Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512630 | XP_013461156.1 | 95.588 | 476 | 7 | 1 | 1 | 462 | 1 | 476 | 0.0 | 931 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512630 | A0A072VAG8 | 95.588 | 476 | 7 | 1 | 1 | 462 | 1 | 476 | 0.0 | 931 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0512630 | -0.812359 | 4.412366e-51 | -8.615850e-47 |
| Msa0007370 | Msa0512630 | 0.817861 | 2.647056e-52 | -8.615850e-47 |
| Msa0011450 | Msa0512630 | -0.804763 | 1.848117e-49 | -8.615850e-47 |
| Msa0017300 | Msa0512630 | -0.815056 | 1.123850e-51 | -8.615850e-47 |
| Msa0017670 | Msa0512630 | 0.803291 | 3.738787e-49 | -8.615850e-47 |
| Msa0030700 | Msa0512630 | 0.832621 | 8.516711e-56 | -8.615850e-47 |
| Msa0055830 | Msa0512630 | 0.825543 | 4.427578e-54 | -8.615850e-47 |
| Msa0055940 | Msa0512630 | 0.829194 | 5.899857e-55 | -8.615850e-47 |
| Msa0060670 | Msa0512630 | 0.820125 | 8.091644e-53 | -8.615850e-47 |
| Msa0065670 | Msa0512630 | -0.801797 | 7.600814e-49 | -8.615850e-47 |
| Msa0077570 | Msa0512630 | -0.820053 | 8.405928e-53 | -8.615850e-47 |
| Msa0078120 | Msa0512630 | 0.819336 | 1.225305e-52 | -8.615850e-47 |
| Msa0095810 | Msa0512630 | -0.804963 | 1.678363e-49 | -8.615850e-47 |
| Msa0111110 | Msa0512630 | -0.813117 | 3.011026e-51 | -8.615850e-47 |
| Msa0123800 | Msa0512630 | 0.811153 | 8.071378e-51 | -8.615850e-47 |
| Msa0151510 | Msa0512630 | -0.803477 | 3.421932e-49 | -8.615850e-47 |
| Msa0170630 | Msa0512630 | 0.802593 | 5.212856e-49 | -8.615850e-47 |
| Msa0178840 | Msa0512630 | -0.804824 | 1.794070e-49 | -8.615850e-47 |
| Msa0198990 | Msa0512630 | 0.826997 | 1.995205e-54 | -8.615850e-47 |
| Msa0217060 | Msa0512630 | 0.803314 | 3.698917e-49 | -8.615850e-47 |
| Msa0220400 | Msa0512630 | -0.817925 | 2.560196e-52 | -8.615850e-47 |
| Msa0225190 | Msa0512630 | -0.801343 | 9.415000e-49 | -8.615850e-47 |
| Msa0235290 | Msa0512630 | 0.825257 | 5.171947e-54 | -8.615850e-47 |
| Msa0365210 | Msa0512630 | 0.822727 | 2.028915e-53 | -8.615850e-47 |
| Msa0372300 | Msa0512630 | 0.927403 | 1.233402e-91 | -8.615850e-47 |
| Msa0375330 | Msa0512630 | -0.819437 | 1.162192e-52 | -8.615850e-47 |
| Msa0401860 | Msa0512630 | -0.804337 | 2.267352e-49 | -8.615850e-47 |
| Msa0405460 | Msa0512630 | -0.816610 | 5.059375e-52 | -8.615850e-47 |
| Msa0405470 | Msa0512630 | -0.828900 | 6.950536e-55 | -8.615850e-47 |
| Msa0405550 | Msa0512630 | -0.831544 | 1.572019e-55 | -8.615850e-47 |
| Msa0412790 | Msa0512630 | 0.805439 | 1.334435e-49 | -8.615850e-47 |
| Msa0420610 | Msa0512630 | 0.959462 | 1.812076e-117 | -8.615850e-47 |
| Msa0457560 | Msa0512630 | 0.838215 | 3.283250e-57 | -8.615850e-47 |
| Msa0465820 | Msa0512630 | 0.813281 | 2.770549e-51 | -8.615850e-47 |
| Msa0241750 | Msa0512630 | 0.825738 | 3.979642e-54 | -8.615850e-47 |
| Msa0269170 | Msa0512630 | -0.829888 | 4.001260e-55 | -8.615850e-47 |
| Msa0282960 | Msa0512630 | 0.813284 | 2.766917e-51 | -8.615850e-47 |
| Msa0299530 | Msa0512630 | -0.822173 | 2.728514e-53 | -8.615850e-47 |
| Msa0307670 | Msa0512630 | 0.802733 | 4.875720e-49 | -8.615850e-47 |
| Msa0313900 | Msa0512630 | 0.820614 | 6.249852e-53 | -8.615850e-47 |
| Msa0358300 | Msa0512630 | 0.804016 | 2.644958e-49 | -8.615850e-47 |
| Msa0483970 | Msa0512630 | -0.829428 | 5.176545e-55 | -8.615850e-47 |
| Msa0512630 | Msa0513970 | 0.825867 | 3.709741e-54 | -8.615850e-47 |
| Msa0512630 | Msa0543560 | 0.814945 | 1.189529e-51 | -8.615850e-47 |
| Msa0512630 | Msa0559650 | -0.805230 | 1.475770e-49 | -8.615850e-47 |
| Msa0512630 | Msa0590620 | -0.800785 | 1.224298e-48 | -8.615850e-47 |
| Msa0512630 | Msa0592330 | 0.807388 | 5.179582e-50 | -8.615850e-47 |
| Msa0512630 | Msa0657710 | 0.820391 | 7.031680e-53 | -8.615850e-47 |
| Msa0512630 | Msa0657720 | 0.829169 | 5.983301e-55 | -8.615850e-47 |
| Msa0512630 | Msa0658190 | 0.810551 | 1.089893e-50 | -8.615850e-47 |
| Msa0512630 | Msa0702790 | 0.823651 | 1.235143e-53 | -8.615850e-47 |
| Msa0512630 | Msa0702800 | 0.817741 | 2.817053e-52 | -8.615850e-47 |
| Msa0512630 | Msa0731590 | 0.800718 | 1.263469e-48 | -8.615850e-47 |
| Msa0512630 | Msa0736920 | 0.805656 | 1.201349e-49 | -8.615850e-47 |
| Msa0512630 | Msa0744640 | 0.808171 | 3.530443e-50 | -8.615850e-47 |
| Msa0512630 | Msa0773990 | 0.808448 | 3.081993e-50 | -8.615850e-47 |
| Msa0512630 | Msa0778570 | 0.807971 | 3.894661e-50 | -8.615850e-47 |
| Msa0512630 | Msa0795750 | 0.817325 | 3.497276e-52 | -8.615850e-47 |
| Msa0512630 | Msa0828950 | 0.821932 | 3.103039e-53 | -8.615850e-47 |
| Msa0512630 | Msa0828960 | 0.818557 | 1.842132e-52 | -8.615850e-47 |
| Msa0512630 | Msa0841730 | 0.808385 | 3.179274e-50 | -8.615850e-47 |
| Msa0512630 | Msa0862480 | -0.808963 | 2.391948e-50 | -8.615850e-47 |
| Msa0512630 | Msa0867660 | -0.831360 | 1.744710e-55 | -8.615850e-47 |
| Msa0512630 | Msa0879930 | 0.834145 | 3.550645e-56 | -8.615850e-47 |
| Msa0512630 | Msa0881040 | 0.805826 | 1.106428e-49 | -8.615850e-47 |
| Msa0512630 | Msa0908260 | -0.827799 | 1.281049e-54 | -8.615850e-47 |
| Msa0512630 | Msa0908270 | -0.802568 | 5.275580e-49 | -8.615850e-47 |
| Msa0512630 | Msa0908280 | -0.800741 | 1.249924e-48 | -8.615850e-47 |
| Msa0512630 | Msa0908470 | -0.823799 | 1.139940e-53 | -8.615850e-47 |
| Msa0512630 | Msa0908510 | -0.824580 | 7.472372e-54 | -8.615850e-47 |
| Msa0512630 | Msa0908630 | -0.822239 | 2.634715e-53 | -8.615850e-47 |
| Msa0512630 | Msa0908690 | -0.820433 | 6.877440e-53 | -8.615850e-47 |
| Msa0512630 | Msa0908700 | -0.824637 | 7.246197e-54 | -8.615850e-47 |
| Msa0512630 | Msa0924840 | -0.803118 | 4.061462e-49 | -8.615850e-47 |
| Msa0512630 | Msa0924900 | -0.828294 | 9.736313e-55 | -8.615850e-47 |
| Msa0512630 | Msa0930270 | 0.802143 | 6.451088e-49 | -8.615850e-47 |
| Msa0512630 | Msa0935720 | 0.800081 | 1.703352e-48 | -8.615850e-47 |
| Msa0512630 | Msa0940910 | 0.804195 | 2.427472e-49 | -8.615850e-47 |
| Msa0512630 | Msa0972680 | 0.802672 | 5.020051e-49 | -8.615850e-47 |
| Msa0512630 | Msa0973080 | -0.800637 | 1.312423e-48 | -8.615850e-47 |
| Msa0512630 | Msa0983600 | -0.826807 | 2.214994e-54 | -8.615850e-47 |
| Msa0512630 | Msa0983610 | -0.827233 | 1.752085e-54 | -8.615850e-47 |
| Msa0512630 | Msa1019420 | 0.815134 | 1.080293e-51 | -8.615850e-47 |
| Msa0512630 | Msa1086490 | -0.821910 | 3.139974e-53 | -8.615850e-47 |
| Msa0512630 | Msa1086670 | -0.811119 | 8.210537e-51 | -8.615850e-47 |
