AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0206450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0206450 MtrunA17_Chr2g0304841 90.698 688 60 2 3 689 4 688 0.0 1257
Msa0206450 MtrunA17_Chr4g0074401 43.161 658 296 13 1 651 1 587 3.76e-145 436
Msa0206450 MtrunA17_Chr4g0074411 42.541 677 303 17 1 666 2 603 1.05e-140 425
Msa0206450 MtrunA17_Chr3g0137101 39.769 694 339 15 15 686 6 642 2.55e-137 417
Msa0206450 MtrunA17_Chr1g0149841 43.852 488 222 10 15 496 3 444 2.67e-113 350
Msa0206450 MtrunA17_Chr1g0149851 50.427 351 138 7 15 345 3 337 3.07e-97 310
Msa0206450 MtrunA17_Chr7g0275891 46.582 395 129 13 15 392 3 332 6.38e-93 292
Msa0206450 MtrunA17_Chr4g0067981 45.526 380 174 7 15 382 29 387 8.59e-91 297
Msa0206450 MtrunA17_Chr1g0161431 49.508 305 137 5 17 317 11 302 7.49e-86 282
Msa0206450 MtrunA17_Chr7g0275401 55.385 260 105 3 15 274 3 251 1.58e-84 268
Msa0206450 MtrunA17_Chr2g0294911 42.896 366 173 8 13 375 25 357 2.38e-84 278
Msa0206450 MtrunA17_Chr8g0376881 52.692 260 107 3 14 272 22 266 3.72e-80 265
Msa0206450 MtrunA17_Chr3g0123131 54.086 257 104 3 17 272 13 256 3.97e-79 263
Msa0206450 MtrunA17_Chr4g0074421 57.143 203 70 3 67 269 2 187 1.31e-63 209
Msa0206450 MtrunA17_Chr1g0149831 56.784 199 71 3 76 274 1 184 1.68e-63 210
Msa0206450 MtrunA17_Chr3g0134481 65.909 132 45 0 11 142 2 133 1.01e-53 182
Msa0206450 MtrunA17_Chr3g0134481 62.264 53 20 0 214 266 131 183 2.06e-16 78.2
Msa0206450 MtrunA17_Chr4g0009851 36.822 258 123 4 17 274 11 228 1.75e-47 170
Msa0206450 MtrunA17_Chr4g0009901 34.630 257 128 4 17 273 10 226 1.48e-43 158
Msa0206450 MtrunA17_Chr3g0134461 63.433 134 48 1 11 143 2 135 4.17e-40 145
Msa0206450 MtrunA17_Chr3g0134461 67.797 59 19 0 206 264 134 192 1.52e-18 84.3
Msa0206450 MtrunA17_Chr4g0009981 35.211 213 99 3 62 274 2 175 5.20e-36 136
Msa0206450 MtrunA17_Chr6g0471041 32.331 266 138 5 11 275 8 232 2.90e-35 138
Msa0206450 MtrunA17_Chr8g0391911 30.588 255 149 5 17 264 9 242 4.88e-28 113
Msa0206450 MtrunA17_Chr8g0350761 27.843 255 174 4 20 267 20 271 4.29e-26 112
Msa0206450 MtrunA17_Chr3g0127941 38.095 126 73 2 21 142 56 180 6.56e-24 107
Msa0206450 MtrunA17_Chr7g0276361 38.356 146 77 3 18 153 11 153 9.10e-24 106
Msa0206450 MtrunA17_Chr4g0031961 60.526 76 30 0 197 272 113 188 1.20e-23 102
Msa0206450 MtrunA17_Chr6g0473731 35.625 160 70 2 112 271 25 151 2.50e-23 103
Msa0206450 MtrunA17_Chr1g0181811 39.344 122 71 2 21 139 85 206 3.89e-23 104
Msa0206450 MtrunA17_Chr4g0030271 40.945 127 71 2 17 139 84 210 4.05e-23 104
Msa0206450 MtrunA17_Chr7g0255711 59.155 71 29 0 202 272 78 148 8.11e-22 96.7
Msa0206450 MtrunA17_Chr8g0345901 34.932 146 84 2 23 157 38 183 7.28e-21 97.4
Msa0206450 MtrunA17_Chr8g0383961 33.094 139 93 0 9 147 6 144 9.47e-21 92.8
Msa0206450 MtrunA17_Chr4g0009991 32.258 155 65 2 110 264 2 116 7.83e-20 85.9
Msa0206450 MtrunA17_Chr3g0091641 28.251 223 147 4 5 218 10 228 1.67e-19 92.8
Msa0206450 MtrunA17_Chr4g0011071 28.571 175 86 3 67 241 39 174 1.21e-18 84.3
Msa0206450 MtrunA17_Chr4g0061021 31.373 153 100 2 5 154 19 169 1.43e-18 90.1
Msa0206450 MtrunA17_Chr6g0456631 31.579 133 88 2 15 145 7 138 5.16e-18 82.0
Msa0206450 MtrunA17_Chr4g0054981 56.923 65 28 0 211 275 306 370 6.97e-18 87.8
Msa0206450 MtrunA17_Chr4g0054981 32.800 125 78 4 17 139 14 134 6.39e-11 65.5
Msa0206450 MtrunA17_Chr5g0400241 35.484 155 81 5 211 360 307 447 1.78e-17 86.3
Msa0206450 MtrunA17_Chr5g0400241 36.508 126 72 5 17 139 14 134 9.75e-13 71.2
Msa0206450 MtrunA17_Chr2g0324891 47.436 78 41 0 194 271 140 217 2.96e-17 84.7
Msa0206450 MtrunA17_Chr4g0040481 56.452 62 27 0 210 271 153 214 4.52e-17 84.3
Msa0206450 MtrunA17_Chr6g0461641 57.627 59 24 1 211 268 38 96 2.58e-15 78.6
Msa0206450 MtrunA17_Chr7g0274471 56.522 69 28 2 213 279 216 284 4.17e-15 78.2
Msa0206450 MtrunA17_Chr2g0321461 57.627 59 24 1 211 268 41 99 4.58e-15 77.8
Msa0206450 MtrunA17_Chr1g0190301 58.621 58 23 1 211 267 171 228 7.94e-15 77.0
Msa0206450 MtrunA17_Chr1g0175081 53.333 60 27 1 217 275 24 83 1.16e-14 70.5
Msa0206450 MtrunA17_Chr7g0261911 58.621 58 23 1 211 267 258 315 1.64e-14 76.6
Msa0206450 MtrunA17_Chr4g0062921 49.231 65 32 1 212 275 232 296 1.97e-14 76.3
Msa0206450 MtrunA17_Chr1g0198601 35.897 117 68 3 208 319 204 318 2.32e-14 75.5
Msa0206450 MtrunA17_Chr5g0417521 54.237 59 26 1 211 268 11 69 2.40e-14 75.1
Msa0206450 MtrunA17_Chr5g0422621 32.886 149 82 6 205 348 188 323 4.88e-14 74.3
Msa0206450 MtrunA17_Chr4g0045361 40.566 106 48 4 212 310 271 368 7.31e-14 74.3
Msa0206450 MtrunA17_Chr7g0256551 31.579 171 86 5 21 170 9 169 2.77e-13 70.1
Msa0206450 MtrunA17_Chr2g0288601 53.333 60 27 1 214 272 70 129 6.47e-13 66.2
Msa0206450 MtrunA17_Chr6g0469321 70.455 44 13 0 231 274 70 113 7.07e-13 67.4
Msa0206450 MtrunA17_Chr5g0409731 54.545 55 24 1 215 268 25 79 1.11e-12 69.3
Msa0206450 MtrunA17_Chr1g0197171 52.542 59 27 1 211 268 40 98 1.53e-12 68.9
Msa0206450 MtrunA17_Chr2g0290991 44.595 74 36 2 200 268 20 93 4.43e-12 67.8
Msa0206450 MtrunA17_Chr7g0243081 54.545 55 24 1 214 267 70 124 5.30e-12 67.8
Msa0206450 MtrunA17_Chr5g0402631 50.000 62 30 1 212 272 211 272 5.35e-12 67.8
Msa0206450 MtrunA17_Chr4g0042451 49.153 59 29 1 211 268 13 71 6.04e-12 67.8
