGGCTTAA+AGG | 0.282525 | 7_3:+39355215 | Msa1103480:CDS |
| GCAGAGCTTCATAAATAAAT+AGG | 0.283554 | 7_3:-39354836 | None:intergenic |
| ACATGATGATTCTTGGATAT+TGG | 0.284924 | 7_3:-39354956 | None:intergenic |
| AATGAATGGTGAACAAATTA+GGG | 0.285788 | 7_3:+39355203 | Msa1103480:CDS |
| GCAGAGAGAGCTTCGTAGTT+TGG | 0.293322 | 7_3:+39353999 | Msa1103480:intron |
| TAATTCACGTCAAGTACTTT+GGG | 0.319196 | 7_3:-39354299 | None:intergenic |
| CGAACATTTAGTATTCTTAT+GGG | 0.319953 | 7_3:+39355026 | Msa1103480:CDS |
| TCACTAATGTATTCCATTCA+TGG | 0.322191 | 7_3:+39354929 | Msa1103480:CDS |
| ACGAACTTATCAACTCTATT+AGG | 0.324056 | 7_3:+39353327 | Msa1103480:CDS |
| TTCTTATGGGGATTTAAGTT+TGG | 0.329233 | 7_3:+39355039 | Msa1103480:CDS |
| ATTTAAGAGAAACACCATTA+AGG | 0.335367 | 7_3:-39354110 | None:intergenic |
| TCAGTTGCTAAAATTCGTTT+AGG | 0.343479 | 7_3:+39353081 | Msa1103480:CDS |
| TCAAATTTCTAATACAATCT+TGG | 0.351674 | 7_3:+39355523 | Msa1103480:three_prime_UTR |
| TCAGATGGCTTGAGGGTAAC+AGG | 0.369171 | 7_3:+39355246 | Msa1103480:CDS |
| GTCGTTACCGTTTCGTTCCT+GGG | 0.376492 | 7_3:-39348829 | None:intergenic |
| AGGCAATTGTGGGAGATAAC+AGG | 0.379316 | 7_3:-39354090 | None:intergenic |
| TGAGTTGTCCCACCCTTTGA+AGG | 0.384074 | 7_3:-39353852 | None:intergenic |
| ATAATTCACGTCAAGTACTT+TGG | 0.385285 | 7_3:-39354300 | None:intergenic |
| TTTAGCAACCATGGCTCGCC+AGG | 0.389633 | 7_3:+39351916 | Msa1103480:CDS |
| TTAGAATCTGTAACAGAAAA+CGG | 0.390626 | 7_3:-39349162 | None:intergenic |
| CATTGAAATGGCGATAAAAT+CGG | 0.396428 | 7_3:-39349013 | None:intergenic |
| CCAAAATCTCCTCTTCGAAA+TGG | 0.398756 | 7_3:+39348920 | Msa1103480:CDS |
| GCCATTTCAATGGAGAAAAC+TGG | 0.400832 | 7_3:+39349024 | Msa1103480:CDS |
| GGGACCAGTTCTCCATCTCT+TGG | 0.412577 | 7_3:+39353102 | Msa1103480:CDS |
| CCTGCAGAATTAGTTGTACT+TGG | 0.413504 | 7_3:-39353418 | None:intergenic |
| TTTCCAGATTCAGTTACAAC+AGG | 0.423154 | 7_3:-39354877 | None:intergenic |
| CAGTTGCTAAAATTCGTTTA+GGG | 0.424512 | 7_3:+39353082 | Msa1103480:CDS |
| GTAAACAAAGGCAAGATTGA+TGG | 0.426061 | 7_3:+39354793 | Msa1103480:CDS |
| AGAGTTTGATGTTAAATTTG+TGG | 0.426743 | 7_3:+39355119 | Msa1103480:CDS |
| CTCTATTAGGAATATTATCT+CGG | 0.434602 | 7_3:+39353340 | Msa1103480:CDS |
| CTAATACAATCTTGGAAGGT+AGG | 0.440804 | 7_3:+39355531 | Msa1103480:three_prime_UTR |
| CCAAGCTTTAACTCATCCCT+TGG | 0.445293 | 7_3:-39351757 | None:intergenic |
| AGAAACCAACTTCAAAGAAT+AGG | 0.454035 | 7_3:-39355450 | None:intergenic |
| TTGTAGTGATTCGTTGAAGT+TGG | 0.456543 | 7_3:-39348965 | None:intergenic |
| CAATGTGCAGGCTAGGTTTG+TGG | 0.457194 | 7_3:+39355286 | Msa1103480:CDS |
| ACTAACCTATTCTTTGAAGT+TGG | 0.458539 | 7_3:+39355445 | Msa1103480:three_prime_UTR |
| TCAGGAATTTCCATGTCAAC+TGG | 0.458988 | 7_3:-39354404 | None:intergenic |
| TAGCCTGCACATTGTTCTAT+AGG | 0.460478 | 7_3:-39355277 | None:intergenic |
| ACTCATCCCTTGGAAACAAA+AGG | 0.460655 | 7_3:-39351747 | None:intergenic |
| TTGTAACTGAATCTGGAAAC+AGG | 0.460764 | 7_3:+39354881 | Msa1103480:CDS |
| GACGAAATCAAGGGAAGATA+AGG | 0.461726 | 7_3:+39353893 | Msa1103480:CDS |
| TAGTGAAGTCTTCAAGCTGC+GGG | 0.465390 | 7_3:-39354912 | None:intergenic |
| AATGTGCAGGCTAGGTTTGT+GGG | 0.466640 | 7_3:+39355287 | Msa1103480:CDS |
| CCAAGGGATGAGTTAAAGCT+TGG | 0.476563 | 7_3:+39351757 | Msa1103480:CDS |
| AAGGGAAGATAAGGAAGTGT+TGG | 0.481799 | 7_3:+39353902 | Msa1103480:CDS |
| TCCTTTAGTGATACCTTCAA+AGG | 0.482612 | 7_3:+39353839 | Msa1103480:CDS |
| TGATGAGTTAGTTCTTATGT+TGG | 0.483123 | 7_3:+39355595 | Msa1103480:three_prime_UTR |
| AGAAAATCTTTCGACAAGCC+AGG | 0.486512 | 7_3:-39355174 | None:intergenic |
| AATTATTTAATGAAGAAAAG+TGG | 0.491395 | 7_3:+39354317 | Msa1103480:CDS |
| TAGAATCTGTAACAGAAAAC+GGG | 0.495933 | 7_3:-39349161 | None:intergenic |
| AAAATCGGAATTTGAGATGT+GGG | 0.504585 | 7_3:-39348998 | None:intergenic |
| AAAGAAAACCAGATATTCAA+TGG | 0.505454 | 7_3:+39355379 | Msa1103480:CDS |
| CCCTTTGAAGGTATCACTAA+AGG | 0.507634 | 7_3:-39353840 | None:intergenic |
| GGGATTTAAGTTTGGTATGA+CGG | 0.507878 | 7_3:+39355047 | Msa1103480:CDS |
| AGAGCTTCGTAGTTTGGAAG+AGG | 0.509654 | 7_3:+39354005 | Msa1103480:CDS |
| AAAAGATGTCATGGGATTCA+CGG | 0.510431 | 7_3:-39355092 | None:intergenic |
| TAGAGTGACTGACCTTGGTC+AGG | 0.512388 | 7_3:-39354422 | None:intergenic |
| GGAAGATAAGGAAGTGTTGG+AGG | 0.514275 | 7_3:+39353905 | Msa1103480:CDS |
| CCGTGTTCAGCCTTTCGATA+CGG | 0.514865 | 7_3:+39349071 | Msa1103480:CDS |
| TTTCCTTGCACCAGTTGACA+TGG | 0.515522 | 7_3:+39354394 | Msa1103480:CDS |
| GAGGAGAGCAAGAAAATTCG+TGG | 0.517305 | 7_3:+39354027 | Msa1103480:CDS |
| GGCACAAAGACAAGCAAAGA+TGG | 0.518205 | 7_3:+39353225 | Msa1103480:CDS |
| GGATATTGGCTGACCATGAA+TGG | 0.518944 | 7_3:-39354942 | None:intergenic |
| AAACACCATTAAGGCAATTG+TGG | 0.519144 | 7_3:-39354101 | None:intergenic |
| CACACCAAGAGATGGAGAAC+TGG | 0.519694 | 7_3:-39353106 | None:intergenic |
| GTTAGTATCAGATGGCTTGA+GGG | 0.525107 | 7_3:+39355239 | Msa1103480:CDS |
| TTCAATGCTTGCATATATGA+AGG | 0.529591 | 7_3:+39351947 | Msa1103480:CDS |
| AACACCATTAAGGCAATTGT+GGG | 0.530873 | 7_3:-39354100 | None:intergenic |
| CCTTTAGTGATACCTTCAAA+GGG | 0.533128 | 7_3:+39353840 | Msa1103480:CDS |
| TCTATTAGGAATATTATCTC+GGG | 0.533273 | 7_3:+39353341 | Msa1103480:CDS |
| TATAGAACAATGTGCAGGCT+AGG | 0.534054 | 7_3:+39355279 | Msa1103480:CDS |
| TTTAAGTTTGGTATGACGGC+CGG | 0.534305 | 7_3:+39355051 | Msa1103480:CDS |
| TGAGTCTTTAGAGAAAACTT+TGG | 0.537621 | 7_3:+39355323 | Msa1103480:CDS |
| TTAAAGGAGTTAGTATCAGA+TGG | 0.539930 | 7_3:+39355231 | Msa1103480:CDS |
| AGTTAGTATCAGATGGCTTG+AGG | 0.540985 | 7_3:+39355238 | Msa1103480:CDS |
| ATCAAAACCCTGGCGAGCCA+TGG | 0.542440 | 7_3:-39351924 | None:intergenic |
| ACAAATTCATCTACTTCTGA+TGG | 0.547780 | 7_3:-39354254 | None:intergenic |
| GGATAAAGCATTACGGATGT+TGG | 0.549068 | 7_3:-39354357 | None:intergenic |
| TCACGTAGGATAAAGCATTA+CGG | 0.549902 | 7_3:-39354364 | None:intergenic |
| CCAAGAATCATCATGTAATG+AGG | 0.553565 | 7_3:+39354963 | Msa1103480:CDS |
| TTTGTTCATTGCAAAGAACC+AGG | 0.556051 | 7_3:+39355477 | Msa1103480:three_prime_UTR |