| Msa0512630 | Msa1086760 | -0.829457 | 5.093335e-55 | -8.615850e-47 |
| Msa0512630 | Msa1086770 | -0.820516 | 6.581902e-53 | -8.615850e-47 |
| Msa0512630 | Msa1086940 | -0.822579 | 2.196586e-53 | -8.615850e-47 |
| Msa0512630 | Msa1087070 | -0.830570 | 2.725820e-55 | -8.615850e-47 |
| Msa0512630 | Msa1087090 | -0.827635 | 1.403476e-54 | -8.615850e-47 |
| Msa0512630 | Msa1092310 | 0.828905 | 6.931043e-55 | -8.615850e-47 |
| Msa0512630 | Msa1106590 | 0.802759 | 4.815790e-49 | -8.615850e-47 |
| Msa0512630 | Msa1106860 | 0.802486 | 5.484628e-49 | -8.615850e-47 |
| Msa0512630 | Msa1150280 | 0.826011 | 3.427745e-54 | -8.615850e-47 |
| Msa0512630 | Msa1154320 | 0.808544 | 2.940370e-50 | -8.615850e-47 |
| Msa0512630 | Msa1202800 | 0.809467 | 1.865038e-50 | -8.615850e-47 |
| Msa0512630 | Msa1207920 | -0.801462 | 8.903728e-49 | -8.615850e-47 |
| Msa0512630 | Msa1238600 | 0.827826 | 1.262431e-54 | -8.615850e-47 |
| Msa0512630 | Msa1238660 | 0.810712 | 1.005797e-50 | -8.615850e-47 |
| Msa0512630 | Msa1255210 | 0.820429 | 6.891157e-53 | -8.615850e-47 |
| Msa0512630 | Msa1268390 | 0.808976 | 2.376387e-50 | -8.615850e-47 |
| Msa0512630 | Msa1289050 | 0.806831 | 6.794658e-50 | -8.615850e-47 |
| Msa0512630 | Msa1289090 | 0.809990 | 1.439919e-50 | -8.615850e-47 |
| Msa0512630 | Msa1295650 | 0.816059 | 6.720360e-52 | -8.615850e-47 |
| Msa0512630 | Msa1319560 | 0.804781 | 1.831738e-49 | -8.615850e-47 |
| Msa0512630 | Msa1343600 | 0.806713 | 7.196340e-50 | -8.615850e-47 |
| Msa0512630 | Msa1348170 | -0.819801 | 9.598282e-53 | -8.615850e-47 |
| Msa0512630 | Msa1354360 | -0.823041 | 1.714413e-53 | -8.615850e-47 |
| Msa0512630 | Msa1354400 | -0.826773 | 2.256804e-54 | -8.615850e-47 |
| Msa0512630 | Msa1354520 | -0.826016 | 3.418309e-54 | -8.615850e-47 |
| Msa0512630 | Msa1354530 | -0.825991 | 3.465747e-54 | -8.615850e-47 |
| Msa0512630 | Msa1354650 | -0.822986 | 1.766185e-53 | -8.615850e-47 |
| Msa0512630 | Msa1354660 | -0.828219 | 1.015344e-54 | -8.615850e-47 |
| Msa0512630 | Msa1354780 | -0.818338 | 2.064612e-52 | -8.615850e-47 |
| Msa0512630 | Msa1354790 | -0.829389 | 5.290827e-55 | -8.615850e-47 |
| Msa0512630 | Msa1354960 | -0.832050 | 1.179069e-55 | -8.615850e-47 |
| Msa0512630 | Msa1364350 | -0.803042 | 4.209468e-49 | -8.615850e-47 |
| Msa0512630 | Msa1365990 | -0.825575 | 4.349304e-54 | -8.615850e-47 |
| Msa0512630 | Msa1366020 | -0.829128 | 6.120514e-55 | -8.615850e-47 |
| Msa0512630 | Msa1366030 | -0.823675 | 1.219233e-53 | -8.615850e-47 |
| Msa0512630 | Msa1366060 | -0.827342 | 1.649311e-54 | -8.615850e-47 |
| Msa0512630 | Msa1368260 | -0.829151 | 6.043533e-55 | -8.615850e-47 |
| Msa0512630 | Msa1385360 | -0.820286 | 7.433924e-53 | -8.615850e-47 |
| Msa0512630 | Msa1385390 | -0.831214 | 1.895173e-55 | -8.615850e-47 |
| Msa0512630 | Msa1391130 | -0.830007 | 3.741380e-55 | -8.615850e-47 |
| Msa0512630 | Msa1391140 | -0.824792 | 6.661930e-54 | -8.615850e-47 |
| Msa0512630 | Msa1391260 | -0.822045 | 2.922194e-53 | -8.615850e-47 |
| Msa0512630 | Msa1417380 | 0.821099 | 4.832844e-53 | -8.615850e-47 |
| Msa0512630 | Msa1422860 | 0.809158 | 2.172261e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512630 | MtrunA17_Chr3g0120281 | 95.588 | 476 | 7 | 1 | 1 | 462 | 1 | 476 | 0.0 | 931 |
| Msa0512630 | MtrunA17_Chr4g0029221 | 44.780 | 431 | 198 | 9 | 45 | 454 | 95 | 506 | 2.75e-108 | 330 |
| Msa0512630 | MtrunA17_Chr1g0181371 | 39.277 | 415 | 200 | 12 | 67 | 454 | 97 | 486 | 1.12e-87 | 276 |
| Msa0512630 | MtrunA17_Chr2g0326551 | 40.967 | 393 | 195 | 11 | 71 | 441 | 89 | 466 | 2.47e-82 | 263 |
| Msa0512630 | MtrunA17_Chr2g0286611 | 34.515 | 423 | 212 | 15 | 25 | 424 | 24 | 404 | 1.56e-57 | 195 |
| Msa0512630 | MtrunA17_Chr7g0246251 | 32.883 | 222 | 94 | 5 | 256 | 437 | 1 | 207 | 1.53e-28 | 112 |
| Msa0512630 | MtrunA17_Chr7g0246271 | 37.427 | 171 | 77 | 5 | 238 | 392 | 45 | 201 | 6.08e-27 | 107 |
| Msa0512630 | MtrunA17_Chr7g0240961 | 41.304 | 92 | 41 | 3 | 214 | 294 | 80 | 169 | 2.92e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512630 | AT5G60580.1 | 48.446 | 386 | 159 | 10 | 55 | 422 | 84 | 447 | 6.59e-104 | 318 |
| Msa0512630 | AT5G60580.3 | 48.446 | 386 | 159 | 10 | 55 | 422 | 84 | 447 | 6.59e-104 | 318 |
| Msa0512630 | AT5G60580.4 | 47.583 | 393 | 159 | 11 | 55 | 422 | 84 | 454 | 4.46e-101 | 311 |
| Msa0512630 | AT5G60580.2 | 47.583 | 393 | 159 | 11 | 55 | 422 | 84 | 454 | 4.46e-101 | 311 |
| Msa0512630 | AT3G09760.1 | 40.420 | 381 | 184 | 11 | 76 | 435 | 115 | 473 | 9.33e-82 | 261 |
| Msa0512630 | AT5G03180.1 | 38.083 | 386 | 185 | 14 | 76 | 437 | 97 | 452 | 3.89e-76 | 246 |
| Msa0512630 | AT5G03180.4 | 37.887 | 388 | 187 | 14 | 76 | 437 | 62 | 421 | 8.92e-76 | 244 |
| Msa0512630 | AT5G03180.2 | 37.113 | 388 | 190 | 13 | 76 | 437 | 97 | 456 | 1.74e-75 | 244 |
| Msa0512630 | AT3G06330.1 | 34.889 | 407 | 211 | 10 | 33 | 424 | 48 | 415 | 3.02e-58 | 198 |
| Msa0512630 | AT3G06330.4 | 41.111 | 270 | 132 | 4 | 171 | 426 | 50 | 306 | 3.60e-57 | 192 |
| Msa0512630 | AT3G06330.2 | 44.444 | 225 | 110 | 2 | 216 | 426 | 25 | 248 | 4.76e-56 | 187 |
| Msa0512630 | AT5G03180.5 | 37.231 | 325 | 154 | 12 | 76 | 374 | 97 | 397 | 1.87e-54 | 187 |
| Msa0512630 | AT5G03180.3 | 37.920 | 327 | 153 | 13 | 76 | 374 | 97 | 401 | 5.86e-54 | 186 |
| Msa0512630 | AT5G18760.1 | 33.154 | 371 | 205 | 8 | 65 | 421 | 56 | 397 | 4.56e-44 | 160 |
| Msa0512630 | AT3G06330.3 | 33.430 | 344 | 175 | 10 | 33 | 361 | 48 | 352 | 1.11e-33 | 130 |
| Msa0512630 | AT5G18760.2 | 32.759 | 290 | 162 | 8 | 65 | 350 | 56 | 316 | 6.80e-27 | 111 |
| Msa0512630 | AT2G37950.1 | 46.774 | 62 | 30 | 2 | 234 | 294 | 80 | 139 | 1.99e-12 | 66.6 |
| Msa0512630 | AT5G05830.1 | 35.833 | 120 | 66 | 3 | 240 | 349 | 79 | 197 | 1.62e-11 | 63.9 |
| Msa0512630 | AT5G01070.1 | 30.657 | 137 | 76 | 5 | 234 | 366 | 74 | 195 | 2.56e-11 | 63.5 |
Find 109 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCAACATTCACTGGATT+TGG | 0.151106 | 3_4:+62539246 | Msa0512630:CDS |
| CTACAAACTGCTTCTTCTTC+TGG | 0.229948 | 3_4:-62536744 | None:intergenic |
| TAAGACCTGCAACAGATTCT+AGG | 0.241872 | 3_4:+62536209 | Msa0512630:CDS |
| GTGTACCAGGTTTCAGATTT+GGG | 0.251435 | 3_4:+62538343 | Msa0512630:intron |
| AGTGTACCAGGTTTCAGATT+TGG | 0.280953 | 3_4:+62538342 | Msa0512630:intron |
| TACTTTCTGATAGGAGCTTT+AGG | 0.312686 | 3_4:+62535780 | Msa0512630:CDS |
