AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0358170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0358170 MtrunA17_Chr3g0116321 98.952 668 7 0 1 668 1 668 0.0 1355
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0358170 AT3G48500.1 71.452 613 162 4 1 606 1 607 0.0 902
Msa0358170 AT3G48500.2 68.224 642 162 5 1 606 1 636 0.0 886

Find 196 sgRNAs with CRISPR-Local

Find 871 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAGAGGGTTTAAGGTTTA+AGG 0.114801 3_1:-42908926 None:intergenic
CTTCCTTCCATAGTTTCTTA+TGG 0.175288 3_1:-42919210 None:intergenic
TCGGATCAAATTCATGTTAA+TGG 0.194739 3_1:+42919792 Msa0358170:CDS
GGAATAAGGGAGAGGGTTTA+AGG 0.214064 3_1:-42908933 None:intergenic
GGTACTAATGCATTCTTATA+AGG 0.230750 3_1:-42915620 None:intergenic
TGGTGGATGACGGTGGAATA+AGG 0.231461 3_1:-42908947 None:intergenic
GGAAGCTAATAAGGATTTAT+TGG 0.236286 3_1:+42909569 Msa0358170:CDS
GGCGAAGCAGTTTGAGATTA+AGG 0.241674 3_1:+42909299 Msa0358170:CDS
AACCAATCATTGTTCTTTAT+AGG 0.253075 3_1:-42911292 None:intergenic
TAAAGAACAATGATTGGTTT+TGG 0.254290 3_1:+42911296 Msa0358170:CDS
TACATCAGATGATCTATATT+TGG 0.254545 3_1:-42912969 None:intergenic
TGCCCACAATTGATTTGTTA+TGG 0.269036 3_1:-42919602 None:intergenic
TCTGTATCGTTATGACTATT+GGG 0.269963 3_1:+42919530 Msa0358170:CDS
GGTTTAAGGTTTAAGGGTTT+AGG 0.271336 3_1:-42908919 None:intergenic
GAAGAAGAAGATTGAGGAAA+TGG 0.271584 3_1:+42909254 Msa0358170:CDS
TGCTTCGTCTTCAGATTCTT+TGG 0.272263 3_1:-42909073 None:intergenic
ATTGGAAGAGGAATCTTATA+AGG 0.274488 3_1:+42909587 Msa0358170:CDS
CTCTGTATCGTTATGACTAT+TGG 0.283903 3_1:+42919529 Msa0358170:CDS
TAACGATACAGAGGACTTTC+AGG 0.290361 3_1:-42919519 None:intergenic
AGTGACGGAAGAGGAGTATT+TGG 0.296475 3_1:+42909278 Msa0358170:CDS
TCTTCCTCTGGCTTGTCTCC+TGG 0.300554 3_1:-42913447 None:intergenic
GAAAGTGAAGAGATAAGAAT+TGG 0.303313 3_1:-42908896 None:intergenic
CGGAGGAGTTGAAGACTAAA+TGG 0.307855 3_1:+42909331 Msa0358170:CDS
GTTTAAGGTTTAAGGGTTTA+GGG 0.321489 3_1:-42908918 None:intergenic
GTCCGCGCGAATTCGGCTTC+AGG 0.329940 3_1:-42909150 None:intergenic
GGAGAGGGTTTAAGGTTTAA+GGG 0.330041 3_1:-42908925 None:intergenic
TGAGTGGGTGGAAGCTAATA+AGG 0.337017 3_1:+42909560 Msa0358170:CDS
GCCCACAATTGATTTGTTAT+GGG 0.339910 3_1:-42919601 None:intergenic
ATTAATCCTGATAAATATAA+AGG 0.347698 3_1:+42915527 Msa0358170:CDS
GACCGTCATTGTTGAAATTA+CGG 0.356334 3_1:+42911345 Msa0358170:CDS
GGAGGCGAAGAGAGTGAGGT+TGG 0.363629 3_1:+42909458 Msa0358170:CDS
TCTTCGTCACGGTGAAATAT+TGG 0.368899 3_1:-42913133 None:intergenic
TGAGATTAAGGAAGATGTTC+CGG 0.369550 3_1:+42909311 Msa0358170:CDS
AGCGAGATCCTTATCGCTTC+CGG 0.369751 3_1:+42912919 Msa0358170:CDS
TTGGCCTCCAAGAGGGTGGG+AGG 0.370988 3_1:+42909392 Msa0358170:CDS
CGGATCAAATTCATGTTAAT+GGG 0.375652 3_1:+42919793 Msa0358170:CDS
TTCCTATAAAGAACAATGAT+TGG 0.376316 3_1:+42911290 Msa0358170:CDS
TGTTAAAGAGCTGGACTTAG+AGG 0.378218 3_1:+42918745 Msa0358170:CDS
ACGAAGCACGTCGCCGCAAC+TGG 0.379056 3_1:+42909088 Msa0358170:CDS
GAATGTTGAACCCTAGGTAT+AGG 0.380725 3_1:+42909232 Msa0358170:CDS
TGGAGGAAGGTTTCGTCGAC+GGG 0.384013 3_1:-42909033 None:intergenic
TACTAATCCAGATGAATTGC+GGG 0.389911 3_1:+42913156 Msa0358170:CDS
GAGACTCGTCCGCGCGAATT+CGG 0.391123 3_1:-42909157 None:intergenic
GGTGGATGACGGTGGAATAA+GGG 0.391608 3_1:-42908946 None:intergenic
GTGCAAACCCGCAATTCATC+TGG 0.394940 3_1:-42913163 None:intergenic
AAAGTGAAGAGATAAGAATT+GGG 0.395883 3_1:-42908895 None:intergenic
CGATCCACCTCCCACCCTCT+TGG 0.399413 3_1:-42909399 None:intergenic
TCCTCCCAGGGTGATAATCT+TGG 0.407958 3_1:-42909721 None:intergenic
AGTTGGTTCCGCCGAGGGAT+TGG 0.408224 3_1:+42909373 Msa0358170:CDS
AACGAAGTTCGATCGGGAAC+CGG 0.411671 3_1:-42912938 None:intergenic
TACAGCTCCATAAGAAACTA+TGG 0.413741 3_1:+42919203 Msa0358170:intron
TGAGTAAAATGTGTACAGTT+AGG 0.418331 3_1:+42919877 Msa0358170:three_prime_UTR
GAAAATAGAGGTTCTTCCTC+TGG 0.426046 3_1:-42913459 None:intergenic
AGGTTGGAGGATATTGAAAA+TGG 0.426184 3_1:+42909474 Msa0358170:CDS
AAGAAGAAGATTGAGGAAAT+GGG 0.426271 3_1:+42909255 Msa0358170:CDS
CAACTGGATCGAACGCGGTT+GGG 0.427640 3_1:+42909104 Msa0358170:CDS
TTTGCAGTGTAGAAACACTA+TGG 0.430578 3_1:+42919919 Msa0358170:three_prime_UTR
CTAGCATCAACATACCTTCC+TGG 0.436065 3_1:-42919471 None:intergenic
TTTCGCAGTCGTAAAACTCT+TGG 0.437285 3_1:+42919432 Msa0358170:intron
TGAAACTGATGATGTGTGTT+TGG 0.437905 3_1:+42909506 Msa0358170:CDS
TCGAACGCGGTTGGGCTCCA+TGG 0.438642 3_1:+42909112 Msa0358170:CDS
ATCGGGAACCGGAAGCGATA+AGG 0.446047 3_1:-42912927 None:intergenic
GTCATCGTCCTCTTCTTCTT+CGG 0.451280 3_1:-42919715 None:intergenic
TAATCACCCATATGTTGAAA+AGG 0.454207 3_1:+42913482 Msa0358170:CDS
TATTCGTGAAGCGCATAAGA+TGG 0.461672 3_1:+42909437 Msa0358170:CDS
TCCACCTCCCACCCTCTTGG+AGG 0.462311 3_1:-42909396 None:intergenic
GTGAAATAGCTTACTTGGCC+AGG 0.463440 3_1:-42909904 None:intergenic
TCTTCTTCTTCCTATACCTA+GGG 0.467526 3_1:-42909242 None:intergenic
GGGGCATTTGTTGACATTGG+TGG 0.468311 3_1:+42910584 Msa0358170:CDS
CATTTAGTCTTCAACTCCTC+CGG 0.473037 3_1:-42909330 None:intergenic
ACAACTTTGCATCTCTATCA+AGG 0.473424 3_1:+42910563 Msa0358170:CDS
GCCTCCAAGAGGGTGGGAGG+TGG 0.474279 3_1:+42909395 Msa0358170:CDS
AAAATTCATATTATCTGTCT+CGG 0.477319 3_1:+42919968 Msa0358170:three_prime_UTR
GGCGAAGAGAGTGAGGTTGG+AGG 0.479470 3_1:+42909461 Msa0358170:CDS
TAATAAGGATTTATTGGAAG+AGG 0.483601 3_1:+42909575 Msa0358170:CDS
TTCAGCATTCTGAGCAGTCT+TGG 0.493173 3_1:+42919759 Msa0358170:CDS
GACTAAATGGGCAGGACCGT+TGG 0.493791 3_1:+42909344 Msa0358170:CDS
GGGGAATTCATCGGAGGTGA+AGG 0.497266 3_1:-42909013 None:intergenic
GGAAATGGGAGTGACGGAAG+AGG 0.499634 3_1:+42909269 Msa0358170:CDS
GCAACTGGATCGAACGCGGT+TGG 0.499741 3_1:+42909103 Msa0358170:CDS
CGAACGCGGTTGGGCTCCAT+GGG 0.501706 3_1:+42909113 Msa0358170:CDS
GGTGGTTTGCGGTGGAGTAG+AGG 0.501768 3_1:-42908970 None:intergenic
GGTGAAGTTGGTTCCGCCGA+GGG 0.501884 3_1:+42909368 Msa0358170:CDS
TTGGAGGAAGGTTTCGTCGA+CGG 0.503010 3_1:-42909034 None:intergenic
AGGACCGTTGGTGGTGAAGT+TGG 0.505436 3_1:+42909356 Msa0358170:CDS
TACCCATAACAAATCAATTG+TGG 0.505792 3_1:+42919599 Msa0358170:CDS
ATCTTCTTCTTCCTATACCT+AGG 0.506020 3_1:-42909243 None:intergenic
CAAGGGGCATTTGTTGACAT+TGG 0.506627 3_1:+42910581 Msa0358170:CDS
TAAAACTCTTGGTCTGCCAT+TGG 0.506661 3_1:+42919443 Msa0358170:CDS
GAAAACAAGTGTTAAAGAGC+TGG 0.511285 3_1:+42918736 Msa0358170:intron
GATTGAGGAAATGGGAGTGA+CGG 0.512092 3_1:+42909263 Msa0358170:CDS
TAACAAATCAATTGTGGGCA+AGG 0.516562 3_1:+42919605 Msa0358170:CDS
CGGTGGTGAGAGGTGGTTTG+CGG 0.516980 3_1:-42908981 None:intergenic
GTATAGGAAGAAGAAGATTG+AGG 0.517620 3_1:+42909248 Msa0358170:CDS
GAGCTACCATTCTATTATCC+TGG 0.521386 3_1:+42909886 Msa0358170:CDS
AAGATTATCACCCTGGGAGG+AGG 0.522356 3_1:+42909723 Msa0358170:CDS
GGAGTAGAGGTGGTGGATGA+CGG 0.524591 3_1:-42908957 None:intergenic
ACCCATAACAAATCAATTGT+GGG 0.524675 3_1:+42919600 Msa0358170:CDS
TCCACAAAACGAAGTTCGAT+CGG 0.527234 3_1:-42912945 None:intergenic
CCAAGAATTCAGAAAAGAGC+AGG 0.528268 3_1:+42919559 Msa0358170:CDS
GTCAGATGAAGGTGTGTTTG+AGG 0.528608 3_1:+42919833 Msa0358170:CDS
GATTCGCCATCACATAAAAG+TGG 0.529030 3_1:+42911318 Msa0358170:CDS
TATGGGTGATTAGAAAATAG+AGG 0.529683 3_1:-42913471 None:intergenic
GGGATTGGCCTCCAAGAGGG+TGG 0.530355 3_1:+42909388 Msa0358170:CDS
TGGAAGGAAGCAAAGGATAG+AGG 0.530783 3_1:+42919223 Msa0358170:CDS
TGTGTGTTTGGATAGGTATA+AGG 0.534464 3_1:+42909518 Msa0358170:CDS
TTGCGGTGGAGTAGAGGTGG+TGG 0.538797 3_1:-42908964 None:intergenic
AGGGCCGAAGGTTTGGAGGA+AGG 0.539281 3_1:-42909046 None:intergenic
ATGAATATGATTTCATGCAT+TGG 0.539326 3_1:+42919290 Msa0358170:CDS
CACCCTGGGAGGAGGAAAAG+AGG 0.541138 3_1:+42909731 Msa0358170:CDS
GAAAAGAGGCAAGGATTACA+AGG 0.542147 3_1:+42909745 Msa0358170:CDS
CCACAAAACGAAGTTCGATC+GGG 0.542762 3_1:-42912944 None:intergenic
CAGAAAAGAGCAGGAAAGAG+AGG 0.542840 3_1:+42919568 Msa0358170:CDS
TTGTGGGCAAGGGTACTGTT+TGG 0.543222 3_1:+42919616 Msa0358170:CDS
TACCTTCCTGGCTCTTCCAA+TGG 0.543238 3_1:-42919459 None:intergenic
ACTTCTAGATTGTCAGATGA+AGG 0.543319 3_1:+42919822 Msa0358170:CDS
CCTCTTGGAGGCCAATCCCT+CGG 0.551566 3_1:-42909384 None:intergenic
TGAAGCTGCCGAAGAAGAAG+AGG 0.552730 3_1:+42919707 Msa0358170:CDS
GGATTGGCCTCCAAGAGGGT+GGG 0.552876 3_1:+42909389 Msa0358170:CDS
GGAGGAGTTGAAGACTAAAT+GGG 0.553677 3_1:+42909332 Msa0358170:CDS
TGGTGAGAGGTGGTTTGCGG+TGG 0.553772 3_1:-42908978 None:intergenic
ATTTGCAGCGTGACTGTGGA+AGG 0.554574 3_1:+42913403 Msa0358170:intron
CGAGGGATTGGCCTCCAAGA+GGG 0.557359 3_1:+42909385 Msa0358170:CDS
CAGTCTTGGTACTAATGCCT+CGG 0.561687 3_1:+42919773 Msa0358170:CDS
TTCGTCGACGGGGAATTCAT+CGG 0.563473 3_1:-42909022 None:intergenic
CTGTATCGTTATGACTATTG+GGG 0.563869 3_1:+42919531 Msa0358170:CDS
CAACTTTGCATCTCTATCAA+GGG 0.567918 3_1:+42910564 Msa0358170:CDS
AAGTGAAGAGATAAGAATTG+GGG 0.569311 3_1:-42908894 None:intergenic
GAGGACTTTCAGGATCATAC+TGG 0.569600 3_1:-42919509 None:intergenic
CCTATTCCTAGAAAAGATCC+AGG 0.570936 3_1:+42913429 Msa0358170:CDS
ATTGCAGATTTGTGTGGGGA+AGG 0.573789 3_1:+42910538 Msa0358170:intron
TAAATGGGCAGGACCGTTGG+TGG 0.575306 3_1:+42909347 Msa0358170:CDS
ACTTGGCCAGGATAATAGAA+TGG 0.577181 3_1:-42909892 None:intergenic
CATTGATCAGAGACATCAGC+TGG 0.577556 3_1:+42919338 Msa0358170:CDS
AGAGGCAAGGATTACAAGGA+TGG 0.582813 3_1:+42909749 Msa0358170:CDS
TCGTCACGGTGAAATATTGG+TGG 0.584435 3_1:-42913130 None:intergenic
AACAAATCAATTGTGGGCAA+GGG 0.585346 3_1:+42919606 Msa0358170:CDS
TTAGCGACGGTGGTGAGAGG+TGG 0.586163 3_1:-42908988 None:intergenic
GAAACCTTCCTCCAAACCTT+CGG 0.586186 3_1:+42909042 Msa0358170:CDS
GGTTTGCGGTGGAGTAGAGG+TGG 0.586982 3_1:-42908967 None:intergenic
GAGTTGAAGACTAAATGGGC+AGG 0.587356 3_1:+42909336 Msa0358170:CDS
AGAAGTTCCTCTGAGCTCGC+CGG 0.588098 3_1:+42909191 Msa0358170:CDS
GGAACCAACTTCACCACCAA+CGG 0.589853 3_1:-42909360 None:intergenic
GAAACTATGGAAGGAAGCAA+AGG 0.590045 3_1:+42919216 Msa0358170:CDS
ATGACGGTGGAATAAGGGAG+AGG 0.591429 3_1:-42908941 None:intergenic
TGCCATTGGAAGAGCCAGGA+AGG 0.593450 3_1:+42919457 Msa0358170:CDS
CACCGTAATTTCAACAATGA+CGG 0.593948 3_1:-42911347 None:intergenic
TTTGAAACAGTATAATGAGT+GGG 0.596431 3_1:+42909545 Msa0358170:CDS
GGCTGCACTTGCTGAGCGTG+AGG 0.597650 3_1:+42918766 Msa0358170:CDS
TAAAATTTGCAGCGTGACTG+TGG 0.599739 3_1:+42913399 Msa0358170:intron
CTAAAAGCTTCAATCGACTC+CGG 0.600045 3_1:-42909210 None:intergenic
GGAGTGAGAATCTCTTCCCA+TGG 0.601535 3_1:-42909129 None:intergenic
ATTGAAGCGCAATATTGAGA+TGG 0.601634 3_1:+42919267 Msa0358170:CDS
AGATGGAGGCGAAGAGAGTG+AGG 0.602803 3_1:+42909454 Msa0358170:CDS
TGGTGAAGTTGGTTCCGCCG+AGG 0.603337 3_1:+42909367 Msa0358170:CDS
CTGATGATGTGTGTTTGGAT+AGG 0.603876 3_1:+42909511 Msa0358170:CDS
AACCGCGTTCGATCCAGTTG+CGG 0.604282 3_1:-42909101 None:intergenic
GGTCTGCCATTGGAAGAGCC+AGG 0.606197 3_1:+42919453 Msa0358170:CDS
ATACTAATCCAGATGAATTG+CGG 0.608071 3_1:+42913155 Msa0358170:CDS