| CCAAGTACAACTAATTCTGC+AGG | 0.562621 | 7_3:+39353418 | Msa1103480:CDS |
| TTAAATCACGGATTAAACAT+TGG | 0.562775 | 7_3:+39353181 | Msa1103480:CDS |
| GCAGAATTAGTTGTACTTGG+CGG | 0.562812 | 7_3:-39353415 | None:intergenic |
| GATTTCATCACACCAAGAGA+TGG | 0.563913 | 7_3:-39353114 | None:intergenic |
| AACGACGCCGTATCAATCAA+TGG | 0.564733 | 7_3:+39348846 | Msa1103480:exon |
| GCTTCGTAGTTTGGAAGAGG+AGG | 0.565174 | 7_3:+39354008 | Msa1103480:CDS |
| ATTTCTAATACAATCTTGGA+AGG | 0.570719 | 7_3:+39355527 | Msa1103480:three_prime_UTR |
| TAAAATCGGAATTTGAGATG+TGG | 0.574945 | 7_3:-39348999 | None:intergenic |
| GCGGTTTCCGCCGTATCGAA+AGG | 0.578248 | 7_3:-39349081 | None:intergenic |
| GATAACAGGTTTCTCTGAAG+CGG | 0.580771 | 7_3:-39354076 | None:intergenic |
| TAATGACAATGTAATCAACT+TGG | 0.583935 | 7_3:+39355404 | Msa1103480:CDS |
| TCATCTACTTCTGATGGCAG+TGG | 0.586518 | 7_3:-39354248 | None:intergenic |
| GAAGAAACCATTGATTGATA+CGG | 0.588364 | 7_3:-39348853 | None:intergenic |
| TAGTGATACCTTCAAAGGGT+GGG | 0.589465 | 7_3:+39353844 | Msa1103480:CDS |
| GACGTCTCATTTAGCAACCA+TGG | 0.593276 | 7_3:+39351907 | Msa1103480:CDS |
| AATTCACGTCAAGTACTTTG+GGG | 0.595533 | 7_3:-39354298 | None:intergenic |
| ACTGTATCAGCAACAGTAGG+AGG | 0.595952 | 7_3:-39353144 | None:intergenic |
| AGACCTATAGAACAATGTGC+AGG | 0.600482 | 7_3:+39355274 | Msa1103480:CDS |
| TTTCCATGTCAACTGGTGCA+AGG | 0.600930 | 7_3:-39354397 | None:intergenic |
| CTGACTAGCTTTCAGATAAG+CGG | 0.602446 | 7_3:-39349100 | None:intergenic |
| TTATTGAGAGGATTAAATCA+CGG | 0.609074 | 7_3:+39353169 | Msa1103480:CDS |
| GAACATTTAGTATTCTTATG+GGG | 0.610130 | 7_3:+39355027 | Msa1103480:CDS |
| TTCAAAGGGTGGGACAACTC+AGG | 0.613877 | 7_3:+39353854 | Msa1103480:CDS |
| AAAACTGTATCAGCAACAGT+AGG | 0.616660 | 7_3:-39353147 | None:intergenic |
| AAAGGCTGAACACGGTGCCA+CGG | 0.617100 | 7_3:-39349063 | None:intergenic |
| TTAGCAACCATGGCTCGCCA+GGG | 0.627817 | 7_3:+39351917 | Msa1103480:CDS |
| TTAGTGAAGTCTTCAAGCTG+CGG | 0.630352 | 7_3:-39354913 | None:intergenic |
| TTAGTGATACCTTCAAAGGG+TGG | 0.631806 | 7_3:+39353843 | Msa1103480:CDS |
| TTCCAGATTCAGTTACAACA+GGG | 0.631847 | 7_3:-39354876 | None:intergenic |
| CCGTATCGAAAGGCTGAACA+CGG | 0.633989 | 7_3:-39349071 | None:intergenic |
| AAGCATTGAAATCAAAACCC+TGG | 0.640258 | 7_3:-39351934 | None:intergenic |
| GAAAATTCGTGGATTTCGAG+AGG | 0.643910 | 7_3:+39354038 | Msa1103480:CDS |
| TCCAGATTCAGTTACAACAG+GGG | 0.656149 | 7_3:-39354875 | None:intergenic |
| AATGGTGAACAAATTAGGGG+AGG | 0.671629 | 7_3:+39355207 | Msa1103480:CDS |
| GAGAACACTCTTCAACATGC+CGG | 0.675481 | 7_3:-39355070 | None:intergenic |
| TGTTCAGCCTTTCGATACGG+CGG | 0.686181 | 7_3:+39349074 | Msa1103480:CDS |
| GACATGGAAATTCCTGACCA+AGG | 0.695626 | 7_3:+39354410 | Msa1103480:CDS |
| GTTCTTCTTCAACAACTCCG+TGG | 0.697909 | 7_3:+39349046 | Msa1103480:CDS |
| AAGAAGCTGAAACCGCTGAG+CGG | 0.698109 | 7_3:-39349124 | None:intergenic |
| CAAACATCTACATTCAAGCA+CGG | 0.698523 | 7_3:-39353386 | None:intergenic |
| AGGTTCCCAGAAAACAACAA+AGG | 0.699882 | 7_3:-39355154 | None:intergenic |
| AGTGAAGTCTTCAAGCTGCG+GGG | 0.709580 | 7_3:-39354911 | None:intergenic |
| ATGAATGGTGAACAAATTAG+GGG | 0.710267 | 7_3:+39355204 | Msa1103480:CDS |
| AAGCTAGTCAGTCCGCTCAG+CGG | 0.720589 | 7_3:+39349112 | Msa1103480:CDS |
| GTAATGAGGATGTTAGTGTG+TGG | 0.752981 | 7_3:+39354977 | Msa1103480:CDS |
| AAGGAAATGAGTATTCACGT+AGG | 0.765521 | 7_3:-39354378 | None:intergenic |
| GAACTCACGGATGAGCAACG+AGG | 0.774856 | 7_3:-39349188 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAATAATCAACTAAAAAAA+CGG | - | chr7_3:39349235-39349254 | None:intergenic | 15.0% |
| !! | TGAATAAAATTGTAAAAATG+TGG | + | chr7_3:39349772-39349791 | Msa1103480:intron | 15.0% |
| !!! | TATAATATCATCAGTTTTAT+AGG | + | chr7_3:39350077-39350096 | Msa1103480:intron | 15.0% |
| !!! | TTTTTCAAGTATATTCAAAA+AGG | - | chr7_3:39350327-39350346 | None:intergenic | 15.0% |
| !! | TTAGTTTCTCAAATTATTAT+TGG | - | chr7_3:39350544-39350563 | None:intergenic | 15.0% |
| !!! | TTTATTTATTGCTACTTTTT+GGG | + | chr7_3:39350849-39350868 | Msa1103480:intron | 15.0% |
| !!! | AAATCTTCAATATGAATTTT+CGG | + | chr7_3:39351360-39351379 | Msa1103480:intron | 15.0% |
| !! | ATTTGTGATTATTAGAAATT+AGG | - | chr7_3:39351523-39351542 | None:intergenic | 15.0% |
| !! | AATTAAGTACTAGAAAAATT+TGG | - | chr7_3:39351671-39351690 | None:intergenic | 15.0% |
| !! | AATTATTTAATGAAGAAAAG+TGG | + | chr7_3:39354317-39354336 | Msa1103480:CDS | 15.0% |
| !! | TGTGAATCATAGTATTAATT+AGG | + | chr7_3:39349274-39349293 | Msa1103480:intron | 20.0% |
| !!! | GTTTTTTTTTATAGTTCGTT+CGG | - | chr7_3:39349405-39349424 | None:intergenic | 20.0% |
| !!! | AGATATTACATATTTTTTGC+AGG | + | chr7_3:39349482-39349501 | Msa1103480:intron | 20.0% |
| !! | AAAAAAAAACAAAGATGAGT+TGG | + | chr7_3:39349615-39349634 | Msa1103480:intron | 20.0% |
| !! | AAAAAAAACAAAGATGAGTT+GGG | + | chr7_3:39349616-39349635 | Msa1103480:intron | 20.0% |
| !!! | TCTTTAAGGTTTATTCAAAA+TGG | - | chr7_3:39349961-39349980 | None:intergenic | 20.0% |
| !!! | GTTTATTTATTGCTACTTTT+TGG | + | chr7_3:39350848-39350867 | Msa1103480:intron | 20.0% |
| !!! | CCTTATGTTAAATATTTTCT+AGG | - | chr7_3:39351223-39351242 | None:intergenic | 20.0% |
| !! | CCTAGAAAATATTTAACATA+AGG | + | chr7_3:39351220-39351239 | Msa1103480:intron | 20.0% |
| !!! | ATGAATTTTCGAATTTTCAT+TGG | + | chr7_3:39351414-39351433 | Msa1103480:intron | 20.0% |
| !!! | TTTTTACATTCACAAGAATA+AGG | - | chr7_3:39351487-39351506 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTATGGTTCTAAT+GGG | + | chr7_3:39351994-39352013 | Msa1103480:intron | 20.0% |
| !!! | ATTTTAAAGTAACTATTACC+AGG | + | chr7_3:39352026-39352045 | Msa1103480:intron | 20.0% |
| !! | GAATTTCTGTGAAATTTATT+TGG | + | chr7_3:39352181-39352200 | Msa1103480:intron | 20.0% |
| !! | TAAATATCTGTTTAAGTGTT+TGG | + | chr7_3:39352261-39352280 | Msa1103480:intron | 20.0% |
| !! | AATGAGTGATAAAGAATAAA+AGG | - | chr7_3:39353299-39353318 | None:intergenic | 20.0% |
| !! | TAATTTGATTGATACAACTT+TGG | + | chr7_3:39353472-39353491 | Msa1103480:intron | 20.0% |
| !! | AATTTGATTGATACAACTTT+GGG | + | chr7_3:39353473-39353492 | Msa1103480:intron | 20.0% |