Msa0206450 MtrunA17_Chr7g0258551 57.407 54 22 1 215 267 212 265 6.68e-12 67.8
Msa0206450 MtrunA17_Chr7g0254981 54.545 55 24 1 215 268 50 104 7.03e-12 66.6
Msa0206450 MtrunA17_Chr2g0320231 54.545 55 24 1 214 267 96 150 1.11e-11 67.0
Msa0206450 MtrunA17_Chr1g0175091 56.364 55 23 1 215 268 258 312 1.25e-11 67.4
Msa0206450 MtrunA17_Chr8g0379121 52.727 55 25 1 214 267 110 164 1.42e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0206450 AT2G25180.1 45.476 431 202 10 13 430 9 419 1.74e-104 331
Msa0206450 AT5G58080.1 42.188 512 234 13 10 495 7 482 1.54e-96 311
Msa0206450 AT4G31920.1 45.412 425 166 11 13 430 9 374 3.40e-95 305
Msa0206450 AT3G16857.2 32.060 733 378 22 5 685 21 685 3.92e-92 301
Msa0206450 AT3G16857.1 35.614 570 250 16 5 505 21 542 1.53e-90 296
Msa0206450 AT1G67710.1 55.039 258 99 4 18 272 8 251 7.62e-78 258
Msa0206450 AT3G16857.3 31.085 682 350 22 56 685 2 615 9.34e-76 256
Msa0206450 AT2G01760.1 47.601 271 115 5 15 274 5 259 3.18e-71 236
Msa0206450 AT2G01760.2 43.144 299 115 6 15 274 5 287 3.26e-65 221
Msa0206450 AT1G67710.2 54.500 200 74 4 76 272 1 186 8.82e-53 189
Msa0206450 AT2G01760.3 48.571 210 81 5 76 274 1 194 7.30e-50 177
Msa0206450 AT5G49240.1 37.097 248 143 2 17 264 38 272 6.12e-44 160
Msa0206450 AT3G62670.1 38.211 246 124 7 36 275 54 277 2.39e-41 156
Msa0206450 AT1G67710.3 49.444 180 74 4 96 272 12 177 1.93e-38 149
Msa0206450 AT1G49190.1 29.446 343 194 9 3 335 16 320 3.96e-37 144
Msa0206450 AT5G07210.2 29.697 330 206 10 19 328 14 337 7.29e-33 134
Msa0206450 AT5G07210.1 28.994 338 206 11 19 328 14 345 2.33e-30 127
Msa0206450 AT2G27070.1 29.290 338 198 9 19 328 14 338 5.18e-30 125
Msa0206450 AT5G59570.2 52.688 93 44 0 180 272 106 198 1.91e-25 107
Msa0206450 AT5G59570.1 52.688 93 44 0 180 272 106 198 1.91e-25 107
Msa0206450 AT5G24470.1 38.194 144 80 4 11 146 36 178 4.38e-25 110
Msa0206450 AT2G46790.3 39.024 123 70 2 21 139 37 158 8.85e-24 105
Msa0206450 AT2G46790.1 39.024 123 70 2 21 139 37 158 1.07e-23 105
Msa0206450 AT1G49190.2 35.507 138 89 0 3 140 16 153 1.47e-23 106
Msa0206450 AT5G05090.1 58.667 75 30 1 199 272 64 138 3.69e-23 100
Msa0206450 AT3G10760.1 56.098 82 35 1 192 272 81 162 1.01e-22 100
Msa0206450 AT3G46640.2 69.492 59 18 0 214 272 143 201 1.95e-22 99.4
Msa0206450 AT3G46640.1 69.492 59 18 0 214 272 143 201 1.95e-22 99.4
Msa0206450 AT3G46640.3 58.904 73 30 0 200 272 129 201 2.33e-22 99.0
Msa0206450 AT2G40970.1 55.844 77 34 0 196 272 86 162 2.52e-22 97.4
Msa0206450 AT5G60100.7 37.008 127 76 2 17 139 59 185 3.78e-21 97.1
Msa0206450 AT5G60100.6 37.008 127 76 2 17 139 59 185 3.78e-21 97.1
Msa0206450 AT5G60100.4 37.008 127 76 2 17 139 59 185 3.78e-21 97.1
Msa0206450 AT5G60100.5 37.008 127 76 2 17 139 59 185 6.36e-21 97.1
Msa0206450 AT5G60100.3 37.008 127 76 2 17 139 59 185 6.36e-21 97.1
Msa0206450 AT5G60100.1 37.008 127 76 2 17 139 59 185 6.36e-21 97.1
Msa0206450 AT5G02810.1 37.705 122 73 1 21 139 78 199 7.68e-21 97.8
Msa0206450 AT5G60100.2 37.008 127 76 2 17 139 59 185 1.31e-20 96.3
Msa0206450 AT5G61380.1 35.075 134 82 2 11 141 11 142 1.05e-19 94.0
Msa0206450 AT5G44190.2 62.121 66 23 1 206 271 140 203 3.90e-19 90.1
Msa0206450 AT5G44190.1 62.121 66 23 1 206 271 140 203 4.67e-19 90.5
Msa0206450 AT1G68210.1 25.475 263 179 4 21 267 13 274 6.24e-19 92.0
Msa0206450 AT4G18020.8 39.669 121 55 1 173 275 236 356 3.75e-16 82.4
Msa0206450 AT4G18020.11 39.669 121 55 1 173 275 236 356 3.75e-16 82.4
Msa0206450 AT4G18020.4 39.669 121 55 1 173 275 236 356 3.75e-16 82.4
Msa0206450 AT4G18020.5 39.669 121 55 1 173 275 236 356 3.75e-16 82.4
Msa0206450 AT4G18020.10 39.669 121 55 1 173 275 236 356 3.75e-16 82.4
Msa0206450 AT4G18020.7 39.669 121 55 1 173 275 236 356 3.75e-16 82.4
Msa0206450 AT2G20570.1 59.322 59 24 0 213 271 151 209 4.00e-16 81.6
Msa0206450 AT4G18020.3 39.669 121 55 1 173 275 236 356 5.08e-16 82.0
Msa0206450 AT4G18020.2 39.669 121 55 1 173 275 236 356 5.08e-16 82.0
Msa0206450 AT4G18020.1 39.669 121 55 1 173 275 236 356 5.08e-16 82.0
Msa0206450 AT4G18020.6 39.669 121 55 1 173 275 236 356 5.08e-16 82.0
Msa0206450 AT4G18020.9 39.669 121 55 1 173 275 236 356 5.08e-16 82.0
Msa0206450 AT2G20570.2 61.818 55 21 0 217 271 171 225 1.86e-15 79.7
Msa0206450 AT3G04030.1 57.627 59 24 1 211 268 41 99 5.58e-15 77.8
Msa0206450 AT3G04030.3 57.627 59 24 1 211 268 41 99 6.04e-15 77.8
Msa0206450 AT5G18240.2 57.627 59 24 1 211 268 41 99 1.07e-14 77.0
Msa0206450 AT5G18240.3 57.627 59 24 1 211 268 41 99 1.07e-14 77.0
Msa0206450 AT5G18240.5 57.627 59 24 1 211 268 41 99 1.21e-14 77.0
Msa0206450 AT5G18240.1 57.627 59 24 1 211 268 41 99 1.24e-14 77.0
Msa0206450 AT5G18240.4 57.627 59 24 1 211 268 41 99 1.24e-14 77.0
Msa0206450 AT2G03500.1 50.769 65 31 1 212 275 230 294 1.87e-14 76.6
Msa0206450 AT1G25550.1 38.983 118 62 4 212 324 206 318 3.09e-14 75.1
Msa0206450 AT3G04030.2 53.448 58 27 0 211 268 41 98 7.68e-14 74.3
Msa0206450 AT2G42660.1 47.619 84 40 3 216 298 51 131 1.30e-13 72.0
Msa0206450 AT5G45580.1 56.364 55 23 1 215 268 7 61 4.74e-13 70.5
Msa0206450 AT5G45580.2 56.364 55 23 1 215 268 23 77 5.29e-13 70.5
Msa0206450 AT1G68670.1 33.333 132 77 5 212 334 212 341 2.37e-12 69.3
Msa0206450 AT4G28610.1 49.231 65 32 1 215 278 225 289 2.38e-12 70.1
