AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1106860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1106860 MtrunA17_Chr7g0239641 94.729 683 31 2 1 679 1 682 0.0 1316
Msa1106860 MtrunA17_Chr4g0025571 35.783 313 175 8 381 672 587 894 1.98e-44 171
Msa1106860 MtrunA17_Chr4g0025571 29.630 189 107 5 6 181 5 180 9.94e-18 87.8
Msa1106860 MtrunA17_Chr2g0322001 46.111 180 94 2 496 672 676 855 1.08e-43 169
Msa1106860 MtrunA17_Chr2g0322001 27.442 215 131 8 6 208 5 206 5.73e-14 75.9
Msa1106860 MtrunA17_Chr1g0184231 45.213 188 94 4 494 672 472 659 1.80e-40 157
Msa1106860 MtrunA17_Chr1g0184231 33.333 183 80 4 3 175 2 152 1.33e-23 105
Msa1106860 MtrunA17_Chr7g0261061 36.304 303 153 8 383 672 382 657 5.59e-40 156
Msa1106860 MtrunA17_Chr7g0261061 32.955 176 101 4 5 175 4 167 8.83e-17 84.3
Msa1106860 MtrunA17_Chr1g0188861 41.011 178 95 3 504 672 573 749 5.24e-35 142
Msa1106860 MtrunA17_Chr1g0152981 37.736 106 58 3 82 181 97 200 3.49e-14 74.3
Msa1106860 MtrunA17_Chr2g0317011 29.379 177 110 5 5 175 19 186 1.05e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1106860 AT2G27230.2 28.058 695 393 22 6 672 5 620 1.35e-60 215
Msa1106860 AT2G27230.1 28.058 695 393 22 6 672 5 620 1.35e-60 215
Msa1106860 AT2G31280.1 36.517 356 189 14 330 676 390 717 3.96e-45 172
Msa1106860 AT2G31280.1 35.795 176 72 5 8 175 7 149 3.64e-20 95.9
Msa1106860 AT2G31280.3 35.121 373 188 14 330 676 390 734 1.08e-43 168
Msa1106860 AT2G31280.3 35.795 176 72 5 8 175 7 149 4.19e-20 95.5
Msa1106860 AT1G06150.1 45.856 181 93 3 497 672 548 728 1.15e-40 159
Msa1106860 AT1G06150.1 36.257 171 91 4 5 175 4 156 4.86e-23 104
Msa1106860 AT1G06150.2 45.355 183 93 3 497 672 548 730 1.20e-40 159
Msa1106860 AT1G06150.2 36.257 171 91 4 5 175 4 156 4.75e-23 105
Msa1106860 AT1G64625.3 41.304 184 96 3 491 672 320 493 4.47e-38 148
Msa1106860 AT1G64625.1 33.096 281 154 6 394 672 269 517 5.66e-38 149
Msa1106860 AT2G31280.2 34.551 356 174 14 330 654 362 689 5.82e-38 151
Msa1106860 AT2G31280.2 33.333 156 61 5 5 158 30 144 1.86e-12 71.2
Msa1106860 AT1G64625.2 41.304 184 96 3 491 672 334 507 6.22e-38 148
Msa1106860 AT1G64625.4 46.154 78 42 0 491 568 334 411 3.25e-17 85.1
Msa1106860 AT3G15240.2 27.419 186 97 4 10 175 38 205 2.89e-11 66.2

Find 189 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCATCTTGAAAGGGATTT+TGG 0.115506 7_3:-47525424 Msa1106860:CDS
TGACTAATGGTACAAATAAT+TGG 0.125831 7_3:-47525084 Msa1106860:three_prime_UTR
TATGATTACACTGAATTATA+TGG 0.226378 7_3:+47524985 None:intergenic
AACTACATTTCCTTCATATA+AGG 0.252132 7_3:+47525172 None:intergenic
TCATCTTTCAATGGCAATTC+AGG 0.257213 7_3:-47526556 Msa1106860:CDS
ATTGAATTTCTCGTTGATAT+TGG 0.272833 7_3:+47527437 None:intergenic
ATGGAAACTGTGAGCACTTC+TGG 0.277744 7_3:-47529904 Msa1106860:five_prime_UTR
TGTTCCCTCAATGGCTGAAT+TGG 0.281284 7_3:-47526968 Msa1106860:CDS
GAAAACTTTGGTCCACTAAT+AGG 0.282150 7_3:+47526484 None:intergenic
CTCGAAGAATATACATCATC+TGG 0.293603 7_3:+47528837 None:intergenic
TTGCTTCTCATAAGTACAAT+AGG 0.298234 7_3:-47529801 Msa1106860:five_prime_UTR
AACTCTATCGCATTATTTGA+TGG 0.303118 7_3:-47527343 Msa1106860:CDS
TAAATTGCTTTCTTGGAGTT+TGG 0.313697 7_3:-47529954 Msa1106860:five_prime_UTR
ACAGCATCCAAGAGATATTC+TGG 0.323266 7_3:+47526793 None:intergenic
TTTGGATTTAGAATTGGATT+TGG 0.324270 7_3:-47530714 Msa1106860:five_prime_UTR
TCAAATGCGCAGCTTCTTCC+TGG 0.324435 7_3:+47525916 None:intergenic
GGTCCACTAATAGGCTTCAT+AGG 0.331664 7_3:+47526493 None:intergenic
TAAGTACATCATGTGCTTTA+CGG 0.335446 7_3:+47526223 None:intergenic
ACCTTGTTTGGATTTAGAAT+TGG 0.343901 7_3:-47530720 Msa1106860:five_prime_UTR
ATTCAATTTCATTCATCGTT+TGG 0.351030 7_3:-47527421 Msa1106860:CDS
CAGAAAAGTAATCAGCCTTT+GGG 0.356079 7_3:-47528891 Msa1106860:CDS
TGGCTTCTTCAATTTGCATC+TGG 0.357988 7_3:-47528361 Msa1106860:CDS
AGAGAAGGAACTGATGATTC+AGG 0.361342 7_3:-47528816 Msa1106860:CDS
TCTTCATCTGAGATATATTT+CGG 0.368517 7_3:+47526898 None:intergenic
TCATTTGAGACAAAACATAT+TGG 0.369387 7_3:-47527189 Msa1106860:CDS
GTCTCGTCGCAAATACAGTT+TGG 0.371269 7_3:-47528760 Msa1106860:CDS
CCAGAAAAGTAATCAGCCTT+TGG 0.374968 7_3:-47528892 Msa1106860:CDS
CTTTCTTCAGAATTGATTTG+TGG 0.382325 7_3:+47526670 None:intergenic
GCCTATAGTCATAGAAGATC+TGG 0.383505 7_3:-47525872 Msa1106860:CDS
CTTCTCCATTGTTCCCTCAA+TGG 0.383886 7_3:-47526977 Msa1106860:CDS
CATTGAAAGATGATAGAAAC+TGG 0.394401 7_3:+47526566 None:intergenic
TTCAATTACACAATTGTTGA+AGG 0.394878 7_3:-47529609 Msa1106860:CDS
TGCTTCTCATAAGTACAATA+GGG 0.395535 7_3:-47529800 Msa1106860:five_prime_UTR
GACTAATGGTACAAATAATT+GGG 0.400774 7_3:-47525083 Msa1106860:three_prime_UTR
TATTCTGGATGAATTCCTTC+AGG 0.401336 7_3:+47526808 None:intergenic
CATGTAGATCCAACAGTGTT+AGG 0.402173 7_3:-47526735 Msa1106860:CDS
TCCAAACAAGGTAGAAAAGA+TGG 0.408038 7_3:+47530731 None:intergenic
CGTTGATGTATTTATATTGA+AGG 0.413499 7_3:+47527287 None:intergenic
TGATATTGGTAATAAATTCC+AGG 0.413573 7_3:+47527451 None:intergenic
AATGGCACTATGCTGTCTTT+TGG 0.418476 7_3:-47529568 Msa1106860:CDS
TGGGAACTGATTCTCAAGAT+TGG 0.424555 7_3:-47527374 Msa1106860:CDS
TAATTGTACACCATTGAACT+TGG 0.425108 7_3:-47527394 Msa1106860:CDS
GTTGACAATGATGGACAGTT+TGG 0.427391 7_3:-47527108 Msa1106860:CDS
ATCACTTGGTAGAAGAGATA+TGG 0.429697 7_3:-47527146 Msa1106860:CDS
TGTCCGTACTCATGCTTCAT+AGG 0.434349 7_3:+47525054 None:intergenic
TGATGAGGCGCCACAGGAAA+AGG 0.435741 7_3:-47526524 Msa1106860:CDS
TGATCTTATGCCTGAGCTTA+CGG 0.436796 7_3:-47526614 Msa1106860:CDS
TGAATTTCATAGTCATCCTT+AGG 0.439232 7_3:+47527258 None:intergenic
AACGATGAAACAAGCCCAAC+TGG 0.441214 7_3:+47525386 None:intergenic
TTTCCTTCATATAAGGTTGA+AGG 0.442299 7_3:+47525179 None:intergenic
TACCATTCTTTCAGGGCTGT+TGG 0.445234 7_3:-47528579 Msa1106860:intron
GTGTGTTTGAGAATTGTTGT+TGG 0.445344 7_3:-47529701 Msa1106860:five_prime_UTR
CTTAAGAATGGTAACAAGTC+AGG 0.449470 7_3:-47526204 Msa1106860:CDS
AAAATAGATGGCAGCCATCC+AGG 0.450256 7_3:-47525934 Msa1106860:CDS
ATACTTACCCTTCCACCATC+GGG 0.451103 7_3:+47526358 None:intergenic
TGCTCAAGTGATCCGAAGGC+TGG 0.453930 7_3:-47525451 Msa1106860:CDS
CGCAAATACAGTTTGGGAGA+AGG 0.454810 7_3:-47528753 Msa1106860:CDS
TTGTTGGAAGAACCAAGTTA+TGG 0.456103 7_3:-47529829 Msa1106860:five_prime_UTR