GTAGAGGTGGTGGATGACGG+TGG 0.611103 3_1:-42908954 None:intergenic
CGCCGCAACTGGATCGAACG+CGG 0.614662 3_1:+42909099 Msa0358170:CDS
GATTTAGCGACGGTGGTGAG+AGG 0.616242 3_1:-42908991 None:intergenic
CGTCACGGTGAAATATTGGT+GGG 0.618017 3_1:-42913129 None:intergenic
CTCCTGAAGCCGAATTCGCG+CGG 0.619073 3_1:+42909148 Msa0358170:CDS
AACTTTGCATCTCTATCAAG+GGG 0.623804 3_1:+42910565 Msa0358170:CDS
GGAAGCAAAGGATAGAGGTG+AGG 0.624007 3_1:+42919228 Msa0358170:CDS
CAAGGATTACAAGGATGGCA+TGG 0.624035 3_1:+42909754 Msa0358170:CDS
TGACGGTGGAATAAGGGAGA+GGG 0.624820 3_1:-42908940 None:intergenic
GGAGGAAGGTTTCGTCGACG+GGG 0.625945 3_1:-42909032 None:intergenic
CCGAGGGATTGGCCTCCAAG+AGG 0.628072 3_1:+42909384 Msa0358170:CDS
ATTGACACCAACGATAGGCT+AGG 0.628680 3_1:-42920033 None:intergenic
CTGGATTAGTATCTTCGTCA+CGG 0.631090 3_1:-42913144 None:intergenic
TAGACCAAGATTATCACCCT+GGG 0.632469 3_1:+42909717 Msa0358170:CDS
GCTCCATAAGAAACTATGGA+AGG 0.637472 3_1:+42919207 Msa0358170:intron
GAAACAGTATAATGAGTGGG+TGG 0.642722 3_1:+42909548 Msa0358170:CDS
CTTGGAGGCCAATCCCTCGG+CGG 0.651664 3_1:-42909381 None:intergenic
TGGGAGGAGGAAAAGAGGCA+AGG 0.652268 3_1:+42909736 Msa0358170:CDS
TTAGACCAAGATTATCACCC+TGG 0.654734 3_1:+42909716 Msa0358170:CDS
TCGTGAAGCGCATAAGATGG+AGG 0.656006 3_1:+42909440 Msa0358170:CDS
GTCGACGGGGAATTCATCGG+AGG 0.657587 3_1:-42909019 None:intergenic
ATTCGCCATCACATAAAAGT+GGG 0.657615 3_1:+42911319 Msa0358170:CDS
AGATCCAGGAGACAAGCCAG+AGG 0.658333 3_1:+42913443 Msa0358170:CDS
GTTGACGAGTATTCAAAGCA+AGG 0.659920 3_1:+42919684 Msa0358170:CDS
ACATTGGTGGAGTATACGAT+GGG 0.660404 3_1:+42910597 Msa0358170:CDS
TTTCATTGCAGATTTGTGTG+GGG 0.663073 3_1:+42910534 Msa0358170:intron
ATTAACATGAATTTGATCCG+AGG 0.664175 3_1:-42919790 None:intergenic
ATCGACTCCGGCGAGCTCAG+AGG 0.664940 3_1:-42909198 None:intergenic
GATTAAGGAAGATGTTCCGG+AGG 0.668281 3_1:+42909314 Msa0358170:CDS
GGTGAAGGATTTAGCGACGG+TGG 0.677063 3_1:-42908998 None:intergenic
TGTATCGTTATGACTATTGG+GGG 0.680322 3_1:+42919532 Msa0358170:CDS
GGAGGTGAAGGATTTAGCGA+CGG 0.690162 3_1:-42909001 None:intergenic
ACCAAGATTATCACCCTGGG+AGG 0.694247 3_1:+42909720 Msa0358170:CDS
GTATCGTTATGACTATTGGG+GGG 0.697338 3_1:+42919533 Msa0358170:CDS
GACATTGGTGGAGTATACGA+TGG 0.698114 3_1:+42910596 Msa0358170:CDS
CAATAGTCATAACGATACAG+AGG 0.724869 3_1:-42919528 None:intergenic
GCGCGGACGAGTCTCAACGA+AGG 0.736916 3_1:+42909165 Msa0358170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAGTAAATAAATATGT+AGG + chr3_1:42910472-42910491 Msa0358170:intron 10.0%
!! TTGAAATTTAAAAAACTTAA+AGG - chr3_1:42915961-42915980 None:intergenic 10.0%
!!! AAGTTTTTTAAATTTCAAAT+AGG + chr3_1:42915963-42915982 Msa0358170:intron 10.0%
!!! TATAAGCAAAAATTATTTTT+TGG + chr3_1:42916258-42916277 Msa0358170:intron 10.0%
!! ATTTAAATGAATTAATTTCT+TGG + chr3_1:42916366-42916385 Msa0358170:intron 10.0%
!! ATATAATACATATATTATAG+GGG - chr3_1:42916545-42916564 None:intergenic 10.0%
!! CATATAATACATATATTATA+GGG - chr3_1:42916546-42916565 None:intergenic 10.0%
!! ACATATAATACATATATTAT+AGG - chr3_1:42916547-42916566 None:intergenic 10.0%
!!! TAAAAATATTTTCTTGTTAT+TGG + chr3_1:42918812-42918831 Msa0358170:intron 10.0%
!! AGTTAAAAAAAACTACAATT+TGG - chr3_1:42911477-42911496 None:intergenic 15.0%
!! GTTGCAATTTATATAATATT+TGG + chr3_1:42912115-42912134 Msa0358170:intron 15.0%
!!! TTTCAAAGTATTTATGTATT+TGG + chr3_1:42912272-42912291 Msa0358170:intron 15.0%
!!! CTTTTTTGCATTTTTTTTAT+AGG + chr3_1:42912749-42912768 Msa0358170:intron 15.0%
!! ATTAATCCTGATAAATATAA+AGG + chr3_1:42915527-42915546 Msa0358170:CDS 15.0%
!!! AAGTTTTTTAAGTTTCAAAT+AGG - chr3_1:42916074-42916093 None:intergenic 15.0%
!! TTGAAACTTAAAAAACTTAA+AGG + chr3_1:42916076-42916095 Msa0358170:intron 15.0%
!!! AAGTTTTATAAGTTTCAAAT+AGG - chr3_1:42916103-42916122 None:intergenic 15.0%
!! AAAACTAAAGTAAAAAGATA+AGG - chr3_1:42917213-42917232 None:intergenic 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG + chr3_1:42917212-42917231 Msa0358170:intron 15.0%
!! TTTGTTTATCAATATATTTG+AGG - chr3_1:42918187-42918206 None:intergenic 15.0%
!!! TTACATATTGTTTTTAACTT+TGG + chr3_1:42918711-42918730 Msa0358170:intron 15.0%
!! TAAATAAATATGTAGGATTG+AGG + chr3_1:42910479-42910498 Msa0358170:intron 20.0%
!! AATGTTTAATCAATATCATG+TGG + chr3_1:42910777-42910796 Msa0358170:intron 20.0%
!! ACTGTATTATCAAGTATATA+AGG - chr3_1:42911424-42911443 None:intergenic 20.0%
!!! TTATGTTCATGTTTTGAAAT+AGG + chr3_1:42911540-42911559 Msa0358170:intron 20.0%
!! ATAAAGAAAAATTTCAAGGA+GGG - chr3_1:42912299-42912318 None:intergenic 20.0%
!! AAGGATAAAGAAAAATTTCA+AGG - chr3_1:42912303-42912322 None:intergenic 20.0%
!!! ATTTTTTTTATAGGCAATGT+AGG + chr3_1:42912758-42912777 Msa0358170:intron 20.0%
!! TTTGTACTTCTTTATTAGAA+TGG - chr3_1:42913815-42913834 None:intergenic 20.0%
!!! AATCTATTCAATTAGTTTTG+TGG - chr3_1:42913980-42913999 None:intergenic 20.0%
!! AAAACTAATTGAATAGATTG+AGG + chr3_1:42913981-42914000 Msa0358170:intron 20.0%
!! CATAATATTGTGTGATAATA+TGG + chr3_1:42914203-42914222 Msa0358170:intron 20.0%
!!! TAATTTTAGTCAGGAAATAA+TGG - chr3_1:42914265-42914284 None:intergenic 20.0%
!! AAAGGCAAAAAATCAAATAA+AGG - chr3_1:42914584-42914603 None:intergenic 20.0%
!! ACAATTTATAATGATTCTAC+TGG + chr3_1:42915062-42915081 Msa0358170:intron 20.0%
!! CAATTTATAATGATTCTACT+GGG + chr3_1:42915063-42915082 Msa0358170:intron 20.0%
!! ACTAAGAAATAGAATTAAGA+GGG + chr3_1:42915150-42915169 Msa0358170:intron 20.0%
!!! AAAAAAAAGTATTCTTGTGA+TGG - chr3_1:42915446-42915465 None:intergenic 20.0%
!!! TTTTTTTTTTTTTGCAGTTG+TGG + chr3_1:42915462-42915481 Msa0358170:intron 20.0%
!!! TTTTTGCCTTTATATTTATC+AGG - chr3_1:42915536-42915555 None:intergenic 20.0%
!! ATTAGTACCAAAAATAACTA+TGG + chr3_1:42915634-42915653 Msa0358170:CDS 20.0%
!! TTCAAATGTTAATATAGTTC+TGG + chr3_1:42915887-42915906 Msa0358170:intron 20.0%
!! TTTCAAATAGATCCTTAAAA+GGG - chr3_1:42915998-42916017 None:intergenic 20.0%
!! TATATTGAAATTATCTACTC+TGG + chr3_1:42916228-42916247 Msa0358170:intron 20.0%
!!! TTGTTTTGAATTAGAAATCA+AGG + chr3_1:42916591-42916610 Msa0358170:intron 20.0%
!! TTACATGGTTTAAATATCTT+GGG + chr3_1:42917478-42917497 Msa0358170:intron 20.0%
!! GTTCTATCAAAAATCATATT+TGG - chr3_1:42917995-42918014 None:intergenic 20.0%
!!! ATTTGAGGTATTACAAAAAA+AGG - chr3_1:42918172-42918191 None:intergenic 20.0%
!! TAATCCAATTTAAACTGATT+TGG + chr3_1:42918628-42918647 Msa0358170:intron 20.0%
!! AAAACCAAATCAGTTTAAAT+TGG - chr3_1:42918635-42918654 None:intergenic 20.0%
!! ATATCAAGCTTATGAAAAAA+GGG - chr3_1:42918927-42918946 None:intergenic 20.0%
!! GAAAATTATCAAACAATCAT+AGG - chr3_1:42919033-42919052 None:intergenic 20.0%
!! TAAGACTTCAGTTTAATATA+AGG + chr3_1:42919131-42919150 Msa0358170:intron 20.0%
!! AAAATTCATATTATCTGTCT+CGG + chr3_1:42919968-42919987 Msa0358170:three_prime_UTR 20.0%
! AAAGTGAAGAGATAAGAATT+GGG - chr3_1:42908898-42908917 None:intergenic 25.0%
!!! TTTTGAAACAGTATAATGAG+TGG + chr3_1:42909544-42909563 Msa0358170:CDS 25.0%
!! TTTGAAACAGTATAATGAGT+GGG + chr3_1:42909545-42909564 Msa0358170:CDS 25.0%
! TAATAAGGATTTATTGGAAG+AGG + chr3_1:42909575-42909594 Msa0358170:CDS 25.0%
!!! GCATTCATAGTTTTTTGATT+TGG + chr3_1:42909650-42909669 Msa0358170:intron 25.0%
!!! GTTTTTTGATTTGGTTTATG+TGG + chr3_1:42909659-42909678 Msa0358170:intron 25.0%
!!! GATTCTTTTTTTACGTTTGT+AGG + chr3_1:42909796-42909815 Msa0358170:intron 25.0%
!! TTTTTACGTTTGTAGGTATT+TGG + chr3_1:42909803-42909822 Msa0358170:intron 25.0%
! TTCTTAGTTCATACTCATTA+TGG + chr3_1:42909929-42909948 Msa0358170:intron 25.0%
!!! TCACAGTTTTTTCTTCTTTT+TGG + chr3_1:42910329-42910348 Msa0358170:intron 25.0%
! ACAAAAATAGGATCATCTAA+TGG - chr3_1:42910400-42910419 None:intergenic 25.0%
!!! TAGATGATCCTATTTTTGTT+TGG + chr3_1:42910401-42910420 Msa0358170:intron 25.0%
! AAATGAAGCCAAACAAAAAT+AGG - chr3_1:42910412-42910431 None:intergenic 25.0%
! CTTGTTAAATCTTTAGACTT+TGG + chr3_1:42910914-42910933 Msa0358170:intron 25.0%
!! TGAATAGTTTTCAGTAAACT+GGG - chr3_1:42911012-42911031 None:intergenic 25.0%
!! TTGAATAGTTTTCAGTAAAC+TGG - chr3_1:42911013-42911032 None:intergenic 25.0%
! TTCCTATAAAGAACAATGAT+TGG + chr3_1:42911290-42911309 Msa0358170:CDS 25.0%
! AACCAATCATTGTTCTTTAT+AGG - chr3_1:42911295-42911314 None:intergenic 25.0%
!!! TAAAGAACAATGATTGGTTT+TGG + chr3_1:42911296-42911315 Msa0358170:CDS 25.0%
!! TATACTTGATAATACAGTGA+TGG + chr3_1:42911426-42911445 Msa0358170:intron 25.0%
! AAAAAAAACTACAATTTGGC+AGG - chr3_1:42911473-42911492 None:intergenic 25.0%
!!! GTTTTTTTTAACTCATCGAT+AGG + chr3_1:42911484-42911503 Msa0358170:intron 25.0%
! AGCTCAAATTGTATTATACA+AGG + chr3_1:42911569-42911588 Msa0358170:intron 25.0%
!! TTCTTTTATTCGTCCATTTT+TGG + chr3_1:42911841-42911860 Msa0358170:intron 25.0%
! AACGTAAATTTAAGAAGTGA+GGG - chr3_1:42911921-42911940 None:intergenic 25.0%
!! TGCAATTTAAAATCTACTTG+TGG + chr3_1:42912156-42912175 Msa0358170:intron 25.0%
!! GCAATTTAAAATCTACTTGT+GGG + chr3_1:42912157-42912176 Msa0358170:intron 25.0%
! GATAAAGAAAAATTTCAAGG+AGG - chr3_1:42912300-42912319 None:intergenic 25.0%
! TGAGGAAGATCTATAAAAAA+AGG - chr3_1:42912322-42912341 None:intergenic 25.0%
! CTAACAAAGTTACAAATTTG+AGG - chr3_1:42912340-42912359 None:intergenic 25.0%
! ATGCAAAAAAGCTTAAAGTA+AGG - chr3_1:42912740-42912759 None:intergenic 25.0%
! AGTTCAATTATATCCTTGTT+TGG + chr3_1:42912824-42912843 Msa0358170:intron 25.0%
!! CATTCACATTTTTACTTTGT+AGG + chr3_1:42912893-42912912 Msa0358170:intron 25.0%
! TACATCAGATGATCTATATT+TGG - chr3_1:42912972-42912991 None:intergenic 25.0%
! AAAAATCTGCAAAAAGATTG+AGG - chr3_1:42913203-42913222 None:intergenic 25.0%
!! AACATACCTTTTCAACATAT+GGG - chr3_1:42913491-42913510 None:intergenic 25.0%
! TTAGAATGTTCGTTCTTATT+TGG - chr3_1:42913712-42913731 None:intergenic 25.0%
! AATAAGAACGAACATTCTAA+AGG + chr3_1:42913712-42913731 Msa0358170:intron 25.0%
!!! ATATGCTATTTTTTGTCACT+AGG + chr3_1:42913862-42913881 Msa0358170:intron 25.0%
! TTAAGAGTCAAAATCAACAA+AGG - chr3_1:42914179-42914198 None:intergenic 25.0%
! AATATGGATCCCAAATAAAT+TGG + chr3_1:42914219-42914238 Msa0358170:intron 25.0%
!!! CAGTTATACTAATTTTAGTC+AGG - chr3_1:42914274-42914293 None:intergenic 25.0%
! TAAAATTAGTATAACTGCTC+TGG + chr3_1:42914277-42914296 Msa0358170:intron 25.0%
! TCTCAATATCTATTGAACAT+AGG - chr3_1:42914396-42914415 None:intergenic 25.0%
! ATAACATACTTACTATAGCA+TGG + chr3_1:42914468-42914487 Msa0358170:intron 25.0%
! ATGGCAATGCAATTATAATA+TGG + chr3_1:42914487-42914506 Msa0358170:intron 25.0%
! AATGCAATTATAATATGGAC+TGG + chr3_1:42914492-42914511 Msa0358170:intron 25.0%
! TTTCATTGTTTAGACATCAA+AGG - chr3_1:42914602-42914621 None:intergenic 25.0%
! TGATGTCTAAACAATGAAAT+AGG + chr3_1:42914603-42914622 Msa0358170:intron 25.0%
! GATGTCTAAACAATGAAATA+GGG + chr3_1:42914604-42914623 Msa0358170:intron 25.0%
! TTTCATAGTGATGTAGTTAT+AGG - chr3_1:42914669-42914688 None:intergenic 25.0%