Msa0206450 AT4G37180.1 43.750 80 38 2 210 282 199 278 3.17e-12 68.9
Msa0206450 AT4G37180.2 43.750 80 38 2 210 282 206 285 3.84e-12 68.9
Msa0206450 AT3G25790.1 31.405 121 72 3 219 328 200 320 5.53e-12 68.6
Msa0206450 AT5G06800.3 50.000 68 33 1 202 268 179 246 5.85e-12 67.4
Msa0206450 AT4G04605.1 54.545 55 24 1 214 267 13 67 1.03e-11 65.5
Msa0206450 AT5G29000.4 57.407 54 22 1 215 267 231 284 1.11e-11 67.0
Msa0206450 AT3G04450.3 55.556 54 23 1 215 267 238 291 1.33e-11 66.6
Msa0206450 AT5G29000.1 51.429 70 30 2 215 283 188 254 1.49e-11 67.0
Msa0206450 AT5G29000.3 51.429 70 30 2 215 283 188 254 1.49e-11 67.0
Msa0206450 AT2G01060.1 54.545 55 24 1 215 268 15 69 1.56e-11 66.2
Msa0206450 AT5G29000.2 57.407 54 22 1 215 267 231 284 1.73e-11 67.4
Msa0206450 AT3G04450.1 55.556 54 23 1 215 267 238 291 1.93e-11 67.4
Msa0206450 AT1G49560.1 43.210 81 42 2 214 290 191 271 2.04e-11 66.2
Msa0206450 AT3G04450.4 55.556 54 23 1 215 267 198 251 2.08e-11 67.0
Msa0206450 AT3G04450.2 55.556 54 23 1 215 267 198 251 2.08e-11 67.0
Msa0206450 AT5G06800.2 50.000 68 33 1 202 268 179 246 2.54e-11 66.6
Msa0206450 AT5G06800.1 50.000 68 33 1 202 268 179 246 2.73e-11 66.2
Msa0206450 AT2G38300.1 52.727 55 25 1 214 267 53 107 3.22e-11 65.9
Msa0206450 AT3G13040.3 53.571 56 25 1 214 268 240 295 3.38e-11 66.6
Msa0206450 AT3G13040.1 53.571 56 25 1 214 268 240 295 3.38e-11 66.6
Msa0206450 AT3G13040.2 53.571 56 25 1 214 268 240 295 3.38e-11 66.6
Msa0206450 AT2G06020.1 35.115 131 62 4 170 295 44 156 4.03e-11 65.1
Msa0206450 AT3G56380.2 32.061 131 75 2 21 137 20 150 4.81e-11 62.0
Msa0206450 AT2G40260.1 52.727 55 25 1 214 267 81 135 6.00e-11 65.5
Msa0206450 AT1G13300.1 41.892 74 42 1 200 272 166 239 6.62e-11 65.1

Find 189 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGCATCTCGGCACATTTC+TGG 0.123885 2_1:+35742391 None:intergenic
AATAATAATGCAGCTTTCTT+AGG 0.190771 2_1:+35745501 None:intergenic
TTGCTTCCACCAGAAATATT+AGG 0.214532 2_1:+35744094 None:intergenic
GTTGGATATGTTGAGGGTTT+TGG 0.226504 2_1:-35742038 Msa0206450:CDS
TCCTGTGTTCATTCTCTCTA+AGG 0.252203 2_1:-35740031 Msa0206450:three_prime_UTR
GATAAGGTCCCTAATATTTC+TGG 0.257219 2_1:-35744103 Msa0206450:CDS
TGCACCCATTATGTCTTCTA+AGG 0.258237 2_1:+35742013 None:intergenic
AAGCTTGAGCTTTGATTTGC+AGG 0.261012 2_1:+35742899 None:intergenic
GACGAGAATTTCTCAACTTC+GGG 0.287871 2_1:+35742116 None:intergenic
TTCTGTTGGATCTGCTTCCT+TGG 0.307813 2_1:-35742657 Msa0206450:CDS
ACAAATTTCTTATGCAAATC+AGG 0.313939 2_1:+35743899 None:intergenic
TGAAGGGACGACTCGTGTTT+TGG 0.320959 2_1:+35742288 None:intergenic
ATATAGACTCTATCTGAAAA+AGG 0.324190 2_1:-35743182 Msa0206450:CDS
ATTTCTCAACTTCGGGGTAC+TGG 0.340831 2_1:+35742123 None:intergenic
ATTTCCTGCTAGTGCTTTGC+CGG 0.341449 2_1:-35742543 Msa0206450:CDS
AGATGCCAAGATGGCTTGAT+TGG 0.342606 2_1:-35742377 Msa0206450:CDS
TACTAGCATGGTTGCTGGAC+TGG 0.346162 2_1:-35743146 Msa0206450:CDS
TGCTTCCACCAGAAATATTA+GGG 0.349156 2_1:+35744095 None:intergenic
CACCATTGTTTAGGTTAGAT+TGG 0.351569 2_1:+35742849 None:intergenic
GTTATGCTCCGCGACAAAAC+TGG 0.353541 2_1:-35742334 Msa0206450:CDS
CCATGGTGCATGTGACTATC+TGG 0.354596 2_1:-35744224 Msa0206450:CDS
CTTCAGACTTTCAAGATAGT+AGG 0.356157 2_1:-35742775 Msa0206450:CDS
TACCAGTTGCACCATTGTTT+AGG 0.365444 2_1:+35742840 None:intergenic
ACAGTGCTGATCGGAATAAA+AGG 0.366820 2_1:-35744054 Msa0206450:CDS
TATTATTTCCAATTTCGAAT+AGG 0.373342 2_1:+35745536 None:intergenic
TTATCTTGTTCTAGTGTTGT+CGG 0.373558 2_1:-35744284 Msa0206450:intron
AACCTAAACAATGGTGCAAC+TGG 0.377336 2_1:-35742842 Msa0206450:CDS
ATTAGGGACCTTATCCTCAT+TGG 0.379637 2_1:+35744111 None:intergenic
CACAATCACTGCTGCTTTGG+AGG 0.379911 2_1:-35742417 Msa0206450:CDS
TCTGTTGGATCTGCTTCCTT+GGG 0.381102 2_1:-35742656 Msa0206450:CDS
GGAAGCCTTGTTATCATCCT+TGG 0.385654 2_1:+35744132 None:intergenic
ATGAAATAAACTCCAGAGAT+AGG 0.391276 2_1:+35740271 None:intergenic
AAATGTAGCAAGCCATTTGC+AGG 0.393120 2_1:-35743666 Msa0206450:intron
CTAAGCTCTTCAAGTCGAAC+AGG 0.403595 2_1:+35744196 None:intergenic
AAACACAATCACTGCTGCTT+TGG 0.405385 2_1:-35742420 Msa0206450:CDS
AATCAAATGCATGATCCAAC+AGG 0.405727 2_1:+35740343 None:intergenic
TTTGGCACCTCAACCAGATC+TGG 0.406957 2_1:-35743070 Msa0206450:CDS
GAGAGTGAAGGGAGTGCAGA+TGG 0.407661 2_1:-35743971 Msa0206450:CDS
TATCTTGTTCTAGTGTTGTC+GGG 0.408272 2_1:-35744283 Msa0206450:intron
GCTTGCGATCCTTCCAGATC+TGG 0.414334 2_1:+35743057 None:intergenic
AACAAATAATTAAAGTCAAA+GGG 0.417835 2_1:-35745457 Msa0206450:five_prime_UTR
ATAATCGGTGTAGTGAAAAC+TGG 0.418658 2_1:-35742589 Msa0206450:CDS
TGGATTTAAGTTGCTTGAAT+TGG 0.418723 2_1:-35744441 Msa0206450:CDS
GGAAACAGAAACATTACTAT+TGG 0.419569 2_1:-35742635 Msa0206450:CDS
CCTCATCTTCTCCAACTTGT+AGG 0.419938 2_1:+35742067 None:intergenic
GCAGTTACTACAGCTACTAA+TGG 0.421788 2_1:-35744545 Msa0206450:intron
CTCAAAACATCAACAACTCC+TGG 0.422296 2_1:-35742925 Msa0206450:CDS
GTTTGAGACTTGATTAGAAC+TGG 0.423035 2_1:+35742745 None:intergenic
TTCCTTGCAACAACAGATGA+TGG 0.430350 2_1:+35742723 None:intergenic
TGGAACCTTAGAAGACATAA+TGG 0.430422 2_1:-35742018 Msa0206450:CDS
CAAGGCTTCCAATGAGGATA+AGG 0.433857 2_1:-35744119 Msa0206450:CDS
TAATGGGTGCAATAGTCAAA+AGG 0.436630 2_1:-35742001 Msa0206450:CDS