TCCAGATCTTCTATGACTAT+AGG 0.457765 7_3:+47525871 None:intergenic
CAGTTTCTATCATCTTTCAA+TGG 0.458798 7_3:-47526565 Msa1106860:CDS
ATCAGCCTTTGGGGAGTATG+TGG 0.460271 7_3:-47528881 Msa1106860:CDS
AGGAAAAGGCAGAAAATAGA+TGG 0.461681 7_3:-47525946 Msa1106860:CDS
AATCCTATGAAGCCTATTAG+TGG 0.461782 7_3:-47526496 Msa1106860:CDS
AAGAAGCTGCGCATTTGACT+TGG 0.466646 7_3:-47525911 Msa1106860:CDS
GGGTCAGCTTTCTATGAGAC+TGG 0.466792 7_3:+47525200 None:intergenic
TCTCGTCGCAAATACAGTTT+GGG 0.467945 7_3:-47528759 Msa1106860:CDS
TCAGCCTTTGGGGAGTATGT+GGG 0.473397 7_3:-47528880 Msa1106860:CDS
GACAAAACATATTGGTTATG+TGG 0.475296 7_3:-47527181 Msa1106860:CDS
TCTTAAATTATTAGTGGTGT+CGG 0.476978 7_3:+47525011 None:intergenic
ATGATCAATTGTCTATCTCT+TGG 0.477190 7_3:+47526412 None:intergenic
TGGATAGGATGAAGGAGTTG+AGG 0.477225 7_3:-47526390 Msa1106860:CDS
ATAGAAGATCTGGAATCCTC+AGG 0.479558 7_3:-47525862 Msa1106860:CDS
GAATCAGTTCCCAAGTTCAA+TGG 0.480600 7_3:+47527384 None:intergenic
ATTGTGCGACTTATGACTAA+TGG 0.482112 7_3:-47525097 Msa1106860:three_prime_UTR
TGTTAAAATGACTCAGAGAA+TGG 0.483375 7_3:-47529923 Msa1106860:five_prime_UTR
TACAGGTACCTGAAAGGAAA+AGG 0.483460 7_3:-47525960 Msa1106860:intron
AAAACTCCTTGTGGAAGAAC+AGG 0.485224 7_3:+47527954 None:intergenic
TCTACAAAGCTAGTCAGTCT+TGG 0.487004 7_3:+47524817 None:intergenic
ACTTGGAAAGTGAACTATCA+TGG 0.488551 7_3:-47525894 Msa1106860:CDS
GTTGATTGATGAGGCGCCAC+AGG 0.490522 7_3:-47526530 Msa1106860:CDS
TCAATTTGCATCTGGCATCA+AGG 0.490960 7_3:-47528353 Msa1106860:intron
ATGCCTGAGCTTACGGCCAT+GGG 0.493465 7_3:-47526607 Msa1106860:CDS
TTCCAAAATCCCTTTCAAGA+TGG 0.494487 7_3:+47525422 None:intergenic
ATTATGACCGAGCAACTACT+TGG 0.495159 7_3:-47527048 Msa1106860:CDS
TATGCCTGAGCTTACGGCCA+TGG 0.499536 7_3:-47526608 Msa1106860:CDS
GATGAGTGTCTGTGCTTCAT+AGG 0.501430 7_3:-47524924 Msa1106860:three_prime_UTR
AGATGGTAATGTCCAGCCTT+CGG 0.502070 7_3:+47525439 None:intergenic
GGATAGGATGAAGGAGTTGA+GGG 0.503131 7_3:-47526389 Msa1106860:CDS
AGCTGCAAAAGATGCAGTAA+AGG 0.507015 7_3:+47525233 None:intergenic
AGAATTAAACAAGCTGGTAG+AGG 0.507389 7_3:-47529750 Msa1106860:five_prime_UTR
TCAATTACACAATTGTTGAA+GGG 0.509569 7_3:-47529608 Msa1106860:CDS
AATTGAAGAAGCCACTCATC+CGG 0.511721 7_3:+47528370 None:intergenic
ATTTGTTATTGATGATTGCC+TGG 0.511901 7_3:-47524876 Msa1106860:three_prime_UTR
CAGCCTTTGGGGAGTATGTG+GGG 0.512227 7_3:-47528879 Msa1106860:CDS
AAACCGTTCGAGTACCAGTT+GGG 0.512289 7_3:-47525400 Msa1106860:CDS
AATTCATCCAGAATATCTCT+TGG 0.512402 7_3:-47526800 Msa1106860:CDS
GACCCTTCAACCTTATATGA+AGG 0.514677 7_3:-47525182 Msa1106860:three_prime_UTR
GCACATGATGTACTTAAGAA+TGG 0.515234 7_3:-47526216 Msa1106860:CDS
AGGTTCATACAGAGGTAGCT+AGG 0.516503 7_3:-47529730 Msa1106860:five_prime_UTR
CTGGACATTACCATCTTGAA+AGG 0.517528 7_3:-47525432 Msa1106860:CDS
AACTTATCCCCGATGGTGGA+AGG 0.519781 7_3:-47526366 Msa1106860:CDS
GATTTGTGGCTGAACGGAGC+CGG 0.520965 7_3:+47526684 None:intergenic
ACCGCCTCCAAGTAGTTGCT+CGG 0.521574 7_3:+47527041 None:intergenic
TCTCACTTTGTTGACAATGA+TGG 0.521761 7_3:-47527117 Msa1106860:CDS
TTCCTTCATATAAGGTTGAA+GGG 0.522510 7_3:+47525180 None:intergenic
TCCTCCAGTGTCCGGATGAG+TGG 0.523699 7_3:-47528381 Msa1106860:intron
GCAAATACAGTTTGGGAGAA+GGG 0.529080 7_3:-47528752 Msa1106860:intron
GTGTCGGTGTCAAACACGAC+TGG 0.529878 7_3:-47524961 Msa1106860:three_prime_UTR
AAGAGATAGACAATTGATCA+TGG 0.530468 7_3:-47526410 Msa1106860:CDS
TATCTCTTGGATGCTGTTGT+CGG 0.530560 7_3:-47526787 Msa1106860:CDS
TATATGAGACCTAACACTGT+TGG 0.533358 7_3:+47526726 None:intergenic
TTGTTCGCGCTAGAAAACTT+TGG 0.535137 7_3:+47526472 None:intergenic
ATTGATCATGGATAGGATGA+AGG 0.536115 7_3:-47526398 Msa1106860:CDS
TCCGTTGCATATAGACAGAC+AGG 0.539556 7_3:-47526931 Msa1106860:CDS
AATACTTACCCTTCCACCAT+CGG 0.539762 7_3:+47526357 None:intergenic
GCTGAATTGGACAAAGCGAT+TGG 0.541666 7_3:-47526955 Msa1106860:CDS
GATGTATATTCTTCGAGAGA+AGG 0.545343 7_3:-47528831 Msa1106860:CDS
GACTATGATGAATATGTGTA+TGG 0.545422 7_3:-47530626 Msa1106860:five_prime_UTR
GCAATTTGCTTCATTTAACT+CGG 0.547795 7_3:-47527931 Msa1106860:intron
TTCAGGCTTGTTGATTGATG+AGG 0.547800 7_3:-47526539 Msa1106860:CDS
GTGTAGCATTGATAACCTCT+TGG 0.550518 7_3:-47526252 Msa1106860:CDS
CAGTTTGGAGACACGTCGAA+TGG 0.551121 7_3:-47527093 Msa1106860:CDS
ATAATAGGTTGCTGAAGACC+TGG 0.551304 7_3:-47527469 Msa1106860:intron
CTCAGGGAACATGCTCATAG+AGG 0.551708 7_3:-47525845 Msa1106860:intron
AGTCGTGCGAAAGTAGAAGA+TGG 0.551768 7_3:-47529639 Msa1106860:exon
ACCAGTGAAAATATCCTCAC+AGG 0.552567 7_3:+47528521 None:intergenic
TGAAAATTCATCGTTCCCCA+TGG 0.553208 7_3:+47526591 None:intergenic
AAAGAACTTACATTGGAGAA+AGG 0.554540 7_3:+47529534 None:intergenic
TGGACATTACCATCTTGAAA+GGG 0.555810 7_3:-47525431 Msa1106860:CDS
CTGGTACCTGTTCTTCCACA+AGG 0.556911 7_3:-47527960 Msa1106860:CDS
TTGTCCAATTCAGCCATTGA+GGG 0.558959 7_3:+47526964 None:intergenic
ATGCGCAGCTTCTTCCTGGA+TGG 0.560508 7_3:+47525920 None:intergenic
TCGAAGAATATACATCATCT+GGG 0.561592 7_3:+47528838 None:intergenic
TTTGTCCAATTCAGCCATTG+AGG 0.562528 7_3:+47526963 None:intergenic
CCAAACAAGGTAGAAAAGAT+GGG 0.562660 7_3:+47530732 None:intergenic
GCCTGTCTGTCTATATGCAA+CGG 0.563319 7_3:+47526930 None:intergenic
ATAGACAATTGATCATGGAT+AGG 0.567082 7_3:-47526405 Msa1106860:CDS
GGTTTGAGAATTAAACAAGC+TGG 0.570511 7_3:-47529756 Msa1106860:five_prime_UTR
AGAATTGATTTGTGGCTGAA+CGG 0.572108 7_3:+47526678 None:intergenic
TTGGGCTTGTTTCATCGTTG+AGG 0.572928 7_3:-47525382 Msa1106860:intron
GAAGCAAAATAACCATAACT+TGG 0.575847 7_3:+47529817 None:intergenic
TACATCAACGAGATTTCCTA+AGG 0.576078 7_3:-47527274 Msa1106860:CDS
TCACATAGGATAATTTGTCA+TGG 0.578178 7_3:-47530648 Msa1106860:five_prime_UTR
TTCAGCCATTGAGGGAACAA+TGG 0.578242 7_3:+47526972 None:intergenic
AAGAGCAAATGAAAATGAGA+TGG 0.587644 7_3:-47527220 Msa1106860:CDS
TGAATTGCTTTAAGAAAGTG+TGG 0.589613 7_3:-47524783 Msa1106860:three_prime_UTR
TCCATCCTGTGAAAACCTCT+AGG 0.589748 7_3:+47525266 None:intergenic
ATGACCGAGCAACTACTTGG+AGG 0.590156 7_3:-47527045 Msa1106860:CDS
ATACCTATGAAGCATGAGTA+CGG 0.590992 7_3:-47525057 Msa1106860:three_prime_UTR
ACAATGCCATCAGAGTTTAC+CGG 0.593338 7_3:-47526703 Msa1106860:CDS