| !! | TACATAAATAAATCAAACCA+GGG | - | chr7_3:39354195-39354214 | None:intergenic | 20.0% |
| !! | ATGTTGACAGAAATTATTAA+AGG | - | chr7_3:39354710-39354729 | None:intergenic | 20.0% |
| !!! | ATTTGCTTTTCTTGTATTAT+TGG | - | chr7_3:39355004-39355023 | None:intergenic | 20.0% |
| !!! | GATTTTCTAAATGTAATGAA+TGG | + | chr7_3:39355189-39355208 | Msa1103480:CDS | 20.0% |
| !! | TCAAATTTCTAATACAATCT+TGG | + | chr7_3:39355523-39355542 | Msa1103480:three_prime_UTR | 20.0% |
| ! | TTAGAATCTGTAACAGAAAA+CGG | - | chr7_3:39349165-39349184 | None:intergenic | 25.0% |
| !! | TATCTAAAGTTTAGATGAGT+TGG | + | chr7_3:39349317-39349336 | Msa1103480:intron | 25.0% |
| !! | ATCTAAAGTTTAGATGAGTT+GGG | + | chr7_3:39349318-39349337 | Msa1103480:intron | 25.0% |
| !!! | TACATATTTTTTGCAGGTTT+CGG | + | chr7_3:39349488-39349507 | Msa1103480:intron | 25.0% |
| !! | CAAATGTTAGTCATTTCTTT+TGG | - | chr7_3:39349582-39349601 | None:intergenic | 25.0% |
| !! | GTTTTACACTGAGATTTAAT+TGG | + | chr7_3:39349834-39349853 | Msa1103480:intron | 25.0% |
| ! | ATGTACTTAAGTTAAGTCTA+CGG | - | chr7_3:39350016-39350035 | None:intergenic | 25.0% |
| ! | AACATTAAGACTTTGTTAGT+GGG | - | chr7_3:39350213-39350232 | None:intergenic | 25.0% |
| ! | TATAATGTTAGTTACAAGAG+TGG | + | chr7_3:39350722-39350741 | Msa1103480:intron | 25.0% |
| ! | ATAATGTTAGTTACAAGAGT+GGG | + | chr7_3:39350723-39350742 | Msa1103480:intron | 25.0% |
| ! | TTTGTTTGAGTAGTGATATT+TGG | + | chr7_3:39350930-39350949 | Msa1103480:intron | 25.0% |
| ! | AATAAGAAGAGAGAAAAAGA+AGG | - | chr7_3:39350986-39351005 | None:intergenic | 25.0% |
| !! | TTCTTTTTCTCTCTTCTTAT+TGG | + | chr7_3:39350985-39351004 | Msa1103480:intron | 25.0% |
| ! | AAAACAATAGAGAGAGAAAA+AGG | + | chr7_3:39351010-39351029 | Msa1103480:intron | 25.0% |
| ! | ATGAGTATGTATAAAACCTA+TGG | - | chr7_3:39351084-39351103 | None:intergenic | 25.0% |
| ! | TTGAACATGTACCTAAAAAT+TGG | + | chr7_3:39351160-39351179 | Msa1103480:intron | 25.0% |
| ! | TAGTAGTGTTAAACTGTTAA+CGG | - | chr7_3:39351271-39351290 | None:intergenic | 25.0% |
| ! | ATTCATATTGAAGATTTGTC+TGG | - | chr7_3:39351357-39351376 | None:intergenic | 25.0% |
| !! | TTTTAAACAACAAATAGTCC+AGG | - | chr7_3:39351602-39351621 | None:intergenic | 25.0% |
| !!! | ATAATTTCCTTTTGTTTCCA+AGG | + | chr7_3:39351740-39351759 | Msa1103480:CDS | 25.0% |
| !!! | TAATTTCCTTTTGTTTCCAA+GGG | + | chr7_3:39351741-39351760 | Msa1103480:CDS | 25.0% |
| !!! | GTACTTTGTGTTTTTGTTTA+TGG | + | chr7_3:39351984-39352003 | Msa1103480:intron | 25.0% |
| !!! | GTTTTTGTTTATGGTTCTAA+TGG | + | chr7_3:39351993-39352012 | Msa1103480:intron | 25.0% |
| !!! | CTTATTTTCATAAGCTTTGT+AGG | + | chr7_3:39352330-39352349 | Msa1103480:intron | 25.0% |
| !!! | CTTATAAGTTGTTTCTCTAA+TGG | - | chr7_3:39352414-39352433 | None:intergenic | 25.0% |
| ! | AGTGTTACATTTATCTTCTA+CGG | + | chr7_3:39352497-39352516 | Msa1103480:intron | 25.0% |
| !! | AATGTTGTTTGTTTCCAATA+TGG | + | chr7_3:39352603-39352622 | Msa1103480:intron | 25.0% |
| !! | TTTCTTCAAAGTATCCATAT+TGG | - | chr7_3:39352620-39352639 | None:intergenic | 25.0% |
| !! | AATATGGATACTTTGAAGAA+AGG | + | chr7_3:39352619-39352638 | Msa1103480:intron | 25.0% |
| ! | TGAGTCAGTAAAAACTAAAT+TGG | + | chr7_3:39352740-39352759 | Msa1103480:intron | 25.0% |
| ! | AAAGGTGAAAAAGAAAAAGA+AGG | + | chr7_3:39352798-39352817 | Msa1103480:intron | 25.0% |
| ! | AAATCACTACTTTGAATTCA+TGG | - | chr7_3:39352860-39352879 | None:intergenic | 25.0% |
| !!! | TTCTAAAACATTTTCGTATG+TGG | - | chr7_3:39352920-39352939 | None:intergenic | 25.0% |
| ! | TTATTGAGAGGATTAAATCA+CGG | + | chr7_3:39353169-39353188 | Msa1103480:CDS | 25.0% |
| !! | TTAAATCACGGATTAAACAT+TGG | + | chr7_3:39353181-39353200 | Msa1103480:CDS | 25.0% |
| ! | AGAAATACATGTAAAAACTC+AGG | + | chr7_3:39353204-39353223 | Msa1103480:CDS | 25.0% |
| ! | AAAGATGGTAAGAAAATCTT+TGG | + | chr7_3:39353240-39353259 | Msa1103480:intron | 25.0% |
| !! | TGTACAATGAGATTTTTCTT+AGG | + | chr7_3:39353269-39353288 | Msa1103480:intron | 25.0% |
| ! | CTCTATTAGGAATATTATCT+CGG | + | chr7_3:39353340-39353359 | Msa1103480:CDS | 25.0% |
| ! | TCTATTAGGAATATTATCTC+GGG | + | chr7_3:39353341-39353360 | Msa1103480:CDS | 25.0% |
| ! | TATACATGCACTTAATTAAG+CGG | - | chr7_3:39353514-39353533 | None:intergenic | 25.0% |
| !!! | GTTATTTTCATAATCTCTTC+AGG | - | chr7_3:39353612-39353631 | None:intergenic | 25.0% |
| ! | AATCACTTGTGATATTGTTT+GGG | - | chr7_3:39353671-39353690 | None:intergenic | 25.0% |
| ! | TAATCACTTGTGATATTGTT+TGG | - | chr7_3:39353672-39353691 | None:intergenic | 25.0% |
| ! | ATTTAAGAGAAACACCATTA+AGG | - | chr7_3:39354113-39354132 | None:intergenic | 25.0% |
| ! | TTAATGGTGTTTCTCTTAAA+TGG | + | chr7_3:39354112-39354131 | Msa1103480:intron | 25.0% |
| ! | CTACATAAATAAATCAAACC+AGG | - | chr7_3:39354196-39354215 | None:intergenic | 25.0% |
| ! | CAAAATTCTGCAAGTTATAA+AGG | - | chr7_3:39354540-39354559 | None:intergenic | 25.0% |
| ! | CATATACACAGTTAATACAT+CGG | - | chr7_3:39354638-39354657 | None:intergenic | 25.0% |
| ! | TAAGAACAAAACTTCGTATT+CGG | - | chr7_3:39354685-39354704 | None:intergenic | 25.0% |
| ! | TGAAAACAACAAAAACAGAA+AGG | - | chr7_3:39354767-39354786 | None:intergenic | 25.0% |
| !! | TTTTCAGATACAGTAAACAA+AGG | + | chr7_3:39354781-39354800 | Msa1103480:intron | 25.0% |
| ! | CGAACATTTAGTATTCTTAT+GGG | + | chr7_3:39355026-39355045 | Msa1103480:CDS | 25.0% |
| ! | GAACATTTAGTATTCTTATG+GGG | + | chr7_3:39355027-39355046 | Msa1103480:CDS | 25.0% |
| ! | AGAGTTTGATGTTAAATTTG+TGG | + | chr7_3:39355119-39355138 | Msa1103480:CDS | 25.0% |
| ! | TAATGAATGGTGAACAAATT+AGG | + | chr7_3:39355202-39355221 | Msa1103480:CDS | 25.0% |
| ! | AATGAATGGTGAACAAATTA+GGG | + | chr7_3:39355203-39355222 | Msa1103480:CDS | 25.0% |
| ! | AAAGAAAACCAGATATTCAA+TGG | + | chr7_3:39355379-39355398 | Msa1103480:CDS | 25.0% |
| ! | TAATGACAATGTAATCAACT+TGG | + | chr7_3:39355404-39355423 | Msa1103480:CDS | 25.0% |
| ! | ATTTCTAATACAATCTTGGA+AGG | + | chr7_3:39355527-39355546 | Msa1103480:three_prime_UTR | 25.0% |
| ! | GAAGAAACCATTGATTGATA+CGG | - | chr7_3:39348856-39348875 | None:intergenic | 30.0% |