TGTTAGCGATAAGAGGGCTT+TGG 0.437040 2_1:+35742465 None:intergenic
CTTCGGATGAGTGGAATAGA+TGG 0.438392 2_1:-35743103 Msa0206450:CDS
TTCTTATTTCATTAATGGGA+TGG 0.440165 2_1:-35740166 Msa0206450:three_prime_UTR
CCTGTGTTCATTCTCTCTAA+GGG 0.443163 2_1:-35740030 Msa0206450:three_prime_UTR
CATCATACTAGCATGGTTGC+TGG 0.444803 2_1:-35743151 Msa0206450:CDS
TTGAAACTTACTCCTATCTC+TGG 0.445248 2_1:-35740283 Msa0206450:three_prime_UTR
TGGAAGCAATCAGAACATAT+TGG 0.447324 2_1:-35744080 Msa0206450:CDS
GGGATACAGTGATACAAGTA+TGG 0.449701 2_1:-35744263 Msa0206450:CDS
AATTCCCAATCAAGCCATCT+TGG 0.450564 2_1:+35742372 None:intergenic
TTTGCTGCAAAGCAAGAAGA+AGG 0.454362 2_1:+35740117 None:intergenic
AACTTAAATCCATCCATGTC+AGG 0.455967 2_1:+35744452 None:intergenic
GGAACCTTAGAAGACATAAT+GGG 0.455999 2_1:-35742017 Msa0206450:CDS
AAAGCACTAGCAGGAAATTC+AGG 0.456039 2_1:+35742548 None:intergenic
TGAATTGGTAGGACTTGAAA+TGG 0.456042 2_1:-35744426 Msa0206450:CDS
AAACAAATAATTAAAGTCAA+AGG 0.456645 2_1:-35745458 Msa0206450:five_prime_UTR
TGATACAAGTATGGTATTCA+AGG 0.457007 2_1:-35744254 Msa0206450:CDS
GCCAAGACTTTGAGACAAGT+TGG 0.461455 2_1:+35745193 None:intergenic
ACTGGACTGTTAGCGATAAG+AGG 0.464251 2_1:+35742458 None:intergenic
ACTAGCATGGTTGCTGGACT+GGG 0.464924 2_1:-35743145 Msa0206450:CDS
TTGAAGAGCTTAGAAACATA+TGG 0.466760 2_1:-35744186 Msa0206450:CDS
CTTGAGCTGATGAATATTGA+AGG 0.466769 2_1:-35743701 Msa0206450:CDS
TCTTATTTCATTAATGGGAT+GGG 0.467227 2_1:-35740165 Msa0206450:three_prime_UTR
GCAAGAACACGCATACCAAC+AGG 0.467353 2_1:+35745229 None:intergenic
TGTCGCGGAGCATAACTTGA+AGG 0.467950 2_1:+35742341 None:intergenic
CTTCAATCCTTTGAACTCAC+AGG 0.468279 2_1:-35742270 Msa0206450:CDS
CCAAGACTTTGAGACAAGTT+GGG 0.470214 2_1:+35745194 None:intergenic
AGAAGAAACCTCGTGTGGTT+TGG 0.471370 2_1:-35743925 Msa0206450:CDS
CCTCTCATGTTCAAGCCGGC+TGG 0.473952 2_1:+35742983 None:intergenic
TGACGAGAATTTCTCAACTT+CGG 0.474747 2_1:+35742115 None:intergenic
ATCAAGCCATCTTGGCATCT+CGG 0.475852 2_1:+35742380 None:intergenic
TTAGATTGGTTAAGCTCGGT+TGG 0.477468 2_1:+35742863 None:intergenic
GTGGTAATGATTCTTACCTT+CGG 0.478612 2_1:-35743120 Msa0206450:CDS
GTCAGAAATCAGTCTTCTGT+TGG 0.479269 2_1:-35742671 Msa0206450:CDS
AAGATGATGAAGAGAGTGAA+GGG 0.479274 2_1:-35743982 Msa0206450:CDS
GCTTTGATTTGCAGGAATCC+AGG 0.479427 2_1:+35742907 None:intergenic
CTGTGAGTTCAAAGGATTGA+AGG 0.479684 2_1:+35742271 None:intergenic
TTTCTCAACTTCGGGGTACT+GGG 0.482057 2_1:+35742124 None:intergenic
TTATTATTGTATCTAGAGAA+AGG 0.482587 2_1:+35740081 None:intergenic
CAGCAACCATGCTAGTATGA+TGG 0.485179 2_1:+35743152 None:intergenic
TTTCCAGACGAAAAGTCAAC+TGG 0.489789 2_1:+35742440 None:intergenic
CGAGGTTTCTTCTGTGATGA+CGG 0.491161 2_1:+35743935 None:intergenic
GATGCCAAGATGGCTTGATT+GGG 0.492450 2_1:-35742376 Msa0206450:CDS
TCCCAAGTTGGATATGTTGA+GGG 0.496240 2_1:-35742044 Msa0206450:CDS
AACCCTCAACATATCCAACT+TGG 0.496341 2_1:+35742042 None:intergenic
ATCAAAGGAGAGATGAAGAT+GGG 0.500012 2_1:-35745267 Msa0206450:CDS
GCAAATTGAGATGACATTGA+TGG 0.500991 2_1:-35740392 Msa0206450:CDS
TAGGTTAGATTGGTTAAGCT+CGG 0.501769 2_1:+35742859 None:intergenic
GTTTGTGCTGTTAATCAACT+TGG 0.503058 2_1:-35743878 Msa0206450:CDS
ATGGTTGCTGGACTGGGCGG+TGG 0.508241 2_1:-35743139 Msa0206450:CDS
TTCAGACTTTCAAGATAGTA+GGG 0.510320 2_1:-35742774 Msa0206450:CDS
AACAGAAACATTACTATTGG+CGG 0.510655 2_1:-35742632 Msa0206450:CDS
AGCAACCATGCTAGTATGAT+GGG 0.510988 2_1:+35743153 None:intergenic
TTTAAGTTGCTTGAATTGGT+AGG 0.511254 2_1:-35744437 Msa0206450:CDS
TTCTGATTCAGCAAGAATCC+AGG 0.516369 2_1:-35740318 Msa0206450:three_prime_UTR
AGAATTTGTCAATGCCCTAC+TGG 0.521387 2_1:+35742241 None:intergenic
AATCAAAGGAGAGATGAAGA+TGG 0.521500 2_1:-35745268 Msa0206450:CDS
ATAGATGGATATGCAGACTT+TGG 0.523223 2_1:-35743088 Msa0206450:CDS
CCCAACTTGTCTCAAAGTCT+TGG 0.525945 2_1:-35745194 Msa0206450:CDS
TTATGCTCCGCGACAAAACT+GGG 0.527456 2_1:-35742333 Msa0206450:CDS
TTAAATCAAATAGATTCCAC+TGG 0.528119 2_1:-35742809 Msa0206450:CDS
TCACAACAGACACACAATGC+AGG 0.528194 2_1:-35742698 Msa0206450:CDS
AATAATGCAGCTTTCTTAGG+AGG 0.529899 2_1:+35745504 None:intergenic
GAAGATGATGAAGAGAGTGA+AGG 0.530545 2_1:-35743983 Msa0206450:CDS
GTCCCAAGTTGGATATGTTG+AGG 0.530635 2_1:-35742045 Msa0206450:CDS
AAGGAAGGAGCAAGATGAGG+AGG 0.530715 2_1:-35744020 Msa0206450:CDS
CTCACAGGTTTGTTCCAGTA+GGG 0.532258 2_1:-35742255 Msa0206450:CDS
CACGCATACCAACAGGAAAA+CGG 0.532394 2_1:+35745236 None:intergenic
AGATGGGTGTGGAGAATCAA+AGG 0.532717 2_1:-35745282 Msa0206450:CDS
AATGGGTGCAATAGTCAAAA+GGG 0.534269 2_1:-35742000 Msa0206450:intron
CTTGCTGAATGCAAATATCA+TGG 0.534603 2_1:-35745163 Msa0206450:intron
AAACTGGGCAGAAAATAAAC+CGG 0.545815 2_1:-35742318 Msa0206450:CDS
CAAGAATAAAGACCTGCAAA+TGG 0.545943 2_1:+35743654 None:intergenic
CACGAATGATGCCTACAAGT+TGG 0.548868 2_1:-35742078 Msa0206450:CDS
ATAAAAGGCTCGGTAAAAGA+AGG 0.549420 2_1:-35744039 Msa0206450:CDS
AATGCAGCTTTCTTAGGAGG+AGG 0.550920 2_1:+35745507 None:intergenic
GAGGTTTCTTCTGTGATGAC+GGG 0.558825 2_1:+35743936 None:intergenic
CAAAGCTCAAGCTTATTACA+TGG 0.559367 2_1:-35742890 Msa0206450:CDS
GATTCTTACCTTCGGATGAG+TGG 0.560817 2_1:-35743112 Msa0206450:CDS
CATACCGGCAAAGCACTAGC+AGG 0.561071 2_1:+35742539 None:intergenic