ACGGAGCCGGTAAACTCTGA+TGG 0.594101 7_3:+47526697 None:intergenic
TGACACTAGTTTAATTCCTG+AGG 0.594288 7_3:-47528493 Msa1106860:intron
TGGATTTACAGGTACCTGAA+AGG 0.594367 7_3:-47525966 Msa1106860:intron
TATGAAGCACAGACACTCAT+CGG 0.595116 7_3:+47524926 None:intergenic
AGAATGAGTGTTAGTAACTG+TGG 0.598698 7_3:-47524842 Msa1106860:three_prime_UTR
AATTGTACACCATTGAACTT+GGG 0.602071 7_3:-47527393 Msa1106860:CDS
TAGAAGATCTGGAATCCTCA+GGG 0.603059 7_3:-47525861 Msa1106860:CDS
AAAAGTTTCGAGATTCCTGA+AGG 0.603246 7_3:-47526823 Msa1106860:CDS
GCAAATTGCAAAACTCCTTG+TGG 0.603269 7_3:+47527945 None:intergenic
AGCCTTTGGGGAGTATGTGG+GGG 0.607518 7_3:-47528878 Msa1106860:CDS
AAAACCGTTCGAGTACCAGT+TGG 0.607874 7_3:-47525401 Msa1106860:CDS
TTCAGTGTAATCATATGTGT+CGG 0.611838 7_3:-47524977 Msa1106860:three_prime_UTR
AGGGAACTTATCCCCGATGG+TGG 0.613042 7_3:-47526370 Msa1106860:CDS
CAGATGGTATGCAATGAGCA+TGG 0.615053 7_3:-47525489 Msa1106860:CDS
TGAGTGTGGAATATTCACAT+AGG 0.620225 7_3:-47530662 Msa1106860:five_prime_UTR
TGTCGGTGTCAAACACGACT+GGG 0.622360 7_3:-47524960 Msa1106860:three_prime_UTR
ACTTATCCCCGATGGTGGAA+GGG 0.623871 7_3:-47526365 Msa1106860:intron
TTGAGGGAACTTATCCCCGA+TGG 0.624711 7_3:-47526373 Msa1106860:CDS
GGAGACAAAATCAAATCACT+TGG 0.627377 7_3:-47527160 Msa1106860:CDS
ACCGAGCAACTACTTGGAGG+CGG 0.630724 7_3:-47527042 Msa1106860:CDS
AGATTGCTCAAGTGATCCGA+AGG 0.635542 7_3:-47525455 Msa1106860:CDS
GAGTGTCTGTGCTTCATAGG+TGG 0.639150 7_3:-47524921 Msa1106860:three_prime_UTR
TGACATGCACAGGTTCCTAG+AGG 0.640850 7_3:-47525281 Msa1106860:intron
TTGTCAACAAAGTGAGACCA+TGG 0.641800 7_3:+47527123 None:intergenic
TCTACATGAAGTTTCGTCAG+AGG 0.642228 7_3:+47526750 None:intergenic
AAGCCCAACTGGTACTCGAA+CGG 0.642948 7_3:+47525397 None:intergenic
CTCTATGAGCATGTTCCCTG+AGG 0.646774 7_3:+47525846 None:intergenic
GCCTTTGGGGAGTATGTGGG+GGG 0.650953 7_3:-47528877 Msa1106860:CDS
TCCAATTCTAAATCCAAACA+AGG 0.654507 7_3:+47530719 None:intergenic
TGGCAAATTAGCTCTTGCCA+AGG 0.654781 7_3:-47528559 Msa1106860:CDS
GATCATTGATTTCGACAGCA+CGG 0.654925 7_3:-47529880 Msa1106860:five_prime_UTR
GAAACGATTTGCTGATCGTG+AGG 0.656486 7_3:-47526171 Msa1106860:intron
GCTTTACGGTTCGTTCCAAG+AGG 0.657976 7_3:+47526237 None:intergenic
TGGTAGAAGAGATATGGCCA+TGG 0.663999 7_3:-47527140 Msa1106860:CDS
GCTGGTAGAGGTTCATACAG+AGG 0.671315 7_3:-47529738 Msa1106860:five_prime_UTR
CGAAGAATATACATCATCTG+GGG 0.676864 7_3:+47528839 None:intergenic
TGCCTGAGCTTACGGCCATG+GGG 0.687920 7_3:-47526606 Msa1106860:CDS
TACTTACCCTTCCACCATCG+GGG 0.699528 7_3:+47526359 None:intergenic
AGAAAAGTAATCAGCCTTTG+GGG 0.712981 7_3:-47528890 Msa1106860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGATGAAAAATGATAATTA+AGG - chr7_3:47525103-47525122 Msa1106860:three_prime_UTR 15.0%
!! CAAAAATGAAAATTCATATT+TGG + chr7_3:47525299-47525318 None:intergenic 15.0%
!!! CAAATATGAATTTTCATTTT+TGG - chr7_3:47525297-47525316 Msa1106860:intron 15.0%
!!! ACTTTGTTATAATTTTTTGT+TGG - chr7_3:47525760-47525779 Msa1106860:intron 15.0%
!!! AAAATTTAAACGAAGTTTTA+AGG + chr7_3:47526461-47526480 None:intergenic 15.0%
!! TGTATCAAAATAAATAGAAA+TGG + chr7_3:47527314-47527333 None:intergenic 15.0%
!! TTCATATTACATGATATAAT+AGG - chr7_3:47528121-47528140 Msa1106860:intron 15.0%
!!! AAACAAATTTTTATTGAGTG+TGG - chr7_3:47524929-47524948 Msa1106860:three_prime_UTR 20.0%
!!! ATATAGTCAACATTTTATAG+TGG - chr7_3:47525019-47525038 Msa1106860:three_prime_UTR 20.0%
!! AAGGTGATAATTAAAATAGA+TGG - chr7_3:47525122-47525141 Msa1106860:three_prime_UTR 20.0%
!! ACATAATATTTCATGAAGTT+AGG + chr7_3:47525192-47525211 None:intergenic 20.0%
!! TTAAAACTTCAACAAAATCT+TGG + chr7_3:47525380-47525399 None:intergenic 20.0%
!!! ATTTTGTTAAATTGCTTTCT+TGG - chr7_3:47525644-47525663 Msa1106860:intron 20.0%
!! TTAAAATGGTAAATTCTACT+CGG + chr7_3:47526330-47526349 None:intergenic 20.0%
!!! AGAATTTACCATTTTAACTA+TGG - chr7_3:47526333-47526352 Msa1106860:intron 20.0%
!!! TAAATTTTTTCTGCTTTTGT+TGG - chr7_3:47526473-47526492 Msa1106860:CDS 20.0%
!! TAACATACTAAACATGATAA+TGG + chr7_3:47526533-47526552 None:intergenic 20.0%
!! AATAATCAAATTACATGCAT+CGG + chr7_3:47526588-47526607 None:intergenic 20.0%
!! TTTATCACTTATGTGTATTA+TGG - chr7_3:47526964-47526983 Msa1106860:CDS 20.0%
!! ATTTAGTATATTTCAAAGCA+GGG + chr7_3:47527192-47527211 None:intergenic 20.0%
!! TATTTAGTATATTTCAAAGC+AGG + chr7_3:47527193-47527212 None:intergenic 20.0%
!!! TTTATATTTTCATTATGAGC+TGG - chr7_3:47527710-47527729 Msa1106860:intron 20.0%
!!! ATTTGAATTTTTCACAAATG+CGG + chr7_3:47528963-47528982 None:intergenic 20.0%
!! TTTGTGAAAAATTCAAATGT+TGG - chr7_3:47528965-47528984 Msa1106860:intron 20.0%
!! AACAAAAAAAGAGAAAAAGT+AGG - chr7_3:47529151-47529170 Msa1106860:intron 20.0%
!! TAGGTAATAAGAAAAATTCA+AGG - chr7_3:47529170-47529189 Msa1106860:intron 20.0%
!!! ACAATTTCGAAAGTATAAAA+GGG + chr7_3:47529308-47529327 None:intergenic 20.0%
!!! AACAATTTCGAAAGTATAAA+AGG + chr7_3:47529309-47529328 None:intergenic 20.0%
!!! TTATATTAGATTCTAGCTTA+TGG + chr7_3:47529545-47529564 None:intergenic 20.0%
!!! TGGTTTTCTTAAATTATTAG+TGG + chr7_3:47530603-47530622 None:intergenic 20.0%
!! TATGATTACACTGAATTATA+TGG + chr7_3:47530623-47530642 None:intergenic 20.0%
! TTGCTAATGAAAAAAGCTAT+GGG + chr7_3:47524803-47524822 None:intergenic 25.0%
! ATTGCTAATGAAAAAAGCTA+TGG + chr7_3:47524804-47524823 None:intergenic 25.0%
!! TTTGGATTTAGAATTGGATT+TGG - chr7_3:47524891-47524910 Msa1106860:three_prime_UTR 25.0%
! TTATAAGCCAGATATATTCA+TGG - chr7_3:47525245-47525264 Msa1106860:CDS 25.0%
! AATGATACCATGAATATATC+TGG + chr7_3:47525255-47525274 None:intergenic 25.0%
!! CGATATGCATATGTAATTTT+TGG + chr7_3:47525416-47525435 None:intergenic 25.0%
! TATGTTAAGAATCAAGTTCA+AGG + chr7_3:47525546-47525565 None:intergenic 25.0%
! TTCAATTACACAATTGTTGA+AGG - chr7_3:47525996-47526015 Msa1106860:intron 25.0%
! TCAATTACACAATTGTTGAA+GGG - chr7_3:47525997-47526016 Msa1106860:intron 25.0%
!!! TCGGAACATCATTAATTTTT+TGG + chr7_3:47526311-47526330 None:intergenic 25.0%
!!! TCATTGCAGATCTTTTAAAA+AGG - chr7_3:47526381-47526400 Msa1106860:CDS 25.0%
!!! CATTGCAGATCTTTTAAAAA+GGG - chr7_3:47526382-47526401 Msa1106860:CDS 25.0%