| ! | TTTTACTTTCCATTTCGAAG+AGG | - | chr7_3:39348932-39348951 | None:intergenic | 30.0% |
| ! | AAAATCGGAATTTGAGATGT+GGG | - | chr7_3:39349001-39349020 | None:intergenic | 30.0% |
| ! | TAAAATCGGAATTTGAGATG+TGG | - | chr7_3:39349002-39349021 | None:intergenic | 30.0% |
| CATTGAAATGGCGATAAAAT+CGG | - | chr7_3:39349016-39349035 | None:intergenic | 30.0% | |
| TAGAATCTGTAACAGAAAAC+GGG | - | chr7_3:39349164-39349183 | None:intergenic | 30.0% | |
| !!! | ACATATTTTTTGCAGGTTTC+GGG | + | chr7_3:39349489-39349508 | Msa1103480:intron | 30.0% |
| ! | ATTTTGAATGTGTAGAAGTG+GGG | - | chr7_3:39349530-39349549 | None:intergenic | 30.0% |
| ! | CATTTTGAATGTGTAGAAGT+GGG | - | chr7_3:39349531-39349550 | None:intergenic | 30.0% |
| ! | ACATTTTGAATGTGTAGAAG+TGG | - | chr7_3:39349532-39349551 | None:intergenic | 30.0% |
| GCATTATTCTTGGACTTTAA+TGG | + | chr7_3:39349990-39350009 | Msa1103480:intron | 30.0% | |
| AAACTAAAGTTTACCTGAGT+TGG | + | chr7_3:39350120-39350139 | Msa1103480:intron | 30.0% | |
| AACTAAAGTTTACCTGAGTT+GGG | + | chr7_3:39350121-39350140 | Msa1103480:intron | 30.0% | |
| CAACATTAAGACTTTGTTAG+TGG | - | chr7_3:39350214-39350233 | None:intergenic | 30.0% | |
| CACTAACAAAGTCTTAATGT+TGG | + | chr7_3:39350212-39350231 | Msa1103480:intron | 30.0% | |
| TCTGTAAGGTTTACTCAAAA+TGG | - | chr7_3:39350588-39350607 | None:intergenic | 30.0% | |
| TAAACCTTACAGAATGTTTC+AGG | + | chr7_3:39350595-39350614 | Msa1103480:intron | 30.0% | |
| AAACCTTACAGAATGTTTCA+GGG | + | chr7_3:39350596-39350615 | Msa1103480:intron | 30.0% | |
| GACTAATGTACATAAGTCTT+TGG | - | chr7_3:39350648-39350667 | None:intergenic | 30.0% | |
| TCACAAAAATTGTCACCAAA+TGG | - | chr7_3:39350960-39350979 | None:intergenic | 30.0% | |
| ! | GTGCTATTACTTAGTGAAAA+TGG | + | chr7_3:39351108-39351127 | Msa1103480:intron | 30.0% |
| ACATGTACCTAAAAATTGGT+CGG | + | chr7_3:39351164-39351183 | Msa1103480:intron | 30.0% | |
| AGTAGTGTTAAACTGTTAAC+GGG | - | chr7_3:39351270-39351289 | None:intergenic | 30.0% | |
| TGTGTTAAAAATCAATGACC+TGG | + | chr7_3:39351581-39351600 | Msa1103480:intron | 30.0% | |
| !!! | CAAAATTGTGTTTTTTGTGC+AGG | + | chr7_3:39351716-39351735 | Msa1103480:intron | 30.0% |
| TTCAATGCTTGCATATATGA+AGG | + | chr7_3:39351947-39351966 | Msa1103480:CDS | 30.0% | |
| ATTACCAGGAATTTGTATGT+AGG | + | chr7_3:39352040-39352059 | Msa1103480:intron | 30.0% | |
| GTTCTGTTACCAATAAAAAC+TGG | + | chr7_3:39352151-39352170 | Msa1103480:intron | 30.0% | |
| ! | TCAACAGTTCCAGTTTTTAT+TGG | - | chr7_3:39352163-39352182 | None:intergenic | 30.0% |
| ! | AATAAGTTGACAACAGCTTA+AGG | - | chr7_3:39352316-39352335 | None:intergenic | 30.0% |
| TCTAATGGAAGAAAGAATGA+GGG | - | chr7_3:39352399-39352418 | None:intergenic | 30.0% | |
| CACTGTTAATAAATCTCTTG+AGG | - | chr7_3:39352481-39352500 | None:intergenic | 30.0% | |
| ACTAGCACAAATATAAGCAT+AGG | - | chr7_3:39352524-39352543 | None:intergenic | 30.0% | |
| !!! | AAAGTTCTATTTTTGCTCAC+TGG | - | chr7_3:39352567-39352586 | None:intergenic | 30.0% |
| CTTAAGAAACTGATACATGA+TGG | - | chr7_3:39352828-39352847 | None:intergenic | 30.0% | |
| CTATGTGAAATGTGAATTGA+GGG | + | chr7_3:39352971-39352990 | Msa1103480:intron | 30.0% | |
| CACAAATTGAAATGGATCAT+AGG | - | chr7_3:39353026-39353045 | None:intergenic | 30.0% | |
| TCCATTTCAATTTGTGTAAC+AGG | + | chr7_3:39353030-39353049 | Msa1103480:intron | 30.0% | |
| ACCTGTTACACAAATTGAAA+TGG | - | chr7_3:39353034-39353053 | None:intergenic | 30.0% | |
| TCAGTTGCTAAAATTCGTTT+AGG | + | chr7_3:39353081-39353100 | Msa1103480:CDS | 30.0% | |
| CAGTTGCTAAAATTCGTTTA+GGG | + | chr7_3:39353082-39353101 | Msa1103480:CDS | 30.0% | |
| ! | CTGATACAGTTTTTATTGAG+AGG | + | chr7_3:39353157-39353176 | Msa1103480:CDS | 30.0% |
| GAGTGATAAAGAATAAAAGG+AGG | - | chr7_3:39353296-39353315 | None:intergenic | 30.0% | |
| ACGAACTTATCAACTCTATT+AGG | + | chr7_3:39353327-39353346 | Msa1103480:CDS | 30.0% | |
| ACCAGAGTACAAAAGAAATA+GGG | - | chr7_3:39353776-39353795 | None:intergenic | 30.0% | |
| AACCAGAGTACAAAAGAAAT+AGG | - | chr7_3:39353777-39353796 | None:intergenic | 30.0% | |
| ! | TTCCTCATTAGGTTTTACTT+CGG | + | chr7_3:39353955-39353974 | Msa1103480:intron | 30.0% |
| ATAAATGGAAGAGAGTAAAC+CGG | - | chr7_3:39354169-39354188 | None:intergenic | 30.0% | |
| ATCAAACCAGGGTTAATAAA+TGG | - | chr7_3:39354184-39354203 | None:intergenic | 30.0% | |
| ACAAATTCATCTACTTCTGA+TGG | - | chr7_3:39354257-39354276 | None:intergenic | 30.0% | |
| TAATTCACGTCAAGTACTTT+GGG | - | chr7_3:39354302-39354321 | None:intergenic | 30.0% | |
| ATAATTCACGTCAAGTACTT+TGG | - | chr7_3:39354303-39354322 | None:intergenic | 30.0% | |
| CAAACTTCTGAATTTAGCAT+TGG | - | chr7_3:39354459-39354478 | None:intergenic | 30.0% | |
| ! | ACAATTTTTGCAAGATGACT+TGG | - | chr7_3:39354499-39354518 | None:intergenic | 30.0% |
| AAGTCATCTTGCAAAAATTG+TGG | + | chr7_3:39354498-39354517 | Msa1103480:intron | 30.0% | |
| GTGCTAAATGTATGAATGTT+GGG | - | chr7_3:39354582-39354601 | None:intergenic | 30.0% | |
| TGTGCTAAATGTATGAATGT+TGG | - | chr7_3:39354583-39354602 | None:intergenic | 30.0% | |
| GTATTAACTGTGTATATGCA+CGG | + | chr7_3:39354640-39354659 | Msa1103480:intron | 30.0% | |
| TATTAACTGTGTATATGCAC+GGG | + | chr7_3:39354641-39354660 | Msa1103480:intron | 30.0% | |
| GCAGAGCTTCATAAATAAAT+AGG | - | chr7_3:39354839-39354858 | None:intergenic | 30.0% | |
| TCACTAATGTATTCCATTCA+TGG | + | chr7_3:39354929-39354948 | Msa1103480:CDS | 30.0% | |
| ACATGATGATTCTTGGATAT+TGG | - | chr7_3:39354959-39354978 | None:intergenic | 30.0% | |
| GCGAACATTTAGTATTCTTA+TGG | + | chr7_3:39355025-39355044 | Msa1103480:CDS | 30.0% | |
| ! | TTCTTATGGGGATTTAAGTT+TGG | + | chr7_3:39355039-39355058 | Msa1103480:CDS | 30.0% |
| ! | CTCTTCTAAAAAGATGTCAT+GGG | - | chr7_3:39355103-39355122 | None:intergenic | 30.0% |
| ! | ACTCTTCTAAAAAGATGTCA+TGG | - | chr7_3:39355104-39355123 | None:intergenic | 30.0% |
| ATGAATGGTGAACAAATTAG+GGG | + | chr7_3:39355204-39355223 | Msa1103480:CDS | 30.0% | |
| TTAAAGGAGTTAGTATCAGA+TGG | + | chr7_3:39355231-39355250 | Msa1103480:CDS | 30.0% | |