| AGATGAAAGACTAGGCCTTC+TGG | 0.314784 | 3_4:-62535615 | None:intergenic |
| TTTCAACATTCACTGGATTT+GGG | 0.323066 | 3_4:+62539247 | Msa0512630:CDS |
| GTTACTCCAATTGCTAATTC+AGG | 0.332975 | 3_4:+62535965 | Msa0512630:CDS |
| TCACCTGAATCTAACTTTGA+TGG | 0.339013 | 3_4:+62534904 | Msa0512630:exon |
| GCAACAACTTGAAATATAAT+AGG | 0.343424 | 3_4:-62534853 | None:intergenic |
| TTCTTCTCTTCTTCATCATC+AGG | 0.347218 | 3_4:+62534976 | Msa0512630:CDS |
| CCCATCTGATATATTCCATT+AGG | 0.353626 | 3_4:-62539293 | None:intergenic |
| GCACTTTCTAGTGTCCTTGT+TGG | 0.354525 | 3_4:-62535647 | None:intergenic |
| CAGCATGAATTCTCTCCTAA+TGG | 0.357709 | 3_4:+62539278 | Msa0512630:CDS |
| TTAGCGGCTTTGACATTAAC+CGG | 0.367120 | 3_4:-62536184 | None:intergenic |
| CAGAAGAAGAAGCAGTTTGT+AGG | 0.369236 | 3_4:+62536745 | Msa0512630:CDS |
| TCTCCATCAAAGTTAGATTC+AGG | 0.384944 | 3_4:-62534907 | None:intergenic |
| ATCATCAGATAATGGTCCTT+TGG | 0.385393 | 3_4:+62535859 | Msa0512630:CDS |
| ATATCAGATGGGAAACAAAT+AGG | 0.392592 | 3_4:+62539304 | Msa0512630:CDS |
| AGAGAGCAGTAACTAATTAC+AGG | 0.396825 | 3_4:+62536994 | Msa0512630:CDS |
| GATACTTTATCATCAGATAA+TGG | 0.405699 | 3_4:+62535851 | Msa0512630:CDS |
| TTTGGTGGAGCTTGCGGAAG+GGG | 0.407562 | 3_4:+62536773 | Msa0512630:CDS |
| ACTTGAAATATAATAGGAAA+TGG | 0.409263 | 3_4:-62534847 | None:intergenic |
| CTAGTCCTCCGACTGTTGTT+CGG | 0.409328 | 3_4:+62536949 | Msa0512630:CDS |
| GTTCTTCTTTCAACATTCAC+TGG | 0.409765 | 3_4:+62539240 | Msa0512630:CDS |
| AGAGAAGAATCTGACATCAT+TGG | 0.413265 | 3_4:-62534962 | None:intergenic |
| AGCAGTTTGTAGGATTTGTT+TGG | 0.425476 | 3_4:+62536755 | Msa0512630:CDS |
| CAGTGAGCAGGAGTTACATA+TGG | 0.426184 | 3_4:+62539057 | Msa0512630:intron |
| ATAATAAGCCTTCAACTTCA+AGG | 0.427266 | 3_4:+62535882 | Msa0512630:CDS |
| ATCTATCATTGCTTCAACCA+TGG | 0.437805 | 3_4:+62538420 | Msa0512630:CDS |
| TCTGCACCTGAATTAGCAAT+TGG | 0.438182 | 3_4:-62535971 | None:intergenic |
| AGACGCCTAGAATCTGTTGC+AGG | 0.448575 | 3_4:-62536214 | None:intergenic |
| ACTTTGGTAGAATGTGGCCT+TGG | 0.449976 | 3_4:-62535737 | None:intergenic |
| TGCAACAGATTCTAGGCGTC+TGG | 0.456493 | 3_4:+62536216 | Msa0512630:CDS |
| AATAGAATATATGCGCAAAC+AGG | 0.461916 | 3_4:-62539112 | None:intergenic |
| GAATGAGACCTTGAAGTTGA+AGG | 0.470115 | 3_4:-62535890 | None:intergenic |
| AGAGTGTTACTGGAAGATTC+CGG | 0.479931 | 3_4:-62536917 | None:intergenic |
| GAATTAGCAATTGGAGTAAC+CGG | 0.483095 | 3_4:-62535962 | None:intergenic |
| TTGGTAGAATGTGGCCTTGG+TGG | 0.484999 | 3_4:-62535734 | None:intergenic |
| ACAGGATGACAAATGCGAAC+TGG | 0.485665 | 3_4:-62539094 | None:intergenic |
| GCAGGAGAAAGGCAATGAAA+TGG | 0.491496 | 3_4:-62538380 | None:intergenic |
| TCTATCATTGCTTCAACCAT+GGG | 0.492217 | 3_4:+62538421 | Msa0512630:CDS |
| TTTCATAGAGGACTTGACTT+TGG | 0.494952 | 3_4:-62535753 | None:intergenic |
| TAAAGCGGCGCATTCGTTAC+CGG | 0.496773 | 3_4:+62535943 | Msa0512630:CDS |
| CCTTGGTGGCAGTCCTCTAG+TGG | 0.497730 | 3_4:-62535720 | None:intergenic |
| TGTTTGGTGGAGCTTGCGGA+AGG | 0.499210 | 3_4:+62536771 | Msa0512630:CDS |
| GGCAGTCCTCTAGTGGAACC+TGG | 0.502946 | 3_4:-62535713 | None:intergenic |
| TGTTGCAGGTCTTAAATTAG+CGG | 0.503069 | 3_4:-62536200 | None:intergenic |
| CTCTTGCATTGAATCACTGC+GGG | 0.504151 | 3_4:-62536290 | None:intergenic |
| TTCTTCTTCTGGAATATCCT+CGG | 0.504900 | 3_4:-62536733 | None:intergenic |
| GAAACACCATCAGTAGTTGC+TGG | 0.505889 | 3_4:-62536265 | None:intergenic |
| ACCACTTTACTGCACAGTCT+TGG | 0.510134 | 3_4:-62536848 | None:intergenic |
| TCCTAATGGAATATATCAGA+TGG | 0.511034 | 3_4:+62539292 | Msa0512630:CDS |
| AGTGATTCAATGCAAGAGAT+TGG | 0.513825 | 3_4:+62536295 | Msa0512630:CDS |
| GTGGTATCAACTACAGTCAT+TGG | 0.514336 | 3_4:-62539425 | None:intergenic |
| ATGCTAACCAAGACAAGTAC+TGG | 0.518939 | 3_4:-62538111 | None:intergenic |
| AACGTATGCCGAACAACAGT+CGG | 0.522051 | 3_4:-62536957 | None:intergenic |
| ACCAAGACTGTGCAGTAAAG+TGG | 0.528389 | 3_4:+62536847 | Msa0512630:CDS |
| GTAAAGTGGTTTAGTATCAA+AGG | 0.531954 | 3_4:+62536861 | Msa0512630:CDS |
| AGACCTAAAATGCAGGAGAA+AGG | 0.534858 | 3_4:-62538391 | None:intergenic |
| AGTTTGTAGGATTTGTTTGG+TGG | 0.537738 | 3_4:+62536758 | Msa0512630:CDS |
| CCATCAGTAGTTGCTGGCTG+TGG | 0.539566 | 3_4:-62536259 | None:intergenic |
| ATGTCTGCAAGCAGGATGTC+CGG | 0.544697 | 3_4:+62536898 | Msa0512630:CDS |
| TTGGTGGAGCTTGCGGAAGG+GGG | 0.544999 | 3_4:+62536774 | Msa0512630:CDS |
| TGAAAGGAGACCTAAAATGC+AGG | 0.547003 | 3_4:-62538398 | None:intergenic |
| GTTTGGTGGAGCTTGCGGAA+GGG | 0.550368 | 3_4:+62536772 | Msa0512630:CDS |
| GGATGTACCAGTACTTGTCT+TGG | 0.550915 | 3_4:+62538104 | Msa0512630:CDS |
| TGCGCCGCTTTACTCGATGA+AGG | 0.559142 | 3_4:-62535932 | None:intergenic |
| AATGAAATGGCGAGAGCACG+TGG | 0.562922 | 3_4:-62538367 | None:intergenic |
| GGTCCTACATTATCAAGTCC+AGG | 0.565636 | 3_4:+62535695 | Msa0512630:CDS |
| TGTTAATTTCACAGTCCAGA+AGG | 0.566940 | 3_4:+62535600 | Msa0512630:intron |
| CTTGTAGCTTAATGTGAGTG+CGG | 0.568172 | 3_4:+62539209 | Msa0512630:intron |
| TGCATCCTTTGCAGTTGATG+TGG | 0.568430 | 3_4:-62539390 | None:intergenic |
| GTTGAAGGCTTATTATCCAA+AGG | 0.569830 | 3_4:-62535875 | None:intergenic |
| GATTTGTTTGGTGGAGCTTG+CGG | 0.571135 | 3_4:+62536767 | Msa0512630:CDS |
| TAATGTAGGACCATCTGTCT+TGG | 0.572242 | 3_4:-62535684 | None:intergenic |
| ATGACTGTAGTTGATACCAC+TGG | 0.573119 | 3_4:+62539428 | Msa0512630:exon |
| TAAATATATCTGAAGAGTGA+AGG | 0.578970 | 3_4:+62539633 | Msa0512630:three_prime_UTR |
| TTGAAGCAATGATAGATGAA+AGG | 0.581811 | 3_4:-62538414 | None:intergenic |
| GAATCTAACTTTGATGGAGA+AGG | 0.587506 | 3_4:+62534910 | Msa0512630:exon |
| AGTGAGCAGGAGTTACATAT+GGG | 0.587689 | 3_4:+62539058 | Msa0512630:intron |
| CCTAATGGAATATATCAGAT+GGG | 0.587851 | 3_4:+62539293 | Msa0512630:CDS |
| AGGATGGACTGCAGTTGCAA+AGG | 0.592249 | 3_4:+62536807 | Msa0512630:CDS |
| GACTTGACTTTGGTAGAATG+TGG | 0.592551 | 3_4:-62535743 | None:intergenic |
| TCAAGTCCAGGTTCCACTAG+AGG | 0.596293 | 3_4:+62535707 | Msa0512630:CDS |
| GACATGTGATGTCTGCAAGC+AGG | 0.596981 | 3_4:+62536890 | Msa0512630:CDS |
| AGTCATTGAAGATGCTTCCG+AGG | 0.600332 | 3_4:+62536716 | Msa0512630:intron |
| TCAGGTGCAGAGAATGTACA+TGG | 0.600495 | 3_4:+62535983 | Msa0512630:CDS |
| CCACTAGAGGACTGCCACCA+AGG | 0.602093 | 3_4:+62535720 | Msa0512630:CDS |
| CCACAGCCAGCAACTACTGA+TGG | 0.604437 | 3_4:+62536259 | Msa0512630:CDS |
| TGTACATGGAAGACATGTAG+AGG | 0.604726 | 3_4:+62535997 | Msa0512630:CDS |