! ATAATCAAATTACATGCATC+GGG + chr7_3:47526587-47526606 None:intergenic 25.0%
! ATGTGTTGTATGAAATTTGT+TGG - chr7_3:47526617-47526636 Msa1106860:CDS 25.0%
! ATGGAAATTGGTATGTAATT+TGG + chr7_3:47527498-47527517 None:intergenic 25.0%
!! AATATTTCTGCAAATTACGA+AGG - chr7_3:47527571-47527590 Msa1106860:intron 25.0%
!! ATATTTCTGCAAATTACGAA+GGG - chr7_3:47527572-47527591 Msa1106860:intron 25.0%
! CAAATTGAAGGTAATATGTA+AGG + chr7_3:47527813-47527832 None:intergenic 25.0%
! CTTACATATTACCTTCAATT+TGG - chr7_3:47527811-47527830 Msa1106860:intron 25.0%
!! GATTTCTTCCTTATAGTTTT+CGG - chr7_3:47527836-47527855 Msa1106860:intron 25.0%
!! TGATATTGGTAATAAATTCC+AGG + chr7_3:47528157-47528176 None:intergenic 25.0%
! ATTGAATTTCTCGTTGATAT+TGG + chr7_3:47528171-47528190 None:intergenic 25.0%
! ATTCAATTTCATTCATCGTT+TGG - chr7_3:47528184-47528203 Msa1106860:intron 25.0%
! CGTTGATGTATTTATATTGA+AGG + chr7_3:47528321-47528340 None:intergenic 25.0%
!! ATTTTCATTTGCTCTTTTGA+GGG + chr7_3:47528381-47528400 None:intergenic 25.0%
!! TCATTTGAGACAAAACATAT+TGG - chr7_3:47528416-47528435 Msa1106860:intron 25.0%
!! TCTTCATCTGAGATATATTT+CGG + chr7_3:47528710-47528729 None:intergenic 25.0%
!! TTACGAAAACTAAAGTGTTT+CGG - chr7_3:47529280-47529299 Msa1106860:intron 25.0%
!!! ACTCAACATTTTTTTACAGA+TGG - chr7_3:47530100-47530119 Msa1106860:intron 25.0%
! AACTACATTTCCTTCATATA+AGG + chr7_3:47530436-47530455 None:intergenic 25.0%
! TGACTAATGGTACAAATAAT+TGG - chr7_3:47530521-47530540 Msa1106860:intron 25.0%
! GACTAATGGTACAAATAATT+GGG - chr7_3:47530522-47530541 Msa1106860:intron 25.0%
! TCTTAAATTATTAGTGGTGT+CGG + chr7_3:47530597-47530616 None:intergenic 25.0%
!!! TCATTCTTTTTTACATATCC+AGG + chr7_3:47530750-47530769 None:intergenic 25.0%
TGCTAATGAAAAAAGCTATG+GGG + chr7_3:47524802-47524821 None:intergenic 30.0%
! ACCTTGTTTGGATTTAGAAT+TGG - chr7_3:47524885-47524904 Msa1106860:three_prime_UTR 30.0%
TCCAATTCTAAATCCAAACA+AGG + chr7_3:47524889-47524908 None:intergenic 30.0%
! TCACATAGGATAATTTGTCA+TGG - chr7_3:47524957-47524976 Msa1106860:three_prime_UTR 30.0%
GACTATGATGAATATGTGTA+TGG - chr7_3:47524979-47524998 Msa1106860:three_prime_UTR 30.0%
GTTGTACAGATTTCTTTCTT+TGG - chr7_3:47525080-47525099 Msa1106860:three_prime_UTR 30.0%
!!! CTGTGTTTTTAGTGTATGTT+TGG - chr7_3:47525321-47525340 Msa1106860:intron 30.0%
TGATGAATTTGACGTAATCA+TGG - chr7_3:47525349-47525368 Msa1106860:intron 30.0%
! ATTTTCTGTAGCAATCAAAC+AGG - chr7_3:47525518-47525537 Msa1106860:intron 30.0%
TAAATTGCTTTCTTGGAGTT+TGG - chr7_3:47525651-47525670 Msa1106860:intron 30.0%
TGTTAAAATGACTCAGAGAA+TGG - chr7_3:47525682-47525701 Msa1106860:intron 30.0%
GAAGCAAAATAACCATAACT+TGG + chr7_3:47525791-47525810 None:intergenic 30.0%
TTGCTTCTCATAAGTACAAT+AGG - chr7_3:47525804-47525823 Msa1106860:intron 30.0%
TGCTTCTCATAAGTACAATA+GGG - chr7_3:47525805-47525824 Msa1106860:intron 30.0%
!!! CCAACTCTCTTTTTTATCAT+AGG + chr7_3:47525831-47525850 None:intergenic 30.0%
CCTATGATAAAAAAGAGAGT+TGG - chr7_3:47525828-47525847 Msa1106860:intron 30.0%
AAAGAACTTACATTGGAGAA+AGG + chr7_3:47526074-47526093 None:intergenic 30.0%
AATGGACAAAGAACTTACAT+TGG + chr7_3:47526081-47526100 None:intergenic 30.0%
TAGAAACAGAAGCAAATCAA+TGG + chr7_3:47526099-47526118 None:intergenic 30.0%
TTTCAGTCAGAATTCAAACT+CGG + chr7_3:47526205-47526224 None:intergenic 30.0%
TACACAAGCCATAGTTAAAA+TGG + chr7_3:47526344-47526363 None:intergenic 30.0%
TAATCAAATTACATGCATCG+GGG + chr7_3:47526586-47526605 None:intergenic 30.0%
!! AACACATGTCTGTTTGTTTT+AGG - chr7_3:47526667-47526686 Msa1106860:CDS 30.0%
TCGAAGAATATACATCATCT+GGG + chr7_3:47526770-47526789 None:intergenic 30.0%
TCTTTGTTACCATTCTTTCA+GGG - chr7_3:47527019-47527038 Msa1106860:CDS 30.0%
AAATTCACATCTAGACTATG+TGG + chr7_3:47527160-47527179 None:intergenic 30.0%
!! AGATCTTTACTTGTTGTAGA+AGG + chr7_3:47527286-47527305 None:intergenic 30.0%
!!! CTTTTAAAGTCACACATGAT+CGG + chr7_3:47527377-47527396 None:intergenic 30.0%
TAGTTACGTTAAAAGTCACA+CGG - chr7_3:47527397-47527416 Msa1106860:CDS 30.0%
AACTCATATATATACCGTCA+GGG + chr7_3:47527471-47527490 None:intergenic 30.0%
TAACTCATATATATACCGTC+AGG + chr7_3:47527472-47527491 None:intergenic 30.0%
!! AATTTTTCAGACTATTCTGC+TGG - chr7_3:47527626-47527645 Msa1106860:intron 30.0%
! GCAATTTGCTTCATTTAACT+CGG - chr7_3:47527674-47527693 Msa1106860:intron 30.0%
GAAGAAATCAACCAAATTGA+AGG + chr7_3:47527825-47527844 None:intergenic 30.0%
!! GGCTCTTTGAAATACAAAAA+AGG + chr7_3:47527944-47527963 None:intergenic 30.0%
TAATTGTACACCATTGAACT+TGG - chr7_3:47528211-47528230 Msa1106860:intron 30.0%
AATTGTACACCATTGAACTT+GGG - chr7_3:47528212-47528231 Msa1106860:intron 30.0%
AACTCTATCGCATTATTTGA+TGG - chr7_3:47528262-47528281 Msa1106860:intron 30.0%
TGAATTTCATAGTCATCCTT+AGG + chr7_3:47528350-47528369 None:intergenic 30.0%
! CATTTTCATTTGCTCTTTTG+AGG + chr7_3:47528382-47528401 None:intergenic 30.0%
AAGAGCAAATGAAAATGAGA+TGG - chr7_3:47528385-47528404 Msa1106860:intron 30.0%
! ATGTTTTGTCTCAAATGATG+AGG + chr7_3:47528414-47528433 None:intergenic 30.0%
! GACAAAACATATTGGTTATG+TGG - chr7_3:47528424-47528443 Msa1106860:intron 30.0%
AATTCATCCAGAATATCTCT+TGG - chr7_3:47528805-47528824 Msa1106860:CDS 30.0%
!! CTTTCTTCAGAATTGATTTG+TGG + chr7_3:47528938-47528957 None:intergenic 30.0%
CATTGAAAGATGATAGAAAC+TGG + chr7_3:47529042-47529061 None:intergenic 30.0%
CAGTTTCTATCATCTTTCAA+TGG - chr7_3:47529040-47529059 Msa1106860:intron 30.0%
ATGATCAATTGTCTATCTCT+TGG + chr7_3:47529196-47529215 None:intergenic 30.0%
AAGAGATAGACAATTGATCA+TGG - chr7_3:47529195-47529214 Msa1106860:intron 30.0%
ATAGACAATTGATCATGGAT+AGG - chr7_3:47529200-47529219 Msa1106860:intron 30.0%
ATGCTACACTGTATATCAAT+AGG + chr7_3:47529342-47529361 None:intergenic 30.0%
TAAGTACATCATGTGCTTTA+CGG + chr7_3:47529385-47529404 None:intergenic 30.0%
TATAATCTAAAGACACGAGA+AGG - chr7_3:47529560-47529579 Msa1106860:CDS 30.0%
GTTACGTTTATGTTTGAACT+TGG - chr7_3:47529619-47529638 Msa1106860:CDS 30.0%
ATGTTTGAACTTGGATTTAC+AGG - chr7_3:47529628-47529647 Msa1106860:exon 30.0%
!!! TTTTTTTTGTGTTAACCCTC+CGG + chr7_3:47529914-47529933 None:intergenic 30.0%
TGTAGTAAAAGAGAAAAGCT+AGG + chr7_3:47530025-47530044 None:intergenic 30.0%