| ! | TGAGTCTTTAGAGAAAACTT+TGG | + | chr7_3:39355323-39355342 | Msa1103480:CDS | 30.0% |
| TCATTACACCATTGAATATC+TGG | - | chr7_3:39355390-39355409 | None:intergenic | 30.0% | |
| !! | ACTAACCTATTCTTTGAAGT+TGG | + | chr7_3:39355445-39355464 | Msa1103480:three_prime_UTR | 30.0% |
| AGAAACCAACTTCAAAGAAT+AGG | - | chr7_3:39355453-39355472 | None:intergenic | 30.0% | |
| ! | TGATGAGTTAGTTCTTATGT+TGG | + | chr7_3:39355595-39355614 | Msa1103480:three_prime_UTR | 30.0% |
| !!! | AACGTTTTTGGTGATGTAGT+AGG | - | chr7_3:39348891-39348910 | None:intergenic | 35.0% |
| TTGTAGTGATTCGTTGAAGT+TGG | - | chr7_3:39348968-39348987 | None:intergenic | 35.0% | |
| ! | CGATTTTATCGCCATTTCAA+TGG | + | chr7_3:39349014-39349033 | Msa1103480:CDS | 35.0% |
| ! | ACCAGTTTTCTCCATTGAAA+TGG | - | chr7_3:39349028-39349047 | None:intergenic | 35.0% |
| GTTGTAGTAAGAAGAACTCA+CGG | - | chr7_3:39349204-39349223 | None:intergenic | 35.0% | |
| !!! | CATATTTTTTGCAGGTTTCG+GGG | + | chr7_3:39349490-39349509 | Msa1103480:intron | 35.0% |
| TAAACCTTAAAGAACAGCTC+AGG | + | chr7_3:39349968-39349987 | Msa1103480:intron | 35.0% | |
| AAAGTCTTAATGTTGGCAGA+GGG | + | chr7_3:39350219-39350238 | Msa1103480:intron | 35.0% | |
| TATGATGTAGTTACAAGCGT+GGG | + | chr7_3:39350468-39350487 | Msa1103480:intron | 35.0% | |
| TCAAACAAAAAGCAGTATCG+TGG | - | chr7_3:39350919-39350938 | None:intergenic | 35.0% | |
| GTGATATTTGGACAACCATT+TGG | + | chr7_3:39350942-39350961 | Msa1103480:intron | 35.0% | |
| CAAACAAGTATGAAGCTTCA+TGG | + | chr7_3:39351136-39351155 | Msa1103480:intron | 35.0% | |
| ! | GACAATACCGACCAATTTTT+AGG | - | chr7_3:39351174-39351193 | None:intergenic | 35.0% |
| GTAGTGTTAAACTGTTAACG+GGG | - | chr7_3:39351269-39351288 | None:intergenic | 35.0% | |
| ! | ATGAATTTTCGGTCATGCAT+AGG | + | chr7_3:39351371-39351390 | Msa1103480:intron | 35.0% |
| ATTGGATGTCAGTGTAAAAC+CGG | + | chr7_3:39351432-39351451 | Msa1103480:intron | 35.0% | |
| !! | AAGCATTGAAATCAAAACCC+TGG | - | chr7_3:39351937-39351956 | None:intergenic | 35.0% |
| CAAACCTACATACAAATTCC+TGG | - | chr7_3:39352047-39352066 | None:intergenic | 35.0% | |
| CATCTAAATTACGCCTACAA+AGG | - | chr7_3:39352077-39352096 | None:intergenic | 35.0% | |
| CTTTGTAGGCGTAATTTAGA+TGG | + | chr7_3:39352075-39352094 | Msa1103480:intron | 35.0% | |
| ATACTTTCATTTGCCCAAAC+TGG | + | chr7_3:39352121-39352140 | Msa1103480:intron | 35.0% | |
| TACTTTCATTTGCCCAAACT+GGG | + | chr7_3:39352122-39352141 | Msa1103480:intron | 35.0% | |
| !! | TGGTTATTGTTTTACCTGCT+TGG | + | chr7_3:39352201-39352220 | Msa1103480:intron | 35.0% |
| !! | GGTTATTGTTTTACCTGCTT+GGG | + | chr7_3:39352202-39352221 | Msa1103480:intron | 35.0% |
| TTGACAACAGCTTAAGGTTA+AGG | - | chr7_3:39352310-39352329 | None:intergenic | 35.0% | |
| CTCTAATGGAAGAAAGAATG+AGG | - | chr7_3:39352400-39352419 | None:intergenic | 35.0% | |
| ! | GATACTTTGAAGAAAGGAGT+TGG | + | chr7_3:39352625-39352644 | Msa1103480:intron | 35.0% |
| TATAGGCAACTAAAGTAGCA+TGG | - | chr7_3:39352705-39352724 | None:intergenic | 35.0% | |
| !! | TTTACTGACTCACATCACAT+AGG | - | chr7_3:39352732-39352751 | None:intergenic | 35.0% |
| ! | GAAAGTTTTTCTGTCTCTTC+TGG | + | chr7_3:39352762-39352781 | Msa1103480:intron | 35.0% |
| GCTATGTGAAATGTGAATTG+AGG | + | chr7_3:39352970-39352989 | Msa1103480:intron | 35.0% | |
| AAATGTGAATTGAGGGTCTA+TGG | + | chr7_3:39352978-39352997 | Msa1103480:intron | 35.0% | |
| TGAAATGGATCATAGGTCTT+AGG | - | chr7_3:39353019-39353038 | None:intergenic | 35.0% | |
| AAAACTGTATCAGCAACAGT+AGG | - | chr7_3:39353150-39353169 | None:intergenic | 35.0% | |
| CAAACATCTACATTCAAGCA+CGG | - | chr7_3:39353389-39353408 | None:intergenic | 35.0% | |
| TTAAGCGGTTTATCCAAACA+GGG | - | chr7_3:39353499-39353518 | None:intergenic | 35.0% | |
| ATTAAGCGGTTTATCCAAAC+AGG | - | chr7_3:39353500-39353519 | None:intergenic | 35.0% | |
| !! | TCCCTATTTCTTTTGTACTC+TGG | + | chr7_3:39353772-39353791 | Msa1103480:intron | 35.0% |
| TCCTTTAGTGATACCTTCAA+AGG | + | chr7_3:39353839-39353858 | Msa1103480:CDS | 35.0% | |
| CCTTTAGTGATACCTTCAAA+GGG | + | chr7_3:39353840-39353859 | Msa1103480:CDS | 35.0% | |
| !!! | TGTCGTTTTGACGAAATCAA+GGG | + | chr7_3:39353884-39353903 | Msa1103480:CDS | 35.0% |
| ATCCGAAGTAAAACCTAATG+AGG | - | chr7_3:39353960-39353979 | None:intergenic | 35.0% | |
| AACACCATTAAGGCAATTGT+GGG | - | chr7_3:39354103-39354122 | None:intergenic | 35.0% | |
| AAACACCATTAAGGCAATTG+TGG | - | chr7_3:39354104-39354123 | None:intergenic | 35.0% | |
| !! | TTAGTTCTAGTTTACTGACC+CGG | + | chr7_3:39354147-39354166 | Msa1103480:intron | 35.0% |
| TAAATGGAAGAGAGTAAACC+GGG | - | chr7_3:39354168-39354187 | None:intergenic | 35.0% | |
| TCTCTTCCATTTATTAACCC+TGG | + | chr7_3:39354175-39354194 | Msa1103480:intron | 35.0% | |
| TTTGGGGAAAAATTTGCACA+AGG | - | chr7_3:39354285-39354304 | None:intergenic | 35.0% | |
| AATTCACGTCAAGTACTTTG+GGG | - | chr7_3:39354301-39354320 | None:intergenic | 35.0% | |
| !!! | GATGTTGGTCACTTTTTTCA+TGG | - | chr7_3:39354345-39354364 | None:intergenic | 35.0% |
| ! | TCACGTAGGATAAAGCATTA+CGG | - | chr7_3:39354367-39354386 | None:intergenic | 35.0% |
| AAGGAAATGAGTATTCACGT+AGG | - | chr7_3:39354381-39354400 | None:intergenic | 35.0% | |
| ! | ATTTAGCATTGGACATCAAG+AGG | - | chr7_3:39354448-39354467 | None:intergenic | 35.0% |
| !!! | TGCAGAATTTTGATTGCATG+CGG | + | chr7_3:39354548-39354567 | Msa1103480:intron | 35.0% |
| TCATACATTTAGCACATCAG+TGG | + | chr7_3:39354587-39354606 | Msa1103480:intron | 35.0% | |
| GCAGTTGAATCAAGATTAGA+CGG | + | chr7_3:39354609-39354628 | Msa1103480:intron | 35.0% | |
| GTAAACAAAGGCAAGATTGA+TGG | + | chr7_3:39354793-39354812 | Msa1103480:CDS | 35.0% | |
| !! | TTGATGGACTTGATGCTTTA+AGG | + | chr7_3:39354809-39354828 | Msa1103480:CDS | 35.0% |
| TTCCAGATTCAGTTACAACA+GGG | - | chr7_3:39354879-39354898 | None:intergenic | 35.0% | |
| TTTCCAGATTCAGTTACAAC+AGG | - | chr7_3:39354880-39354899 | None:intergenic | 35.0% | |
| TTGTAACTGAATCTGGAAAC+AGG | + | chr7_3:39354881-39354900 | Msa1103480:CDS | 35.0% | |
| CCTCATTACATGATGATTCT+TGG | - | chr7_3:39354966-39354985 | None:intergenic | 35.0% | |
| CCAAGAATCATCATGTAATG+AGG | + | chr7_3:39354963-39354982 | Msa1103480:CDS | 35.0% | |