AAGAAGGAAGGAGCAAGATG+AGG 0.564374 2_1:-35744023 Msa0206450:CDS
CTACCGAAAACTCCGCTCGA+TGG 0.564638 2_1:+35743016 None:intergenic
TGTATGAACTTACTGATGAC+AGG 0.566085 2_1:+35744398 None:intergenic
CAGATAGTCACATGCACCAT+GGG 0.568320 2_1:+35744225 None:intergenic
AATTCCTCTCATGTTCAAGC+CGG 0.569294 2_1:+35742979 None:intergenic
TGTTATGATGCATACCCTGT+TGG 0.570787 2_1:-35740358 Msa0206450:CDS
CTGTGTTCATTCTCTCTAAG+GGG 0.571198 2_1:-35740029 Msa0206450:three_prime_UTR
AACCATCATCTGTTGTTGCA+AGG 0.571223 2_1:-35742725 Msa0206450:CDS
GATACAAGTATGGTATTCAA+GGG 0.580166 2_1:-35744253 Msa0206450:CDS
CTGGACTGTTAGCGATAAGA+GGG 0.580850 2_1:+35742459 None:intergenic
AGTAATGTTTCTGTTTCCCA+AGG 0.584116 2_1:+35742640 None:intergenic
TAATGTTATTGAGAGGCAGT+TGG 0.591128 2_1:+35742498 None:intergenic
GTGGCTATGCCTGACATGGA+TGG 0.592957 2_1:-35744461 Msa0206450:CDS
GATCCTTCCAGATCTGGTTG+AGG 0.592986 2_1:+35743063 None:intergenic
ACCCTCAACATATCCAACTT+GGG 0.593353 2_1:+35742043 None:intergenic
GAACAAACCTGTGAGTTCAA+AGG 0.594050 2_1:+35742263 None:intergenic
GGGGTACTGGGCAACTGACG+TGG 0.594340 2_1:+35742136 None:intergenic
TTGAGCTGATGAATATTGAA+GGG 0.595042 2_1:-35743700 Msa0206450:CDS
ACTCCGCTCGATGGATATGA+CGG 0.596427 2_1:+35743025 None:intergenic
TAGCCACATCACTGATAACC+AGG 0.596968 2_1:+35744477 None:intergenic
CACAACAGACACACAATGCA+GGG 0.597049 2_1:-35742697 Msa0206450:CDS
TTATTGAAAGACTTGCATAC+CGG 0.597636 2_1:+35742524 None:intergenic
AATGTGCCGAGATGCCAAGA+TGG 0.600462 2_1:-35742386 Msa0206450:CDS
AGGGAGTGCAGATGGAGATG+AGG 0.602885 2_1:-35743963 Msa0206450:CDS
AAGGTCCCTAATATTTCTGG+TGG 0.603122 2_1:-35744100 Msa0206450:CDS
AAAGCAGTAATGTTATTGAG+AGG 0.604446 2_1:+35742491 None:intergenic
GAGAAGATGAGGTCCCAAGT+TGG 0.610844 2_1:-35742056 Msa0206450:CDS
ACTCACAGGTTTGTTCCAGT+AGG 0.610848 2_1:-35742256 Msa0206450:CDS
CATCTATTCCACTCATCCGA+AGG 0.612751 2_1:+35743104 None:intergenic
TGTGAGTTCAAAGGATTGAA+GGG 0.613107 2_1:+35742272 None:intergenic
TATTGGAGAACAGTGCTGAT+CGG 0.614955 2_1:-35744063 Msa0206450:CDS
GTATTCAAGGGTGTTACCCA+TGG 0.618028 2_1:-35744241 Msa0206450:CDS
CCAGATAGTCACATGCACCA+TGG 0.618479 2_1:+35744224 None:intergenic
GGTAGGCTGAATTCTCCAGC+CGG 0.622126 2_1:-35742998 Msa0206450:CDS
TGATGTGGCTATGCCTGACA+TGG 0.623238 2_1:-35744465 Msa0206450:CDS
AACTCCCCATCATACTAGCA+TGG 0.628311 2_1:-35743158 Msa0206450:CDS
AACCAATCTAACCTAAACAA+TGG 0.629254 2_1:-35742851 Msa0206450:CDS
GCTGATCGGAATAAAAGGCT+CGG 0.629794 2_1:-35744049 Msa0206450:CDS
AAGGCTCGGTAAAAGAAGGA+AGG 0.633186 2_1:-35744035 Msa0206450:CDS
ATTGAGATGACATTGATGGA+TGG 0.636234 2_1:-35740388 Msa0206450:CDS
CCTACAAGTTGGAGAAGATG+AGG 0.646079 2_1:-35742067 Msa0206450:CDS
TGAAGCAGTTGCAAATCCAG+TGG 0.651314 2_1:+35742793 None:intergenic
TAATTCCAAGGATGATAACA+AGG 0.654052 2_1:-35744137 Msa0206450:CDS
CCAGCCGGCTTGAACATGAG+AGG 0.656492 2_1:-35742983 Msa0206450:CDS
TCAAAGGAGAGATGAAGATG+GGG 0.663775 2_1:-35745266 Msa0206450:CDS
GCACCTCAACCAGATCTGGA+AGG 0.664461 2_1:-35743066 Msa0206450:CDS
TGATAACAAGGCTTCCAATG+AGG 0.667904 2_1:-35744125 Msa0206450:CDS
AGCATGGTTGCTGGACTGGG+CGG 0.674097 2_1:-35743142 Msa0206450:CDS
TCAGGAGACCAAACCACACG+AGG 0.674901 2_1:+35743917 None:intergenic
ACGAGAATTTCTCAACTTCG+GGG 0.680347 2_1:+35742117 None:intergenic
TGACCTGGTTATCAGTGATG+TGG 0.683171 2_1:-35744480 Msa0206450:CDS
AAACAGAAAGAACTATGACC+TGG 0.684794 2_1:-35744495 Msa0206450:CDS
GCAACCATGCTAGTATGATG+GGG 0.686090 2_1:+35743154 None:intergenic
ATCAAATGCATGATCCAACA+GGG 0.688787 2_1:+35740344 None:intergenic
CCCTTAGAGAGAATGAACAC+AGG 0.699524 2_1:+35740030 None:intergenic
TTGCCGTCATATCCATCGAG+CGG 0.699753 2_1:-35743028 Msa0206450:CDS
ATCACAGAAGAAACCTCGTG+TGG 0.712689 2_1:-35743930 Msa0206450:CDS
CGATGGATATGACGGCAATG+TGG 0.745057 2_1:+35743033 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTATATATTTTTTTTTT+AGG - chr2_1:35740978-35740997 Msa0206450:intron 0.0%
!!! ATATTTTTTTTTTAGGTTTT+TGG - chr2_1:35740985-35741004 Msa0206450:intron 10.0%
!! TAAAAAATAATTTCATGATT+TGG + chr2_1:35742012-35742031 None:intergenic 10.0%
!!! TTTTATTTATTTTGGTATAA+CGG - chr2_1:35743840-35743859 Msa0206450:intron 10.0%
!! TTAAAATAAAAAGACAATAA+AGG + chr2_1:35744108-35744127 None:intergenic 10.0%
!! AAACAAATAATTAAAGTCAA+AGG - chr2_1:35740145-35740164 Msa0206450:three_prime_UTR 15.0%
!! AACAAATAATTAAAGTCAAA+GGG - chr2_1:35740146-35740165 Msa0206450:three_prime_UTR 15.0%
!!! TTTGTTTTGTTTTGTTTTAT+TGG - chr2_1:35740267-35740286 Msa0206450:three_prime_UTR 15.0%
!! TGAACTAAAACATAAAATTA+AGG + chr2_1:35740506-35740525 None:intergenic 15.0%
!! TTTGAGAAAATCATATAATT+CGG + chr2_1:35740673-35740692 None:intergenic 15.0%
!!! TGATTTTCTCAAATTATTAA+CGG - chr2_1:35740680-35740699 Msa0206450:intron 15.0%
!! ATAAATGTTAATTCATCATT+TGG + chr2_1:35742100-35742119 None:intergenic 15.0%
!!! CTAATTTTTTGGATTATAAT+CGG - chr2_1:35742999-35743018 Msa0206450:CDS 15.0%
!!! AAATAAATAAAATGATAACG+CGG + chr2_1:35743832-35743851 None:intergenic 15.0%
!!! CGTTATCATTTTATTTATTT+TGG - chr2_1:35743832-35743851 Msa0206450:intron 15.0%
!! AAATAATGCAAAAGAATTTA+TGG - chr2_1:35743982-35744001 Msa0206450:CDS 15.0%
!!! GTTCTATTAATTTTGTTTAA+AGG - chr2_1:35744227-35744246 Msa0206450:CDS 15.0%