! ACATCACTATGAAAATAGAA+TGG + chr3_1:42914675-42914694 Msa0358170:intron 25.0%
! AAAAATGTTACCACAATACT+CGG - chr3_1:42914781-42914800 None:intergenic 25.0%
! CACTAAGAAATAGAATTAAG+AGG + chr3_1:42915149-42915168 Msa0358170:intron 25.0%
! CTAAGAAATAGAATTAAGAG+GGG + chr3_1:42915151-42915170 Msa0358170:intron 25.0%
!!! ATTATCCAATCATTGATTTC+AGG - chr3_1:42915413-42915432 None:intergenic 25.0%
!! GCAAATGATTTTGAATGATA+TGG + chr3_1:42915502-42915521 Msa0358170:CDS 25.0%
!! TTCTATTCTTATTGTTGTTC+TGG + chr3_1:42915661-42915680 Msa0358170:intron 25.0%
!!! TCATTGCTTTTTTTGTTGAA+TGG - chr3_1:42915840-42915859 None:intergenic 25.0%
! ACTTTAAACCAGATCTATAT+TGG + chr3_1:42915860-42915879 Msa0358170:intron 25.0%
!!! TAAAGGACTAAAAAGGTATT+TGG - chr3_1:42915913-42915932 None:intergenic 25.0%
! TCAAACTTAAAGGACTAAAA+AGG - chr3_1:42915920-42915939 None:intergenic 25.0%
!! TTTAAGTTTGACAAAAGTAC+CGG + chr3_1:42915929-42915948 Msa0358170:intron 25.0%
! GTTTCAAATAGATCCTTAAA+AGG - chr3_1:42915999-42916018 None:intergenic 25.0%
! TTAAGTTTGACAAAAATACC+AGG - chr3_1:42916136-42916155 None:intergenic 25.0%
!!! GGTATTTTTGTCAAACTTAA+AGG + chr3_1:42916136-42916155 Msa0358170:intron 25.0%
! AAAATGCTAAACTAAATGAC+GGG - chr3_1:42916344-42916363 None:intergenic 25.0%
! CAAAATGCTAAACTAAATGA+CGG - chr3_1:42916345-42916364 None:intergenic 25.0%
! ATGAATTAATTTCTTGGTCA+TGG + chr3_1:42916372-42916391 Msa0358170:intron 25.0%
! TCCTTAAATAAGTTGTTCTA+GGG + chr3_1:42916640-42916659 Msa0358170:intron 25.0%
!!! ACACTTAGTTTTCATTGATT+TGG + chr3_1:42916999-42917018 Msa0358170:intron 25.0%
!! GTAGATTTTCCCATAATAAT+AGG + chr3_1:42917162-42917181 Msa0358170:intron 25.0%
! AGTAAAAAGATAAGGACTTA+GGG - chr3_1:42917205-42917224 None:intergenic 25.0%
! AAGTAAAAAGATAAGGACTT+AGG - chr3_1:42917206-42917225 None:intergenic 25.0%
! TATTTAAACCATGTAACTTG+AGG - chr3_1:42917474-42917493 None:intergenic 25.0%
! GTTACATGGTTTAAATATCT+TGG + chr3_1:42917477-42917496 Msa0358170:intron 25.0%
! TAAATCATCGTATTTAAGCT+GGG + chr3_1:42917538-42917557 Msa0358170:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + chr3_1:42917813-42917832 Msa0358170:intron 25.0%
!! TTTTCTAATGGTTTATCGAA+TGG - chr3_1:42917948-42917967 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG + chr3_1:42917955-42917974 Msa0358170:intron 25.0%
! TGAGTTTATCTCATGATATA+TGG - chr3_1:42918120-42918139 None:intergenic 25.0%
!! ATGGCGTGTAATTTTATTAA+GGG + chr3_1:42918431-42918450 Msa0358170:intron 25.0%
! GATATCAAGCTTATGAAAAA+AGG - chr3_1:42918928-42918947 None:intergenic 25.0%
!!! CTAAAAAGTTGGTAAGATTT+TGG - chr3_1:42918986-42919005 None:intergenic 25.0%
!! GAAGTACATTTCTAAAAAGT+TGG - chr3_1:42918997-42919016 None:intergenic 25.0%
! AATATCCATAACAAGACAAA+AGG - chr3_1:42919068-42919087 None:intergenic 25.0%
! ATGAATATGATTTCATGCAT+TGG + chr3_1:42919290-42919309 Msa0358170:CDS 25.0%
!!! TATGTTGATGCTAGTTTTTT+TGG + chr3_1:42919480-42919499 Msa0358170:CDS 25.0%
AAGTGAAGAGATAAGAATTG+GGG - chr3_1:42908897-42908916 None:intergenic 30.0%
GAAAGTGAAGAGATAAGAAT+TGG - chr3_1:42908899-42908918 None:intergenic 30.0%
! GTTTAAGGTTTAAGGGTTTA+GGG - chr3_1:42908921-42908940 None:intergenic 30.0%
!!! CTTCAGATTCTTTGGTTTTA+GGG - chr3_1:42909068-42909087 None:intergenic 30.0%
!!! TCTTCAGATTCTTTGGTTTT+AGG - chr3_1:42909069-42909088 None:intergenic 30.0%
AAGAAGAAGATTGAGGAAAT+GGG + chr3_1:42909255-42909274 Msa0358170:CDS 30.0%
GGAAGCTAATAAGGATTTAT+TGG + chr3_1:42909569-42909588 Msa0358170:CDS 30.0%
ATTGGAAGAGGAATCTTATA+AGG + chr3_1:42909587-42909606 Msa0358170:CDS 30.0%
TGAGAGAGTAAAATTGTTCT+GGG + chr3_1:42909830-42909849 Msa0358170:intron 30.0%
GAATTGTGAAATAGCTTACT+TGG - chr3_1:42909912-42909931 None:intergenic 30.0%
TGAAAACAGACTAATACCAT+AGG - chr3_1:42910025-42910044 None:intergenic 30.0%
GTTTCGAATTACTGCTATTA+TGG + chr3_1:42910058-42910077 Msa0358170:intron 30.0%
!!! CTATTATGGTTTTATGCACA+CGG + chr3_1:42910072-42910091 Msa0358170:intron 30.0%
!!! TATTATGGTTTTATGCACAC+GGG + chr3_1:42910073-42910092 Msa0358170:intron 30.0%
! TGGAAGAAACTGATTTCATA+TGG + chr3_1:42910127-42910146 Msa0358170:intron 30.0%
! AAGAAACTGATTTCATATGG+CGG + chr3_1:42910130-42910149 Msa0358170:intron 30.0%
!! TACATTTTTCAATTGCTGAC+TGG + chr3_1:42910245-42910264 Msa0358170:intron 30.0%
TAACCGAATTTACCCTTTAA+TGG + chr3_1:42910293-42910312 Msa0358170:intron 30.0%
CTTCCATTAAAGGGTAAATT+CGG - chr3_1:42910299-42910318 None:intergenic 30.0%
AACATGATGCTTCCATTAAA+GGG - chr3_1:42910308-42910327 None:intergenic 30.0%
CAAATACAGTTGTCCAATTA+GGG - chr3_1:42910373-42910392 None:intergenic 30.0%
ACAAATACAGTTGTCCAATT+AGG - chr3_1:42910374-42910393 None:intergenic 30.0%
! TTTTTCATTGCAGATTTGTG+TGG + chr3_1:42910532-42910551 Msa0358170:intron 30.0%
! TTTTCATTGCAGATTTGTGT+GGG + chr3_1:42910533-42910552 Msa0358170:intron 30.0%
TTAAGGGAACACTTAAAAGA+TGG - chr3_1:42910642-42910661 None:intergenic 30.0%
!! TCCCTTAACTTTTTCTGTAT+TGG + chr3_1:42910654-42910673 Msa0358170:intron 30.0%
CCCAATACAGAAAAAGTTAA+GGG - chr3_1:42910658-42910677 None:intergenic 30.0%
!! CCCTTAACTTTTTCTGTATT+GGG + chr3_1:42910655-42910674 Msa0358170:intron 30.0%
ACCCAATACAGAAAAAGTTA+AGG - chr3_1:42910659-42910678 None:intergenic 30.0%
! TGTTCATTTCCTCATTGTTT+TGG + chr3_1:42910678-42910697 Msa0358170:intron 30.0%
ACTTAGCAAGAATATCATTG+TGG - chr3_1:42910733-42910752 None:intergenic 30.0%
TATCATGTGGTGCAATAAAT+TGG + chr3_1:42910790-42910809 Msa0358170:intron 30.0%
ATCATGTGGTGCAATAAATT+GGG + chr3_1:42910791-42910810 Msa0358170:intron 30.0%
CTAAAGATTTAACAAGTCTC+AGG - chr3_1:42910910-42910929 None:intergenic 30.0%
AGAAAATATGCAATAACCCA+TGG - chr3_1:42911101-42911120 None:intergenic 30.0%
TGTTATCACGAGTAACTTAT+AGG + chr3_1:42911159-42911178 Msa0358170:intron 30.0%
! CTTTTATGCAAGTTTTCTTC+TGG + chr3_1:42911234-42911253 Msa0358170:intron 30.0%
TAAGTATTAAGTGACAAGTG+TGG - chr3_1:42911401-42911420 None:intergenic 30.0%
AATGGACGAATAAAAGAAAG+AGG - chr3_1:42911839-42911858 None:intergenic 30.0%
!!! TCCATTTTTGGTACTAAGAA+AGG + chr3_1:42911853-42911872 Msa0358170:intron 30.0%
ACGTAAATTTAAGAAGTGAG+GGG - chr3_1:42911920-42911939 None:intergenic 30.0%
GAACGTAAATTTAAGAAGTG+AGG - chr3_1:42911922-42911941 None:intergenic 30.0%
!! GTTACATACTTGACTTGTAT+TGG + chr3_1:42912239-42912258 Msa0358170:intron 30.0%
! ATAGTGGAAAGTTGAAACAA+GGG - chr3_1:42912660-42912679 None:intergenic 30.0%
! TATAGTGGAAAGTTGAAACA+AGG - chr3_1:42912661-42912680 None:intergenic 30.0%
GGTTAAATGGTGAATTATAG+TGG - chr3_1:42912676-42912695 None:intergenic 30.0%
! TTTTTATAGGCAATGTAGGT+AGG + chr3_1:42912762-42912781 Msa0358170:intron 30.0%
CATTACAAGAAAACCACTTA+TGG - chr3_1:42912850-42912869 None:intergenic 30.0%
ATACTAATCCAGATGAATTG+CGG + chr3_1:42913155-42913174 Msa0358170:CDS 30.0%
AAAAAGATTGAGGTGGTTTA+GGG - chr3_1:42913193-42913212 None:intergenic 30.0%
ACTCGTTAAAAACAAAAGCA+TGG - chr3_1:42913290-42913309 None:intergenic 30.0%
TATGGGTGATTAGAAAATAG+AGG - chr3_1:42913474-42913493 None:intergenic 30.0%
TAATCACCCATATGTTGAAA+AGG + chr3_1:42913482-42913501 Msa0358170:CDS 30.0%
! GAACATACCTTTTCAACATA+TGG - chr3_1:42913492-42913511 None:intergenic 30.0%
! GTTGAAAAGGTATGTTCTTA+TGG + chr3_1:42913495-42913514 Msa0358170:intron 30.0%
TGTAAATAGGATCTTGAATG+GGG - chr3_1:42913672-42913691 None:intergenic 30.0%
GTGTAAATAGGATCTTGAAT+GGG - chr3_1:42913673-42913692 None:intergenic 30.0%
ACATTTATGCAGGTGTAAAT+AGG - chr3_1:42913685-42913704 None:intergenic 30.0%
!! TGATCTCATCAACCTTATTT+TGG + chr3_1:42913917-42913936 Msa0358170:intron 30.0%
AGTTGATCAGTACCAAAATA+AGG - chr3_1:42913932-42913951 None:intergenic 30.0%
! GTGCCATTGTAAAAAATATG+AGG + chr3_1:42913954-42913973 Msa0358170:intron 30.0%
!!! TGGCCTCATATTTTTTACAA+TGG - chr3_1:42913960-42913979 None:intergenic 30.0%
TGCTTATGATTCAGTCATTA+TGG + chr3_1:42914008-42914027 Msa0358170:intron 30.0%
ATTATGGTAACAATGTTCCT+GGG + chr3_1:42914024-42914043 Msa0358170:intron 30.0%
! TGTAATGGAATTATCAGAGT+GGG - chr3_1:42914096-42914115 None:intergenic 30.0%
! ATGTAATGGAATTATCAGAG+TGG - chr3_1:42914097-42914116 None:intergenic 30.0%
TATATGAGCTAGTCATGTAA+TGG - chr3_1:42914111-42914130 None:intergenic 30.0%
AAAAAGCGGCCAATTTATTT+GGG - chr3_1:42914231-42914250 None:intergenic 30.0%
TAAAAAGCGGCCAATTTATT+TGG - chr3_1:42914232-42914251 None:intergenic 30.0%
CAATATCTATTGAACATAGG+TGG - chr3_1:42914393-42914412 None:intergenic 30.0%
!! CAATTATAATATGGACTGGT+AGG + chr3_1:42914496-42914515 Msa0358170:intron 30.0%
ACTAAGTAATCTGTACTGTT+AGG + chr3_1:42914534-42914553 Msa0358170:intron 30.0%
GGCAAAAAATCAAATAAAGG+AGG - chr3_1:42914581-42914600 None:intergenic 30.0%
AATAGGGCAATAAGTAACAA+AGG + chr3_1:42914620-42914639 Msa0358170:intron 30.0%
! GCAATAAGTAACAAAGGTAT+TGG + chr3_1:42914626-42914645 Msa0358170:intron 30.0%
!! AAGTAACAAAGGTATTGGTT+AGG + chr3_1:42914631-42914650 Msa0358170:intron 30.0%
!! TATTTTATGTCCGAGTATTG+TGG + chr3_1:42914768-42914787 Msa0358170:intron 30.0%
GTTTCATGACGAATGAAATT+TGG + chr3_1:42914952-42914971 Msa0358170:intron 30.0%
TGAAACTTAATGATATGCGA+CGG + chr3_1:42914995-42915014 Msa0358170:intron 30.0%
ATAAATTGTGACGCAAAGTA+TGG - chr3_1:42915051-42915070 None:intergenic 30.0%
TCTTTCCTGAAATCAATGAT+TGG + chr3_1:42915405-42915424 Msa0358170:intron 30.0%
GGTACTAATGCATTCTTATA+AGG - chr3_1:42915623-42915642 None:intergenic 30.0%
!! GAACTCACCATAGTTATTTT+TGG - chr3_1:42915644-42915663 None:intergenic 30.0%
TAACTAATCTTGTACGACTT+AGG + chr3_1:42915741-42915760 Msa0358170:intron 30.0%
TAATATTTACTCCTCCATCT+GGG - chr3_1:42915794-42915813 None:intergenic 30.0%
TTAATATTTACTCCTCCATC+TGG - chr3_1:42915795-42915814 None:intergenic 30.0%
! TGAAGTATCCAATATAGATC+TGG - chr3_1:42915871-42915890 None:intergenic 30.0%
! GGTACTTTTGTCAAACTTAA+AGG - chr3_1:42915930-42915949 None:intergenic 30.0%
!! TTAAGTTTGACAAAAGTACC+GGG + chr3_1:42915930-42915949 Msa0358170:intron 30.0%
AAAAACTTAAAGGACTAACC+CGG - chr3_1:42915951-42915970 None:intergenic 30.0%
AGATCCTTAAAAGGGTAATA+AGG - chr3_1:42915990-42916009 None:intergenic 30.0%
! TAAAACTTAAAGCACTAACC+TGG + chr3_1:42916115-42916134 Msa0358170:intron 30.0%
TCAAACTTAAAGGACACAAA+AGG + chr3_1:42916146-42916165 Msa0358170:intron 30.0%
ATTAATTTCTTGGTCATGGA+AGG + chr3_1:42916376-42916395 Msa0358170:intron 30.0%
TGTTTGCTTATATTCCTTTG+CGG + chr3_1:42916488-42916507 Msa0358170:intron 30.0%
CTCCTTAAATAAGTTGTTCT+AGG + chr3_1:42916639-42916658 Msa0358170:intron 30.0%
TCCCTAGAACAACTTATTTA+AGG - chr3_1:42916644-42916663 None:intergenic 30.0%
TATCCGATCTATAAGAACAA+GGG + chr3_1:42916769-42916788 Msa0358170:intron 30.0%
!!! AGTTTTCATTGATTTGGAGA+AGG + chr3_1:42917005-42917024 Msa0358170:intron 30.0%
!!! TTTAGTTTTGGATGTACTGA+CGG + chr3_1:42917224-42917243 Msa0358170:intron 30.0%
ATATCATACCTCAAGTTACA+TGG + chr3_1:42917463-42917482 Msa0358170:intron 30.0%