! AGCTTTTCTCTTTTACTACA+TGG - chr7_3:47530025-47530044 Msa1106860:intron 30.0%
!!! ATTTTTTCTTTGACATGCAC+AGG - chr7_3:47530314-47530333 Msa1106860:intron 30.0%
TTCCTTCATATAAGGTTGAA+GGG + chr7_3:47530428-47530447 None:intergenic 30.0%
TTTCCTTCATATAAGGTTGA+AGG + chr7_3:47530429-47530448 None:intergenic 30.0%
TTCAGTGTAATCATATGTGT+CGG - chr7_3:47530628-47530647 Msa1106860:five_prime_UTR 30.0%
!! ATTTGTTATTGATGATTGCC+TGG - chr7_3:47530729-47530748 Msa1106860:five_prime_UTR 30.0%
!! TGAATTGCTTTAAGAAAGTG+TGG - chr7_3:47530822-47530841 Msa1106860:five_prime_UTR 30.0%
CTAATGAAAAAAGCTATGGG+GGG + chr7_3:47524800-47524819 None:intergenic 35.0%
GCTAATGAAAAAAGCTATGG+GGG + chr7_3:47524801-47524820 None:intergenic 35.0%
CCAAACAAGGTAGAAAAGAT+GGG + chr7_3:47524876-47524895 None:intergenic 35.0%
TCCAAACAAGGTAGAAAAGA+TGG + chr7_3:47524877-47524896 None:intergenic 35.0%
TGAGTGTGGAATATTCACAT+AGG - chr7_3:47524943-47524962 Msa1106860:three_prime_UTR 35.0%
AGTGGTAAGCTAGCAAAATA+TGG - chr7_3:47525037-47525056 Msa1106860:three_prime_UTR 35.0%
TGAATTTGACGTAATCATGG+TGG - chr7_3:47525352-47525371 Msa1106860:intron 35.0%
GAATCGATTAATGGTGAGTT+TGG + chr7_3:47525447-47525466 None:intergenic 35.0%
TGCATGCTTGAATCGATTAA+TGG + chr7_3:47525456-47525475 None:intergenic 35.0%
!! GTTCTTTGATTTGTTTCTGC+AGG - chr7_3:47525567-47525586 Msa1106860:intron 35.0%
TTGTTGGAAGAACCAAGTTA+TGG - chr7_3:47525776-47525795 Msa1106860:intron 35.0%
GGTTTGAGAATTAAACAAGC+TGG - chr7_3:47525849-47525868 Msa1106860:CDS 35.0%
AGAATTAAACAAGCTGGTAG+AGG - chr7_3:47525855-47525874 Msa1106860:CDS 35.0%
GTGTGTTTGAGAATTGTTGT+TGG - chr7_3:47525904-47525923 Msa1106860:CDS 35.0%
! GCTTTTGTGATACTATGCAA+TGG - chr7_3:47526019-47526038 Msa1106860:intron 35.0%
GTGACATCATTAAGATCGAA+TGG - chr7_3:47526168-47526187 Msa1106860:intron 35.0%
ATTCTGACTGAAACAATCCT+TGG - chr7_3:47526212-47526231 Msa1106860:CDS 35.0%
!!! CTTAACCCTCTAGTTTTCAT+GGG + chr7_3:47526287-47526306 None:intergenic 35.0%
!!! TCTTAACCCTCTAGTTTTCA+TGG + chr7_3:47526288-47526307 None:intergenic 35.0%
AATCAAATTACATGCATCGG+GGG + chr7_3:47526585-47526604 None:intergenic 35.0%
!!! TTTGTTTTAGGACTTTGACC+TGG - chr7_3:47526679-47526698 Msa1106860:CDS 35.0%
!!! TTGTTTTAGGACTTTGACCT+GGG - chr7_3:47526680-47526699 Msa1106860:CDS 35.0%
CAGAAAAGTAATCAGCCTTT+GGG - chr7_3:47526714-47526733 Msa1106860:CDS 35.0%
AGAAAAGTAATCAGCCTTTG+GGG - chr7_3:47526715-47526734 Msa1106860:CDS 35.0%
CGAAGAATATACATCATCTG+GGG + chr7_3:47526769-47526788 None:intergenic 35.0%
CTCGAAGAATATACATCATC+TGG + chr7_3:47526771-47526790 None:intergenic 35.0%
GATGTATATTCTTCGAGAGA+AGG - chr7_3:47526774-47526793 Msa1106860:CDS 35.0%
CTCTTTGTTACCATTCTTTC+AGG - chr7_3:47527018-47527037 Msa1106860:CDS 35.0%
! TCTTGCCAAGGAACATTTTT+GGG - chr7_3:47527058-47527077 Msa1106860:CDS 35.0%
! TGACACTAGTTTAATTCCTG+AGG - chr7_3:47527112-47527131 Msa1106860:CDS 35.0%
AATGTATAGAATCTCACCTC+AGG + chr7_3:47527131-47527150 None:intergenic 35.0%
TAGTATATTTCAAAGCAGGG+TGG + chr7_3:47527189-47527208 None:intergenic 35.0%
GTAAACAATCTTTACCCTGA+CGG - chr7_3:47527454-47527473 Msa1106860:CDS 35.0%
CACTTGGTAAACATGGAAAT+TGG + chr7_3:47527510-47527529 None:intergenic 35.0%
TTGTAAGCTCAACTGAGATT+AGG - chr7_3:47527536-47527555 Msa1106860:intron 35.0%
! TTTTCGCACCGAAAACTATA+AGG + chr7_3:47527847-47527866 None:intergenic 35.0%
!! ATAGTTTTCGGTGCGAAAAT+TGG - chr7_3:47527848-47527867 Msa1106860:intron 35.0%
TTGTATTTCAAAGAGCCTTG+CGG - chr7_3:47527947-47527966 Msa1106860:CDS 35.0%
TCGGATAATAAAAGATTGCG+GGG + chr7_3:47528042-47528061 None:intergenic 35.0%
GTCGGATAATAAAAGATTGC+GGG + chr7_3:47528043-47528062 None:intergenic 35.0%
GGTCGGATAATAAAAGATTG+CGG + chr7_3:47528044-47528063 None:intergenic 35.0%
TACATCAACGAGATTTCCTA+AGG - chr7_3:47528331-47528350 Msa1106860:intron 35.0%
GGAGACAAAATCAAATCACT+TGG - chr7_3:47528445-47528464 Msa1106860:intron 35.0%
ATCACTTGGTAGAAGAGATA+TGG - chr7_3:47528459-47528478 Msa1106860:intron 35.0%
TCTCACTTTGTTGACAATGA+TGG - chr7_3:47528488-47528507 Msa1106860:intron 35.0%
ATGTCCAATAAAAAGCAGCA+TGG - chr7_3:47528752-47528771 Msa1106860:intron 35.0%
!!! ATGACCATGCTGCTTTTTAT+TGG + chr7_3:47528759-47528778 None:intergenic 35.0%
AAAAGTTTCGAGATTCCTGA+AGG - chr7_3:47528782-47528801 Msa1106860:CDS 35.0%
TATTCTGGATGAATTCCTTC+AGG + chr7_3:47528800-47528819 None:intergenic 35.0%
TATATGAGACCTAACACTGT+TGG + chr7_3:47528882-47528901 None:intergenic 35.0%
!! AGAATTGATTTGTGGCTGAA+CGG + chr7_3:47528930-47528949 None:intergenic 35.0%
TCATCTTTCAATGGCAATTC+AGG - chr7_3:47529049-47529068 Msa1106860:intron 35.0%
! GGATTATTAACCTTTTCCTG+TGG + chr7_3:47529094-47529113 None:intergenic 35.0%
AATCCTATGAAGCCTATTAG+TGG - chr7_3:47529109-47529128 Msa1106860:intron 35.0%
GAAAACTTTGGTCCACTAAT+AGG + chr7_3:47529124-47529143 None:intergenic 35.0%
ATTGATCATGGATAGGATGA+AGG - chr7_3:47529207-47529226 Msa1106860:intron 35.0%
GCACATGATGTACTTAAGAA+TGG - chr7_3:47529389-47529408 Msa1106860:intron 35.0%
CTTAAGAATGGTAACAAGTC+AGG - chr7_3:47529401-47529420 Msa1106860:intron 35.0%
! ATTTTCTGCCTTTTCCTTTC+AGG + chr7_3:47529656-47529675 None:intergenic 35.0%
AGGAAAAGGCAGAAAATAGA+TGG - chr7_3:47529659-47529678 Msa1106860:five_prime_UTR 35.0%
ACTTGGAAAGTGAACTATCA+TGG - chr7_3:47529711-47529730 Msa1106860:five_prime_UTR 35.0%
TCCAGATCTTCTATGACTAT+AGG + chr7_3:47529737-47529756 None:intergenic 35.0%
AAGTCTTTCTTTCTGTGGAA+TGG + chr7_3:47529829-47529848 None:intergenic 35.0%
TTCACAAGTCTTTCTTTCTG+TGG + chr7_3:47529834-47529853 None:intergenic 35.0%
! GGTATTGAAGAGGTCTATTA+TGG + chr7_3:47529986-47530005 None:intergenic 35.0%
TGGACATTACCATCTTGAAA+GGG - chr7_3:47530174-47530193 Msa1106860:intron 35.0%
! TACCATCTTGAAAGGGATTT+TGG - chr7_3:47530181-47530200 Msa1106860:intron 35.0%
TTCCAAAATCCCTTTCAAGA+TGG + chr7_3:47530186-47530205 None:intergenic 35.0%
ATTGTGCGACTTATGACTAA+TGG - chr7_3:47530508-47530527 Msa1106860:intron 35.0%
ATACCTATGAAGCATGAGTA+CGG - chr7_3:47530548-47530567 Msa1106860:intron 35.0%
AGAATGAGTGTTAGTAACTG+TGG - chr7_3:47530763-47530782 Msa1106860:five_prime_UTR 35.0%
! CCCATCTTTTCTACCTTGTT+TGG - chr7_3:47524873-47524892 Msa1106860:three_prime_UTR 40.0%