| GTTCCCTTCATCGAGTAAAG+CGG | 0.605134 | 3_4:+62535928 | Msa0512630:CDS |
| AGAATGCAGACATATACTCT+AGG | 0.607758 | 3_4:+62539594 | Msa0512630:three_prime_UTR |
| TCATCTTCTACCAAGACAGA+TGG | 0.609887 | 3_4:+62535674 | Msa0512630:CDS |
| TATACTCTACAGGATCTGGC+AGG | 0.611321 | 3_4:+62538083 | Msa0512630:intron |
| GACAACCACATCAACTGCAA+AGG | 0.622140 | 3_4:+62539385 | Msa0512630:CDS |
| GCGCCGCTTTACTCGATGAA+GGG | 0.624936 | 3_4:-62535931 | None:intergenic |
| CTAACTTTGATGGAGAAGGA+AGG | 0.627321 | 3_4:+62534914 | Msa0512630:exon |
| GAACCTGGACTTGATAATGT+AGG | 0.628266 | 3_4:-62535698 | None:intergenic |
| CATCTCTACAAATACCAACA+AGG | 0.638179 | 3_4:+62535633 | Msa0512630:CDS |
| ATTTGTAGAGATGAAAGACT+AGG | 0.650609 | 3_4:-62535623 | None:intergenic |
| GTTTAAAATACTACTGCACA+TGG | 0.670993 | 3_4:-62539568 | None:intergenic |
| CATGGAAGACATGTAGAGGG+TGG | 0.692052 | 3_4:+62536001 | Msa0512630:CDS |
| TAAAATACTACTGCACATGG+TGG | 0.700579 | 3_4:-62539565 | None:intergenic |
| GTACATGGAAGACATGTAGA+GGG | 0.703736 | 3_4:+62535998 | Msa0512630:CDS |
| TCTCTTGCATTGAATCACTG+CGG | 0.705550 | 3_4:-62536291 | None:intergenic |
| GTATGCCGAACAACAGTCGG+AGG | 0.720782 | 3_4:-62536954 | None:intergenic |
| ATGAAATGGCGAGAGCACGT+GGG | 0.733732 | 3_4:-62538366 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTATAATTTTTAGCTTT+TGG | + | chr3_4:62535134-62535153 | Msa0512630:intron | 10.0% |
| !!! | ATTTATAATTTTTAGCTTTT+GGG | + | chr3_4:62535135-62535154 | Msa0512630:intron | 10.0% |
| !! | TATCTTTATAGATATTAAAT+AGG | + | chr3_4:62536489-62536508 | Msa0512630:intron | 10.0% |
| !!! | ATATTTTTTCATTTTCTTTT+TGG | + | chr3_4:62538502-62538521 | Msa0512630:intron | 10.0% |
| !!! | TATTTTTTCATTTTCTTTTT+GGG | + | chr3_4:62538503-62538522 | Msa0512630:intron | 10.0% |
| !!! | TTTTAAATATGTTTTTTTGT+TGG | + | chr3_4:62539034-62539053 | Msa0512630:intron | 10.0% |
| !!! | TAATTTTTCTTTAGATCAAA+TGG | + | chr3_4:62535072-62535091 | Msa0512630:intron | 15.0% |
| !!! | AATTTTTCTTTAGATCAAAT+GGG | + | chr3_4:62535073-62535092 | Msa0512630:intron | 15.0% |
| !! | AATATTGGAGAAAATAAAAA+AGG | - | chr3_4:62535175-62535194 | None:intergenic | 15.0% |
| !!! | TTCTCCAATATTTTTTTTTT+TGG | + | chr3_4:62535183-62535202 | Msa0512630:intron | 15.0% |
| !! | ACAACCAAAAAAAAAAATAT+TGG | - | chr3_4:62535190-62535209 | None:intergenic | 15.0% |
| !!! | TTTTATCATAAACCATATTT+CGG | + | chr3_4:62537541-62537560 | Msa0512630:intron | 15.0% |
| !! | TTATTTGAACAATATTCATA+CGG | - | chr3_4:62538553-62538572 | None:intergenic | 15.0% |
| !! | ACTTGAAATATAATAGGAAA+TGG | - | chr3_4:62534850-62534869 | None:intergenic | 20.0% |
| !! | AATGACACAAAAATATCTAA+TGG | - | chr3_4:62535385-62535404 | None:intergenic | 20.0% |
| !!! | ATTATTTGTTGATTAAGATG+TGG | - | chr3_4:62535410-62535429 | None:intergenic | 20.0% |
| !! | AAAAACTAGATTGCTAAAAA+AGG | - | chr3_4:62535474-62535493 | None:intergenic | 20.0% |
| !! | AGTGACATAAAAATATCTAA+TGG | - | chr3_4:62535502-62535521 | None:intergenic | 20.0% |
| !! | AAATTTGGTACATTAAAATG+TGG | - | chr3_4:62535527-62535546 | None:intergenic | 20.0% |
| !! | AAATACATCAAACTCAAATT+TGG | - | chr3_4:62535542-62535561 | None:intergenic | 20.0% |
| !!! | AGAAAGTAAATTTTTCATAG+AGG | - | chr3_4:62535768-62535787 | None:intergenic | 20.0% |
| !! | TGAAAAATTTACTTTCTGAT+AGG | + | chr3_4:62535771-62535790 | Msa0512630:CDS | 20.0% |
| !! | TTATAGTGAAGATTTCAAAA+GGG | - | chr3_4:62536367-62536386 | None:intergenic | 20.0% |
| !! | CTATAAAGATAAAAAGATAG+AGG | - | chr3_4:62536480-62536499 | None:intergenic | 20.0% |
| !! | TCTCTTCATAAATATTCATA+GGG | - | chr3_4:62536523-62536542 | None:intergenic | 20.0% |
| !! | ATCTCTTCATAAATATTCAT+AGG | - | chr3_4:62536524-62536543 | None:intergenic | 20.0% |
| !! | TTCTAGATAATCTTGTAATT+TGG | - | chr3_4:62537140-62537159 | None:intergenic | 20.0% |
| !!! | GCGAAAATAATAAAAAGTAT+TGG | - | chr3_4:62537179-62537198 | None:intergenic | 20.0% |
| !! | TCTATAATTTCATGTTTGTT+AGG | - | chr3_4:62537399-62537418 | None:intergenic | 20.0% |
| !! | ATATTTGGAAATTAATGAGT+TGG | - | chr3_4:62537568-62537587 | None:intergenic | 20.0% |
| !!! | AGAAAGTATTAGGAAATATT+TGG | - | chr3_4:62537583-62537602 | None:intergenic | 20.0% |
| !!! | TTTTACTAGGCAAATATATT+AGG | + | chr3_4:62537737-62537756 | Msa0512630:intron | 20.0% |
| !! | ATACAAAACAATCTACTATT+TGG | - | chr3_4:62537909-62537928 | None:intergenic | 20.0% |
| !! | GAGTATATTATAATTAGAGA+AGG | - | chr3_4:62538070-62538089 | None:intergenic | 20.0% |
| !! | CTAATTATAATATACTCTAC+AGG | + | chr3_4:62538073-62538092 | Msa0512630:intron | 20.0% |
| !! | TAAAATGATCAAACAAAGAT+CGG | - | chr3_4:62538179-62538198 | None:intergenic | 20.0% |
| !!! | ATTTTTGTATTTGTACAAGA+TGG | + | chr3_4:62538294-62538313 | Msa0512630:intron | 20.0% |
| !! | TATTTGAACAATATTCATAC+GGG | - | chr3_4:62538552-62538571 | None:intergenic | 20.0% |
| !!! | TTATGATTTTGTTTCAGATT+AGG | - | chr3_4:62538633-62538652 | None:intergenic | 20.0% |
| !! | ATGTTAAAAACAATGAAACA+CGG | - | chr3_4:62538861-62538880 | None:intergenic | 20.0% |
| !!! | ATTTTCTATGATACTAAGAT+TGG | + | chr3_4:62539511-62539530 | Msa0512630:three_prime_UTR | 20.0% |
| ! | GCAACAACTTGAAATATAAT+AGG | - | chr3_4:62534856-62534875 | None:intergenic | 25.0% |
| ! | TTTCAAAGAAAGAAGCAAAA+GGG | - | chr3_4:62535017-62535036 | None:intergenic | 25.0% |
| !! | TTTTCAAAGAAAGAAGCAAA+AGG | - | chr3_4:62535018-62535037 | None:intergenic | 25.0% |
| ! | ATTATGCTACATAAGCAAAA+GGG | - | chr3_4:62535056-62535075 | None:intergenic | 25.0% |
| ! | AATTATGCTACATAAGCAAA+AGG | - | chr3_4:62535057-62535076 | None:intergenic | 25.0% |
| ! | AGAATGGAACAATTATTTGT+CGG | - | chr3_4:62535326-62535345 | None:intergenic | 25.0% |
| ! | GATACTTTATCATCAGATAA+TGG | + | chr3_4:62535851-62535870 | Msa0512630:CDS | 25.0% |
| ! | TGGTAAATCTTCATGATATA+TGG | + | chr3_4:62536315-62536334 | Msa0512630:intron | 25.0% |
| ! | GTTATAGTGAAGATTTCAAA+AGG | - | chr3_4:62536368-62536387 | None:intergenic | 25.0% |
| !!! | ATAATAAAAAGTATTGGTCC+TGG | - | chr3_4:62537173-62537192 | None:intergenic | 25.0% |
| ! | AAGGTTAATCTGTATGTAAA+TGG | + | chr3_4:62537362-62537381 | Msa0512630:intron | 25.0% |
| !! | AATTCTGTAATAACCTTTTC+TGG | - | chr3_4:62537454-62537473 | None:intergenic | 25.0% |
| ! | GGTTTATGATAAAAACATCA+TGG | - | chr3_4:62537535-62537554 | None:intergenic | 25.0% |