GTAAATCATCGTATTTAAGC+TGG + chr3_1:42917537-42917556 Msa0358170:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG - chr3_1:42917809-42917828 None:intergenic 30.0%
TTGATCTACTCTTCTTACAA+CGG - chr3_1:42917879-42917898 None:intergenic 30.0%
TGTAAGAAGAGTAGATCAAA+TGG + chr3_1:42917880-42917899 Msa0358170:intron 30.0%
! GTTTATCGAATGGTTTTCTT+AGG - chr3_1:42917938-42917957 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - chr3_1:42917960-42917979 None:intergenic 30.0%
! TGATTTTTGATAGAACGCTA+TGG + chr3_1:42917999-42918018 Msa0358170:intron 30.0%
ATGGACTTACATTAGTGTTT+AGG - chr3_1:42918101-42918120 None:intergenic 30.0%
CCAAATCAGTTACAAGTATA+GGG + chr3_1:42918220-42918239 Msa0358170:intron 30.0%
!! GTCTCGTGTATTTTTATCAT+TGG + chr3_1:42918376-42918395 Msa0358170:intron 30.0%
!! TCGTGTATTTTTATCATTGG+AGG + chr3_1:42918379-42918398 Msa0358170:intron 30.0%
! GATGGCGTGTAATTTTATTA+AGG + chr3_1:42918430-42918449 Msa0358170:intron 30.0%
TGTGATTGTGAATTCATACA+AGG + chr3_1:42918467-42918486 Msa0358170:intron 30.0%
! TATTTTTCTTTGCTAACCAG+CGG - chr3_1:42918538-42918557 None:intergenic 30.0%
ATAAACAATCAGACGTAAAC+TGG + chr3_1:42918592-42918611 Msa0358170:intron 30.0%
AATGTAAGTTCAGTGTGTAT+AGG - chr3_1:42918672-42918691 None:intergenic 30.0%
! CAGAGAATAATTGGTTTCAA+GGG - chr3_1:42918892-42918911 None:intergenic 30.0%
AAACTCATGCAGAGAATAAT+TGG - chr3_1:42918901-42918920 None:intergenic 30.0%
! CATAAATCTGAGATAACCTT+TGG + chr3_1:42919177-42919196 Msa0358170:intron 30.0%
AAAAATCAACGCATCATAAC+AGG - chr3_1:42919396-42919415 None:intergenic 30.0%
TCTGTATCGTTATGACTATT+GGG + chr3_1:42919530-42919549 Msa0358170:CDS 30.0%
TACCCATAACAAATCAATTG+TGG + chr3_1:42919599-42919618 Msa0358170:CDS 30.0%
ACCCATAACAAATCAATTGT+GGG + chr3_1:42919600-42919619 Msa0358170:CDS 30.0%
ATTAACATGAATTTGATCCG+AGG - chr3_1:42919793-42919812 None:intergenic 30.0%
TCGGATCAAATTCATGTTAA+TGG + chr3_1:42919792-42919811 Msa0358170:CDS 30.0%
CGGATCAAATTCATGTTAAT+GGG + chr3_1:42919793-42919812 Msa0358170:CDS 30.0%
TGAGTAAAATGTGTACAGTT+AGG + chr3_1:42919877-42919896 Msa0358170:three_prime_UTR 30.0%
!!! TAGTTTTGTGAAGTGAAGTG+AGG + chr3_1:42908853-42908872 Msa0358170:five_prime_UTR 35.0%
! GGTTTAAGGTTTAAGGGTTT+AGG - chr3_1:42908922-42908941 None:intergenic 35.0%
!!! CTTTTAGAATGTTGAACCCT+AGG + chr3_1:42909226-42909245 Msa0358170:CDS 35.0%
TCTTCTTCTTCCTATACCTA+GGG - chr3_1:42909245-42909264 None:intergenic 35.0%
ATCTTCTTCTTCCTATACCT+AGG - chr3_1:42909246-42909265 None:intergenic 35.0%
GTATAGGAAGAAGAAGATTG+AGG + chr3_1:42909248-42909267 Msa0358170:CDS 35.0%
GAAGAAGAAGATTGAGGAAA+TGG + chr3_1:42909254-42909273 Msa0358170:CDS 35.0%
TGAGATTAAGGAAGATGTTC+CGG + chr3_1:42909311-42909330 Msa0358170:CDS 35.0%
AGGTTGGAGGATATTGAAAA+TGG + chr3_1:42909474-42909493 Msa0358170:CDS 35.0%
! TGAAACTGATGATGTGTGTT+TGG + chr3_1:42909506-42909525 Msa0358170:CDS 35.0%
TGTGTGTTTGGATAGGTATA+AGG + chr3_1:42909518-42909537 Msa0358170:CDS 35.0%
GTGAGAGAGTAAAATTGTTC+TGG + chr3_1:42909829-42909848 Msa0358170:intron 35.0%
GAGAGAGTAAAATTGTTCTG+GGG + chr3_1:42909831-42909850 Msa0358170:intron 35.0%
!!! GGGCTAACTACTTTTTTGAA+TGG + chr3_1:42909851-42909870 Msa0358170:intron 35.0%
! AGTCTGTTTTCATATTCACC+TGG + chr3_1:42910033-42910052 Msa0358170:intron 35.0%
!! TTCTATCATTTTGTGCTGCT+TGG + chr3_1:42910107-42910126 Msa0358170:intron 35.0%
! AGAAACTGATTTCATATGGC+GGG + chr3_1:42910131-42910150 Msa0358170:intron 35.0%
! GTGATCTTTTCAGCTTCATT+AGG + chr3_1:42910183-42910202 Msa0358170:intron 35.0%
CAACATGATGCTTCCATTAA+AGG - chr3_1:42910309-42910328 None:intergenic 35.0%
TCAGTTATGATGTCCCTAAT+TGG + chr3_1:42910357-42910376 Msa0358170:intron 35.0%
TTTCATTGCAGATTTGTGTG+GGG + chr3_1:42910534-42910553 Msa0358170:intron 35.0%
ACAACTTTGCATCTCTATCA+AGG + chr3_1:42910563-42910582 Msa0358170:CDS 35.0%
CAACTTTGCATCTCTATCAA+GGG + chr3_1:42910564-42910583 Msa0358170:CDS 35.0%
AACTTTGCATCTCTATCAAG+GGG + chr3_1:42910565-42910584 Msa0358170:CDS 35.0%
ACACTTAAAAGATGGACAGA+GGG - chr3_1:42910634-42910653 None:intergenic 35.0%
AACACTTAAAAGATGGACAG+AGG - chr3_1:42910635-42910654 None:intergenic 35.0%
!!! TACTTGTTTTGTTTCTGCCA+TGG - chr3_1:42910873-42910892 None:intergenic 35.0%
! ACTGTCTCTTTTGTATCATG+TGG + chr3_1:42910983-42911002 Msa0358170:intron 35.0%
TCTTTCTTTGATCCTTGACT+AGG + chr3_1:42911049-42911068 Msa0358170:intron 35.0%
AAAACAATGTCTCCTAGTCA+AGG - chr3_1:42911064-42911083 None:intergenic 35.0%
TTTCTCTTTATATGCTGCCA+TGG + chr3_1:42911081-42911100 Msa0358170:intron 35.0%
TTCTCTTTATATGCTGCCAT+GGG + chr3_1:42911082-42911101 Msa0358170:intron 35.0%
ATTCGCCATCACATAAAAGT+GGG + chr3_1:42911319-42911338 Msa0358170:CDS 35.0%
!! TCATACCCACTTTTATGTGA+TGG - chr3_1:42911327-42911346 None:intergenic 35.0%
GACCGTCATTGTTGAAATTA+CGG + chr3_1:42911345-42911364 Msa0358170:CDS 35.0%
CACCGTAATTTCAACAATGA+CGG - chr3_1:42911350-42911369 None:intergenic 35.0%
TGAGCAATGAACTGGAAAAA+TGG - chr3_1:42911694-42911713 None:intergenic 35.0%
! AGCCTTATCCATCAATATGT+TGG + chr3_1:42911770-42911789 Msa0358170:intron 35.0%
! GACCAACATATTGATGGATA+AGG - chr3_1:42911775-42911794 None:intergenic 35.0%
GCCTTTCTTAGTACCAAAAA+TGG - chr3_1:42911857-42911876 None:intergenic 35.0%
!! TTTTTGGTACTAAGAAAGGC+AGG + chr3_1:42911857-42911876 Msa0358170:intron 35.0%
! TTTTGGTACTAAGAAAGGCA+GGG + chr3_1:42911858-42911877 Msa0358170:intron 35.0%
CGTAAATTTAAGAAGTGAGG+GGG - chr3_1:42911919-42911938 None:intergenic 35.0%
ATAATGAACCCCCTCAAATT+TGG + chr3_1:42911960-42911979 Msa0358170:intron 35.0%
ACTAGCAACTACAAAGTGAA+AGG - chr3_1:42912010-42912029 None:intergenic 35.0%
AACTAGTTGTAGTCTGTCAT+TGG - chr3_1:42912074-42912093 None:intergenic 35.0%
AGTATGTAACTTCAACTCAC+TGG - chr3_1:42912229-42912248 None:intergenic 35.0%
!!! CTTGACTTGTATTGGTTTTG+AGG + chr3_1:42912247-42912266 Msa0358170:intron 35.0%
TCACCATTTAACCATGTCAT+TGG + chr3_1:42912683-42912702 Msa0358170:intron 35.0%
CAACCAATGACATGGTTAAA+TGG - chr3_1:42912689-42912708 None:intergenic 35.0%
!! TATGAAGCGCTGTTTATAGA+AGG - chr3_1:42913019-42913038 None:intergenic 35.0%
TACTAATCCAGATGAATTGC+GGG + chr3_1:42913156-42913175 Msa0358170:CDS 35.0%
CAAAAAGATTGAGGTGGTTT+AGG - chr3_1:42913194-42913213 None:intergenic 35.0%
AATCTGCAAAAAGATTGAGG+TGG - chr3_1:42913200-42913219 None:intergenic 35.0%
TTGATGTCTATTGTTCCTTG+TGG - chr3_1:42913525-42913544 None:intergenic 35.0%
GGTGTAAATAGGATCTTGAA+TGG - chr3_1:42913674-42913693 None:intergenic 35.0%
! ATTTGGCTTCACATTTATGC+AGG - chr3_1:42913695-42913714 None:intergenic 35.0%
TTGGATCTTGCACAAACAAT+GGG + chr3_1:42913773-42913792 Msa0358170:intron 35.0%
CATTATGGTAACAATGTTCC+TGG + chr3_1:42914023-42914042 Msa0358170:intron 35.0%
ACACAACCCTTTATCTTCTA+TGG - chr3_1:42914059-42914078 None:intergenic 35.0%
! GTAATGGAATTATCAGAGTG+GGG - chr3_1:42914095-42914114 None:intergenic 35.0%
GAGTCAAAATCAACAAAGGA+CGG - chr3_1:42914175-42914194 None:intergenic 35.0%
TGGACAAAGCTAGTAAAAAG+CGG - chr3_1:42914245-42914264 None:intergenic 35.0%
TATCTATTGAACATAGGTGG+TGG - chr3_1:42914390-42914409 None:intergenic 35.0%
TTCAACATTCACCGAACAAA+GGG - chr3_1:42914420-42914439 None:intergenic 35.0%
TTTCAACATTCACCGAACAA+AGG - chr3_1:42914421-42914440 None:intergenic 35.0%
! AAGTTCTTGGTTAGTCCTAT+TGG + chr3_1:42914709-42914728 Msa0358170:intron 35.0%
TTTCTCGTAGAACTTTGTCT+TGG + chr3_1:42914800-42914819 Msa0358170:intron 35.0%
GAAACTTAATGATATGCGAC+GGG + chr3_1:42914996-42915015 Msa0358170:intron 35.0%
GGAAAGTAACACAATGAAAG+AGG - chr3_1:42915030-42915049 None:intergenic 35.0%
CCTAAATAATCCCAGTAACA+GGG - chr3_1:42915091-42915110 None:intergenic 35.0%
CCTGTTACTGGGATTATTTA+GGG + chr3_1:42915089-42915108 Msa0358170:intron 35.0%
TTCTTTGGTACATCTGAACA+GGG - chr3_1:42915115-42915134 None:intergenic 35.0%
TTTCTTTGGTACATCTGAAC+AGG - chr3_1:42915116-42915135 None:intergenic 35.0%
AGATGTACCAAAGAAAGTAG+AGG + chr3_1:42915120-42915139 Msa0358170:intron 35.0%
GATGTACCAAAGAAAGTAGA+GGG + chr3_1:42915121-42915140 Msa0358170:intron 35.0%
ATGTACCAAAGAAAGTAGAG+GGG + chr3_1:42915122-42915141 Msa0358170:intron 35.0%
TAAGAGGGGTAGTAATGATA+AGG + chr3_1:42915165-42915184 Msa0358170:intron 35.0%
AAGAGGGGTAGTAATGATAA+GGG + chr3_1:42915166-42915185 Msa0358170:intron 35.0%
TAGAAAGGAACCTAACAGAA+TGG + chr3_1:42915220-42915239 Msa0358170:intron 35.0%
AGAAAGGAACCTAACAGAAT+GGG + chr3_1:42915221-42915240 Msa0358170:intron 35.0%
GTGTTAAGTCATAGAAAGTC+AGG + chr3_1:42915712-42915731 Msa0358170:intron 35.0%
AATCTTGTACGACTTAGGAA+CGG + chr3_1:42915746-42915765 Msa0358170:intron 35.0%
! AGGTCCTTATTACCCTTTTA+AGG + chr3_1:42915983-42916002 Msa0358170:intron 35.0%
TGCTTGGAATTGAAAACTAC+AGG - chr3_1:42916179-42916198 None:intergenic 35.0%
! GTTTTCAATTCCAAGCATAG+CGG + chr3_1:42916182-42916201 Msa0358170:intron 35.0%
! TTTTCAATTCCAAGCATAGC+GGG + chr3_1:42916183-42916202 Msa0358170:intron 35.0%
GTATCCGATCTATAAGAACA+AGG + chr3_1:42916768-42916787 Msa0358170:intron 35.0%
ATCCGATCTATAAGAACAAG+GGG + chr3_1:42916770-42916789 Msa0358170:intron 35.0%
TGAGTCATACCATGAAGTTA+TGG + chr3_1:42916833-42916852 Msa0358170:intron 35.0%
GAGTCATACCATGAAGTTAT+GGG + chr3_1:42916834-42916853 Msa0358170:intron 35.0%
ATACCATGAAGTTATGGGAA+AGG + chr3_1:42916839-42916858 Msa0358170:intron 35.0%
TACCATGAAGTTATGGGAAA+GGG + chr3_1:42916840-42916859 Msa0358170:intron 35.0%
AAGAAAAGAGACTCACGTTA+CGG + chr3_1:42916879-42916898 Msa0358170:intron 35.0%
!!! AACCAATTTGGTTTTATGCC+TGG + chr3_1:42916904-42916923 Msa0358170:intron 35.0%
!!! ACCAATTTGGTTTTATGCCT+GGG + chr3_1:42916905-42916924 Msa0358170:intron 35.0%
CTTTCCACAAAATCTCTCTA+GGG - chr3_1:42917044-42917063 None:intergenic 35.0%
!! ATCCTGGATAGCTCTAATAT+AGG - chr3_1:42917094-42917113 None:intergenic 35.0%
TGGTGCAGTCCTATTATTAT+GGG - chr3_1:42917174-42917193 None:intergenic 35.0%
TTGGTGCAGTCCTATTATTA+TGG - chr3_1:42917175-42917194 None:intergenic 35.0%
ATAATAATAGGACTGCACCA+AGG + chr3_1:42917174-42917193 Msa0358170:intron 35.0%
TAATAATAGGACTGCACCAA+GGG + chr3_1:42917175-42917194 Msa0358170:intron 35.0%
! TCTGCAAAAAGCATACATCT+TGG - chr3_1:42917270-42917289 None:intergenic 35.0%
TGGAATGTAACTTCAGCAAA+AGG + chr3_1:42917403-42917422 Msa0358170:intron 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG - chr3_1:42917505-42917524 None:intergenic 35.0%
! AAAGTACCACTTAAGCTGAA+AGG + chr3_1:42917603-42917622 Msa0358170:intron 35.0%
AACTTTCCTTTCAGCTTAAG+TGG - chr3_1:42917612-42917631 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG + chr3_1:42917616-42917635 Msa0358170:intron 35.0%
ATGGTAAGACTAGACAGTAT+AGG + chr3_1:42917744-42917763 Msa0358170:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG + chr3_1:42917802-42917821 Msa0358170:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + chr3_1:42917822-42917841 Msa0358170:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG + chr3_1:42917827-42917846 Msa0358170:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG + chr3_1:42917883-42917902 Msa0358170:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG + chr3_1:42917967-42917986 Msa0358170:intron 35.0%