CATGGTATCATTCAGCTGAA+AGG - chr7_3:47525263-47525282 Msa1106860:CDS 40.0%
!! GATCATTGATTTCGACAGCA+CGG - chr7_3:47525725-47525744 Msa1106860:intron 40.0%
! CTACTTTCGCACGACTTTTT+CGG + chr7_3:47525962-47525981 None:intergenic 40.0%
! AATGGCACTATGCTGTCTTT+TGG - chr7_3:47526037-47526056 Msa1106860:intron 40.0%
AGGTAAGTAAAGTCAGACCA+AGG + chr7_3:47526232-47526251 None:intergenic 40.0%
TCCTTTCCCATGAAAACTAG+AGG - chr7_3:47526278-47526297 Msa1106860:intron 40.0%
CCTTTCCCATGAAAACTAGA+GGG - chr7_3:47526279-47526298 Msa1106860:intron 40.0%
!! TTTCTGGTAAGCATTTTCCC+AGG + chr7_3:47526700-47526719 None:intergenic 40.0%
!! CCAAAGGCTGATTACTTTTC+TGG + chr7_3:47526716-47526735 None:intergenic 40.0%
CCAGAAAAGTAATCAGCCTT+TGG - chr7_3:47526713-47526732 Msa1106860:CDS 40.0%
AGAGAAGGAACTGATGATTC+AGG - chr7_3:47526789-47526808 Msa1106860:CDS 40.0%
TCTCGTCGCAAATACAGTTT+GGG - chr7_3:47526846-47526865 Msa1106860:CDS 40.0%
GCAAATACAGTTTGGGAGAA+GGG - chr7_3:47526853-47526872 Msa1106860:CDS 40.0%
! CTCTTGCCAAGGAACATTTT+TGG - chr7_3:47527057-47527076 Msa1106860:CDS 40.0%
GGAAACCCAAAAATGTTCCT+TGG + chr7_3:47527066-47527085 None:intergenic 40.0%
!!! ACATTTTTGGGTTTCCTGTG+AGG - chr7_3:47527070-47527089 Msa1106860:CDS 40.0%
! TCCTGTGAGGATATTTTCAC+TGG - chr7_3:47527083-47527102 Msa1106860:CDS 40.0%
ACCAGTGAAAATATCCTCAC+AGG + chr7_3:47527087-47527106 None:intergenic 40.0%
AATTGAAGAAGCCACTCATC+CGG + chr7_3:47527238-47527257 None:intergenic 40.0%
TGGCTTCTTCAATTTGCATC+TGG - chr7_3:47527244-47527263 Msa1106860:CDS 40.0%
TCAATTTGCATCTGGCATCA+AGG - chr7_3:47527252-47527271 Msa1106860:CDS 40.0%
ATCTCAGTTGAGCTTACAAC+TGG + chr7_3:47527535-47527554 None:intergenic 40.0%
AAAACTCCTTGTGGAAGAAC+AGG + chr7_3:47527654-47527673 None:intergenic 40.0%
GCAAATTGCAAAACTCCTTG+TGG + chr7_3:47527663-47527682 None:intergenic 40.0%
! CTTTGTCGATGCAAAAGTGT+TGG - chr7_3:47527886-47527905 Msa1106860:intron 40.0%
!! CTAAATGCAGAGGAGTATTG+CGG - chr7_3:47527985-47528004 Msa1106860:intron 40.0%
!! TAAATGCAGAGGAGTATTGC+GGG - chr7_3:47527986-47528005 Msa1106860:intron 40.0%
TATTATCCGACCTGCAGTTA+CGG - chr7_3:47528052-47528071 Msa1106860:intron 40.0%
TTGTTATAACCCGTAACTGC+AGG + chr7_3:47528065-47528084 None:intergenic 40.0%
ATAATAGGTTGCTGAAGACC+TGG - chr7_3:47528136-47528155 Msa1106860:intron 40.0%
GAATCAGTTCCCAAGTTCAA+TGG + chr7_3:47528224-47528243 None:intergenic 40.0%
! TGGGAACTGATTCTCAAGAT+TGG - chr7_3:47528231-47528250 Msa1106860:intron 40.0%
TTGTCAACAAAGTGAGACCA+TGG + chr7_3:47528485-47528504 None:intergenic 40.0%
!! GTTGACAATGATGGACAGTT+TGG - chr7_3:47528497-47528516 Msa1106860:CDS 40.0%
ATTATGACCGAGCAACTACT+TGG - chr7_3:47528557-47528576 Msa1106860:CDS 40.0%
TTGTCCAATTCAGCCATTGA+GGG + chr7_3:47528644-47528663 None:intergenic 40.0%
TTTGTCCAATTCAGCCATTG+AGG + chr7_3:47528645-47528664 None:intergenic 40.0%
ACAGCATCCAAGAGATATTC+TGG + chr7_3:47528815-47528834 None:intergenic 40.0%
TATCTCTTGGATGCTGTTGT+CGG - chr7_3:47528818-47528837 Msa1106860:CDS 40.0%
TCTACATGAAGTTTCGTCAG+AGG + chr7_3:47528858-47528877 None:intergenic 40.0%
CATGTAGATCCAACAGTGTT+AGG - chr7_3:47528870-47528889 Msa1106860:CDS 40.0%
ACAATGCCATCAGAGTTTAC+CGG - chr7_3:47528902-47528921 Msa1106860:CDS 40.0%
TGATCTTATGCCTGAGCTTA+CGG - chr7_3:47528991-47529010 Msa1106860:intron 40.0%
TGAAAATTCATCGTTCCCCA+TGG + chr7_3:47529017-47529036 None:intergenic 40.0%
!! TTCAGGCTTGTTGATTGATG+AGG - chr7_3:47529066-47529085 Msa1106860:intron 40.0%
TTGTTCGCGCTAGAAAACTT+TGG + chr7_3:47529136-47529155 None:intergenic 40.0%
AATACTTACCCTTCCACCAT+CGG + chr7_3:47529251-47529270 None:intergenic 40.0%
!! GTGTAGCATTGATAACCTCT+TGG - chr7_3:47529353-47529372 Msa1106860:intron 40.0%
TGGATTTACAGGTACCTGAA+AGG - chr7_3:47529639-47529658 Msa1106860:exon 40.0%
TACAGGTACCTGAAAGGAAA+AGG - chr7_3:47529645-47529664 Msa1106860:five_prime_UTR 40.0%
GCCTATAGTCATAGAAGATC+TGG - chr7_3:47529733-47529752 Msa1106860:five_prime_UTR 40.0%
AAGACTTGTGAAATGCCAGA+TGG - chr7_3:47529842-47529861 Msa1106860:five_prime_UTR 40.0%
! AATGCTCTCTGGTATTGAAG+AGG + chr7_3:47529996-47530015 None:intergenic 40.0%
! CAATGAGCATGGACTTTTCT+TGG - chr7_3:47530127-47530146 Msa1106860:intron 40.0%
CTGGACATTACCATCTTGAA+AGG - chr7_3:47530173-47530192 Msa1106860:intron 40.0%
AGCTGCAAAAGATGCAGTAA+AGG + chr7_3:47530375-47530394 None:intergenic 40.0%
GACCCTTCAACCTTATATGA+AGG - chr7_3:47530423-47530442 Msa1106860:intron 40.0%
TATGAAGCACAGACACTCAT+CGG + chr7_3:47530682-47530701 None:intergenic 40.0%
TCTACAAAGCTAGTCAGTCT+TGG + chr7_3:47530791-47530810 None:intergenic 40.0%
ATGGAAACTGTGAGCACTTC+TGG - chr7_3:47525701-47525720 Msa1106860:intron 45.0%
AGGTTCATACAGAGGTAGCT+AGG - chr7_3:47525875-47525894 Msa1106860:CDS 45.0%
AGTCGTGCGAAAGTAGAAGA+TGG - chr7_3:47525966-47525985 Msa1106860:intron 45.0%
CTTCATATGCTGCGTTTCGT+AGG - chr7_3:47526120-47526139 Msa1106860:intron 45.0%
GTCCGAACTGCAGATTACTA+GGG - chr7_3:47526255-47526274 Msa1106860:intron 45.0%
GACCCTAGTAATCTGCAGTT+CGG + chr7_3:47526260-47526279 None:intergenic 45.0%
!!! CCCTCTAGTTTTCATGGGAA+AGG + chr7_3:47526282-47526301 None:intergenic 45.0%
GTCTCGTCGCAAATACAGTT+TGG - chr7_3:47526845-47526864 Msa1106860:CDS 45.0%
CGCAAATACAGTTTGGGAGA+AGG - chr7_3:47526852-47526871 Msa1106860:CDS 45.0%
TACCATTCTTTCAGGGCTGT+TGG - chr7_3:47527026-47527045 Msa1106860:CDS 45.0%
! TGGCAAATTAGCTCTTGCCA+AGG - chr7_3:47527046-47527065 Msa1106860:CDS 45.0%
ACTGGCACACTTGGTAAACA+TGG + chr7_3:47527517-47527536 None:intergenic 45.0%
CTCACACACACTAAATGCAG+AGG - chr7_3:47527975-47527994 Msa1106860:intron 45.0%
ATTATCCGACCTGCAGTTAC+GGG - chr7_3:47528053-47528072 Msa1106860:intron 45.0%
TATAACCCGTAACTGCAGGT+CGG + chr7_3:47528061-47528080 None:intergenic 45.0%
TGGTAGAAGAGATATGGCCA+TGG - chr7_3:47528465-47528484 Msa1106860:intron 45.0%
CTTCTCCATTGTTCCCTCAA+TGG - chr7_3:47528628-47528647 Msa1106860:intron 45.0%
TTCAGCCATTGAGGGAACAA+TGG + chr7_3:47528636-47528655 None:intergenic 45.0%
TGTTCCCTCAATGGCTGAAT+TGG - chr7_3:47528637-47528656 Msa1106860:intron 45.0%
GCTGAATTGGACAAAGCGAT+TGG - chr7_3:47528650-47528669 Msa1106860:intron 45.0%
TCCGTTGCATATAGACAGAC+AGG - chr7_3:47528674-47528693 Msa1106860:intron 45.0%