| !!! | AAACTATCACAGAAAGTATT+AGG | - | chr3_4:62537593-62537612 | None:intergenic | 25.0% |
| ! | TATAAATGTGACAACTTACT+AGG | + | chr3_4:62537690-62537709 | Msa0512630:intron | 25.0% |
| ! | ATGTAACAAATAACTTGAGA+TGG | - | chr3_4:62537812-62537831 | None:intergenic | 25.0% |
| !! | TTTAGAGCGTTATTTAAGAA+AGG | - | chr3_4:62537836-62537855 | None:intergenic | 25.0% |
| !! | TCTCAGTTTCTTTAGTTTAT+AGG | - | chr3_4:62537878-62537897 | None:intergenic | 25.0% |
| !!! | GATTGTTTTGTATTTCTCTT+CGG | + | chr3_4:62537916-62537935 | Msa0512630:intron | 25.0% |
| ! | TCTCTTTCAATAATAGTTTC+AGG | - | chr3_4:62537959-62537978 | None:intergenic | 25.0% |
| !!! | CATTTTAGTGTTTTCAAAAC+CGG | + | chr3_4:62538192-62538211 | Msa0512630:intron | 25.0% |
| ! | ATTTGAACAATATTCATACG+GGG | - | chr3_4:62538551-62538570 | None:intergenic | 25.0% |
| !!! | AGAATTTGCTCTTTGAAATT+TGG | + | chr3_4:62538665-62538684 | Msa0512630:intron | 25.0% |
| !!! | GAATTTGCTCTTTGAAATTT+GGG | + | chr3_4:62538666-62538685 | Msa0512630:intron | 25.0% |
| ! | TTTAGCAAGAATTGGAATAA+AGG | + | chr3_4:62538702-62538721 | Msa0512630:intron | 25.0% |
| ! | TTGAATGTAATCACATTCAT+TGG | - | chr3_4:62538786-62538805 | None:intergenic | 25.0% |
| !!! | TTCATTGTTTTTAACATGAG+TGG | + | chr3_4:62538864-62538883 | Msa0512630:intron | 25.0% |
| ! | GATTATTGTAACAAGTTACT+AGG | - | chr3_4:62538978-62538997 | None:intergenic | 25.0% |
| ! | GACTTATTCATAAAACATGA+TGG | - | chr3_4:62539163-62539182 | None:intergenic | 25.0% |
| !!! | ACCAGTTTTTCAAAACTATA+AGG | + | chr3_4:62539456-62539475 | Msa0512630:three_prime_UTR | 25.0% |
| !!! | CCAGTTTTTCAAAACTATAA+GGG | + | chr3_4:62539457-62539476 | Msa0512630:three_prime_UTR | 25.0% |
| ! | TAAATATATCTGAAGAGTGA+AGG | + | chr3_4:62539633-62539652 | Msa0512630:three_prime_UTR | 25.0% |
| TTCAAAGAAAGAAGCAAAAG+GGG | - | chr3_4:62535016-62535035 | None:intergenic | 30.0% | |
| TTATATCATCTTCTACCCTA+TGG | - | chr3_4:62535115-62535134 | None:intergenic | 30.0% | |
| !! | TTCCATTCTAAAATCGAACT+CGG | + | chr3_4:62535337-62535356 | Msa0512630:intron | 30.0% |
| ! | TTTTAGACATGTGCTAGAAA+TGG | + | chr3_4:62535560-62535579 | Msa0512630:intron | 30.0% |
| ATTTGTAGAGATGAAAGACT+AGG | - | chr3_4:62535626-62535645 | None:intergenic | 30.0% | |
| ATAATAAGCCTTCAACTTCA+AGG | + | chr3_4:62535882-62535901 | Msa0512630:CDS | 30.0% | |
| TTATGCTGTTCTCATAGTAA+TGG | + | chr3_4:62536043-62536062 | Msa0512630:intron | 30.0% | |
| ATCTTCAAATAAGCTTGTCA+TGG | - | chr3_4:62536564-62536583 | None:intergenic | 30.0% | |
| GTAAAGTGGTTTAGTATCAA+AGG | + | chr3_4:62536861-62536880 | Msa0512630:CDS | 30.0% | |
| !!! | GAAATTTTCAAGAGTGTTAC+TGG | - | chr3_4:62536930-62536949 | None:intergenic | 30.0% |
| TCTAATATGTAAGTTTGACG+AGG | - | chr3_4:62537070-62537089 | None:intergenic | 30.0% | |
| ! | ATCTAGAACATTTAAGTTCC+AGG | + | chr3_4:62537152-62537171 | Msa0512630:intron | 30.0% |
| TTCGCTTTGCTTTGATTATA+AGG | + | chr3_4:62537194-62537213 | Msa0512630:intron | 30.0% | |
| ! | CTTTCTGTGATAGTTTTTCT+AGG | + | chr3_4:62537597-62537616 | Msa0512630:intron | 30.0% |
| TATAATTAGAGAAGGCAGTT+GGG | - | chr3_4:62538062-62538081 | None:intergenic | 30.0% | |
| TTATAATTAGAGAAGGCAGT+TGG | - | chr3_4:62538063-62538082 | None:intergenic | 30.0% | |
| ATAATATACTCTACAGGATC+TGG | + | chr3_4:62538079-62538098 | Msa0512630:intron | 30.0% | |
| TTGAAGCAATGATAGATGAA+AGG | - | chr3_4:62538417-62538436 | None:intergenic | 30.0% | |
| TAAGGGAACTAAAGTTACTT+TGG | - | chr3_4:62538479-62538498 | None:intergenic | 30.0% | |
| ! | ACTACCATTCAACGATTTTA+GGG | - | chr3_4:62538603-62538622 | None:intergenic | 30.0% |
| ! | TACTACCATTCAACGATTTT+AGG | - | chr3_4:62538604-62538623 | None:intergenic | 30.0% |
| ! | TGAAATTTGGGATTTACCAA+TGG | + | chr3_4:62538678-62538697 | Msa0512630:intron | 30.0% |
| CAACGATTGTCAAATTGTAT+CGG | + | chr3_4:62538746-62538765 | Msa0512630:intron | 30.0% | |
| AATGAACAGGAAAATTCACA+GGG | - | chr3_4:62538912-62538931 | None:intergenic | 30.0% | |
| TAATGAACAGGAAAATTCAC+AGG | - | chr3_4:62538913-62538932 | None:intergenic | 30.0% | |
| AGTAGAAGAGTTTAATGAAC+AGG | - | chr3_4:62538925-62538944 | None:intergenic | 30.0% | |
| CTAGGTAATTATCATGTCTA+TGG | - | chr3_4:62538960-62538979 | None:intergenic | 30.0% | |
| ! | TACAATAATCACTTGTTAGC+TGG | + | chr3_4:62538988-62539007 | Msa0512630:intron | 30.0% |
| AATAGAATATATGCGCAAAC+AGG | - | chr3_4:62539115-62539134 | None:intergenic | 30.0% | |
| AGTGGATAATGATCTTACTA+TGG | - | chr3_4:62539138-62539157 | None:intergenic | 30.0% | |
| ! | TCATAAAACATGATGGAAAG+TGG | - | chr3_4:62539156-62539175 | None:intergenic | 30.0% |
| TTTCAACATTCACTGGATTT+GGG | + | chr3_4:62539247-62539266 | Msa0512630:CDS | 30.0% | |
| TCCTAATGGAATATATCAGA+TGG | + | chr3_4:62539292-62539311 | Msa0512630:CDS | 30.0% | |
| CCTAATGGAATATATCAGAT+GGG | + | chr3_4:62539293-62539312 | Msa0512630:CDS | 30.0% | |
| ATATCAGATGGGAAACAAAT+AGG | + | chr3_4:62539304-62539323 | Msa0512630:CDS | 30.0% | |
| !!! | CCCTTATAGTTTTGAAAAAC+TGG | - | chr3_4:62539460-62539479 | None:intergenic | 30.0% |
| !!! | CATGGTGGAATCAAATTTTT+TGG | - | chr3_4:62539553-62539572 | None:intergenic | 30.0% |
| ! | GTTTAAAATACTACTGCACA+TGG | - | chr3_4:62539571-62539590 | None:intergenic | 30.0% |
| TCACCTGAATCTAACTTTGA+TGG | + | chr3_4:62534904-62534923 | Msa0512630:exon | 35.0% | |
| TCTCCATCAAAGTTAGATTC+AGG | - | chr3_4:62534910-62534929 | None:intergenic | 35.0% | |
| GAATCTAACTTTGATGGAGA+AGG | + | chr3_4:62534910-62534929 | Msa0512630:exon | 35.0% | |
| AGAGAAGAATCTGACATCAT+TGG | - | chr3_4:62534965-62534984 | None:intergenic | 35.0% | |
| TTCTTCTCTTCTTCATCATC+AGG | + | chr3_4:62534976-62534995 | Msa0512630:CDS | 35.0% | |
| ! | TAGATCAAATGGGTTTCCAT+TGG | + | chr3_4:62535083-62535102 | Msa0512630:intron | 35.0% |
| !! | TTTCCATTGGTTTGAACCAT+AGG | + | chr3_4:62535096-62535115 | Msa0512630:intron | 35.0% |
| !! | TTCCATTGGTTTGAACCATA+GGG | + | chr3_4:62535097-62535116 | Msa0512630:intron | 35.0% |
| TCGTAATCCTAAGTTTGGTT+TGG | + | chr3_4:62535237-62535256 | Msa0512630:intron | 35.0% | |
| CTTAACTCCAAACCAAACTT+AGG | - | chr3_4:62535247-62535266 | None:intergenic | 35.0% | |
| CTTAACTCATAGCCAAACTT+GGG | - | chr3_4:62535297-62535316 | None:intergenic | 35.0% | |
| ACTTAACTCATAGCCAAACT+TGG | - | chr3_4:62535298-62535317 | None:intergenic | 35.0% | |
| !! | AACCGAGTTCGATTTTAGAA+TGG | - | chr3_4:62535342-62535361 | None:intergenic | 35.0% |