| ! | GGGATTTAAGTTTGGTATGA+CGG | + | chr7_3:39355047-39355066 | Msa1103480:CDS | 35.0% |
| AAAAGATGTCATGGGATTCA+CGG | - | chr7_3:39355095-39355114 | None:intergenic | 35.0% | |
| !!! | TTGTGCCTTTGTTGTTTTCT+GGG | + | chr7_3:39355149-39355168 | Msa1103480:CDS | 35.0% |
| TTTGTTCATTGCAAAGAACC+AGG | + | chr7_3:39355477-39355496 | Msa1103480:three_prime_UTR | 35.0% | |
| TGATGACATCAAAAATTGCC+TGG | - | chr7_3:39355498-39355517 | None:intergenic | 35.0% | |
| CTAATACAATCTTGGAAGGT+AGG | + | chr7_3:39355531-39355550 | Msa1103480:three_prime_UTR | 35.0% | |
| ! | CCATTTCGAAGAGGAGATTT+TGG | - | chr7_3:39348923-39348942 | None:intergenic | 40.0% |
| CCAAAATCTCCTCTTCGAAA+TGG | + | chr7_3:39348920-39348939 | Msa1103480:CDS | 40.0% | |
| GCCATTTCAATGGAGAAAAC+TGG | + | chr7_3:39349024-39349043 | Msa1103480:CDS | 40.0% | |
| !! | CTGACTAGCTTTCAGATAAG+CGG | - | chr7_3:39349103-39349122 | None:intergenic | 40.0% |
| ! | AGTTTAGATGAGTTGGGTCT+CGG | + | chr7_3:39349324-39349343 | Msa1103480:intron | 40.0% |
| TACCAACTGAGTTAAGCTCA+CGG | - | chr7_3:39349461-39349480 | None:intergenic | 40.0% | |
| ! | AACAAAGATGAGTTGGGTCT+CGG | + | chr7_3:39349622-39349641 | Msa1103480:intron | 40.0% |
| ! | TCAAATGAGGTTAGTCCAGT+TGG | - | chr7_3:39349715-39349734 | None:intergenic | 40.0% |
| CTAGCATTTCCAGTCAAATG+AGG | - | chr7_3:39349728-39349747 | None:intergenic | 40.0% | |
| ATAAAGCAGAGATACACGCA+CGG | + | chr7_3:39349921-39349940 | Msa1103480:intron | 40.0% | |
| AATGCCTGAGCTGTTCTTTA+AGG | - | chr7_3:39349975-39349994 | None:intergenic | 40.0% | |
| AACAGCTCAGGCATTATTCT+TGG | + | chr7_3:39349980-39349999 | Msa1103480:intron | 40.0% | |
| CAAAGTCTTAATGTTGGCAG+AGG | + | chr7_3:39350218-39350237 | Msa1103480:intron | 40.0% | |
| AGTTGAACTCATGCTCTTGT+GGG | + | chr7_3:39350242-39350261 | Msa1103480:intron | 40.0% | |
| CTATGATGTAGTTACAAGCG+TGG | + | chr7_3:39350467-39350486 | Msa1103480:intron | 40.0% | |
| GTGTCAACATGTTAGTGTCA+AGG | - | chr7_3:39350774-39350793 | None:intergenic | 40.0% | |
| ATTCTCAATTCTTGAGCCAC+TGG | - | chr7_3:39350796-39350815 | None:intergenic | 40.0% | |
| ATGCGAGTATGACTGTGTAA+AGG | + | chr7_3:39351054-39351073 | Msa1103480:intron | 40.0% | |
| ! | ACTGTGTAAAGGTTAGCCAT+AGG | + | chr7_3:39351065-39351084 | Msa1103480:intron | 40.0% |
| ! | AATTTTCGGTCATGCATAGG+TGG | + | chr7_3:39351374-39351393 | Msa1103480:intron | 40.0% |
| ! | ATTTTCGGTCATGCATAGGT+GGG | + | chr7_3:39351375-39351394 | Msa1103480:intron | 40.0% |
| TTGGATGTCAGTGTAAAACC+GGG | + | chr7_3:39351433-39351452 | Msa1103480:intron | 40.0% | |
| GTAAAACCGGGTTACTATGA+CGG | + | chr7_3:39351445-39351464 | Msa1103480:intron | 40.0% | |
| TATGAACCGTCATAGTAACC+CGG | - | chr7_3:39351454-39351473 | None:intergenic | 40.0% | |
| TCCATAGCTAGCAGATACAT+TGG | + | chr7_3:39351557-39351576 | Msa1103480:intron | 40.0% | |
| CCATAGCTAGCAGATACATT+GGG | + | chr7_3:39351558-39351577 | Msa1103480:intron | 40.0% | |
| ACTCATCCCTTGGAAACAAA+AGG | - | chr7_3:39351750-39351769 | None:intergenic | 40.0% | |
| !! | GGTTTGTTGTTTGCCTTTGT+AGG | + | chr7_3:39352061-39352080 | Msa1103480:intron | 40.0% |
| AGAAAGGAGTTGGATTTGTG+TGG | + | chr7_3:39352635-39352654 | Msa1103480:intron | 40.0% | |
| GAAAGGAGTTGGATTTGTGT+GGG | + | chr7_3:39352636-39352655 | Msa1103480:intron | 40.0% | |
| CACATCACATAGGCAACTAT+AGG | - | chr7_3:39352722-39352741 | None:intergenic | 40.0% | |
| GTCTCTTCTGGTATGTGTTA+AGG | + | chr7_3:39352774-39352793 | Msa1103480:intron | 40.0% | |
| TCTGGTATGTGTTAAGGCAA+AGG | + | chr7_3:39352780-39352799 | Msa1103480:intron | 40.0% | |
| GTCGAAGAGATTATCTGTTC+AGG | - | chr7_3:39352898-39352917 | None:intergenic | 40.0% | |
| GATTTCATCACACCAAGAGA+TGG | - | chr7_3:39353117-39353136 | None:intergenic | 40.0% | |
| GCAGAATTAGTTGTACTTGG+CGG | - | chr7_3:39353418-39353437 | None:intergenic | 40.0% | |
| CCTGCAGAATTAGTTGTACT+TGG | - | chr7_3:39353421-39353440 | None:intergenic | 40.0% | |
| CCAAGTACAACTAATTCTGC+AGG | + | chr7_3:39353418-39353437 | Msa1103480:CDS | 40.0% | |
| ACCTATTGTGCCAAGATCAA+GGG | - | chr7_3:39353733-39353752 | None:intergenic | 40.0% | |
| TACCTATTGTGCCAAGATCA+AGG | - | chr7_3:39353734-39353753 | None:intergenic | 40.0% | |
| !! | CCCTTTGAAGGTATCACTAA+AGG | - | chr7_3:39353843-39353862 | None:intergenic | 40.0% |
| TTAGTGATACCTTCAAAGGG+TGG | + | chr7_3:39353843-39353862 | Msa1103480:CDS | 40.0% | |
| TAGTGATACCTTCAAAGGGT+GGG | + | chr7_3:39353844-39353863 | Msa1103480:CDS | 40.0% | |
| !!! | GTGTCGTTTTGACGAAATCA+AGG | + | chr7_3:39353883-39353902 | Msa1103480:CDS | 40.0% |
| GACGAAATCAAGGGAAGATA+AGG | + | chr7_3:39353893-39353912 | Msa1103480:CDS | 40.0% | |
| ! | AAGGGAAGATAAGGAAGTGT+TGG | + | chr7_3:39353902-39353921 | Msa1103480:CDS | 40.0% |
| CTGTTTGTGTCTTCCTCATT+AGG | + | chr7_3:39353944-39353963 | Msa1103480:intron | 40.0% | |
| GAAAATTCGTGGATTTCGAG+AGG | + | chr7_3:39354038-39354057 | Msa1103480:CDS | 40.0% | |
| ! | GATAACAGGTTTCTCTGAAG+CGG | - | chr7_3:39354079-39354098 | None:intergenic | 40.0% |
| ATCTCCCACAATTGCCTTAA+TGG | + | chr7_3:39354096-39354115 | Msa1103480:CDS | 40.0% | |
| ! | GGATAAAGCATTACGGATGT+TGG | - | chr7_3:39354360-39354379 | None:intergenic | 40.0% |
| TCAGGAATTTCCATGTCAAC+TGG | - | chr7_3:39354407-39354426 | None:intergenic | 40.0% | |
| TCCAGATTCAGTTACAACAG+GGG | - | chr7_3:39354878-39354897 | None:intergenic | 40.0% | |
| TTAGTGAAGTCTTCAAGCTG+CGG | - | chr7_3:39354916-39354935 | None:intergenic | 40.0% | |
| GTAATGAGGATGTTAGTGTG+TGG | + | chr7_3:39354977-39354996 | Msa1103480:CDS | 40.0% | |
| ! | TTTAAGTTTGGTATGACGGC+CGG | + | chr7_3:39355051-39355070 | Msa1103480:CDS | 40.0% |
| !!! | GTTGTGCCTTTGTTGTTTTC+TGG | + | chr7_3:39355148-39355167 | Msa1103480:CDS | 40.0% |
| AGGTTCCCAGAAAACAACAA+AGG | - | chr7_3:39355157-39355176 | None:intergenic | 40.0% | |
| !!! | TTTGTTGTTTTCTGGGAACC+TGG | + | chr7_3:39355156-39355175 | Msa1103480:CDS | 40.0% |
| AGAAAATCTTTCGACAAGCC+AGG | - | chr7_3:39355177-39355196 | None:intergenic | 40.0% | |
| AATGGTGAACAAATTAGGGG+AGG | + | chr7_3:39355207-39355226 | Msa1103480:CDS | 40.0% | |