TGATAAACAAAGACCCGAAT+TGG + chr3_1:42918196-42918215 Msa0358170:intron 35.0%
GATAAACAAAGACCCGAATT+GGG + chr3_1:42918197-42918216 Msa0358170:intron 35.0%
GCCAAATCAGTTACAAGTAT+AGG + chr3_1:42918219-42918238 Msa0358170:intron 35.0%
CCCTATACTTGTAACTGATT+TGG - chr3_1:42918223-42918242 None:intergenic 35.0%
CATCAGTATATCAATGTGGA+TGG - chr3_1:42918268-42918287 None:intergenic 35.0%
CATCCACATTGATATACTGA+TGG + chr3_1:42918266-42918285 Msa0358170:intron 35.0%
CATACAAGGATTGAGTTCAA+AGG + chr3_1:42918481-42918500 Msa0358170:intron 35.0%
TAAGTTCAGTGTGTATAGGT+TGG - chr3_1:42918668-42918687 None:intergenic 35.0%
ACACTGAACTTACATTCACT+TGG + chr3_1:42918676-42918695 Msa0358170:intron 35.0%
GAAAACAAGTGTTAAAGAGC+TGG + chr3_1:42918736-42918755 Msa0358170:intron 35.0%
! TTCCTTTAAAAGGCATGAAG+CGG - chr3_1:42918868-42918887 None:intergenic 35.0%
TTTCAAGGGCTTCCTTTAAA+AGG - chr3_1:42918878-42918897 None:intergenic 35.0%
! GCAGAGAATAATTGGTTTCA+AGG - chr3_1:42918893-42918912 None:intergenic 35.0%
!! CTCAACCTTTTGTCTTGTTA+TGG + chr3_1:42919060-42919079 Msa0358170:intron 35.0%
TACAGCTCCATAAGAAACTA+TGG + chr3_1:42919203-42919222 Msa0358170:intron 35.0%
CTTCCTTCCATAGTTTCTTA+TGG - chr3_1:42919213-42919232 None:intergenic 35.0%
ATTGAAGCGCAATATTGAGA+TGG + chr3_1:42919267-42919286 Msa0358170:CDS 35.0%
CAATAGTCATAACGATACAG+AGG - chr3_1:42919531-42919550 None:intergenic 35.0%
CTCTGTATCGTTATGACTAT+TGG + chr3_1:42919529-42919548 Msa0358170:CDS 35.0%
CTGTATCGTTATGACTATTG+GGG + chr3_1:42919531-42919550 Msa0358170:CDS 35.0%
TGTATCGTTATGACTATTGG+GGG + chr3_1:42919532-42919551 Msa0358170:CDS 35.0%
! CTGCTCTTTTCTGAATTCTT+GGG - chr3_1:42919561-42919580 None:intergenic 35.0%
!! GCCCACAATTGATTTGTTAT+GGG - chr3_1:42919604-42919623 None:intergenic 35.0%
!! TGCCCACAATTGATTTGTTA+TGG - chr3_1:42919605-42919624 None:intergenic 35.0%
TAACAAATCAATTGTGGGCA+AGG + chr3_1:42919605-42919624 Msa0358170:CDS 35.0%
AACAAATCAATTGTGGGCAA+GGG + chr3_1:42919606-42919625 Msa0358170:CDS 35.0%
! TGTTTTACGCTATCTTCGTA+CGG - chr3_1:42919651-42919670 None:intergenic 35.0%
ACTTCTAGATTGTCAGATGA+AGG + chr3_1:42919822-42919841 Msa0358170:CDS 35.0%
TTTGCAGTGTAGAAACACTA+TGG + chr3_1:42919919-42919938 Msa0358170:three_prime_UTR 35.0%
! CTAGGCATGTATATCGTTTT+AGG - chr3_1:42920018-42920037 None:intergenic 35.0%
! GGAGAGGGTTTAAGGTTTAA+GGG - chr3_1:42908928-42908947 None:intergenic 40.0%
TGCTTCGTCTTCAGATTCTT+TGG - chr3_1:42909076-42909095 None:intergenic 40.0%
! CTAAAAGCTTCAATCGACTC+CGG - chr3_1:42909213-42909232 None:intergenic 40.0%
GAATGTTGAACCCTAGGTAT+AGG + chr3_1:42909232-42909251 Msa0358170:CDS 40.0%
! CATTTAGTCTTCAACTCCTC+CGG - chr3_1:42909333-42909352 None:intergenic 40.0%
GGAGGAGTTGAAGACTAAAT+GGG + chr3_1:42909332-42909351 Msa0358170:CDS 40.0%
TATTCGTGAAGCGCATAAGA+TGG + chr3_1:42909437-42909456 Msa0358170:CDS 40.0%
! CTGATGATGTGTGTTTGGAT+AGG + chr3_1:42909511-42909530 Msa0358170:CDS 40.0%
GAAACAGTATAATGAGTGGG+TGG + chr3_1:42909548-42909567 Msa0358170:CDS 40.0%
TTAGACCAAGATTATCACCC+TGG + chr3_1:42909716-42909735 Msa0358170:CDS 40.0%
TAGACCAAGATTATCACCCT+GGG + chr3_1:42909717-42909736 Msa0358170:CDS 40.0%
GAAAAGAGGCAAGGATTACA+AGG + chr3_1:42909745-42909764 Msa0358170:CDS 40.0%
GAGCTACCATTCTATTATCC+TGG + chr3_1:42909886-42909905 Msa0358170:CDS 40.0%
ACTTGGCCAGGATAATAGAA+TGG - chr3_1:42909895-42909914 None:intergenic 40.0%
AGCAGTAATTCGAAACAACC+AGG - chr3_1:42910054-42910073 None:intergenic 40.0%
ACATTGGTGGAGTATACGAT+GGG + chr3_1:42910597-42910616 Msa0358170:CDS 40.0%
TAAAAGATGGACAGAGGGAT+TGG - chr3_1:42910629-42910648 None:intergenic 40.0%
!!! TTCCTCATTGTTTTGGATGC+TGG + chr3_1:42910685-42910704 Msa0358170:intron 40.0%
! GTAATGAAGCATTTCAGTGC+TGG - chr3_1:42910842-42910861 None:intergenic 40.0%
CTTCATTACATCCAAAGCCA+TGG + chr3_1:42910853-42910872 Msa0358170:intron 40.0%
!!! TTTTGTTTCTGCCATGGCTT+TGG - chr3_1:42910867-42910886 None:intergenic 40.0%
AGACTTTGGATGCATAGTAC+TGG + chr3_1:42910928-42910947 Msa0358170:intron 40.0%
TGTTTACAGACTAGAGCTAC+AGG + chr3_1:42910952-42910971 Msa0358170:intron 40.0%
GTTTACAGACTAGAGCTACA+GGG + chr3_1:42910953-42910972 Msa0358170:intron 40.0%
!! ATAACAGTATGAAGTGCTGC+TGG - chr3_1:42911145-42911164 None:intergenic 40.0%
CATCTACTGTAACGTGTTCT+AGG + chr3_1:42911263-42911282 Msa0358170:intron 40.0%
! TACTGTAACGTGTTCTAGGT+GGG + chr3_1:42911267-42911286 Msa0358170:intron 40.0%
GATTCGCCATCACATAAAAG+TGG + chr3_1:42911318-42911337 Msa0358170:CDS 40.0%
AATTTGGCAGGTAACAGTAC+GGG - chr3_1:42911461-42911480 None:intergenic 40.0%
CAATTTGGCAGGTAACAGTA+CGG - chr3_1:42911462-42911481 None:intergenic 40.0%
CTCATCGATAGGAAACTAGT+TGG + chr3_1:42911495-42911514 Msa0358170:intron 40.0%
AAAAATGGACACCTGATGTG+GGG - chr3_1:42911679-42911698 None:intergenic 40.0%
GAAAAATGGACACCTGATGT+GGG - chr3_1:42911680-42911699 None:intergenic 40.0%
TTGAGATTGGGTCTTCAGTT+GGG - chr3_1:42911751-42911770 None:intergenic 40.0%
GATGGATAAGGCTTGAGATT+GGG - chr3_1:42911763-42911782 None:intergenic 40.0%
! TGATGGATAAGGCTTGAGAT+TGG - chr3_1:42911764-42911783 None:intergenic 40.0%
CACTCAGACCAACATATTGA+TGG - chr3_1:42911781-42911800 None:intergenic 40.0%
TTTGGTACTAAGAAAGGCAG+GGG + chr3_1:42911859-42911878 Msa0358170:intron 40.0%
TGCAATGTCCAAATTTGAGG+GGG - chr3_1:42911971-42911990 None:intergenic 40.0%
GTGCAATGTCCAAATTTGAG+GGG - chr3_1:42911972-42911991 None:intergenic 40.0%
GGTGCAATGTCCAAATTTGA+GGG - chr3_1:42911973-42911992 None:intergenic 40.0%
TGGTGCAATGTCCAAATTTG+AGG - chr3_1:42911974-42911993 None:intergenic 40.0%
CAACTACAAAGTGAAAGGAG+AGG - chr3_1:42912005-42912024 None:intergenic 40.0%
GAACCAGGTTAGGTTATGTA+GGG + chr3_1:42912184-42912203 Msa0358170:intron 40.0%
TTTCCCTACATAACCTAACC+TGG - chr3_1:42912190-42912209 None:intergenic 40.0%
TAACTTCAACTCACTGGCAA+TGG - chr3_1:42912223-42912242 None:intergenic 40.0%
CAATCTTCATGCATTAGCGA+GGG - chr3_1:42912484-42912503 None:intergenic 40.0%
ACAATCTTCATGCATTAGCG+AGG - chr3_1:42912485-42912504 None:intergenic 40.0%
! TATCCTTGTTTGGCCATAAG+TGG + chr3_1:42912834-42912853 Msa0358170:intron 40.0%
AAACCACTTATGGCCAAACA+AGG - chr3_1:42912840-42912859 None:intergenic 40.0%
TCCACAAAACGAAGTTCGAT+CGG - chr3_1:42912948-42912967 None:intergenic 40.0%
TCTTCGTCACGGTGAAATAT+TGG - chr3_1:42913136-42913155 None:intergenic 40.0%
!! CTGGATTAGTATCTTCGTCA+CGG - chr3_1:42913147-42913166 None:intergenic 40.0%
TCAAGACATATCTGACAGCA+TGG - chr3_1:42913331-42913350 None:intergenic 40.0%
TAAAATTTGCAGCGTGACTG+TGG + chr3_1:42913399-42913418 Msa0358170:intron 40.0%
!! GGATCTTTTCTAGGAATAGG+AGG - chr3_1:42913429-42913448 None:intergenic 40.0%
!! CCTGGATCTTTTCTAGGAAT+AGG - chr3_1:42913432-42913451 None:intergenic 40.0%
CCTATTCCTAGAAAAGATCC+AGG + chr3_1:42913429-42913448 Msa0358170:CDS 40.0%
! TTGTCTCCTGGATCTTTTCT+AGG - chr3_1:42913438-42913457 None:intergenic 40.0%
GAAAATAGAGGTTCTTCCTC+TGG - chr3_1:42913462-42913481 None:intergenic 40.0%
TGTTCTTATGGACTTCCACA+AGG + chr3_1:42913507-42913526 Msa0358170:intron 40.0%
GGAACAATAGACATCAATGC+TGG + chr3_1:42913528-42913547 Msa0358170:intron 40.0%
!! TAGACATCAATGCTGGTTCT+AGG + chr3_1:42913535-42913554 Msa0358170:intron 40.0%
!! TCAATGCTGGTTCTAGGTTA+TGG + chr3_1:42913541-42913560 Msa0358170:intron 40.0%
TCTCTTATACAAGCAGACAG+TGG + chr3_1:42913570-42913589 Msa0358170:intron 40.0%
CTATACACACACAAGGGATT+TGG - chr3_1:42913598-42913617 None:intergenic 40.0%
CAAATCCCTTGTGTGTGTAT+AGG + chr3_1:42913596-42913615 Msa0358170:intron 40.0%
AACAGCCTATACACACACAA+GGG - chr3_1:42913604-42913623 None:intergenic 40.0%
AAACAGCCTATACACACACA+AGG - chr3_1:42913605-42913624 None:intergenic 40.0%
! TGTCTGTGTTGATGTTCAGT+TGG + chr3_1:42913754-42913773 Msa0358170:intron 40.0%
GTTGGATCTTGCACAAACAA+TGG + chr3_1:42913772-42913791 Msa0358170:intron 40.0%
AACCCTTTATCTTCTATGGC+CGG - chr3_1:42914055-42914074 None:intergenic 40.0%
!! CAGATGCTGAATTAGCTTTG+TGG + chr3_1:42914141-42914160 Msa0358170:intron 40.0%
GATATTGAGAGCCCTTTGTT+CGG + chr3_1:42914406-42914425 Msa0358170:intron 40.0%
GTAGTTATAGGATGCCAAAG+TGG - chr3_1:42914657-42914676 None:intergenic 40.0%
GGTTGTCTTTCACAAGTTCT+TGG + chr3_1:42914696-42914715 Msa0358170:intron 40.0%
AACTTTGTCTTGGAGATGCA+AGG + chr3_1:42914810-42914829 Msa0358170:intron 40.0%
ACTTTGTCTTGGAGATGCAA+GGG + chr3_1:42914811-42914830 Msa0358170:intron 40.0%
GTAAACTGGAACACAGCAAA+AGG - chr3_1:42914930-42914949 None:intergenic 40.0%
! TTTGCTGTGTTCCAGTTTAC+TGG + chr3_1:42914930-42914949 Msa0358170:intron 40.0%
TCGTCATGAAACCAGTAAAC+TGG - chr3_1:42914944-42914963 None:intergenic 40.0%
!! ACGAATGAAATTTGGTGTGC+TGG + chr3_1:42914960-42914979 Msa0358170:intron 40.0%
CCCTGTTACTGGGATTATTT+AGG + chr3_1:42915088-42915107 Msa0358170:intron 40.0%
CCCTAAATAATCCCAGTAAC+AGG - chr3_1:42915092-42915111 None:intergenic 40.0%
CATGATCACACAATTGAGGT+GGG + chr3_1:42915189-42915208 Msa0358170:intron 40.0%
ATGATCACACAATTGAGGTG+GGG + chr3_1:42915190-42915209 Msa0358170:intron 40.0%
GAAAGGAACCTAACAGAATG+GGG + chr3_1:42915222-42915241 Msa0358170:intron 40.0%
ATGCACCCTTCATGATTGAT+TGG - chr3_1:42915257-42915276 None:intergenic 40.0%
! ATGAAGGGTGCATAGATATG+AGG + chr3_1:42915264-42915283 Msa0358170:intron 40.0%
! TGAAGGGTGCATAGATATGA+GGG + chr3_1:42915265-42915284 Msa0358170:intron 40.0%
ACGGAATCTGTTGGAATTCT+AGG + chr3_1:42915308-42915327 Msa0358170:intron 40.0%
! GTTGGAATTCTAGGAAGCTT+AGG + chr3_1:42915317-42915336 Msa0358170:intron 40.0%
AGGCAAAAAGCTATCAGACT+TGG + chr3_1:42915547-42915566 Msa0358170:CDS 40.0%
TATAGCAGCCATCTGCTATT+TGG - chr3_1:42916212-42916231 None:intergenic 40.0%
TTGGTCATGGAAGGTAACTT+GGG + chr3_1:42916385-42916404 Msa0358170:intron 40.0%
TCCGATCTATAAGAACAAGG+GGG + chr3_1:42916771-42916790 Msa0358170:intron 40.0%
TCCCCCTTGTTCTTATAGAT+CGG - chr3_1:42916775-42916794 None:intergenic 40.0%
TACAACAGTGCGCGAATTAT+AGG + chr3_1:42916797-42916816 Msa0358170:intron 40.0%
TACCCTTTCCCATAACTTCA+TGG - chr3_1:42916845-42916864 None:intergenic 40.0%
CACGTTACGGATAACCAATT+TGG + chr3_1:42916892-42916911 Msa0358170:intron 40.0%
TCCCAGGCATAAAACCAAAT+TGG - chr3_1:42916909-42916928 None:intergenic 40.0%
!!! AATTTGGTTTTATGCCTGGG+AGG + chr3_1:42916908-42916927 Msa0358170:intron 40.0%
GCTTTCCACAAAATCTCTCT+AGG - chr3_1:42917045-42917064 None:intergenic 40.0%
TGCCTATATTAGAGCTATCC+AGG + chr3_1:42917089-42917108 Msa0358170:intron 40.0%
AGCTATCCAGGATATGTATG+AGG + chr3_1:42917101-42917120 Msa0358170:intron 40.0%
AAGCTTCCTCATACATATCC+TGG - chr3_1:42917110-42917129 None:intergenic 40.0%
!! TACATCTTGGTGCTAACTCT+TGG - chr3_1:42917257-42917276 None:intergenic 40.0%
TAGAAGCAAGACGGAGTATA+TGG + chr3_1:42917383-42917402 Msa0358170:intron 40.0%