| TGTTAATTTCACAGTCCAGA+AGG | + | chr3_4:62535600-62535619 | Msa0512630:intron | 35.0% | |
| CATCTCTACAAATACCAACA+AGG | + | chr3_4:62535633-62535652 | Msa0512630:CDS | 35.0% | |
| TTTCATAGAGGACTTGACTT+TGG | - | chr3_4:62535756-62535775 | None:intergenic | 35.0% | |
| TACTTTCTGATAGGAGCTTT+AGG | + | chr3_4:62535780-62535799 | Msa0512630:CDS | 35.0% | |
| ! | ATCATCAGATAATGGTCCTT+TGG | + | chr3_4:62535859-62535878 | Msa0512630:CDS | 35.0% |
| GTTGAAGGCTTATTATCCAA+AGG | - | chr3_4:62535878-62535897 | None:intergenic | 35.0% | |
| GAATTAGCAATTGGAGTAAC+CGG | - | chr3_4:62535965-62535984 | None:intergenic | 35.0% | |
| GTTACTCCAATTGCTAATTC+AGG | + | chr3_4:62535965-62535984 | Msa0512630:CDS | 35.0% | |
| TGTTGCAGGTCTTAAATTAG+CGG | - | chr3_4:62536203-62536222 | None:intergenic | 35.0% | |
| AGTGATTCAATGCAAGAGAT+TGG | + | chr3_4:62536295-62536314 | Msa0512630:CDS | 35.0% | |
| AGTGCAAATGTAATTGCGAT+GGG | - | chr3_4:62536608-62536627 | None:intergenic | 35.0% | |
| AAGTGCAAATGTAATTGCGA+TGG | - | chr3_4:62536609-62536628 | None:intergenic | 35.0% | |
| CTTCAATGACTGAAACCAAA+CGG | - | chr3_4:62536707-62536726 | None:intergenic | 35.0% | |
| !! | TTCTTCTTCTGGAATATCCT+CGG | - | chr3_4:62536736-62536755 | None:intergenic | 35.0% |
| ! | AGCAGTTTGTAGGATTTGTT+TGG | + | chr3_4:62536755-62536774 | Msa0512630:CDS | 35.0% |
| ! | AGTTTGTAGGATTTGTTTGG+TGG | + | chr3_4:62536758-62536777 | Msa0512630:CDS | 35.0% |
| AGAGAGCAGTAACTAATTAC+AGG | + | chr3_4:62536994-62537013 | Msa0512630:CDS | 35.0% | |
| AAGCATGACAAGAACATTGT+AGG | - | chr3_4:62537099-62537118 | None:intergenic | 35.0% | |
| TTCTTGTCATGCTTACTTGT+TGG | + | chr3_4:62537105-62537124 | Msa0512630:intron | 35.0% | |
| ATCTTGTAATTTGGACCACA+AGG | - | chr3_4:62537131-62537150 | None:intergenic | 35.0% | |
| CTTTGCTTTGATTATAAGGC+TGG | + | chr3_4:62537198-62537217 | Msa0512630:intron | 35.0% | |
| TTGAGCGATTTCTCTTCATT+AGG | - | chr3_4:62537302-62537321 | None:intergenic | 35.0% | |
| AGAGAAATCGCTCAAAGATA+TGG | + | chr3_4:62537307-62537326 | Msa0512630:intron | 35.0% | |
| ATTCACTGAACGAGTCAAAA+AGG | + | chr3_4:62537343-62537362 | Msa0512630:intron | 35.0% | |
| ATCTGTATGTAAATGGCTGT+TGG | + | chr3_4:62537369-62537388 | Msa0512630:intron | 35.0% | |
| TCTGTATGTAAATGGCTGTT+GGG | + | chr3_4:62537370-62537389 | Msa0512630:intron | 35.0% | |
| ! | TAATGAGTTGGACCGAAATA+TGG | - | chr3_4:62537556-62537575 | None:intergenic | 35.0% |
| ACATAATTATGCGATGTTGG+AGG | - | chr3_4:62537653-62537672 | None:intergenic | 35.0% | |
| TCCAACATCGCATAATTATG+TGG | + | chr3_4:62537652-62537671 | Msa0512630:intron | 35.0% | |
| TCCACATAATTATGCGATGT+TGG | - | chr3_4:62537656-62537675 | None:intergenic | 35.0% | |
| !!! | GACTACATTTTTTTCCCACA+TGG | - | chr3_4:62537987-62538006 | None:intergenic | 35.0% |
| ATAATTAGAGAAGGCAGTTG+GGG | - | chr3_4:62538061-62538080 | None:intergenic | 35.0% | |
| TTATACAACTAGTGACCCAT+TGG | - | chr3_4:62538260-62538279 | None:intergenic | 35.0% | |
| !! | TCAAAGATTTCTAGTGTACC+AGG | + | chr3_4:62538330-62538349 | Msa0512630:intron | 35.0% |
| ATCTATCATTGCTTCAACCA+TGG | + | chr3_4:62538420-62538439 | Msa0512630:CDS | 35.0% | |
| TCTATCATTGCTTCAACCAT+GGG | + | chr3_4:62538421-62538440 | Msa0512630:CDS | 35.0% | |
| ! | AAGTTACTTTGGCATGCTAA+GGG | - | chr3_4:62538468-62538487 | None:intergenic | 35.0% |
| ! | AAAGTTACTTTGGCATGCTA+AGG | - | chr3_4:62538469-62538488 | None:intergenic | 35.0% |
| !!! | TTTTTGGGCCGATTAGTTTT+TGG | + | chr3_4:62538518-62538537 | Msa0512630:intron | 35.0% |
| GTTCATGGCCAAAAACTAAT+CGG | - | chr3_4:62538529-62538548 | None:intergenic | 35.0% | |
| ! | CTACCATTCAACGATTTTAG+GGG | - | chr3_4:62538602-62538621 | None:intergenic | 35.0% |
| CCAATTCTTGCTAAATCCAT+TGG | - | chr3_4:62538697-62538716 | None:intergenic | 35.0% | |
| ! | CCAATGGATTTAGCAAGAAT+TGG | + | chr3_4:62538694-62538713 | Msa0512630:intron | 35.0% |
| ATCGTTGTAAAGTGAAATGC+AGG | - | chr3_4:62538733-62538752 | None:intergenic | 35.0% | |
| GTTCTTCTTTCAACATTCAC+TGG | + | chr3_4:62539240-62539259 | Msa0512630:CDS | 35.0% | |
| CTTTCAACATTCACTGGATT+TGG | + | chr3_4:62539246-62539265 | Msa0512630:CDS | 35.0% | |
| CCCATCTGATATATTCCATT+AGG | - | chr3_4:62539296-62539315 | None:intergenic | 35.0% | |
| !!! | AAGATTGGCATTTTAGAGTG+TGG | + | chr3_4:62539526-62539545 | Msa0512630:three_prime_UTR | 35.0% |
| TAAAATACTACTGCACATGG+TGG | - | chr3_4:62539568-62539587 | None:intergenic | 35.0% | |
| AGAATGCAGACATATACTCT+AGG | + | chr3_4:62539594-62539613 | Msa0512630:three_prime_UTR | 35.0% | |
| CTAACTTTGATGGAGAAGGA+AGG | + | chr3_4:62534914-62534933 | Msa0512630:exon | 40.0% | |
| TACCCTATGGTTCAAACCAA+TGG | - | chr3_4:62535102-62535121 | None:intergenic | 40.0% | |
| GTTAATCCTCTCAGAAGAAG+AGG | + | chr3_4:62535210-62535229 | Msa0512630:intron | 40.0% | |
| GACACTCGTAATCCTAAGTT+TGG | + | chr3_4:62535232-62535251 | Msa0512630:intron | 40.0% | |
| GGAGTTAAGTAAAGTCTGAC+TGG | + | chr3_4:62535258-62535277 | Msa0512630:intron | 40.0% | |
| TCATCTTCTACCAAGACAGA+TGG | + | chr3_4:62535674-62535693 | Msa0512630:CDS | 40.0% | |
| TAATGTAGGACCATCTGTCT+TGG | - | chr3_4:62535687-62535706 | None:intergenic | 40.0% | |
| !! | GAACCTGGACTTGATAATGT+AGG | - | chr3_4:62535701-62535720 | None:intergenic | 40.0% |
| GACTTGACTTTGGTAGAATG+TGG | - | chr3_4:62535746-62535765 | None:intergenic | 40.0% | |
| GAATGAGACCTTGAAGTTGA+AGG | - | chr3_4:62535893-62535912 | None:intergenic | 40.0% | |
| TCTGCACCTGAATTAGCAAT+TGG | - | chr3_4:62535974-62535993 | None:intergenic | 40.0% | |
| TGTACATGGAAGACATGTAG+AGG | + | chr3_4:62535997-62536016 | Msa0512630:CDS | 40.0% | |
| GTACATGGAAGACATGTAGA+GGG | + | chr3_4:62535998-62536017 | Msa0512630:CDS | 40.0% | |
| ! | GACTCGATCATTTTCAGTTC+CGG | + | chr3_4:62536165-62536184 | Msa0512630:CDS | 40.0% |
| ! | TTAGCGGCTTTGACATTAAC+CGG | - | chr3_4:62536187-62536206 | None:intergenic | 40.0% |
| TAAGACCTGCAACAGATTCT+AGG | + | chr3_4:62536209-62536228 | Msa0512630:CDS | 40.0% | |
| TCTCTTGCATTGAATCACTG+CGG | - | chr3_4:62536294-62536313 | None:intergenic | 40.0% | |
| CTACAAACTGCTTCTTCTTC+TGG | - | chr3_4:62536747-62536766 | None:intergenic | 40.0% | |
| CAGAAGAAGAAGCAGTTTGT+AGG | + | chr3_4:62536745-62536764 | Msa0512630:CDS | 40.0% | |
| ! | AGAGTGTTACTGGAAGATTC+CGG | - | chr3_4:62536920-62536939 | None:intergenic | 40.0% |