!! TAAAATTACAAAAAGCTATA+TGG + chr2_1:35745062-35745081 None:intergenic 15.0%
!!! TATAGCTTTTTGTAATTTTA+AGG - chr2_1:35745062-35745081 Msa0206450:intron 15.0%
!!! ATAGCTTTTTGTAATTTTAA+GGG - chr2_1:35745063-35745082 Msa0206450:intron 15.0%
!!! ACATTTTCTTATTTCATTAA+TGG - chr2_1:35745432-35745451 Msa0206450:five_prime_UTR 15.0%
!!! CATTTTCTTATTTCATTAAT+GGG - chr2_1:35745433-35745452 Msa0206450:five_prime_UTR 15.0%
!! TGATATAAAAAAGTTAGACA+TGG - chr2_1:35740034-35740053 Msa0206450:three_prime_UTR 20.0%
!!! ATTATTTTCCTATTCGAAAT+TGG - chr2_1:35740059-35740078 Msa0206450:three_prime_UTR 20.0%
!! TATTATTTCCAATTTCGAAT+AGG + chr2_1:35740070-35740089 None:intergenic 20.0%
!!! TTGTTTCTTTATTTTGAAGA+TGG - chr2_1:35740304-35740323 Msa0206450:three_prime_UTR 20.0%
!!! TGTTTCTTTATTTTGAAGAT+GGG - chr2_1:35740305-35740324 Msa0206450:three_prime_UTR 20.0%
!!! TACTAAGTTCTAAAGTAATA+AGG + chr2_1:35740555-35740574 None:intergenic 20.0%
!! TCTTAAATTATTATACGTGT+CGG + chr2_1:35740832-35740851 None:intergenic 20.0%
!!! TTAAGTGTAATAATTTGTGT+CGG - chr2_1:35740863-35740882 Msa0206450:intron 20.0%
!!! TTACATTGCTATTAGAATTT+AGG - chr2_1:35741012-35741031 Msa0206450:intron 20.0%
!! CATTCTTCTATTTACAATAA+CGG - chr2_1:35741251-35741270 Msa0206450:intron 20.0%
!! ATTCTTCTATTTACAATAAC+GGG - chr2_1:35741252-35741271 Msa0206450:intron 20.0%
!!! TGGAATTAGTTTTTTTCTTT+CGG + chr2_1:35741454-35741473 None:intergenic 20.0%
!! AAAGAAAAAAACTAATTCCA+AGG - chr2_1:35741454-35741473 Msa0206450:intron 20.0%
!!! CATGAGAATAAATCTTTTAT+TGG + chr2_1:35741849-35741868 None:intergenic 20.0%
!!! ATAATTTCATGATTTGGAAA+AGG + chr2_1:35742006-35742025 None:intergenic 20.0%
!! ATTTCTTCATAAAAATGAAG+AGG + chr2_1:35742241-35742260 None:intergenic 20.0%
!!! AGTCTACTACATTATTTTTT+TGG - chr2_1:35743713-35743732 Msa0206450:CDS 20.0%
!!! TGAATTTTGAATACTTCTTT+TGG - chr2_1:35743868-35743887 Msa0206450:intron 20.0%
!!! TGTATCTAGTATTATTTCTT+TGG - chr2_1:35743898-35743917 Msa0206450:CDS 20.0%
!!! TCTTTTGCATTATTTCTAAA+AGG + chr2_1:35743977-35743996 None:intergenic 20.0%
!!! TTTTAACTTAATTGTATGCA+AGG - chr2_1:35744122-35744141 Msa0206450:CDS 20.0%
!! AATGATGAATGTAATTTAGA+CGG - chr2_1:35744250-35744269 Msa0206450:CDS 20.0%
!! TCTTAACATGAAAGATAAAA+GGG + chr2_1:35744825-35744844 None:intergenic 20.0%
!! ATCTTAACATGAAAGATAAA+AGG + chr2_1:35744826-35744845 None:intergenic 20.0%
!!! TCACTTTTATGTTGTTATTA+TGG - chr2_1:35745384-35745403 Msa0206450:intron 20.0%
!! TTATTATTGTATCTAGAGAA+AGG + chr2_1:35745525-35745544 None:intergenic 20.0%
! AATAATAATGCAGCTTTCTT+AGG + chr2_1:35740105-35740124 None:intergenic 25.0%
!!! TAGAATTTAGGTTTGATTTG+TGG - chr2_1:35741024-35741043 Msa0206450:intron 25.0%
! ACAAATTTCTTATGCAAATC+AGG + chr2_1:35741707-35741726 None:intergenic 25.0%
! ATATAGACTCTATCTGAAAA+AGG - chr2_1:35742421-35742440 Msa0206450:CDS 25.0%
! TTAAATCAAATAGATTCCAC+TGG - chr2_1:35742794-35742813 Msa0206450:CDS 25.0%
!! TCTTTTGTTGATCATGTATA+TGG - chr2_1:35743439-35743458 Msa0206450:intron 25.0%
!! ATTTAGTTTAGTTTAGTCGA+CGG - chr2_1:35743789-35743808 Msa0206450:intron 25.0%
! TATTGAAATTATGCAGACTA+TGG + chr2_1:35743943-35743962 None:intergenic 25.0%
! AATGCAAATTTGTCTACATT+TGG + chr2_1:35744036-35744055 None:intergenic 25.0%
! TTCTTCAATAACTATGAAAC+AGG - chr2_1:35744167-35744186 Msa0206450:CDS 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr2_1:35744395-35744414 Msa0206450:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG + chr2_1:35744571-35744590 None:intergenic 25.0%
!! TTATTTGAAACTATCTTGCA+GGG + chr2_1:35744693-35744712 None:intergenic 25.0%
!! ATTATTTGAAACTATCTTGC+AGG + chr2_1:35744694-35744713 None:intergenic 25.0%
! TGCAAGATAGTTTCAAATAA+TGG - chr2_1:35744693-35744712 Msa0206450:intron 25.0%
!!! GATAGTTTCAAATAATGGAT+TGG - chr2_1:35744698-35744717 Msa0206450:intron 25.0%
!!! TTTCAAATAATGGATTGGAT+TGG - chr2_1:35744703-35744722 Msa0206450:intron 25.0%
! ACATCAACCTTATATATTAG+TGG + chr2_1:35744739-35744758 None:intergenic 25.0%
! AGATAAAAGGGTAGATATAA+TGG + chr2_1:35744813-35744832 None:intergenic 25.0%
! ATATATTTGAATTCTCACCT+TGG - chr2_1:35745086-35745105 Msa0206450:intron 25.0%
!! TTCTTATTTCATTAATGGGA+TGG - chr2_1:35745437-35745456 Msa0206450:five_prime_UTR 25.0%
!! TCTTATTTCATTAATGGGAT+GGG - chr2_1:35745438-35745457 Msa0206450:five_prime_UTR 25.0%
! TTTTGGTCTAGAAAAAGTGA+AGG - chr2_1:35740184-35740203 Msa0206450:three_prime_UTR 30.0%
!! AAGTTCTAAAGTAATAAGGC+TGG + chr2_1:35740551-35740570 None:intergenic 30.0%
TCTCAAATTATTAACGGTGT+CGG - chr2_1:35740686-35740705 Msa0206450:intron 30.0%
AAATTTATGAAGCACGGATA+CGG + chr2_1:35740723-35740742 None:intergenic 30.0%
GTAGCAAAATTTATGAAGCA+CGG + chr2_1:35740729-35740748 None:intergenic 30.0%
TTGATGCACTAAAAATGTTG+AGG - chr2_1:35741083-35741102 Msa0206450:intron 30.0%
TGATGCACTAAAAATGTTGA+GGG - chr2_1:35741084-35741103 Msa0206450:intron 30.0%
!! TGGATTTAAGTTGCTTGAAT+TGG - chr2_1:35741162-35741181 Msa0206450:intron 30.0%
!! TTTAAGTTGCTTGAATTGGT+AGG - chr2_1:35741166-35741185 Msa0206450:intron 30.0%
!! AATAACGGGTTGAATTGAAT+CGG - chr2_1:35741266-35741285 Msa0206450:intron 30.0%
! ATTGAATCGGTTTATTGACT+CGG - chr2_1:35741279-35741298 Msa0206450:intron 30.0%