AACTTCAGCAAAAGGAGAAG+TGG + chr3_1:42917411-42917430 Msa0358170:intron 40.0%
ACTTCAGCAAAAGGAGAAGT+GGG + chr3_1:42917412-42917431 Msa0358170:intron 40.0%
GGGTCCATAGTACAAAATGA+CGG + chr3_1:42917498-42917517 Msa0358170:intron 40.0%
ATCATCGTATTTAAGCTGGG+TGG + chr3_1:42917541-42917560 Msa0358170:intron 40.0%
TTTAAGCTGGGTGGTTGAAA+TGG + chr3_1:42917550-42917569 Msa0358170:intron 40.0%
CACTTACTTTACTCTCGTGT+TGG - chr3_1:42917694-42917713 None:intergenic 40.0%
CGAGAGTAAAGTAAGTGTAG+CGG + chr3_1:42917697-42917716 Msa0358170:intron 40.0%
AGACTAGACAGTATAGGACT+AGG + chr3_1:42917750-42917769 Msa0358170:intron 40.0%
TCTTCTTACAACGGCATCTA+CGG - chr3_1:42917870-42917889 None:intergenic 40.0%
!! TAACTGATTTGGCCCAATTC+GGG - chr3_1:42918212-42918231 None:intergenic 40.0%
!! GTAACTGATTTGGCCCAATT+CGG - chr3_1:42918213-42918232 None:intergenic 40.0%
AAGTATAGGGCCCAAGAAAT+GGG + chr3_1:42918233-42918252 Msa0358170:intron 40.0%
AGGCCATCAGTATATCAATG+TGG - chr3_1:42918272-42918291 None:intergenic 40.0%
ATGCAGTCTTAAGGGGAAAA+AGG - chr3_1:42918292-42918311 None:intergenic 40.0%
TTTCTGCATGCAGTCTTAAG+GGG - chr3_1:42918299-42918318 None:intergenic 40.0%
GTTTCTGCATGCAGTCTTAA+GGG - chr3_1:42918300-42918319 None:intergenic 40.0%
! TGTTTCTGCATGCAGTCTTA+AGG - chr3_1:42918301-42918320 None:intergenic 40.0%
CAACAATCTCTACCACAGTA+AGG - chr3_1:42918337-42918356 None:intergenic 40.0%
TACTGTGGTAGAGATTGTTG+AGG + chr3_1:42918337-42918356 Msa0358170:intron 40.0%
ATTGAGTTCAAAGGCAGAGT+AGG + chr3_1:42918490-42918509 Msa0358170:intron 40.0%
AATATTAACCTATCTGCCGC+TGG + chr3_1:42918519-42918538 Msa0358170:intron 40.0%
!! TCAGTGTGTATAGGTTGGTT+GGG - chr3_1:42918663-42918682 None:intergenic 40.0%
!! TTCAGTGTGTATAGGTTGGT+TGG - chr3_1:42918664-42918683 None:intergenic 40.0%
TGTTAAAGAGCTGGACTTAG+AGG + chr3_1:42918745-42918764 Msa0358170:CDS 40.0%
!! ATATTACACCACTGGCTCTA+GGG + chr3_1:42918841-42918860 Msa0358170:intron 40.0%
!! AGAAACGACAAAAGCACTAG+CGG - chr3_1:42918958-42918977 None:intergenic 40.0%
AGTCTTAACAGCAGATTGAC+TGG - chr3_1:42919118-42919137 None:intergenic 40.0%
TTATGGAGCTGTATCACCAA+AGG - chr3_1:42919196-42919215 None:intergenic 40.0%
GCTCCATAAGAAACTATGGA+AGG + chr3_1:42919207-42919226 Msa0358170:intron 40.0%
GAAACTATGGAAGGAAGCAA+AGG + chr3_1:42919216-42919235 Msa0358170:CDS 40.0%
ACGCATCATAACAGGAAATG+AGG - chr3_1:42919388-42919407 None:intergenic 40.0%
! GAGTTTTACGACTGCGAAAA+GGG - chr3_1:42919431-42919450 None:intergenic 40.0%
! AGAGTTTTACGACTGCGAAA+AGG - chr3_1:42919432-42919451 None:intergenic 40.0%
TTTCGCAGTCGTAAAACTCT+TGG + chr3_1:42919432-42919451 Msa0358170:intron 40.0%
TAAAACTCTTGGTCTGCCAT+TGG + chr3_1:42919443-42919462 Msa0358170:CDS 40.0%
TAACGATACAGAGGACTTTC+AGG - chr3_1:42919522-42919541 None:intergenic 40.0%
GTATCGTTATGACTATTGGG+GGG + chr3_1:42919533-42919552 Msa0358170:CDS 40.0%
! CCTGCTCTTTTCTGAATTCT+TGG - chr3_1:42919562-42919581 None:intergenic 40.0%
CCAAGAATTCAGAAAAGAGC+AGG + chr3_1:42919559-42919578 Msa0358170:CDS 40.0%
GTTGACGAGTATTCAAAGCA+AGG + chr3_1:42919684-42919703 Msa0358170:CDS 40.0%
! GGGAGAGGGTTTAAGGTTTA+AGG - chr3_1:42908929-42908948 None:intergenic 45.0%
GGAATAAGGGAGAGGGTTTA+AGG - chr3_1:42908936-42908955 None:intergenic 45.0%
GAAACCTTCCTCCAAACCTT+CGG + chr3_1:42909042-42909061 Msa0358170:CDS 45.0%
!!! TTCTTTGGTTTTAGGGCCGA+AGG - chr3_1:42909061-42909080 None:intergenic 45.0%
GATTGAGGAAATGGGAGTGA+CGG + chr3_1:42909263-42909282 Msa0358170:CDS 45.0%
!! AGTGACGGAAGAGGAGTATT+TGG + chr3_1:42909278-42909297 Msa0358170:CDS 45.0%
! GGCGAAGCAGTTTGAGATTA+AGG + chr3_1:42909299-42909318 Msa0358170:CDS 45.0%
GATTAAGGAAGATGTTCCGG+AGG + chr3_1:42909314-42909333 Msa0358170:CDS 45.0%
CGGAGGAGTTGAAGACTAAA+TGG + chr3_1:42909331-42909350 Msa0358170:CDS 45.0%
GAGTTGAAGACTAAATGGGC+AGG + chr3_1:42909336-42909355 Msa0358170:CDS 45.0%
TGAGTGGGTGGAAGCTAATA+AGG + chr3_1:42909560-42909579 Msa0358170:CDS 45.0%
AGAGGCAAGGATTACAAGGA+TGG + chr3_1:42909749-42909768 Msa0358170:CDS 45.0%
CAAGGATTACAAGGATGGCA+TGG + chr3_1:42909754-42909773 Msa0358170:CDS 45.0%
GATTACAAGGATGGCATGGT+AGG + chr3_1:42909758-42909777 Msa0358170:intron 45.0%
GTGAAATAGCTTACTTGGCC+AGG - chr3_1:42909907-42909926 None:intergenic 45.0%
CGCGCTCTTAAGATTTCCTA+TGG + chr3_1:42910006-42910025 Msa0358170:intron 45.0%
! TGATTTCATATGGCGGGACT+AGG + chr3_1:42910137-42910156 Msa0358170:intron 45.0%
!! GGACTAGGCTAGTCTTCATT+AGG + chr3_1:42910152-42910171 Msa0358170:intron 45.0%
ATTGCAGATTTGTGTGGGGA+AGG + chr3_1:42910538-42910557 Msa0358170:intron 45.0%
!! CAAGGGGCATTTGTTGACAT+TGG + chr3_1:42910581-42910600 Msa0358170:CDS 45.0%
GACATTGGTGGAGTATACGA+TGG + chr3_1:42910596-42910615 Msa0358170:CDS 45.0%
CTCCAGCATCCAAAACAATG+AGG - chr3_1:42910690-42910709 None:intergenic 45.0%
AGTCTCAGGTGTGTTTCTCT+AGG - chr3_1:42910896-42910915 None:intergenic 45.0%
! CTACTGTAACGTGTTCTAGG+TGG + chr3_1:42911266-42911285 Msa0358170:intron 45.0%
! CAGGTAACAGTACGGGTTAA+AGG - chr3_1:42911454-42911473 None:intergenic 45.0%
TCTCTCTAGTGTGCAACAAC+TGG + chr3_1:42911601-42911620 Msa0358170:intron 45.0%
CTCTCTAGTGTGCAACAACT+GGG + chr3_1:42911602-42911621 Msa0358170:intron 45.0%
TCTCTAGTGTGCAACAACTG+GGG + chr3_1:42911603-42911622 Msa0358170:intron 45.0%
GGGGATACCAACAGAAACTA+GGG - chr3_1:42911660-42911679 None:intergenic 45.0%
TGGGGATACCAACAGAAACT+AGG - chr3_1:42911661-42911680 None:intergenic 45.0%
GGAAAAATGGACACCTGATG+TGG - chr3_1:42911681-42911700 None:intergenic 45.0%
ATTGCTCACCCCATTCCAAA+GGG + chr3_1:42911706-42911725 Msa0358170:intron 45.0%
CTTGAGATTGGGTCTTCAGT+TGG - chr3_1:42911752-42911771 None:intergenic 45.0%
TTGGTCTGAGTGTCAAACCT+GGG + chr3_1:42911789-42911808 Msa0358170:intron 45.0%
GTAGTTGCTAGTTAGTACGC+TGG + chr3_1:42912018-42912037 Msa0358170:intron 45.0%
CGAACCAGGTTAGGTTATGT+AGG + chr3_1:42912183-42912202 Msa0358170:intron 45.0%
AAGGGTAGACCTTTCTTCAG+TGG - chr3_1:42912642-42912661 None:intergenic 45.0%
GTCACATGCAACCAATGACA+TGG - chr3_1:42912697-42912716 None:intergenic 45.0%
CAATGTAGGTAGGACACACA+AGG + chr3_1:42912772-42912791 Msa0358170:intron 45.0%
CCACAAAACGAAGTTCGATC+GGG - chr3_1:42912947-42912966 None:intergenic 45.0%
CGTCACGGTGAAATATTGGT+GGG - chr3_1:42913132-42913151 None:intergenic 45.0%
TCGTCACGGTGAAATATTGG+TGG - chr3_1:42913133-42913152 None:intergenic 45.0%
GATTGAGGTGGTTTAGGGAA+AGG - chr3_1:42913188-42913207 None:intergenic 45.0%
CATAACCACACGAAGGATGA+GGG - chr3_1:42913647-42913666 None:intergenic 45.0%
ACAGACAGACACAGGTTCAT+AGG - chr3_1:42913741-42913760 None:intergenic 45.0%
ACATCAACACAGACAGACAC+AGG - chr3_1:42913749-42913768 None:intergenic 45.0%
ACTCCGGCCATAGAAGATAA+AGG + chr3_1:42914049-42914068 Msa0358170:intron 45.0%
CTCCGGCCATAGAAGATAAA+GGG + chr3_1:42914050-42914069 Msa0358170:intron 45.0%
AATTATCAGAGTGGGGCAGT+CGG - chr3_1:42914088-42914107 None:intergenic 45.0%
!! AGGTATTGGTTAGGCCACTT+TGG + chr3_1:42914640-42914659 Msa0358170:intron 45.0%
CGCTTGTAACAGATGCCAAT+AGG - chr3_1:42914727-42914746 None:intergenic 45.0%
!! GGTGGGCTAATGTGAAATCA+GGG + chr3_1:42914832-42914851 Msa0358170:intron 45.0%
GACTGCTTGATCCCATAACA+GGG - chr3_1:42914861-42914880 None:intergenic 45.0%
TGACTGCTTGATCCCATAAC+AGG - chr3_1:42914862-42914881 None:intergenic 45.0%
GCAATCCCCTCTACTTTCTT+TGG - chr3_1:42915130-42915149 None:intergenic 45.0%
AGGGCATGATCACACAATTG+AGG + chr3_1:42915185-42915204 Msa0358170:intron 45.0%
GCATGATCACACAATTGAGG+TGG + chr3_1:42915188-42915207 Msa0358170:intron 45.0%
TGGCTGCCAATCAATCATGA+AGG + chr3_1:42915248-42915267 Msa0358170:intron 45.0%
GGCTGCCAATCAATCATGAA+GGG + chr3_1:42915249-42915268 Msa0358170:intron 45.0%
CATAGATATGAGGGAGGGAA+TGG + chr3_1:42915274-42915293 Msa0358170:intron 45.0%
TAGAATGCTTCACTTCCGTC+AGG - chr3_1:42915343-42915362 None:intergenic 45.0%
ATTTGGTATCCCGCTATGCT+TGG - chr3_1:42916195-42916214 None:intergenic 45.0%
CTTGGTCATGGAAGGTAACT+TGG + chr3_1:42916384-42916403 Msa0358170:intron 45.0%
AACATAGACTCTCTCCGCAA+AGG - chr3_1:42916505-42916524 None:intergenic 45.0%
CTACTTACTTTGACGCGTGA+TGG + chr3_1:42916948-42916967 Msa0358170:intron 45.0%
! GAGTCCCTAGAGAGATTTTG+TGG + chr3_1:42917037-42917056 Msa0358170:intron 45.0%
TGGAAAGCCCTAGAGAAGAA+AGG + chr3_1:42917057-42917076 Msa0358170:intron 45.0%
GGAAAGCCCTAGAGAAGAAA+GGG + chr3_1:42917058-42917077 Msa0358170:intron 45.0%
GAAAGCCCTAGAGAAGAAAG+GGG + chr3_1:42917059-42917078 Msa0358170:intron 45.0%
! GCAGATGATGTAGTCTTGCT+TGG + chr3_1:42917285-42917304 Msa0358170:intron 45.0%
AGTCGAGGGAGGAGTTAAAT+GGG + chr3_1:42917310-42917329 Msa0358170:intron 45.0%
GCGAAAACCATACGCTTCTA+AGG - chr3_1:42917358-42917377 None:intergenic 45.0%
TCTACCTTGGAGGTGAAAGT+TGG + chr3_1:42917435-42917454 Msa0358170:intron 45.0%
ATCTCCAACTTTCACCTCCA+AGG - chr3_1:42917442-42917461 None:intergenic 45.0%
TTGAAATGGAGAAGAGCCTC+AGG + chr3_1:42917564-42917583 Msa0358170:intron 45.0%
CTTATCGCACAAAACACCTG+AGG - chr3_1:42917583-42917602 None:intergenic 45.0%
AGTCAGACCGACATGTTGTA+TGG + chr3_1:42917644-42917663 Msa0358170:intron 45.0%
GACCGACATGTTGTATGGTA+CGG + chr3_1:42917649-42917668 Msa0358170:intron 45.0%
CTCCGTACCATACAACATGT+CGG - chr3_1:42917654-42917673 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG + chr3_1:42917657-42917676 Msa0358170:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG + chr3_1:42917658-42917677 Msa0358170:intron 45.0%
! AAGTAAGTGTAGCGGAGATG+AGG + chr3_1:42917705-42917724 Msa0358170:intron 45.0%
TGACACCATTAGAGAGAGAG+TGG + chr3_1:42917775-42917794 Msa0358170:intron 45.0%
GACACCATTAGAGAGAGAGT+GGG + chr3_1:42917776-42917795 Msa0358170:intron 45.0%
CTTCTTACAACGGCATCTAC+GGG - chr3_1:42917869-42917888 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG + chr3_1:42917892-42917911 Msa0358170:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG + chr3_1:42917902-42917921 Msa0358170:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr3_1:42918048-42918067 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr3_1:42918049-42918068 None:intergenic 45.0%
CAAGTATAGGGCCCAAGAAA+TGG + chr3_1:42918232-42918251 Msa0358170:intron 45.0%
AGTATAGGGCCCAAGAAATG+GGG + chr3_1:42918234-42918253 Msa0358170:intron 45.0%
GAAGATCCTCCCCATTTCTT+GGG - chr3_1:42918246-42918265 None:intergenic 45.0%
TGACCAAGAAGTCCTTACTG+TGG + chr3_1:42918322-42918341 Msa0358170:intron 45.0%
CTACCACAGTAAGGACTTCT+TGG - chr3_1:42918328-42918347 None:intergenic 45.0%
TATCATTGGAGGACAGTCTG+TGG + chr3_1:42918390-42918409 Msa0358170:intron 45.0%
! GATCAGAGACAAAGCTCTGA+TGG + chr3_1:42918412-42918431 Msa0358170:intron 45.0%
! GACCGCTTCATGCCTTTTAA+AGG + chr3_1:42918863-42918882 Msa0358170:intron 45.0%
! AACAGCAGATTGACTGGTCA+AGG - chr3_1:42919112-42919131 None:intergenic 45.0%
TGGAAGGAAGCAAAGGATAG+AGG + chr3_1:42919223-42919242 Msa0358170:CDS 45.0%
CATTGATCAGAGACATCAGC+TGG + chr3_1:42919338-42919357 Msa0358170:CDS 45.0%