| ACAAATTAGGGGAGGCTTAA+AGG | + | chr7_3:39355215-39355234 | Msa1103480:CDS | 40.0% | |
| AGTTAGTATCAGATGGCTTG+AGG | + | chr7_3:39355238-39355257 | Msa1103480:CDS | 40.0% | |
| GTTAGTATCAGATGGCTTGA+GGG | + | chr7_3:39355239-39355258 | Msa1103480:CDS | 40.0% | |
| AGACCTATAGAACAATGTGC+AGG | + | chr7_3:39355274-39355293 | Msa1103480:CDS | 40.0% | |
| TAGCCTGCACATTGTTCTAT+AGG | - | chr7_3:39355280-39355299 | None:intergenic | 40.0% | |
| TATAGAACAATGTGCAGGCT+AGG | + | chr7_3:39355279-39355298 | Msa1103480:CDS | 40.0% | |
| AACGACGCCGTATCAATCAA+TGG | + | chr7_3:39348846-39348865 | Msa1103480:exon | 45.0% | |
| ! | TGGTGCAGAGTGAACGTTTT+TGG | - | chr7_3:39348903-39348922 | None:intergenic | 45.0% |
| GTTCTTCTTCAACAACTCCG+TGG | + | chr7_3:39349046-39349065 | Msa1103480:CDS | 45.0% | |
| ! | GTTTAGATGAGTTGGGTCTC+GGG | + | chr7_3:39349325-39349344 | Msa1103480:intron | 45.0% |
| !! | GCTCAACTGGTTCGAGATAT+GGG | + | chr7_3:39349357-39349376 | Msa1103480:intron | 45.0% |
| ! | CTGGTTCGAGATATGGGATA+AGG | + | chr7_3:39349363-39349382 | Msa1103480:intron | 45.0% |
| CGAGATATGGGATAAGGAGT+TGG | + | chr7_3:39349369-39349388 | Msa1103480:intron | 45.0% | |
| GATATGGGATAAGGAGTTGG+AGG | + | chr7_3:39349372-39349391 | Msa1103480:intron | 45.0% | |
| ! | TTTTATAGTTCGTTCGGCCC+AGG | - | chr7_3:39349399-39349418 | None:intergenic | 45.0% |
| ACCAACTGAGTTAAGCTCAC+GGG | - | chr7_3:39349460-39349479 | None:intergenic | 45.0% | |
| ! | ACAAAGATGAGTTGGGTCTC+GGG | + | chr7_3:39349623-39349642 | Msa1103480:intron | 45.0% |
| GAGTTGAACTCATGCCTTGT+GGG | + | chr7_3:39349671-39349690 | Msa1103480:intron | 45.0% | |
| ! | CAGTCGGTTTATATCCCACA+AGG | - | chr7_3:39349688-39349707 | None:intergenic | 45.0% |
| TAAACCGACTGCTTTCCAAC+TGG | + | chr7_3:39349697-39349716 | Msa1103480:intron | 45.0% | |
| TAGTCCAGTTGGAAAGCAGT+CGG | - | chr7_3:39349704-39349723 | None:intergenic | 45.0% | |
| CTGGACTAACCTCATTTGAC+TGG | + | chr7_3:39349716-39349735 | Msa1103480:intron | 45.0% | |
| ! | AGTTTACCTGAGTTGGGTCT+CGG | + | chr7_3:39350127-39350146 | Msa1103480:intron | 45.0% |
| GAGTTGAACTCATGCTCTTG+TGG | + | chr7_3:39350241-39350260 | Msa1103480:intron | 45.0% | |
| GTTGAACTCATGCTCTTGTG+GGG | + | chr7_3:39350243-39350262 | Msa1103480:intron | 45.0% | |
| TGTCACAAGAGGTTAGCAGT+TGG | - | chr7_3:39350275-39350294 | None:intergenic | 45.0% | |
| AACTGCTAACCTCTTGTGAC+AGG | + | chr7_3:39350274-39350293 | Msa1103480:intron | 45.0% | |
| CCATCATTTCCTGTCACAAG+AGG | - | chr7_3:39350286-39350305 | None:intergenic | 45.0% | |
| CCTCTTGTGACAGGAAATGA+TGG | + | chr7_3:39350283-39350302 | Msa1103480:intron | 45.0% | |
| CTGCCCTGAAACATTCTGTA+AGG | - | chr7_3:39350602-39350621 | None:intergenic | 45.0% | |
| CTTACAGAATGTTTCAGGGC+AGG | + | chr7_3:39350600-39350619 | Msa1103480:intron | 45.0% | |
| TTCAGGGCAGGCATTATTCT+TGG | + | chr7_3:39350612-39350631 | Msa1103480:intron | 45.0% | |
| CACTAACATGTTGACACCAG+TGG | + | chr7_3:39350777-39350796 | Msa1103480:intron | 45.0% | |
| TTGTCGCGTAAGAGCAGAAA+TGG | + | chr7_3:39351189-39351208 | Msa1103480:intron | 45.0% | |
| CTAACACAGTCACACACTCA+TGG | - | chr7_3:39351323-39351342 | None:intergenic | 45.0% | |
| CCCAATGTATCTGCTAGCTA+TGG | - | chr7_3:39351561-39351580 | None:intergenic | 45.0% | |
| ! | CCAAGCTTTAACTCATCCCT+TGG | - | chr7_3:39351760-39351779 | None:intergenic | 45.0% |
| CCAAGGGATGAGTTAAAGCT+TGG | + | chr7_3:39351757-39351776 | Msa1103480:CDS | 45.0% | |
| GACGTCTCATTTAGCAACCA+TGG | + | chr7_3:39351907-39351926 | Msa1103480:CDS | 45.0% | |
| ! | CTTGCATATATGAAGGTGCG+AGG | + | chr7_3:39351954-39351973 | Msa1103480:intron | 45.0% |
| CAGAACAACAGTCCCAGTTT+GGG | - | chr7_3:39352137-39352156 | None:intergenic | 45.0% | |
| ACAGAACAACAGTCCCAGTT+TGG | - | chr7_3:39352138-39352157 | None:intergenic | 45.0% | |
| ACTCTTCTTAGTACCCAAGC+AGG | - | chr7_3:39352218-39352237 | None:intergenic | 45.0% | |
| ACTGTATCAGCAACAGTAGG+AGG | - | chr7_3:39353147-39353166 | None:intergenic | 45.0% | |
| GGCACAAAGACAAGCAAAGA+TGG | + | chr7_3:39353225-39353244 | Msa1103480:CDS | 45.0% | |
| ATACAACTTTGGGCCCTGTT+TGG | + | chr7_3:39353483-39353502 | Msa1103480:intron | 45.0% | |
| TCCAAACAAGCCCTTGATCT+TGG | + | chr7_3:39353720-39353739 | Msa1103480:intron | 45.0% | |
| CTGGTTTCTCTGCATGTAGA+TGG | + | chr7_3:39353791-39353810 | Msa1103480:intron | 45.0% | |
| !! | GGAAGATAAGGAAGTGTTGG+AGG | + | chr7_3:39353905-39353924 | Msa1103480:CDS | 45.0% |
| AGAGCTTCGTAGTTTGGAAG+AGG | + | chr7_3:39354005-39354024 | Msa1103480:CDS | 45.0% | |
| GAGGAGAGCAAGAAAATTCG+TGG | + | chr7_3:39354027-39354046 | Msa1103480:CDS | 45.0% | |
| AGGCAATTGTGGGAGATAAC+AGG | - | chr7_3:39354093-39354112 | None:intergenic | 45.0% | |
| TCATCTACTTCTGATGGCAG+TGG | - | chr7_3:39354251-39354270 | None:intergenic | 45.0% | |
| TTTCCTTGCACCAGTTGACA+TGG | + | chr7_3:39354394-39354413 | Msa1103480:CDS | 45.0% | |
| TTTCCATGTCAACTGGTGCA+AGG | - | chr7_3:39354400-39354419 | None:intergenic | 45.0% | |
| GACATGGAAATTCCTGACCA+AGG | + | chr7_3:39354410-39354429 | Msa1103480:CDS | 45.0% | |
| TATATGCACGGGATTGTGAC+TGG | + | chr7_3:39354652-39354671 | Msa1103480:intron | 45.0% | |
| TCCCCTGTTGTAACTGAATC+TGG | + | chr7_3:39354874-39354893 | Msa1103480:CDS | 45.0% | |
| TAGTGAAGTCTTCAAGCTGC+GGG | - | chr7_3:39354915-39354934 | None:intergenic | 45.0% | |
| ! | GGATATTGGCTGACCATGAA+TGG | - | chr7_3:39354945-39354964 | None:intergenic | 45.0% |
| GAGAACACTCTTCAACATGC+CGG | - | chr7_3:39355073-39355092 | None:intergenic | 45.0% | |
| AATGTGCAGGCTAGGTTTGT+GGG | + | chr7_3:39355287-39355306 | Msa1103480:CDS | 45.0% | |
| GTCGTTACCGTTTCGTTCCT+GGG | - | chr7_3:39348832-39348851 | None:intergenic | 50.0% | |
| CCGTATCGAAAGGCTGAACA+CGG | - | chr7_3:39349074-39349093 | None:intergenic | 50.0% | |
| CCGTGTTCAGCCTTTCGATA+CGG | + | chr7_3:39349071-39349090 | Msa1103480:CDS | 50.0% | |
| TGTTCAGCCTTTCGATACGG+CGG | + | chr7_3:39349074-39349093 | Msa1103480:CDS | 50.0% | |
| AAGAAGCTGAAACCGCTGAG+CGG | - | chr7_3:39349127-39349146 | None:intergenic | 50.0% | |
| !! | GGCTCAACTGGTTCGAGATA+TGG | + | chr7_3:39349356-39349375 | Msa1103480:intron | 50.0% |