TTATCTTGTTCTAGTGTTGT+CGG - chr2_1:35741319-35741338 Msa0206450:intron 30.0%
TGATACAAGTATGGTATTCA+AGG - chr2_1:35741349-35741368 Msa0206450:intron 30.0%
GATACAAGTATGGTATTCAA+GGG - chr2_1:35741350-35741369 Msa0206450:intron 30.0%
TTGAAGAGCTTAGAAACATA+TGG - chr2_1:35741417-35741436 Msa0206450:intron 30.0%
TAATTCCAAGGATGATAACA+AGG - chr2_1:35741466-35741485 Msa0206450:intron 30.0%
AACAACTTCATATGTAGACA+TGG - chr2_1:35741811-35741830 Msa0206450:intron 30.0%
! ATCAGCTCAAGTATTTTCTT+CGG + chr2_1:35741893-35741912 None:intergenic 30.0%
TTGAGCTGATGAATATTGAA+GGG - chr2_1:35741903-35741922 Msa0206450:intron 30.0%
AATAAACTTGTCTAGTCAGT+AGG + chr2_1:35742186-35742205 None:intergenic 30.0%
AACCAATCTAACCTAAACAA+TGG - chr2_1:35742752-35742771 Msa0206450:CDS 30.0%
TTCAGACTTTCAAGATAGTA+GGG - chr2_1:35742829-35742848 Msa0206450:CDS 30.0%
GGAAACAGAAACATTACTAT+TGG - chr2_1:35742968-35742987 Msa0206450:CDS 30.0%
AACAGAAACATTACTATTGG+CGG - chr2_1:35742971-35742990 Msa0206450:CDS 30.0%
TTATTGAAAGACTTGCATAC+CGG + chr2_1:35743082-35743101 None:intergenic 30.0%
AAAGCAGTAATGTTATTGAG+AGG + chr2_1:35743115-35743134 None:intergenic 30.0%
GTCTGCATAATTTCAATATC+AGG - chr2_1:35743945-35743964 Msa0206450:CDS 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr2_1:35744391-35744410 None:intergenic 30.0%
TTGATCTACTCTTCTTACAA+CGG + chr2_1:35744455-35744474 None:intergenic 30.0%
TGTAAGAAGAGTAGATCAAA+TGG - chr2_1:35744456-35744475 Msa0206450:CDS 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + chr2_1:35744514-35744533 None:intergenic 30.0%
! TTTTCGAATGGTTTCTCTAA+TGG + chr2_1:35744524-35744543 None:intergenic 30.0%
AACCATTCGAAAAGATTTAG+AGG - chr2_1:35744531-35744550 Msa0206450:CDS 30.0%
! TGGTTTTTGATAGAACACTA+TGG - chr2_1:35744575-35744594 Msa0206450:intron 30.0%
ATGTTAAGATCATATCTCTC+AGG - chr2_1:35744836-35744855 Msa0206450:intron 30.0%
! TGATTTTGTGCTAAATGATG+TGG - chr2_1:35744979-35744998 Msa0206450:intron 30.0%
! TTTCAAGATTTTATTGCTCC+TGG + chr2_1:35745306-35745325 None:intergenic 30.0%
ATGAAATAAACTCCAGAGAT+AGG + chr2_1:35745335-35745354 None:intergenic 30.0%
AATAATGCAGCTTTCTTAGG+AGG + chr2_1:35740102-35740121 None:intergenic 35.0%
! GGTTTTTGTCACTGTTCTTT+TGG - chr2_1:35740167-35740186 Msa0206450:three_prime_UTR 35.0%
!!! CTTTATTTTGAAGATGGGTG+TGG - chr2_1:35740310-35740329 Msa0206450:three_prime_UTR 35.0%
AATCAAAGGAGAGATGAAGA+TGG - chr2_1:35740335-35740354 Msa0206450:exon 35.0%
ATCAAAGGAGAGATGAAGAT+GGG - chr2_1:35740336-35740355 Msa0206450:exon 35.0%
CTTGCTGAATGCAAATATCA+TGG - chr2_1:35740440-35740459 Msa0206450:intron 35.0%
ACAGACACACTATTTCGATT+AGG - chr2_1:35740591-35740610 Msa0206450:intron 35.0%
GTAACTATATGTGTCAGTGT+CGG + chr2_1:35740649-35740668 None:intergenic 35.0%
! GTAATAATTTGTGTCGGTGT+CGG - chr2_1:35740869-35740888 Msa0206450:intron 35.0%
AAACAGAAAGAACTATGACC+TGG - chr2_1:35741108-35741127 Msa0206450:intron 35.0%
AACTTAAATCCATCCATGTC+AGG + chr2_1:35741154-35741173 None:intergenic 35.0%
TGAATTGGTAGGACTTGAAA+TGG - chr2_1:35741177-35741196 Msa0206450:intron 35.0%
TGTATGAACTTACTGATGAC+AGG + chr2_1:35741208-35741227 None:intergenic 35.0%
TATCTTGTTCTAGTGTTGTC+GGG - chr2_1:35741320-35741339 Msa0206450:intron 35.0%
GATAAGGTCCCTAATATTTC+TGG - chr2_1:35741500-35741519 Msa0206450:intron 35.0%
TGCTTCCACCAGAAATATTA+GGG + chr2_1:35741511-35741530 None:intergenic 35.0%
TTGCTTCCACCAGAAATATT+AGG + chr2_1:35741512-35741531 None:intergenic 35.0%
TGGAAGCAATCAGAACATAT+TGG - chr2_1:35741523-35741542 Msa0206450:intron 35.0%
! ATAAAAGGCTCGGTAAAAGA+AGG - chr2_1:35741564-35741583 Msa0206450:intron 35.0%
AAGATGATGAAGAGAGTGAA+GGG - chr2_1:35741621-35741640 Msa0206450:intron 35.0%
! GTTTGTGCTGTTAATCAACT+TGG - chr2_1:35741725-35741744 Msa0206450:intron 35.0%
!! ATTCTCATGTTTGTTGTTGC+AGG - chr2_1:35741860-35741879 Msa0206450:intron 35.0%
!! TTCTCATGTTTGTTGTTGCA+GGG - chr2_1:35741861-35741880 Msa0206450:intron 35.0%
CTTGAGCTGATGAATATTGA+AGG - chr2_1:35741902-35741921 Msa0206450:intron 35.0%
CAAGAATAAAGACCTGCAAA+TGG + chr2_1:35741952-35741971 None:intergenic 35.0%
AACGATTATGGTGACTACAA+AGG + chr2_1:35741975-35741994 None:intergenic 35.0%
AAGGCTAAACAGAACGATTA+TGG + chr2_1:35741987-35742006 None:intergenic 35.0%
! GTGGTAATGATTCTTACCTT+CGG - chr2_1:35742483-35742502 Msa0206450:CDS 35.0%
ATAGATGGATATGCAGACTT+TGG - chr2_1:35742515-35742534 Msa0206450:CDS 35.0%
!!! TTGATGTTTTGAGACTGAAC+AGG + chr2_1:35742671-35742690 None:intergenic 35.0%
CAAAGCTCAAGCTTATTACA+TGG - chr2_1:35742713-35742732 Msa0206450:CDS 35.0%
! TAGGTTAGATTGGTTAAGCT+CGG + chr2_1:35742747-35742766 None:intergenic 35.0%
! CACCATTGTTTAGGTTAGAT+TGG + chr2_1:35742757-35742776 None:intergenic 35.0%
CTTCAGACTTTCAAGATAGT+AGG - chr2_1:35742828-35742847 Msa0206450:CDS 35.0%
! GTTTGAGACTTGATTAGAAC+TGG + chr2_1:35742861-35742880 None:intergenic 35.0%
! AGTAATGTTTCTGTTTCCCA+AGG + chr2_1:35742966-35742985 None:intergenic 35.0%
!!! TGGCGGTTCTTCTAATTTTT+TGG - chr2_1:35742988-35743007 Msa0206450:CDS 35.0%
ATAATCGGTGTAGTGAAAAC+TGG - chr2_1:35743014-35743033 Msa0206450:CDS 35.0%
TAATGTTATTGAGAGGCAGT+TGG + chr2_1:35743108-35743127 None:intergenic 35.0%
AAACTGGGCAGAAAATAAAC+CGG - chr2_1:35743285-35743304 Msa0206450:intron 35.0%