| ! | TATAAGGCTGGTTGTAGTCT+AGG | + | chr3_4:62537210-62537229 | Msa0512630:intron | 40.0% |
| ! | ATAAGGCTGGTTGTAGTCTA+GGG | + | chr3_4:62537211-62537230 | Msa0512630:intron | 40.0% |
| CAAAGATATGGACGAAAACC+TGG | + | chr3_4:62537319-62537338 | Msa0512630:intron | 40.0% | |
| GAAATGTGTGTCTATGCATG+CGG | + | chr3_4:62537426-62537445 | Msa0512630:intron | 40.0% | |
| AAATGTGTGTCTATGCATGC+GGG | + | chr3_4:62537427-62537446 | Msa0512630:intron | 40.0% | |
| ACAACTTACTAGGCAATCAC+TGG | + | chr3_4:62537700-62537719 | Msa0512630:intron | 40.0% | |
| TTGAAAGAGAACATGCCATG+TGG | + | chr3_4:62537969-62537988 | Msa0512630:intron | 40.0% | |
| TGAAAGAGAACATGCCATGT+GGG | + | chr3_4:62537970-62537989 | Msa0512630:intron | 40.0% | |
| TAATTAGAGAAGGCAGTTGG+GGG | - | chr3_4:62538060-62538079 | None:intergenic | 40.0% | |
| ATGCTAACCAAGACAAGTAC+TGG | - | chr3_4:62538114-62538133 | None:intergenic | 40.0% | |
| ! | GCTTGCATACTTTTGCTTTC+TGG | + | chr3_4:62538134-62538153 | Msa0512630:intron | 40.0% |
| ! | TGCATACTTTTGCTTTCTGG+AGG | + | chr3_4:62538137-62538156 | Msa0512630:intron | 40.0% |
| ! | TAGTGTTTTCAAAACCGGAC+CGG | + | chr3_4:62538197-62538216 | Msa0512630:intron | 40.0% |
| AGTGACTCAGTACTTTGACT+GGG | - | chr3_4:62538230-62538249 | None:intergenic | 40.0% | |
| AGTGTACCAGGTTTCAGATT+TGG | + | chr3_4:62538342-62538361 | Msa0512630:intron | 40.0% | |
| GTGTACCAGGTTTCAGATTT+GGG | + | chr3_4:62538343-62538362 | Msa0512630:intron | 40.0% | |
| ! | TTGCCTTTCTCCTGCATTTT+AGG | + | chr3_4:62538388-62538407 | Msa0512630:CDS | 40.0% |
| AGACCTAAAATGCAGGAGAA+AGG | - | chr3_4:62538394-62538413 | None:intergenic | 40.0% | |
| TGAAAGGAGACCTAAAATGC+AGG | - | chr3_4:62538401-62538420 | None:intergenic | 40.0% | |
| CAATATTCATACGGGGTTCA+TGG | - | chr3_4:62538544-62538563 | None:intergenic | 40.0% | |
| !! | CACATTCATTGGTGTCATGT+CGG | - | chr3_4:62538775-62538794 | None:intergenic | 40.0% |
| !!! | TTTTTTTGTTGGCAGTGAGC+AGG | + | chr3_4:62539045-62539064 | Msa0512630:intron | 40.0% |
| AGTGAGCAGGAGTTACATAT+GGG | + | chr3_4:62539058-62539077 | Msa0512630:intron | 40.0% | |
| CTTGTAGCTTAATGTGAGTG+CGG | + | chr3_4:62539209-62539228 | Msa0512630:intron | 40.0% | |
| ! | TAATGTGAGTGCGGTTTTCT+CGG | + | chr3_4:62539218-62539237 | Msa0512630:CDS | 40.0% |
| CAGCATGAATTCTCTCCTAA+TGG | + | chr3_4:62539278-62539297 | Msa0512630:CDS | 40.0% | |
| GTGGTATCAACTACAGTCAT+TGG | - | chr3_4:62539428-62539447 | None:intergenic | 40.0% | |
| ! | ATGACTGTAGTTGATACCAC+TGG | + | chr3_4:62539428-62539447 | Msa0512630:exon | 40.0% |
| ! | GAAAAACTGGTCTAAACCAG+TGG | - | chr3_4:62539447-62539466 | None:intergenic | 40.0% |
| CACTCTCGTAATCCCAAGTT+TGG | + | chr3_4:62535282-62535301 | Msa0512630:intron | 45.0% | |
| AGATGAAAGACTAGGCCTTC+TGG | - | chr3_4:62535618-62535637 | None:intergenic | 45.0% | |
| ! | GCACTTTCTAGTGTCCTTGT+TGG | - | chr3_4:62535650-62535669 | None:intergenic | 45.0% |
| GGTCCTACATTATCAAGTCC+AGG | + | chr3_4:62535695-62535714 | Msa0512630:CDS | 45.0% | |
| ACTTTGGTAGAATGTGGCCT+TGG | - | chr3_4:62535740-62535759 | None:intergenic | 45.0% | |
| GTTCCCTTCATCGAGTAAAG+CGG | + | chr3_4:62535928-62535947 | Msa0512630:CDS | 45.0% | |
| TCAGGTGCAGAGAATGTACA+TGG | + | chr3_4:62535983-62536002 | Msa0512630:CDS | 45.0% | |
| GAAACACCATCAGTAGTTGC+TGG | - | chr3_4:62536268-62536287 | None:intergenic | 45.0% | |
| CTCTTGCATTGAATCACTGC+GGG | - | chr3_4:62536293-62536312 | None:intergenic | 45.0% | |
| ! | TTGCATTTTGTCACGCCGTT+TGG | + | chr3_4:62536689-62536708 | Msa0512630:intron | 45.0% |
| AGTCATTGAAGATGCTTCCG+AGG | + | chr3_4:62536716-62536735 | Msa0512630:intron | 45.0% | |
| ! | GATTTGTTTGGTGGAGCTTG+CGG | + | chr3_4:62536767-62536786 | Msa0512630:CDS | 45.0% |
| ACCAAGACTGTGCAGTAAAG+TGG | + | chr3_4:62536847-62536866 | Msa0512630:CDS | 45.0% | |
| ACCACTTTACTGCACAGTCT+TGG | - | chr3_4:62536851-62536870 | None:intergenic | 45.0% | |
| AACGTATGCCGAACAACAGT+CGG | - | chr3_4:62536960-62536979 | None:intergenic | 45.0% | |
| !! | ATGCTTACTTGTTGGCCTTG+TGG | + | chr3_4:62537113-62537132 | Msa0512630:intron | 45.0% |
| ! | GGTTGTAGTCTAGGGTCATT+AGG | + | chr3_4:62537219-62537238 | Msa0512630:intron | 45.0% |
| TGACTCGTTCAGTGAATACC+AGG | - | chr3_4:62537340-62537359 | None:intergenic | 45.0% | |
| AATTAGAGAAGGCAGTTGGG+GGG | - | chr3_4:62538059-62538078 | None:intergenic | 45.0% | |
| TATACTCTACAGGATCTGGC+AGG | + | chr3_4:62538083-62538102 | Msa0512630:intron | 45.0% | |
| GGATGTACCAGTACTTGTCT+TGG | + | chr3_4:62538104-62538123 | Msa0512630:CDS | 45.0% | |
| ! | TTGCTTTCTGGAGGAACTAC+TGG | + | chr3_4:62538146-62538165 | Msa0512630:intron | 45.0% |
| CAGTGACTCAGTACTTTGAC+TGG | - | chr3_4:62538231-62538250 | None:intergenic | 45.0% | |
| !! | CAGTCAAAGTACTGAGTCAC+TGG | + | chr3_4:62538229-62538248 | Msa0512630:intron | 45.0% |
| TGAGTCACTGGTCAAACCAA+TGG | + | chr3_4:62538241-62538260 | Msa0512630:intron | 45.0% | |
| GAGTCACTGGTCAAACCAAT+GGG | + | chr3_4:62538242-62538261 | Msa0512630:intron | 45.0% | |
| GCAGGAGAAAGGCAATGAAA+TGG | - | chr3_4:62538383-62538402 | None:intergenic | 45.0% | |
| GAAGAAAGCGAGTTTACCCA+TGG | - | chr3_4:62538440-62538459 | None:intergenic | 45.0% | |
| !! | TCAACGATTTTAGGGGCTCA+AGG | - | chr3_4:62538595-62538614 | None:intergenic | 45.0% |
| GAGCCCCTAAAATCGTTGAA+TGG | + | chr3_4:62538596-62538615 | Msa0512630:intron | 45.0% | |
| CAGTGAGCAGGAGTTACATA+TGG | + | chr3_4:62539057-62539076 | Msa0512630:intron | 45.0% | |
| ACAGGATGACAAATGCGAAC+TGG | - | chr3_4:62539097-62539116 | None:intergenic | 45.0% | |
| GACAACCACATCAACTGCAA+AGG | + | chr3_4:62539385-62539404 | Msa0512630:CDS | 45.0% | |
| ! | TGCATCCTTTGCAGTTGATG+TGG | - | chr3_4:62539393-62539412 | None:intergenic | 45.0% |
| !!! | ATTAATTTTTTATCATAAAA+AGG | - | chr3_4:62536390-62536409 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTACT+AGG | + | chr3_4:62537724-62537743 | Msa0512630:intron | 5.0% |
| !! | AAATGAAAAAATATAATTAA+GGG | - | chr3_4:62538496-62538515 | None:intergenic | 5.0% |
| !! | AAAATGAAAAAATATAATTA+AGG | - | chr3_4:62538497-62538516 | None:intergenic | 5.0% |
| GAGTGTCCTCTTCTTCTGAG+AGG | - | chr3_4:62535219-62535238 | None:intergenic | 50.0% | |
| TCAAGTCCAGGTTCCACTAG+AGG | + | chr3_4:62535707-62535726 | Msa0512630:CDS | 50.0% | |
| ! | TTGGTAGAATGTGGCCTTGG+TGG | - | chr3_4:62535737-62535756 | None:intergenic | 50.0% |
| TAAAGCGGCGCATTCGTTAC+CGG | + | chr3_4:62535943-62535962 | Msa0512630:CDS | 50.0% | |