GCCTGTCTGTCTATATGCAA+CGG + chr7_3:47528678-47528697 None:intergenic 45.0%
GGTCCACTAATAGGCTTCAT+AGG + chr7_3:47529115-47529134 None:intergenic 45.0%
TGGATAGGATGAAGGAGTTG+AGG - chr7_3:47529215-47529234 Msa1106860:intron 45.0%
GGATAGGATGAAGGAGTTGA+GGG - chr7_3:47529216-47529235 Msa1106860:intron 45.0%
ATACTTACCCTTCCACCATC+GGG + chr7_3:47529250-47529269 None:intergenic 45.0%
!! GAAACGATTTGCTGATCGTG+AGG - chr7_3:47529434-47529453 Msa1106860:intron 45.0%
AAAATAGATGGCAGCCATCC+AGG - chr7_3:47529671-47529690 Msa1106860:five_prime_UTR 45.0%
AAGAAGCTGCGCATTTGACT+TGG - chr7_3:47529694-47529713 Msa1106860:five_prime_UTR 45.0%
TGACCGTCTTCAGTACTAGA+AGG - chr7_3:47529802-47529821 Msa1106860:five_prime_UTR 45.0%
! GGACCTTCTAGTACTGAAGA+CGG + chr7_3:47529808-47529827 None:intergenic 45.0%
GAAATGCCAGATGGCATTCA+TGG - chr7_3:47529851-47529870 Msa1106860:five_prime_UTR 45.0%
! GGCTCTGATAATTCGGAGTT+TGG + chr7_3:47529877-47529896 None:intergenic 45.0%
CTAGGAGTTAGAATGCTCTC+TGG + chr7_3:47530007-47530026 None:intergenic 45.0%
CAGATGGTATGCAATGAGCA+TGG - chr7_3:47530116-47530135 Msa1106860:intron 45.0%
AGATTGCTCAAGTGATCCGA+AGG - chr7_3:47530150-47530169 Msa1106860:intron 45.0%
! AGATGGTAATGTCCAGCCTT+CGG + chr7_3:47530169-47530188 None:intergenic 45.0%
AAAACCGTTCGAGTACCAGT+TGG - chr7_3:47530204-47530223 Msa1106860:intron 45.0%
AAACCGTTCGAGTACCAGTT+GGG - chr7_3:47530205-47530224 Msa1106860:intron 45.0%
AACGATGAAACAAGCCCAAC+TGG + chr7_3:47530222-47530241 None:intergenic 45.0%
! TTGGGCTTGTTTCATCGTTG+AGG - chr7_3:47530223-47530242 Msa1106860:intron 45.0%
! AGGTTCCTAGAGGTTTTCAC+AGG - chr7_3:47530334-47530353 Msa1106860:intron 45.0%
! TCCTAGAGGTTTTCACAGGA+TGG - chr7_3:47530338-47530357 Msa1106860:intron 45.0%
TCCATCCTGTGAAAACCTCT+AGG + chr7_3:47530342-47530361 None:intergenic 45.0%
TGTCCGTACTCATGCTTCAT+AGG + chr7_3:47530554-47530573 None:intergenic 45.0%
GATGAGTGTCTGTGCTTCAT+AGG - chr7_3:47530681-47530700 Msa1106860:five_prime_UTR 45.0%
GCTGGTAGAGGTTCATACAG+AGG - chr7_3:47525867-47525886 Msa1106860:CDS 50.0%
TAATCTGCAGTTCGGACGAG+AGG + chr7_3:47526252-47526271 None:intergenic 50.0%
CGTCCGAACTGCAGATTACT+AGG - chr7_3:47526254-47526273 Msa1106860:CDS 50.0%
! ATCAGCCTTTGGGGAGTATG+TGG - chr7_3:47526724-47526743 Msa1106860:CDS 50.0%
! TCAGCCTTTGGGGAGTATGT+GGG - chr7_3:47526725-47526744 Msa1106860:CDS 50.0%
TGCCAACAGCCCTGAAAGAA+TGG + chr7_3:47527031-47527050 None:intergenic 50.0%
GAGCTTACAACTGGCACACT+TGG + chr7_3:47527526-47527545 None:intergenic 50.0%
CTGGTACCTGTTCTTCCACA+AGG - chr7_3:47527645-47527664 Msa1106860:intron 50.0%
CAGTTTGGAGACACGTCGAA+TGG - chr7_3:47528512-47528531 Msa1106860:CDS 50.0%
ATGACCGAGCAACTACTTGG+AGG - chr7_3:47528560-47528579 Msa1106860:CDS 50.0%
TTGAGGGAACTTATCCCCGA+TGG - chr7_3:47529232-47529251 Msa1106860:intron 50.0%
!! AACTTATCCCCGATGGTGGA+AGG - chr7_3:47529239-47529258 Msa1106860:intron 50.0%
!! ACTTATCCCCGATGGTGGAA+GGG - chr7_3:47529240-47529259 Msa1106860:intron 50.0%
TACTTACCCTTCCACCATCG+GGG + chr7_3:47529249-47529268 None:intergenic 50.0%
GCTTTACGGTTCGTTCCAAG+AGG + chr7_3:47529371-47529390 None:intergenic 50.0%
TCAAATGCGCAGCTTCTTCC+TGG + chr7_3:47529692-47529711 None:intergenic 50.0%
GTTTGGCCATGAATGCCATC+TGG + chr7_3:47529860-47529879 None:intergenic 50.0%
! GGAAGGGGGCTCTGATAATT+CGG + chr7_3:47529884-47529903 None:intergenic 50.0%
AAGCCCAACTGGTACTCGAA+CGG + chr7_3:47530211-47530230 None:intergenic 50.0%
TGACATGCACAGGTTCCTAG+AGG - chr7_3:47530324-47530343 Msa1106860:intron 50.0%
GGGTCAGCTTTCTATGAGAC+TGG + chr7_3:47530408-47530427 None:intergenic 50.0%
!! TGTCGGTGTCAAACACGACT+GGG - chr7_3:47530645-47530664 Msa1106860:five_prime_UTR 50.0%
GAGTGTCTGTGCTTCATAGG+TGG - chr7_3:47530684-47530703 Msa1106860:five_prime_UTR 50.0%
! CAGCCTTTGGGGAGTATGTG+GGG - chr7_3:47526726-47526745 Msa1106860:CDS 55.0%
! AGCCTTTGGGGAGTATGTGG+GGG - chr7_3:47526727-47526746 Msa1106860:CDS 55.0%
GCATCTCTTCCTCCAGTGTC+CGG - chr7_3:47527216-47527235 Msa1106860:CDS 55.0%
TGTGTGTGAGTTTCGCCGCA+AGG + chr7_3:47527965-47527984 None:intergenic 55.0%
ACATTTGATGTGCTGGGGCG+GGG + chr7_3:47528019-47528038 None:intergenic 55.0%
GACATTTGATGTGCTGGGGC+GGG + chr7_3:47528020-47528039 None:intergenic 55.0%
GGACATTTGATGTGCTGGGG+CGG + chr7_3:47528021-47528040 None:intergenic 55.0%
CGGGGACATTTGATGTGCTG+GGG + chr7_3:47528024-47528043 None:intergenic 55.0%
GCGGGGACATTTGATGTGCT+GGG + chr7_3:47528025-47528044 None:intergenic 55.0%
TGCGGGGACATTTGATGTGC+TGG + chr7_3:47528026-47528045 None:intergenic 55.0%
ACCGAGCAACTACTTGGAGG+CGG - chr7_3:47528563-47528582 Msa1106860:CDS 55.0%
ACCGCCTCCAAGTAGTTGCT+CGG + chr7_3:47528567-47528586 None:intergenic 55.0%
ACGGAGCCGGTAAACTCTGA+TGG + chr7_3:47528911-47528930 None:intergenic 55.0%
GATTTGTGGCTGAACGGAGC+CGG + chr7_3:47528924-47528943 None:intergenic 55.0%
TATGCCTGAGCTTACGGCCA+TGG - chr7_3:47528997-47529016 Msa1106860:intron 55.0%
ATGCCTGAGCTTACGGCCAT+GGG - chr7_3:47528998-47529017 Msa1106860:intron 55.0%
! GTTGATTGATGAGGCGCCAC+AGG - chr7_3:47529075-47529094 Msa1106860:intron 55.0%
! TGATGAGGCGCCACAGGAAA+AGG - chr7_3:47529081-47529100 Msa1106860:intron 55.0%
AGGGAACTTATCCCCGATGG+TGG - chr7_3:47529235-47529254 Msa1106860:intron 55.0%
ATGCGCAGCTTCTTCCTGGA+TGG + chr7_3:47529688-47529707 None:intergenic 55.0%
TGTTAACCCTCCGGTTCCAG+GGG + chr7_3:47529905-47529924 None:intergenic 55.0%
GTGTTAACCCTCCGGTTCCA+GGG + chr7_3:47529906-47529925 None:intergenic 55.0%
TGTGTTAACCCTCCGGTTCC+AGG + chr7_3:47529907-47529926 None:intergenic 55.0%
TGCTCAAGTGATCCGAAGGC+TGG - chr7_3:47530154-47530173 Msa1106860:intron 55.0%
!! GTGTCGGTGTCAAACACGAC+TGG - chr7_3:47530644-47530663 Msa1106860:five_prime_UTR 55.0%
! GCCTTTGGGGAGTATGTGGG+GGG - chr7_3:47526728-47526747 Msa1106860:CDS 60.0%
TCCCCCCACATACTCCCCAA+AGG + chr7_3:47526732-47526751 None:intergenic 60.0%
TCCTCCAGTGTCCGGATGAG+TGG - chr7_3:47527224-47527243 Msa1106860:CDS 60.0%
GAAGCCACTCATCCGGACAC+TGG + chr7_3:47527231-47527250 None:intergenic 60.0%
CATTTGATGTGCTGGGGCGG+GGG + chr7_3:47528018-47528037 None:intergenic 60.0%
TGCCTGAGCTTACGGCCATG+GGG - chr7_3:47528999-47529018 Msa1106860:intron 60.0%
TTCCCCATGGCCGTAAGCTC+AGG + chr7_3:47529004-47529023 None:intergenic 60.0%