CTAGCATCAACATACCTTCC+TGG - chr3_1:42919474-42919493 None:intergenic 45.0%
GAGGACTTTCAGGATCATAC+TGG - chr3_1:42919512-42919531 None:intergenic 45.0%
CAGAAAAGAGCAGGAAAGAG+AGG + chr3_1:42919568-42919587 Msa0358170:CDS 45.0%
GTCATCGTCCTCTTCTTCTT+CGG - chr3_1:42919718-42919737 None:intergenic 45.0%
TTCAGCATTCTGAGCAGTCT+TGG + chr3_1:42919759-42919778 Msa0358170:CDS 45.0%
CAGTCTTGGTACTAATGCCT+CGG + chr3_1:42919773-42919792 Msa0358170:CDS 45.0%
! GTCAGATGAAGGTGTGTTTG+AGG + chr3_1:42919833-42919852 Msa0358170:CDS 45.0%
!!! TATTTTTATCAAAATATAAA+AGG - chr3_1:42918800-42918819 None:intergenic 5.0%
TGACGGTGGAATAAGGGAGA+GGG - chr3_1:42908943-42908962 None:intergenic 50.0%
ATGACGGTGGAATAAGGGAG+AGG - chr3_1:42908944-42908963 None:intergenic 50.0%
! GGTGGATGACGGTGGAATAA+GGG - chr3_1:42908949-42908968 None:intergenic 50.0%
! TGGTGGATGACGGTGGAATA+AGG - chr3_1:42908950-42908969 None:intergenic 50.0%
GGAGGTGAAGGATTTAGCGA+CGG - chr3_1:42909004-42909023 None:intergenic 50.0%
TTCGTCGACGGGGAATTCAT+CGG - chr3_1:42909025-42909044 None:intergenic 50.0%
TTGGAGGAAGGTTTCGTCGA+CGG - chr3_1:42909037-42909056 None:intergenic 50.0%
!!! TTTTAGGGCCGAAGGTTTGG+AGG - chr3_1:42909053-42909072 None:intergenic 50.0%
!!! TGGTTTTAGGGCCGAAGGTT+TGG - chr3_1:42909056-42909075 None:intergenic 50.0%
GGAGTGAGAATCTCTTCCCA+TGG - chr3_1:42909132-42909151 None:intergenic 50.0%
GGAACCAACTTCACCACCAA+CGG - chr3_1:42909363-42909382 None:intergenic 50.0%
TCGTGAAGCGCATAAGATGG+AGG + chr3_1:42909440-42909459 Msa0358170:CDS 50.0%
ACCAAGATTATCACCCTGGG+AGG + chr3_1:42909720-42909739 Msa0358170:CDS 50.0%
TCCTCCCAGGGTGATAATCT+TGG - chr3_1:42909724-42909743 None:intergenic 50.0%
AAGATTATCACCCTGGGAGG+AGG + chr3_1:42909723-42909742 Msa0358170:CDS 50.0%
! GGGGCATTTGTTGACATTGG+TGG + chr3_1:42910584-42910603 Msa0358170:CDS 50.0%
! AGTGCCTCTGATGGGTAAGT+GGG - chr3_1:42911635-42911654 None:intergenic 50.0%
GCACTGTCCCTAGTTTCTGT+TGG + chr3_1:42911650-42911669 Msa0358170:intron 50.0%
TCTGTTGGTATCCCCACATC+AGG + chr3_1:42911665-42911684 Msa0358170:intron 50.0%
GAATGGGGTGAGCAATGAAC+TGG - chr3_1:42911702-42911721 None:intergenic 50.0%
CATTGCTCACCCCATTCCAA+AGG + chr3_1:42911705-42911724 Msa0358170:intron 50.0%
TCACCCCATTCCAAAGGGAA+GGG + chr3_1:42911711-42911730 Msa0358170:intron 50.0%
ACATATCACCCCCTTCCCTT+TGG - chr3_1:42911724-42911743 None:intergenic 50.0%
! GTTGGTCTGAGTGTCAAACC+TGG + chr3_1:42911788-42911807 Msa0358170:intron 50.0%
! TGAAAGGAGAGGTGCAAGTG+TGG - chr3_1:42911994-42912013 None:intergenic 50.0%
AGTTTGAACCCCCTGATTCC+AGG + chr3_1:42912605-42912624 Msa0358170:intron 50.0%
AGCGAGATCCTTATCGCTTC+CGG + chr3_1:42912919-42912938 Msa0358170:CDS 50.0%
AACGAAGTTCGATCGGGAAC+CGG - chr3_1:42912941-42912960 None:intergenic 50.0%
! CCCGATCGAACTTCGTTTTG+TGG + chr3_1:42912944-42912963 Msa0358170:CDS 50.0%
GTGCAAACCCGCAATTCATC+TGG - chr3_1:42913166-42913185 None:intergenic 50.0%
ATTTGCAGCGTGACTGTGGA+AGG + chr3_1:42913403-42913422 Msa0358170:intron 50.0%
CCATAACCACACGAAGGATG+AGG - chr3_1:42913648-42913667 None:intergenic 50.0%
CCTCATCCTTCGTGTGGTTA+TGG + chr3_1:42913645-42913664 Msa0358170:intron 50.0%
ACAATGTTCCTGGGCAACTC+CGG + chr3_1:42914033-42914052 Msa0358170:intron 50.0%
TTGTCTTGGAGATGCAAGGG+TGG + chr3_1:42914814-42914833 Msa0358170:intron 50.0%
TGTCTTGGAGATGCAAGGGT+GGG + chr3_1:42914815-42914834 Msa0358170:intron 50.0%
!! GGGTGGGCTAATGTGAAATC+AGG + chr3_1:42914831-42914850 Msa0358170:intron 50.0%
GGGCTAATGTGAAATCAGGG+TGG + chr3_1:42914835-42914854 Msa0358170:intron 50.0%
AAATCAGGGTGGCCCTGTTA+TGG + chr3_1:42914846-42914865 Msa0358170:intron 50.0%
AATCAGGGTGGCCCTGTTAT+GGG + chr3_1:42914847-42914866 Msa0358170:intron 50.0%
AGGTGGGGAGTCTGTTAGAA+AGG + chr3_1:42915205-42915224 Msa0358170:intron 50.0%
AGGAACCTAACAGAATGGGG+AGG + chr3_1:42915225-42915244 Msa0358170:intron 50.0%
AACCTAACAGAATGGGGAGG+TGG + chr3_1:42915228-42915247 Msa0358170:intron 50.0%
AGGGTGCATAGATATGAGGG+AGG + chr3_1:42915268-42915287 Msa0358170:intron 50.0%
GGGTGCATAGATATGAGGGA+GGG + chr3_1:42915269-42915288 Msa0358170:intron 50.0%
GGGAATGGAAGCGAAAGAGA+CGG + chr3_1:42915289-42915308 Msa0358170:intron 50.0%
GCGAAAGAGACGGAATCTGT+TGG + chr3_1:42915299-42915318 Msa0358170:intron 50.0%
TCTAGGAAGCTTAGGCCTGA+CGG + chr3_1:42915325-42915344 Msa0358170:intron 50.0%
GTACGACTTAGGAACGGAGT+TGG + chr3_1:42915752-42915771 Msa0358170:intron 50.0%
GTTGTGGGTTCAAACCCAGA+TGG + chr3_1:42915777-42915796 Msa0358170:intron 50.0%
GCGGGATACCAAATAGCAGA+TGG + chr3_1:42916201-42916220 Msa0358170:intron 50.0%
CCTCACCCCTTTCTTCTCTA+GGG - chr3_1:42917067-42917086 None:intergenic 50.0%
TCCTCACCCCTTTCTTCTCT+AGG - chr3_1:42917068-42917087 None:intergenic 50.0%
TTCGACTAGTGTGAAGACGC+AGG + chr3_1:42917128-42917147 Msa0358170:intron 50.0%
ACTAGTGTGAAGACGCAGGA+TGG + chr3_1:42917132-42917151 Msa0358170:intron 50.0%
CTAGTGTGAAGACGCAGGAT+GGG + chr3_1:42917133-42917152 Msa0358170:intron 50.0%
TAGTGTGAAGACGCAGGATG+GGG + chr3_1:42917134-42917153 Msa0358170:intron 50.0%
AAGGACTTAGGGTTGACCCT+TGG - chr3_1:42917194-42917213 None:intergenic 50.0%
! TAGTCTTGCTTGGTGAGTCG+AGG + chr3_1:42917295-42917314 Msa0358170:intron 50.0%
! AGTCTTGCTTGGTGAGTCGA+GGG + chr3_1:42917296-42917315 Msa0358170:intron 50.0%
GAGTCGAGGGAGGAGTTAAA+TGG + chr3_1:42917309-42917328 Msa0358170:intron 50.0%
TAAATGGGAGGCTAGAGACC+TGG + chr3_1:42917325-42917344 Msa0358170:intron 50.0%
! AGGCAAGCCTTAGAAGCGTA+TGG + chr3_1:42917348-42917367 Msa0358170:intron 50.0%
TCGCCTGAGTAGAAGCAAGA+CGG + chr3_1:42917374-42917393 Msa0358170:intron 50.0%
ACTCCGTCTTGCTTCTACTC+AGG - chr3_1:42917380-42917399 None:intergenic 50.0%
AAGGAGAAGTGGGTCTACCT+TGG + chr3_1:42917422-42917441 Msa0358170:intron 50.0%
AGGATGTTGCGCTGGATGAA+TGG + chr3_1:42917725-42917744 Msa0358170:intron 50.0%
TACGCCCACTCTCTCTCTAA+TGG - chr3_1:42917783-42917802 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr3_1:42918044-42918063 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr3_1:42918050-42918069 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr3_1:42918047-42918066 Msa0358170:intron 50.0%
GGAAGATCCTCCCCATTTCT+TGG - chr3_1:42918247-42918266 None:intergenic 50.0%
TTTGCTAACCAGCGGCAGAT+AGG - chr3_1:42918530-42918549 None:intergenic 50.0%
GGAAGCAAAGGATAGAGGTG+AGG + chr3_1:42919228-42919247 Msa0358170:CDS 50.0%
! TACCTTCCTGGCTCTTCCAA+TGG - chr3_1:42919462-42919481 None:intergenic 50.0%
!! TTGTGGGCAAGGGTACTGTT+TGG + chr3_1:42919616-42919635 Msa0358170:CDS 50.0%
TGAAGCTGCCGAAGAAGAAG+AGG + chr3_1:42919707-42919726 Msa0358170:CDS 50.0%
!! GGAGTAGAGGTGGTGGATGA+CGG - chr3_1:42908960-42908979 None:intergenic 55.0%
GATTTAGCGACGGTGGTGAG+AGG - chr3_1:42908994-42909013 None:intergenic 55.0%
GGTGAAGGATTTAGCGACGG+TGG - chr3_1:42909001-42909020 None:intergenic 55.0%
GGGGAATTCATCGGAGGTGA+AGG - chr3_1:42909016-42909035 None:intergenic 55.0%
TGGAGGAAGGTTTCGTCGAC+GGG - chr3_1:42909036-42909055 None:intergenic 55.0%
AACCGCGTTCGATCCAGTTG+CGG - chr3_1:42909104-42909123 None:intergenic 55.0%
CAACTGGATCGAACGCGGTT+GGG + chr3_1:42909104-42909123 Msa0358170:CDS 55.0%
AGAAGTTCCTCTGAGCTCGC+CGG + chr3_1:42909191-42909210 Msa0358170:CDS 55.0%
! GGAAATGGGAGTGACGGAAG+AGG + chr3_1:42909269-42909288 Msa0358170:CDS 55.0%
GACTAAATGGGCAGGACCGT+TGG + chr3_1:42909344-42909363 Msa0358170:CDS 55.0%
TAAATGGGCAGGACCGTTGG+TGG + chr3_1:42909347-42909366 Msa0358170:CDS 55.0%
!! AGGACCGTTGGTGGTGAAGT+TGG + chr3_1:42909356-42909375 Msa0358170:CDS 55.0%
AGATGGAGGCGAAGAGAGTG+AGG + chr3_1:42909454-42909473 Msa0358170:CDS 55.0%
! TGCCTCTTTTCCTCCTCCCA+GGG - chr3_1:42909736-42909755 None:intergenic 55.0%
! TTGCCTCTTTTCCTCCTCCC+AGG - chr3_1:42909737-42909756 None:intergenic 55.0%
TGGGAGGAGGAAAAGAGGCA+AGG + chr3_1:42909736-42909755 Msa0358170:CDS 55.0%
AGCTCCCACTTACCCATCAG+AGG + chr3_1:42911628-42911647 Msa0358170:intron 55.0%
! CAGTGCCTCTGATGGGTAAG+TGG - chr3_1:42911636-42911655 None:intergenic 55.0%
CTAGGGACAGTGCCTCTGAT+GGG - chr3_1:42911643-42911662 None:intergenic 55.0%
ACTAGGGACAGTGCCTCTGA+TGG - chr3_1:42911644-42911663 None:intergenic 55.0%
CTCACCCCATTCCAAAGGGA+AGG + chr3_1:42911710-42911729 Msa0358170:intron 55.0%
CACCCCATTCCAAAGGGAAG+GGG + chr3_1:42911712-42911731 Msa0358170:intron 55.0%
ACCCCATTCCAAAGGGAAGG+GGG + chr3_1:42911713-42911732 Msa0358170:intron 55.0%
!! ACCCCCTTCCCTTTGGAATG+GGG - chr3_1:42911717-42911736 None:intergenic 55.0%
!! CACCCCCTTCCCTTTGGAAT+GGG - chr3_1:42911718-42911737 None:intergenic 55.0%
! TCACCCCCTTCCCTTTGGAA+TGG - chr3_1:42911719-42911738 None:intergenic 55.0%
!! GAAAGAGGCATCAACCACCG+AGG - chr3_1:42911824-42911843 None:intergenic 55.0%
GGTACTAAGAAAGGCAGGGG+CGG + chr3_1:42911862-42911881 Msa0358170:intron 55.0%
CTACTTGTGGGAGTCGAACC+AGG + chr3_1:42912169-42912188 Msa0358170:intron 55.0%
TGTGGGAGTCGAACCAGGTT+AGG + chr3_1:42912174-42912193 Msa0358170:intron 55.0%
TAGCCAGGACCTGGAATCAG+GGG - chr3_1:42912617-42912636 None:intergenic 55.0%
GTAGCCAGGACCTGGAATCA+GGG - chr3_1:42912618-42912637 None:intergenic 55.0%
CTTTCTTCAGTGGCGTAGCC+AGG - chr3_1:42912632-42912651 None:intergenic 55.0%
CTGGCTACGCCACTGAAGAA+AGG + chr3_1:42912630-42912649 Msa0358170:intron 55.0%
ATCGGGAACCGGAAGCGATA+AGG - chr3_1:42912930-42912949 None:intergenic 55.0%
AGATCCAGGAGACAAGCCAG+AGG + chr3_1:42913443-42913462 Msa0358170:CDS 55.0%
! TCTTCCTCTGGCTTGTCTCC+TGG - chr3_1:42913450-42913469 None:intergenic 55.0%
CGAAGGATGAGGGTGGAAAC+AGG - chr3_1:42913637-42913656 None:intergenic 55.0%
TTCCACCCTCATCCTTCGTG+TGG + chr3_1:42913639-42913658 Msa0358170:intron 55.0%
AACCACACGAAGGATGAGGG+TGG - chr3_1:42913644-42913663 None:intergenic 55.0%
TGGGGTCCATAACCACACGA+AGG - chr3_1:42913654-42913673 None:intergenic 55.0%
TCTACTGGGCACCCTGTTAC+TGG + chr3_1:42915077-42915096 Msa0358170:intron 55.0%
CTACTGGGCACCCTGTTACT+GGG + chr3_1:42915078-42915097 Msa0358170:intron 55.0%
AGCCACCTCCCCATTCTGTT+AGG - chr3_1:42915233-42915252 None:intergenic 55.0%
CGACTTAGGAACGGAGTTGG+AGG + chr3_1:42915755-42915774 Msa0358170:intron 55.0%
AGGAACGGAGTTGGAGGTTG+TGG + chr3_1:42915761-42915780 Msa0358170:intron 55.0%
GGAACGGAGTTGGAGGTTGT+GGG + chr3_1:42915762-42915781 Msa0358170:intron 55.0%
GTGGGTTCAAACCCAGATGG+AGG + chr3_1:42915780-42915799 Msa0358170:intron 55.0%
TATGCCTGGGAGGTCGACTA+TGG + chr3_1:42916918-42916937 Msa0358170:intron 55.0%
TGGGAGGTCGACTATGGAAG+CGG + chr3_1:42916924-42916943 Msa0358170:intron 55.0%
! GACGCGTGATGGAGCGTTAT+CGG + chr3_1:42916959-42916978 Msa0358170:intron 55.0%
! CGTGATGGAGCGTTATCGGA+CGG + chr3_1:42916963-42916982 Msa0358170:intron 55.0%
CCCTAGAGAAGAAAGGGGTG+AGG + chr3_1:42917064-42917083 Msa0358170:intron 55.0%
CGAGGGAGGAGTTAAATGGG+AGG + chr3_1:42917313-42917332 Msa0358170:intron 55.0%
GAGAAGTGGGTCTACCTTGG+AGG + chr3_1:42917425-42917444 Msa0358170:intron 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG + chr3_1:42917661-42917680 Msa0358170:intron 55.0%