| GATAAGGAGTTGGAGGTCCT+GGG | + | chr7_3:39349379-39349398 | Msa1103480:intron | 50.0% | |
| CCAACTGAGTTAAGCTCACG+GGG | - | chr7_3:39349459-39349478 | None:intergenic | 50.0% | |
| ! | CAAAGATGAGTTGGGTCTCG+GGG | + | chr7_3:39349624-39349643 | Msa1103480:intron | 50.0% |
| GGAGTTGAACTCATGCCTTG+TGG | + | chr7_3:39349670-39349689 | Msa1103480:intron | 50.0% | |
| ACGCTCACTAGTGTCACAAC+AGG | + | chr7_3:39350150-39350169 | Msa1103480:intron | 50.0% | |
| CACAACAGGTTTCAGAGCAC+AGG | + | chr7_3:39350164-39350183 | Msa1103480:intron | 50.0% | |
| CACACCAAGAGATGGAGAAC+TGG | - | chr7_3:39353109-39353128 | None:intergenic | 50.0% | |
| ! | GCCAAGATCAAGGGCTTGTT+TGG | - | chr7_3:39353724-39353743 | None:intergenic | 50.0% |
| GCCCTTGATCTTGGCACAAT+AGG | + | chr7_3:39353729-39353748 | Msa1103480:intron | 50.0% | |
| TGAGTTGTCCCACCCTTTGA+AGG | - | chr7_3:39353855-39353874 | None:intergenic | 50.0% | |
| TTCAAAGGGTGGGACAACTC+AGG | + | chr7_3:39353854-39353873 | Msa1103480:CDS | 50.0% | |
| GCAGAGAGAGCTTCGTAGTT+TGG | + | chr7_3:39353999-39354018 | Msa1103480:intron | 50.0% | |
| GCTTCGTAGTTTGGAAGAGG+AGG | + | chr7_3:39354008-39354027 | Msa1103480:CDS | 50.0% | |
| TAGAGTGACTGACCTTGGTC+AGG | - | chr7_3:39354425-39354444 | None:intergenic | 50.0% | |
| AGAGGTAGAGTGACTGACCT+TGG | - | chr7_3:39354430-39354449 | None:intergenic | 50.0% | |
| AGTGAAGTCTTCAAGCTGCG+GGG | - | chr7_3:39354914-39354933 | None:intergenic | 50.0% | |
| TCAGATGGCTTGAGGGTAAC+AGG | + | chr7_3:39355246-39355265 | Msa1103480:CDS | 50.0% | |
| CAATGTGCAGGCTAGGTTTG+TGG | + | chr7_3:39355286-39355305 | Msa1103480:CDS | 50.0% | |
| CGTCGTTACCGTTTCGTTCC+TGG | - | chr7_3:39348833-39348852 | None:intergenic | 55.0% | |
| ! | AAAGGCTGAACACGGTGCCA+CGG | - | chr7_3:39349066-39349085 | None:intergenic | 55.0% |
| AAGCTAGTCAGTCCGCTCAG+CGG | + | chr7_3:39349112-39349131 | Msa1103480:CDS | 55.0% | |
| GAACTCACGGATGAGCAACG+AGG | - | chr7_3:39349191-39349210 | None:intergenic | 55.0% | |
| GGATAAGGAGTTGGAGGTCC+TGG | + | chr7_3:39349378-39349397 | Msa1103480:intron | 55.0% | |
| CCCCGTGAGCTTAACTCAGT+TGG | + | chr7_3:39349456-39349475 | Msa1103480:intron | 55.0% | |
| ! | TGTGTAGAAGTGGGGTGTCC+TGG | - | chr7_3:39349522-39349541 | None:intergenic | 55.0% |
| CACCAACTAAAGCTGGCAGC+TGG | + | chr7_3:39349649-39349668 | Msa1103480:intron | 55.0% | |
| ! | CTCCAGCTGCCAGCTTTAGT+TGG | - | chr7_3:39349654-39349673 | None:intergenic | 55.0% |
| ACAGGTTTCAGAGCACAGGC+AGG | + | chr7_3:39350168-39350187 | Msa1103480:intron | 55.0% | |
| CAGGTTTCAGAGCACAGGCA+GGG | + | chr7_3:39350169-39350188 | Msa1103480:intron | 55.0% | |
| AGGTTTCAGAGCACAGGCAG+GGG | + | chr7_3:39350170-39350189 | Msa1103480:intron | 55.0% | |
| TTTAGCAACCATGGCTCGCC+AGG | + | chr7_3:39351916-39351935 | Msa1103480:CDS | 55.0% | |
| TTAGCAACCATGGCTCGCCA+GGG | + | chr7_3:39351917-39351936 | Msa1103480:CDS | 55.0% | |
| ATCAAAACCCTGGCGAGCCA+TGG | - | chr7_3:39351927-39351946 | None:intergenic | 55.0% | |
| GGGACCAGTTCTCCATCTCT+TGG | + | chr7_3:39353102-39353121 | Msa1103480:CDS | 55.0% | |
| GCGGTTTCCGCCGTATCGAA+AGG | - | chr7_3:39349084-39349103 | None:intergenic | 60.0% | |
| !! | GTTGGGTCTCGGGCGTTGAA+TGG | + | chr7_3:39349335-39349354 | Msa1103480:intron | 60.0% |
| !! | CGGGCGTTGAATGGCTCAAC+TGG | + | chr7_3:39349344-39349363 | Msa1103480:intron | 60.0% |
| CAGGTTTCGGGGTTCGAACC+AGG | + | chr7_3:39349501-39349520 | Msa1103480:intron | 60.0% | |
| CGGGGCTCACCAACTAAAGC+TGG | + | chr7_3:39349642-39349661 | Msa1103480:intron | 60.0% | |
| GAGCGTCCGAGACCCAACTC+AGG | - | chr7_3:39350136-39350155 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 39348823 | 39355632 | 39348823 | ID=Msa1103480;Name=Msa1103480 |
| chr7_3 | mRNA | 39348823 | 39355632 | 39348823 | ID=Msa1103480-mRNA-1;Parent=Msa1103480;Name=Msa1103480-mRNA-1;_AED=0.02;_eAED=0.02;_QI=42|1|1|1|0.87|0.77|9|195|624 |
| chr7_3 | exon | 39348823 | 39349202 | 39348823 | ID=Msa1103480-mRNA-1:exon:7971;Parent=Msa1103480-mRNA-1 |
| chr7_3 | exon | 39351738 | 39351784 | 39351738 | ID=Msa1103480-mRNA-1:exon:7972;Parent=Msa1103480-mRNA-1 |
| chr7_3 | exon | 39351885 | 39351968 | 39351885 | ID=Msa1103480-mRNA-1:exon:7973;Parent=Msa1103480-mRNA-1 |
| chr7_3 | exon | 39353052 | 39353246 | 39353052 | ID=Msa1103480-mRNA-1:exon:7974;Parent=Msa1103480-mRNA-1 |
| chr7_3 | exon | 39353327 | 39353439 | 39353327 | ID=Msa1103480-mRNA-1:exon:7975;Parent=Msa1103480-mRNA-1 |
| chr7_3 | exon | 39353810 | 39353926 | 39353810 | ID=Msa1103480-mRNA-1:exon:7976;Parent=Msa1103480-mRNA-1 |
| chr7_3 | exon | 39354003 | 39354117 | 39354003 | ID=Msa1103480-mRNA-1:exon:7977;Parent=Msa1103480-mRNA-1 |
| chr7_3 | exon | 39354216 | 39354431 | 39354216 | ID=Msa1103480-mRNA-1:exon:7978;Parent=Msa1103480-mRNA-1 |
| chr7_3 | exon | 39354788 | 39355632 | 39354788 | ID=Msa1103480-mRNA-1:exon:7979;Parent=Msa1103480-mRNA-1 |
| chr7_3 | five_prime_UTR | 39348823 | 39348864 | 39348823 | ID=Msa1103480-mRNA-1:five_prime_utr;Parent=Msa1103480-mRNA-1 |
| chr7_3 | CDS | 39348865 | 39349202 | 39348865 | ID=Msa1103480-mRNA-1:cds;Parent=Msa1103480-mRNA-1 |
| chr7_3 | CDS | 39351738 | 39351784 | 39351738 | ID=Msa1103480-mRNA-1:cds;Parent=Msa1103480-mRNA-1 |
| chr7_3 | CDS | 39351885 | 39351968 | 39351885 | ID=Msa1103480-mRNA-1:cds;Parent=Msa1103480-mRNA-1 |
| chr7_3 | CDS | 39353052 | 39353246 | 39353052 | ID=Msa1103480-mRNA-1:cds;Parent=Msa1103480-mRNA-1 |
| chr7_3 | CDS | 39353327 | 39353439 | 39353327 | ID=Msa1103480-mRNA-1:cds;Parent=Msa1103480-mRNA-1 |
| chr7_3 | CDS | 39353810 | 39353926 | 39353810 | ID=Msa1103480-mRNA-1:cds;Parent=Msa1103480-mRNA-1 |
| chr7_3 | CDS | 39354003 | 39354117 | 39354003 | ID=Msa1103480-mRNA-1:cds;Parent=Msa1103480-mRNA-1 |
| chr7_3 | CDS | 39354216 | 39354431 | 39354216 | ID=Msa1103480-mRNA-1:cds;Parent=Msa1103480-mRNA-1 |
| chr7_3 | CDS | 39354788 | 39355437 | 39354788 | ID=Msa1103480-mRNA-1:cds;Parent=Msa1103480-mRNA-1 |
| chr7_3 | three_prime_UTR | 39355438 | 39355632 | 39355438 | ID=Msa1103480-mRNA-1:three_prime_utr;Parent=Msa1103480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