| CATGGAAGACATGTAGAGGG+TGG | + | chr3_4:62536001-62536020 | Msa0512630:CDS | 50.0% | |
| AGACGCCTAGAATCTGTTGC+AGG | - | chr3_4:62536217-62536236 | None:intergenic | 50.0% | |
| TGCAACAGATTCTAGGCGTC+TGG | + | chr3_4:62536216-62536235 | Msa0512630:CDS | 50.0% | |
| AGGGGGAGATACTCTTAGGA+TGG | + | chr3_4:62536791-62536810 | Msa0512630:CDS | 50.0% | |
| !! | AGGATGGACTGCAGTTGCAA+AGG | + | chr3_4:62536807-62536826 | Msa0512630:CDS | 50.0% |
| GACATGTGATGTCTGCAAGC+AGG | + | chr3_4:62536890-62536909 | Msa0512630:CDS | 50.0% | |
| ATGTCTGCAAGCAGGATGTC+CGG | + | chr3_4:62536898-62536917 | Msa0512630:CDS | 50.0% | |
| CTAGTCCTCCGACTGTTGTT+CGG | + | chr3_4:62536949-62536968 | Msa0512630:CDS | 50.0% | |
| TATGCATGCGGGACCAGAAA+AGG | + | chr3_4:62537438-62537457 | Msa0512630:intron | 50.0% | |
| ! | CAAGCCTTTTCCCACTGAGT+GGG | + | chr3_4:62537485-62537504 | Msa0512630:intron | 50.0% |
| ! | AAGCCTTTTCCCACTGAGTG+GGG | + | chr3_4:62537486-62537505 | Msa0512630:intron | 50.0% |
| ATTAGAGAAGGCAGTTGGGG+GGG | - | chr3_4:62538058-62538077 | None:intergenic | 50.0% | |
| ACTTTGACTGGGTCGATGAC+CGG | - | chr3_4:62538219-62538238 | None:intergenic | 50.0% | |
| ! | ATGAAATGGCGAGAGCACGT+GGG | - | chr3_4:62538369-62538388 | None:intergenic | 50.0% |
| ! | AATGAAATGGCGAGAGCACG+TGG | - | chr3_4:62538370-62538389 | None:intergenic | 50.0% |
| ! | GCGCCGCTTTACTCGATGAA+GGG | - | chr3_4:62535934-62535953 | None:intergenic | 55.0% |
| ! | TGCGCCGCTTTACTCGATGA+AGG | - | chr3_4:62535935-62535954 | None:intergenic | 55.0% |
| ! | CCATCAGTAGTTGCTGGCTG+TGG | - | chr3_4:62536262-62536281 | None:intergenic | 55.0% |
| CCACAGCCAGCAACTACTGA+TGG | + | chr3_4:62536259-62536278 | Msa0512630:CDS | 55.0% | |
| ! | TGTTTGGTGGAGCTTGCGGA+AGG | + | chr3_4:62536771-62536790 | Msa0512630:CDS | 55.0% |
| ! | GTTTGGTGGAGCTTGCGGAA+GGG | + | chr3_4:62536772-62536791 | Msa0512630:CDS | 55.0% |
| TTTGGTGGAGCTTGCGGAAG+GGG | + | chr3_4:62536773-62536792 | Msa0512630:CDS | 55.0% | |
| CGGAAGGGGGAGATACTCTT+AGG | + | chr3_4:62536787-62536806 | Msa0512630:CDS | 55.0% | |
| GTATGCCGAACAACAGTCGG+AGG | - | chr3_4:62536957-62536976 | None:intergenic | 55.0% | |
| CCACTCAGTGGGAAAAGGCT+TGG | - | chr3_4:62537487-62537506 | None:intergenic | 55.0% | |
| ! | CCAAGCCTTTTCCCACTGAG+TGG | + | chr3_4:62537484-62537503 | Msa0512630:intron | 55.0% |
| ! | CTTTTCCCACTGAGTGGGGT+CGG | + | chr3_4:62537490-62537509 | Msa0512630:intron | 55.0% |
| TTCCTCTGCCTCTAGTGCTC+TGG | + | chr3_4:62537623-62537642 | Msa0512630:intron | 55.0% | |
| ! | GAGGATAGCCAGAGCACTAG+AGG | - | chr3_4:62537634-62537653 | None:intergenic | 55.0% |
| TTAGAGAAGGCAGTTGGGGG+GGG | - | chr3_4:62538057-62538076 | None:intergenic | 55.0% | |
| ! | GTGGGCCCAAATCTGAAACC+TGG | - | chr3_4:62538351-62538370 | None:intergenic | 55.0% |
| GGCAGTCCTCTAGTGGAACC+TGG | - | chr3_4:62535716-62535735 | None:intergenic | 60.0% | |
| ! | CCTTGGTGGCAGTCCTCTAG+TGG | - | chr3_4:62535723-62535742 | None:intergenic | 60.0% |
| CCACTAGAGGACTGCCACCA+AGG | + | chr3_4:62535720-62535739 | Msa0512630:CDS | 60.0% | |
| TTGGTGGAGCTTGCGGAAGG+GGG | + | chr3_4:62536774-62536793 | Msa0512630:CDS | 60.0% | |
| CGACCCCACTCAGTGGGAAA+AGG | - | chr3_4:62537492-62537511 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCACTCAGT+GGG | - | chr3_4:62537498-62537517 | None:intergenic | 60.0% | |
| ATGTAGCCGACCCCACTCAG+TGG | - | chr3_4:62537499-62537518 | None:intergenic | 60.0% | |
| ACTGAGTGGGGTCGGCTACA+TGG | + | chr3_4:62537498-62537517 | Msa0512630:intron | 60.0% | |
| ! | AGCCAGAGCACTAGAGGCAG+AGG | - | chr3_4:62537628-62537647 | None:intergenic | 60.0% |
| TAGAGAAGGCAGTTGGGGGG+GGG | - | chr3_4:62538056-62538075 | None:intergenic | 60.0% | |
| AGAGAAGGCAGTTGGGGGGG+GGG | - | chr3_4:62538055-62538074 | None:intergenic | 65.0% | |
| GACTGGGTCGATGACCGGTC+CGG | - | chr3_4:62538214-62538233 | None:intergenic | 65.0% | |
| AGAAGGCAGTTGGGGGGGGG+GGG | - | chr3_4:62538053-62538072 | None:intergenic | 70.0% | |
| GAGAAGGCAGTTGGGGGGGG+GGG | - | chr3_4:62538054-62538073 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 62534846 | 62539666 | 62534846 | ID=Msa0512630;Name=Msa0512630 |
| chr3_4 | mRNA | 62534846 | 62539666 | 62534846 | ID=Msa0512630-mRNA-1;Parent=Msa0512630;Name=Msa0512630-mRNA-1;_AED=0.09;_eAED=0.09;_QI=77|0.85|0.87|1|0.57|0.62|8|235|462 |
| chr3_4 | exon | 62534846 | 62534997 | 62534846 | ID=Msa0512630-mRNA-1:exon:15483;Parent=Msa0512630-mRNA-1 |
| chr3_4 | exon | 62535614 | 62536036 | 62535614 | ID=Msa0512630-mRNA-1:exon:15484;Parent=Msa0512630-mRNA-1 |
| chr3_4 | exon | 62536142 | 62536316 | 62536142 | ID=Msa0512630-mRNA-1:exon:15485;Parent=Msa0512630-mRNA-1 |
| chr3_4 | exon | 62536718 | 62537015 | 62536718 | ID=Msa0512630-mRNA-1:exon:15486;Parent=Msa0512630-mRNA-1 |
| chr3_4 | exon | 62538095 | 62538125 | 62538095 | ID=Msa0512630-mRNA-1:exon:15487;Parent=Msa0512630-mRNA-1 |
| chr3_4 | exon | 62538352 | 62538442 | 62538352 | ID=Msa0512630-mRNA-1:exon:15488;Parent=Msa0512630-mRNA-1 |
| chr3_4 | exon | 62539060 | 62539139 | 62539060 | ID=Msa0512630-mRNA-1:exon:15489;Parent=Msa0512630-mRNA-1 |
| chr3_4 | exon | 62539216 | 62539666 | 62539216 | ID=Msa0512630-mRNA-1:exon:15490;Parent=Msa0512630-mRNA-1 |
| chr3_4 | five_prime_UTR | 62534846 | 62534922 | 62534846 | ID=Msa0512630-mRNA-1:five_prime_utr;Parent=Msa0512630-mRNA-1 |
| chr3_4 | CDS | 62534923 | 62534997 | 62534923 | ID=Msa0512630-mRNA-1:cds;Parent=Msa0512630-mRNA-1 |
| chr3_4 | CDS | 62535614 | 62536036 | 62535614 | ID=Msa0512630-mRNA-1:cds;Parent=Msa0512630-mRNA-1 |
| chr3_4 | CDS | 62536142 | 62536316 | 62536142 | ID=Msa0512630-mRNA-1:cds;Parent=Msa0512630-mRNA-1 |
| chr3_4 | CDS | 62536718 | 62537015 | 62536718 | ID=Msa0512630-mRNA-1:cds;Parent=Msa0512630-mRNA-1 |
| chr3_4 | CDS | 62538095 | 62538125 | 62538095 | ID=Msa0512630-mRNA-1:cds;Parent=Msa0512630-mRNA-1 |
| chr3_4 | CDS | 62538352 | 62538442 | 62538352 | ID=Msa0512630-mRNA-1:cds;Parent=Msa0512630-mRNA-1 |
| chr3_4 | CDS | 62539060 | 62539139 | 62539060 | ID=Msa0512630-mRNA-1:cds;Parent=Msa0512630-mRNA-1 |
| chr3_4 | CDS | 62539216 | 62539431 | 62539216 | ID=Msa0512630-mRNA-1:cds;Parent=Msa0512630-mRNA-1 |
| chr3_4 | three_prime_UTR | 62539432 | 62539666 | 62539432 | ID=Msa0512630-mRNA-1:three_prime_utr;Parent=Msa0512630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