CTAAGTGGGGTCGGCTACAT+GGG - chr3_1:42918035-42918054 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr3_1:42918036-42918055 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr3_1:42918035-42918054 Msa0358170:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr3_1:42918036-42918055 Msa0358170:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr3_1:42918042-42918061 Msa0358170:intron 55.0%
ATAGGGCCCAAGAAATGGGG+AGG + chr3_1:42918237-42918256 Msa0358170:intron 55.0%
TGCCATTGGAAGAGCCAGGA+AGG + chr3_1:42919457-42919476 Msa0358170:CDS 55.0%
!! GTAGAGGTGGTGGATGACGG+TGG - chr3_1:42908957-42908976 None:intergenic 60.0%
TTGCGGTGGAGTAGAGGTGG+TGG - chr3_1:42908967-42908986 None:intergenic 60.0%
GGTTTGCGGTGGAGTAGAGG+TGG - chr3_1:42908970-42908989 None:intergenic 60.0%
! GGTGGTTTGCGGTGGAGTAG+AGG - chr3_1:42908973-42908992 None:intergenic 60.0%
! TGGTGAGAGGTGGTTTGCGG+TGG - chr3_1:42908981-42909000 None:intergenic 60.0%
CGGTGGTGAGAGGTGGTTTG+CGG - chr3_1:42908984-42909003 None:intergenic 60.0%
TTAGCGACGGTGGTGAGAGG+TGG - chr3_1:42908991-42909010 None:intergenic 60.0%
GTCGACGGGGAATTCATCGG+AGG - chr3_1:42909022-42909041 None:intergenic 60.0%
GGAGGAAGGTTTCGTCGACG+GGG - chr3_1:42909035-42909054 None:intergenic 60.0%
AGGGCCGAAGGTTTGGAGGA+AGG - chr3_1:42909049-42909068 None:intergenic 60.0%
GCAACTGGATCGAACGCGGT+TGG + chr3_1:42909103-42909122 Msa0358170:CDS 60.0%
CTCCTGAAGCCGAATTCGCG+CGG + chr3_1:42909148-42909167 Msa0358170:CDS 60.0%
GAGACTCGTCCGCGCGAATT+CGG - chr3_1:42909160-42909179 None:intergenic 60.0%
! TGGTGAAGTTGGTTCCGCCG+AGG + chr3_1:42909367-42909386 Msa0358170:CDS 60.0%
! GGTGAAGTTGGTTCCGCCGA+GGG + chr3_1:42909368-42909387 Msa0358170:CDS 60.0%
! AGTTGGTTCCGCCGAGGGAT+TGG + chr3_1:42909373-42909392 Msa0358170:CDS 60.0%
CCTCTTGGAGGCCAATCCCT+CGG - chr3_1:42909387-42909406 None:intergenic 60.0%
!! CGAGGGATTGGCCTCCAAGA+GGG + chr3_1:42909385-42909404 Msa0358170:CDS 60.0%
!! GGATTGGCCTCCAAGAGGGT+GGG + chr3_1:42909389-42909408 Msa0358170:CDS 60.0%
GGAGGCGAAGAGAGTGAGGT+TGG + chr3_1:42909458-42909477 Msa0358170:CDS 60.0%
GGCGAAGAGAGTGAGGTTGG+AGG + chr3_1:42909461-42909480 Msa0358170:CDS 60.0%
CACCCTGGGAGGAGGAAAAG+AGG + chr3_1:42909731-42909750 Msa0358170:CDS 60.0%
GTGTCAAACCTGGGCACCTC+TGG + chr3_1:42911798-42911817 Msa0358170:intron 60.0%
GAACACCCTGACCCCTACGT+GGG - chr3_1:42911889-42911908 None:intergenic 60.0%
TGAACACCCTGACCCCTACG+TGG - chr3_1:42911890-42911909 None:intergenic 60.0%
AACCCCCTGATTCCAGGTCC+TGG + chr3_1:42912611-42912630 Msa0358170:intron 60.0%
AGCCAGGACCTGGAATCAGG+GGG - chr3_1:42912616-42912635 None:intergenic 60.0%
CGTAGCCAGGACCTGGAATC+AGG - chr3_1:42912619-42912638 None:intergenic 60.0%
TTCTATGGCCGGAGTTGCCC+AGG - chr3_1:42914044-42914063 None:intergenic 60.0%
GCTTCCATAGTCGACCTCCC+AGG - chr3_1:42916925-42916944 None:intergenic 60.0%
! CTTGCTTGGTGAGTCGAGGG+AGG + chr3_1:42917299-42917318 Msa0358170:intron 60.0%
ATGGGAGGCTAGAGACCTGG+AGG + chr3_1:42917328-42917347 Msa0358170:intron 60.0%
!! CGCTTCTAAGGCTTGCCTCC+AGG - chr3_1:42917346-42917365 None:intergenic 60.0%
CGGAGATGAGGATGTTGCGC+TGG + chr3_1:42917717-42917736 Msa0358170:intron 60.0%
GGTCTGCCATTGGAAGAGCC+AGG + chr3_1:42919453-42919472 Msa0358170:CDS 60.0%
ACGAAGCACGTCGCCGCAAC+TGG + chr3_1:42909088-42909107 Msa0358170:CDS 65.0%
CGCCGCAACTGGATCGAACG+CGG + chr3_1:42909099-42909118 Msa0358170:CDS 65.0%
TCGAACGCGGTTGGGCTCCA+TGG + chr3_1:42909112-42909131 Msa0358170:CDS 65.0%
CGAACGCGGTTGGGCTCCAT+GGG + chr3_1:42909113-42909132 Msa0358170:CDS 65.0%
GTCCGCGCGAATTCGGCTTC+AGG - chr3_1:42909153-42909172 None:intergenic 65.0%
GCGCGGACGAGTCTCAACGA+AGG + chr3_1:42909165-42909184 Msa0358170:CDS 65.0%
! ATCGACTCCGGCGAGCTCAG+AGG - chr3_1:42909201-42909220 None:intergenic 65.0%
CTTGGAGGCCAATCCCTCGG+CGG - chr3_1:42909384-42909403 None:intergenic 65.0%
!! CCGAGGGATTGGCCTCCAAG+AGG + chr3_1:42909384-42909403 Msa0358170:CDS 65.0%
!! GGGATTGGCCTCCAAGAGGG+TGG + chr3_1:42909388-42909407 Msa0358170:CDS 65.0%
TTGGCCTCCAAGAGGGTGGG+AGG + chr3_1:42909392-42909411 Msa0358170:CDS 65.0%
TCCACCTCCCACCCTCTTGG+AGG - chr3_1:42909399-42909418 None:intergenic 65.0%
CGATCCACCTCCCACCCTCT+TGG - chr3_1:42909402-42909421 None:intergenic 65.0%
AACCTGGGCACCTCTGGCCT+CGG + chr3_1:42911804-42911823 Msa0358170:intron 65.0%
GCATCAACCACCGAGGCCAG+AGG - chr3_1:42911817-42911836 None:intergenic 65.0%
TCAGTGGCGTAGCCAGGACC+TGG - chr3_1:42912626-42912645 None:intergenic 65.0%
! GGCTGCACTTGCTGAGCGTG+AGG + chr3_1:42918766-42918785 Msa0358170:CDS 65.0%
GAAGCGGTCCCTAGAGCCAG+TGG - chr3_1:42918852-42918871 None:intergenic 65.0%
GCCTCCAAGAGGGTGGGAGG+TGG + chr3_1:42909395-42909414 Msa0358170:CDS 70.0%
GCGGACCCACGTAGGGGTCA+GGG + chr3_1:42911881-42911900 Msa0358170:intron 70.0%
!! CACCGAGGCCAGAGGTGCCC+AGG - chr3_1:42911809-42911828 None:intergenic 75.0%
CTGGGCACCTCTGGCCTCGG+TGG + chr3_1:42911807-42911826 Msa0358170:intron 75.0%
AGGCAGGGGCGGACCCACGT+AGG + chr3_1:42911873-42911892 Msa0358170:intron 75.0%
GGCAGGGGCGGACCCACGTA+GGG + chr3_1:42911874-42911893 Msa0358170:intron 75.0%
GCAGGGGCGGACCCACGTAG+GGG + chr3_1:42911875-42911894 Msa0358170:intron 75.0%
GGCGGACCCACGTAGGGGTC+AGG + chr3_1:42911880-42911899 Msa0358170:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 42908841 42920041 42908841 ID=Msa0358170;Name=Msa0358170
chr3_1 mRNA 42908841 42920041 42908841 ID=Msa0358170-mRNA-1;Parent=Msa0358170;Name=Msa0358170-mRNA-1;_AED=0.04;_eAED=0.04;_QI=42|1|1|1|0.81|0.91|12|181|668
chr3_1 exon 42908841 42909608 42908841 ID=Msa0358170-mRNA-1:exon:7427;Parent=Msa0358170-mRNA-1
chr3_1 exon 42909716 42909775 42909716 ID=Msa0358170-mRNA-1:exon:7428;Parent=Msa0358170-mRNA-1
chr3_1 exon 42909883 42909912 42909883 ID=Msa0358170-mRNA-1:exon:7429;Parent=Msa0358170-mRNA-1
chr3_1 exon 42910545 42910618 42910545 ID=Msa0358170-mRNA-1:exon:7430;Parent=Msa0358170-mRNA-1
chr3_1 exon 42911285 42911366 42911285 ID=Msa0358170-mRNA-1:exon:7431;Parent=Msa0358170-mRNA-1
chr3_1 exon 42912915 42912988 42912915 ID=Msa0358170-mRNA-1:exon:7432;Parent=Msa0358170-mRNA-1
chr3_1 exon 42913111 42913177 42913111 ID=Msa0358170-mRNA-1:exon:7433;Parent=Msa0358170-mRNA-1
chr3_1 exon 42913411 42913503 42913411 ID=Msa0358170-mRNA-1:exon:7434;Parent=Msa0358170-mRNA-1
chr3_1 exon 42915479 42915655 42915479 ID=Msa0358170-mRNA-1:exon:7435;Parent=Msa0358170-mRNA-1
chr3_1 exon 42918737 42918787 42918737 ID=Msa0358170-mRNA-1:exon:7436;Parent=Msa0358170-mRNA-1
chr3_1 exon 42919208 42919359 42919208 ID=Msa0358170-mRNA-1:exon:7437;Parent=Msa0358170-mRNA-1
chr3_1 exon 42919440 42920041 42919440 ID=Msa0358170-mRNA-1:exon:7438;Parent=Msa0358170-mRNA-1
chr3_1 five_prime_UTR 42908841 42908882 42908841 ID=Msa0358170-mRNA-1:five_prime_utr;Parent=Msa0358170-mRNA-1
chr3_1 CDS 42908883 42909608 42908883 ID=Msa0358170-mRNA-1:cds;Parent=Msa0358170-mRNA-1
chr3_1 CDS 42909716 42909775 42909716 ID=Msa0358170-mRNA-1:cds;Parent=Msa0358170-mRNA-1
chr3_1 CDS 42909883 42909912 42909883 ID=Msa0358170-mRNA-1:cds;Parent=Msa0358170-mRNA-1
chr3_1 CDS 42910545 42910618 42910545 ID=Msa0358170-mRNA-1:cds;Parent=Msa0358170-mRNA-1
chr3_1 CDS 42911285 42911366 42911285 ID=Msa0358170-mRNA-1:cds;Parent=Msa0358170-mRNA-1
chr3_1 CDS 42912915 42912988 42912915 ID=Msa0358170-mRNA-1:cds;Parent=Msa0358170-mRNA-1
chr3_1 CDS 42913111 42913177 42913111 ID=Msa0358170-mRNA-1:cds;Parent=Msa0358170-mRNA-1
chr3_1 CDS 42913411 42913503 42913411 ID=Msa0358170-mRNA-1:cds;Parent=Msa0358170-mRNA-1
chr3_1 CDS 42915479 42915655 42915479 ID=Msa0358170-mRNA-1:cds;Parent=Msa0358170-mRNA-1
chr3_1 CDS 42918737 42918787 42918737 ID=Msa0358170-mRNA-1:cds;Parent=Msa0358170-mRNA-1
chr3_1 CDS 42919208 42919359 42919208 ID=Msa0358170-mRNA-1:cds;Parent=Msa0358170-mRNA-1
chr3_1 CDS 42919440 42919860 42919440 ID=Msa0358170-mRNA-1:cds;Parent=Msa0358170-mRNA-1
chr3_1 three_prime_UTR 42919861 42920041 42919861 ID=Msa0358170-mRNA-1:three_prime_utr;Parent=Msa0358170-mRNA-1
Gene Sequence

>Msa0358170

ATGCAAGTCTTCCCCAATTCTTATCTCTTCACTTTCCCTAAACCCTTAAACCTTAAACCCTCTCCCTTATTCCACCGTCATCCACCACCTCTACTCCACCGCAAACCACCTCTCACCACCGTCGCTAAATCCTTCACCTCCGATGAATTCCCCGTCGACGAAACCTTCCTCCAAACCTTCGGCCCTAAAACCAAAGAATCTGAAGACGAAGCACGTCGCCGCAACTGGATCGAACGCGGTTGGGCTCCATGGGAAGAGATTCTCACTCCTGAAGCCGAATTCGCGCGGACGAGTCTCAACGAAGGTGAAGAAGTTCCTCTGAGCTCGCCGGAGTCGATTGAAGCTTTTAGAATGTTGAACCCTAGGTATAGGAAGAAGAAGATTGAGGAAATGGGAGTGACGGAAGAGGAGTATTTGGCGAAGCAGTTTGAGATTAAGGAAGATGTTCCGGAGGAGTTGAAGACTAAATGGGCAGGACCGTTGGTGGTGAAGTTGGTTCCGCCGAGGGATTGGCCTCCAAGAGGGTGGGAGGTGGATCGAGAAGAGCTTGCGTTTATTCGTGAAGCGCATAAGATGGAGGCGAAGAGAGTGAGGTTGGAGGATATTGAAAATGGTGTTAGAACTGAAACTGATGATGTGTGTTTGGATAGGTATAAGGTGTTTTTGAAACAGTATAATGAGTGGGTGGAAGCTAATAAGGATTTATTGGAAGAGGAATCTTATAAGTTAGACCAAGATTATCACCCTGGGAGGAGGAAAAGAGGCAAGGATTACAAGGATGGCATGTACGAGCTACCATTCTATTATCCTGGCCAAATTTGTGTGGGGAAGGTGACAACTTTGCATCTCTATCAAGGGGCATTTGTTGACATTGGTGGAGTATACGATGGGTGGGTTCCTATAAAGAACAATGATTGGTTTTGGATTCGCCATCACATAAAAGTGGGTATGACCGTCATTGTTGAAATTACGGCAAAGCGAGATCCTTATCGCTTCCGGTTCCCGATCGAACTTCGTTTTGTGGATCCAAATATAGATCATCTGATCTTTAATAGATTTGACTTCCCACCAATATTTCACCGTGACGAAGATACTAATCCAGATGAATTGCGGCGTGACTGTGGAAGGCCTCCTATTCCTAGAAAAGATCCAGGAGACAAGCCAGAGGAAGAACCTCTATTTTCTAATCACCCATATGTTGAAAAGTTGTGGCAGATTAATGTAGCTGAGCAAATGATTTTGAATGATATGGATATTAATCCTGATAAATATAAAGGCAAAAAGCTATCAGACTTGGTTGACGAAGATGATTTTGATGAAGAAAAATCAGTTCAGCAGACAAAAGTTCCTTATAAGAATGCATTAGTACCAAAAATAACTATGAAAACAAGTGTTAAAGAGCTGGACTTAGAGGCTGCACTTGCTGAGCGTGAGCTCCATAAGAAACTATGGAAGGAAGCAAAGGATAGAGGTGAGGACTACAAAATCACTACATTGAAGCGCAATATTGAGATGGATGAATATGATTTCATGCATTGGCGTAGATCATTTGAAGAAAGAGAAGCATTGATCAGAGACATCAGCTGTCGTAAAACTCTTGGTCTGCCATTGGAAGAGCCAGGAAGGTATGTTGATGCTAGTTTTTTTGGTAAAGACCAGTATGATCCTGAAAGTCCTCTGTATCGTTATGACTATTGGGGGGAACCCAAGAATTCAGAAAAGAGCAGGAAAGAGAGGATGACAGATACCCATAACAAATCAATTGTGGGCAAGGGTACTGTTTGGTGTGAGATGCCGTACGAAGATAGCGTAAAACATCAGTCAAAAGAAGTTGACGAGTATTCAAAGCAAGGTGAAGCTGCCGAAGAAGAAGAGGACGATGACGATGATGATGATGACTTTGACTTCAGCATTCTGAGCAGTCTTGGTACTAATGCCTCGGATCAAATTCATGTTAATGGGACTGAGACTTCTAGATTGTCAGATGAAGGTGTGTTTGAGGACTGA
Protein sequence

>Msa0358170

MQVFPNSYLFTFPKPLNLKPSPLFHRHPPPLLHRKPPLTTVAKSFTSDEFPVDETFLQTFGPKTKESEDEARRRNWIERGWAPWEEILTPEAEFARTSLNEGEEVPLSSPESIEAFRMLNPRYRKKKIEEMGVTEEEYLAKQFEIKEDVPEELKTKWAGPLVVKLVPPRDWPPRGWEVDREELAFIREAHKMEAKRVRLEDIENGVRTETDDVCLDRYKVFLKQYNEWVEANKDLLEEESYKLDQDYHPGRRKRGKDYKDGMYELPFYYPGQICVGKVTTLHLYQGAFVDIGGVYDGWVPIKNNDWFWIRHHIKVGMTVIVEITAKRDPYRFRFPIELRFVDPNIDHLIFNRFDFPPIFHRDEDTNPDELRRDCGRPPIPRKDPGDKPEEEPLFSNHPYVEKLWQINVAEQMILNDMDINPDKYKGKKLSDLVDEDDFDEEKSVQQTKVPYKNALVPKITMKTSVKELDLEAALAERELHKKLWKEAKDRGEDYKITTLKRNIEMDEYDFMHWRRSFEEREALIRDISCRKTLGLPLEEPGRYVDASFFGKDQYDPESPLYRYDYWGEPKNSEKSRKERMTDTHNKSIVGKGTVWCEMPYEDSVKHQSKEVDEYSKQGEAAEEEEDDDDDDDDFDFSILSSLGTNASDQIHVNGTETSRLSDEGVFED*