TTATCAGAGCCCCCTTCCCC+TGG - chr7_3:47529886-47529905 Msa1106860:five_prime_UTR 60.0%
GCCACTCATCCGGACACTGG+AGG + chr7_3:47527228-47527247 None:intergenic 65.0%
ACCCTCCGGTTCCAGGGGAA+GGG + chr7_3:47529900-47529919 None:intergenic 65.0%
AACCCTCCGGTTCCAGGGGA+AGG + chr7_3:47529901-47529920 None:intergenic 65.0%
GAGCCCCCTTCCCCTGGAAC+CGG - chr7_3:47529892-47529911 Msa1106860:five_prime_UTR 70.0%
CCTCCGGTTCCAGGGGAAGG+GGG + chr7_3:47529898-47529917 None:intergenic 70.0%
CCCTCCGGTTCCAGGGGAAG+GGG + chr7_3:47529899-47529918 None:intergenic 70.0%
CCCCTTCCCCTGGAACCGGA+GGG - chr7_3:47529896-47529915 Msa1106860:five_prime_UTR 70.0%
CCCCCTTCCCCTGGAACCGG+AGG - chr7_3:47529895-47529914 Msa1106860:five_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 47524762 47530865 47524762 ID=Msa1106860;Name=Msa1106860
chr7_3 mRNA 47524762 47530865 47524762 ID=Msa1106860-mRNA-1;Parent=Msa1106860;Name=Msa1106860-mRNA-1;_AED=0.07;_eAED=0.07;_QI=675|1|1|1|0.9|0.81|11|449|679
chr7_3 exon 47524762 47525291 47524762 ID=Msa1106860-mRNA-1:exon:9713;Parent=Msa1106860-mRNA-1
chr7_3 exon 47525383 47525508 47525383 ID=Msa1106860-mRNA-1:exon:9712;Parent=Msa1106860-mRNA-1
chr7_3 exon 47525846 47525977 47525846 ID=Msa1106860-mRNA-1:exon:9711;Parent=Msa1106860-mRNA-1
chr7_3 exon 47526172 47526273 47526172 ID=Msa1106860-mRNA-1:exon:9710;Parent=Msa1106860-mRNA-1
chr7_3 exon 47526366 47527484 47526366 ID=Msa1106860-mRNA-1:exon:9709;Parent=Msa1106860-mRNA-1
chr7_3 exon 47527932 47527991 47527932 ID=Msa1106860-mRNA-1:exon:9708;Parent=Msa1106860-mRNA-1
chr7_3 exon 47528354 47528395 47528354 ID=Msa1106860-mRNA-1:exon:9707;Parent=Msa1106860-mRNA-1
chr7_3 exon 47528494 47528587 47528494 ID=Msa1106860-mRNA-1:exon:9706;Parent=Msa1106860-mRNA-1
chr7_3 exon 47528753 47528938 47528753 ID=Msa1106860-mRNA-1:exon:9705;Parent=Msa1106860-mRNA-1
chr7_3 exon 47529545 47530038 47529545 ID=Msa1106860-mRNA-1:exon:9704;Parent=Msa1106860-mRNA-1
chr7_3 exon 47530587 47530865 47530587 ID=Msa1106860-mRNA-1:exon:9703;Parent=Msa1106860-mRNA-1
chr7_3 five_prime_UTR 47530587 47530865 47530587 ID=Msa1106860-mRNA-1:five_prime_utr;Parent=Msa1106860-mRNA-1
chr7_3 five_prime_UTR 47529643 47530038 47529643 ID=Msa1106860-mRNA-1:five_prime_utr;Parent=Msa1106860-mRNA-1
chr7_3 CDS 47529545 47529642 47529545 ID=Msa1106860-mRNA-1:cds;Parent=Msa1106860-mRNA-1
chr7_3 CDS 47528753 47528938 47528753 ID=Msa1106860-mRNA-1:cds;Parent=Msa1106860-mRNA-1
chr7_3 CDS 47528494 47528587 47528494 ID=Msa1106860-mRNA-1:cds;Parent=Msa1106860-mRNA-1
chr7_3 CDS 47528354 47528395 47528354 ID=Msa1106860-mRNA-1:cds;Parent=Msa1106860-mRNA-1
chr7_3 CDS 47527932 47527991 47527932 ID=Msa1106860-mRNA-1:cds;Parent=Msa1106860-mRNA-1
chr7_3 CDS 47526366 47527484 47526366 ID=Msa1106860-mRNA-1:cds;Parent=Msa1106860-mRNA-1
chr7_3 CDS 47526172 47526273 47526172 ID=Msa1106860-mRNA-1:cds;Parent=Msa1106860-mRNA-1
chr7_3 CDS 47525846 47525977 47525846 ID=Msa1106860-mRNA-1:cds;Parent=Msa1106860-mRNA-1
chr7_3 CDS 47525383 47525508 47525383 ID=Msa1106860-mRNA-1:cds;Parent=Msa1106860-mRNA-1
chr7_3 CDS 47525211 47525291 47525211 ID=Msa1106860-mRNA-1:cds;Parent=Msa1106860-mRNA-1
chr7_3 three_prime_UTR 47524762 47525210 47524762 ID=Msa1106860-mRNA-1:three_prime_utr;Parent=Msa1106860-mRNA-1
Gene Sequence

>Msa1106860

ATGGAAGCTACTTCAATTACACAATTGTTGAAGGGCTTTTGTGATACTATGCAATGGCACTATGCTGTCTTTTGGAAGCTTAATCACCTTTCTCCAATGACTTTGACCTGGGAAAATGCTTACCAGAAAAGTAATCAGCCTTTGGGGAGTATGTGGGGGGACATCAGTTTCGAATCCCCAGATGATGTATATTCTTCGAGAGAAGGAACTGATGATTCAGGAGATTATTCAGTTCGACTTCACATGATCGAAATGTCTCGTCGCAAATACAGTTTGGGAGAAGGGGCTGTTGGCAAATTAGCTCTTGCCAAGGAACATTTTTGGGTTTCCTGTGAGGATATTTTCACTGGTAAATTTGACACTAGTTTAATTCCTGAGTGTCCGGATGAGTGGCTTCTTCAATTTGCATCTGGCATCAAGACTATTCTGCTGGTACCTGTTCTTCCACAAGGAGTTTTGCAATTTGCTTCATTTAACTCGGTTGCTGAAGACCTGGAATTTATTACCAATATCAACGAGAAATTCAATTTCATTCATCGTTTGGAAGCTAATTGTACACCATTGAACTTGGGAACTGATTCTCAAGATTGGTCATTCTCAACTCTATCGCATTATTTGATGGATAGCTTTGAAGAATCGTCTTCAGCTAGTACTTCCTTCAATATAAATACATCAACGAGATTTCCTAAGGATGACTATGAAATTCAGCTAAAATCCCTCAAAAGAGCAAATGAAAATGAGATGGTTTCCTCATCATTTGAGACAAAACATATTGGTTATGTGGAGACAAAATCAAATCACTTGGTAGAAGAGATATGGCCATGGTCTCACTTTGTTGACAATGATGGACAGTTTGGAGACACGTCGAATGGATTAAGTTCTTACTCTGATAGTATTATGACCGAGCAACTACTTGGAGGCGGTGAAACTAGTCATGCTGATGTTAAGAATTTCAATTTCAATGACTTCTCCATTGTTCCCTCAATGGCTGAATTGGACAAAGCGATTGGATCCGTTGCATATAGACAGACAGGCAAATGTATACCGAAATATATCTCAGATGAAGATACTTACAGTAGCTCAACTTTAATGTCCAATAAAAAGCAGCATGGTCATATAAAAAGTTTCGAGATTCCTGAAGGAATTCATCCAGAATATCTCTTGGATGCTGTTGTCGGCAATTTATACAGTGCCTCTGACGAAACTTCATGTAGATCCAACAGTGTTAGGTCTCATATAACAATGCCATCAGAGTTTACCGGCTCCGTTCAGCCACAAATCAATTCTGAAGAAAGCACCGCATTTGTGAAAAATTCAAATGTTGGAAGTGATCTTATGCCTGAGCTTACGGCCATGGGGAACGATGAATTTTCAAACCAGTTTCTATCATCTTTCAATGGCAATTCAGGCTTGTTGATTGATGAGGCGCCACAGGAAAAGGTTAATAATCCTATGAAGCCTATTAGTGGACCAAAGTTTTCTAGCGCGAACAAAAAAAGAGAAAAAGTAGGTAATAAGAAAAATTCAAGGCCAAGAGATAGACAATTGATCATGGATAGGATGAAGGAGTTGAGGGAACTTATCCCCGATGGTGGAAGGTGTAGCATTGATAACCTCTTGGAACGAACCGTAAAGCACATGATGTACTTAAGAATGGTAACAAGTCAGGCTGAGAAACTGAAACGATTTGCTGATCGTGAGGTACCTGAAAGGAAAAGGCAGAAAATAGATGGCAGCCATCCAGGAAGAAGCTGCGCATTTGACTTGGAAAGTGAACTATCATGGCCTATAGTCATAGAAGATCTGGAATCCTCAGGGAACATGCTCATAGAGATGGTATGCAATGAGCATGGACTTTTCTTGGAGATTGCTCAAGTGATCCGAAGGCTGGACATTACCATCTTGAAAGGGATTTTGGAAAACCGTTCGAGTACCAGTTGGGCTTGTTTCATCGTTGAGGTTCCTAGAGGTTTTCACAGGATGGATATCTTATGTCCTTTACTGCATCTTTTGCAGCTTAGAAGAAATCCAGTCTCATAG
Protein sequence

>Msa1106860

MEATSITQLLKGFCDTMQWHYAVFWKLNHLSPMTLTWENAYQKSNQPLGSMWGDISFESPDDVYSSREGTDDSGDYSVRLHMIEMSRRKYSLGEGAVGKLALAKEHFWVSCEDIFTGKFDTSLIPECPDEWLLQFASGIKTILLVPVLPQGVLQFASFNSVAEDLEFITNINEKFNFIHRLEANCTPLNLGTDSQDWSFSTLSHYLMDSFEESSSASTSFNINTSTRFPKDDYEIQLKSLKRANENEMVSSSFETKHIGYVETKSNHLVEEIWPWSHFVDNDGQFGDTSNGLSSYSDSIMTEQLLGGGETSHADVKNFNFNDFSIVPSMAELDKAIGSVAYRQTGKCIPKYISDEDTYSSSTLMSNKKQHGHIKSFEIPEGIHPEYLLDAVVGNLYSASDETSCRSNSVRSHITMPSEFTGSVQPQINSEESTAFVKNSNVGSDLMPELTAMGNDEFSNQFLSSFNGNSGLLIDEAPQEKVNNPMKPISGPKFSSANKKREKVGNKKNSRPRDRQLIMDRMKELRELIPDGGRCSIDNLLERTVKHMMYLRMVTSQAEKLKRFADREVPERKRQKIDGSHPGRSCAFDLESELSWPIVIEDLESSGNMLIEMVCNEHGLFLEIAQVIRRLDITILKGILENRSSTSWACFIVEVPRGFHRMDILCPLLHLLQLRRNPVS*