TGTGAGTTCAAAGGATTGAA+GGG + chr2_1:35743334-35743353 None:intergenic 35.0%
TGACGAGAATTTCTCAACTT+CGG + chr2_1:35743491-35743510 None:intergenic 35.0%
TGGAACCTTAGAAGACATAA+TGG - chr2_1:35743585-35743604 Msa0206450:intron 35.0%
GGAACCTTAGAAGACATAAT+GGG - chr2_1:35743586-35743605 Msa0206450:intron 35.0%
! TAATGGGTGCAATAGTCAAA+AGG - chr2_1:35743602-35743621 Msa0206450:intron 35.0%
AATGGGTGCAATAGTCAAAA+GGG - chr2_1:35743603-35743622 Msa0206450:intron 35.0%
GTAGACTAGAGCAAGAAAAA+AGG + chr2_1:35743700-35743719 None:intergenic 35.0%
TGGATTGAAAGTTTAGTCTG+CGG - chr2_1:35743733-35743752 Msa0206450:intron 35.0%
! ATAAAGGTGTATGTAACCAG+AGG + chr2_1:35744092-35744111 None:intergenic 35.0%
AGACTAGATAGGATAGGATT+AGG - chr2_1:35744333-35744352 Msa0206450:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr2_1:35744384-35744403 Msa0206450:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr2_1:35744404-35744423 Msa0206450:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr2_1:35744409-35744428 Msa0206450:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr2_1:35744459-35744478 Msa0206450:CDS 35.0%
! GACCTCTAAATCTTTTCGAA+TGG + chr2_1:35744536-35744555 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr2_1:35744543-35744562 Msa0206450:CDS 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr2_1:35744555-35744574 Msa0206450:intron 35.0%
! TGGTTGTTGTTGTTGTTGTA+AGG - chr2_1:35744643-35744662 Msa0206450:intron 35.0%
! GGTTGTTGTTGTTGTTGTAA+GGG - chr2_1:35744644-35744663 Msa0206450:intron 35.0%
! GTTGTTGTTGTTGTTGTAAG+GGG - chr2_1:35744645-35744664 Msa0206450:intron 35.0%
GCAAGCACCACTAATATATA+AGG - chr2_1:35744729-35744748 Msa0206450:intron 35.0%
!! AGGTTGATGTACTAATTTGC+TGG - chr2_1:35744749-35744768 Msa0206450:intron 35.0%
AGGACATACATTCAAATCCA+AGG + chr2_1:35745106-35745125 None:intergenic 35.0%
CTTACAATGTCTTAGAGAGA+TGG + chr2_1:35745135-35745154 None:intergenic 35.0%
CATGATAGACTTTGTAATGC+AGG - chr2_1:35745187-35745206 Msa0206450:CDS 35.0%
GCAAATTGAGATGACATTGA+TGG - chr2_1:35745211-35745230 Msa0206450:CDS 35.0%
ATTGAGATGACATTGATGGA+TGG - chr2_1:35745215-35745234 Msa0206450:CDS 35.0%
ATCAAATGCATGATCCAACA+GGG + chr2_1:35745262-35745281 None:intergenic 35.0%
AATCAAATGCATGATCCAAC+AGG + chr2_1:35745263-35745282 None:intergenic 35.0%
TTGAAACTTACTCCTATCTC+TGG - chr2_1:35745320-35745339 Msa0206450:intron 35.0%
CAAGAAGAAGGAAAAAGAGA+CGG + chr2_1:35745477-35745496 None:intergenic 35.0%
AGAGCAGAACATAGAGTAAG+AGG - chr2_1:35740219-35740238 Msa0206450:three_prime_UTR 40.0%
TCAAAGGAGAGATGAAGATG+GGG - chr2_1:35740337-35740356 Msa0206450:exon 40.0%
!! CCAAGACTTTGAGACAAGTT+GGG + chr2_1:35740412-35740431 None:intergenic 40.0%
! TAACTTTTGCCCTATGAAGC+TGG - chr2_1:35740764-35740783 Msa0206450:intron 40.0%
! AACTTTTGCCCTATGAAGCT+GGG - chr2_1:35740765-35740784 Msa0206450:intron 40.0%
GCAGTTACTACAGCTACTAA+TGG - chr2_1:35741058-35741077 Msa0206450:intron 40.0%
GGGATACAGTGATACAAGTA+TGG - chr2_1:35741340-35741359 Msa0206450:intron 40.0%
TGATAACAAGGCTTCCAATG+AGG - chr2_1:35741478-35741497 Msa0206450:intron 40.0%
ATTAGGGACCTTATCCTCAT+TGG + chr2_1:35741495-35741514 None:intergenic 40.0%
!! AAGGTCCCTAATATTTCTGG+TGG - chr2_1:35741503-35741522 Msa0206450:intron 40.0%
!! TATTGGAGAACAGTGCTGAT+CGG - chr2_1:35741540-35741559 Msa0206450:intron 40.0%
!! ACAGTGCTGATCGGAATAAA+AGG - chr2_1:35741549-35741568 Msa0206450:intron 40.0%
GAAGATGATGAAGAGAGTGA+AGG - chr2_1:35741620-35741639 Msa0206450:intron 40.0%
!! TCTCATGTTTGTTGTTGCAG+GGG - chr2_1:35741862-35741881 Msa0206450:intron 40.0%
!!! ATGGCTTGCTACATTTTCTC+TGG + chr2_1:35741933-35741952 None:intergenic 40.0%
AAATGTAGCAAGCCATTTGC+AGG - chr2_1:35741937-35741956 Msa0206450:intron 40.0%
AGCAACCATGCTAGTATGAT+GGG + chr2_1:35742453-35742472 None:intergenic 40.0%
AATTCCTCTCATGTTCAAGC+CGG + chr2_1:35742627-35742646 None:intergenic 40.0%
CTCAAAACATCAACAACTCC+TGG - chr2_1:35742678-35742697 Msa0206450:CDS 40.0%
!! AAGCTTGAGCTTTGATTTGC+AGG + chr2_1:35742707-35742726 None:intergenic 40.0%
! TTAGATTGGTTAAGCTCGGT+TGG + chr2_1:35742743-35742762 None:intergenic 40.0%
AACCTAAACAATGGTGCAAC+TGG - chr2_1:35742761-35742780 Msa0206450:CDS 40.0%
TACCAGTTGCACCATTGTTT+AGG + chr2_1:35742766-35742785 None:intergenic 40.0%
AACCATCATCTGTTGTTGCA+AGG - chr2_1:35742878-35742897 Msa0206450:CDS 40.0%
TTCCTTGCAACAACAGATGA+TGG + chr2_1:35742883-35742902 None:intergenic 40.0%
GTCAGAAATCAGTCTTCTGT+TGG - chr2_1:35742932-35742951 Msa0206450:CDS 40.0%
! AAAGCACTAGCAGGAAATTC+AGG + chr2_1:35743058-35743077 None:intergenic 40.0%
TTTCCAGACGAAAAGTCAAC+TGG + chr2_1:35743166-35743185 None:intergenic 40.0%
! AAACACAATCACTGCTGCTT+TGG - chr2_1:35743183-35743202 Msa0206450:CDS 40.0%
AATTCCCAATCAAGCCATCT+TGG + chr2_1:35743234-35743253 None:intergenic 40.0%
CTGTGAGTTCAAAGGATTGA+AGG + chr2_1:35743335-35743354 None:intergenic 40.0%
CTTCAATCCTTTGAACTCAC+AGG - chr2_1:35743333-35743352 Msa0206450:intron 40.0%
GAACAAACCTGTGAGTTCAA+AGG + chr2_1:35743343-35743362 None:intergenic 40.0%
AGAATTTGTCAATGCCCTAC+TGG + chr2_1:35743365-35743384 None:intergenic 40.0%
! TGCTGCAGACTGTTTTACTT+TGG + chr2_1:35743405-35743424 None:intergenic 40.0%
ACGAGAATTTCTCAACTTCG+GGG + chr2_1:35743489-35743508 None:intergenic 40.0%
GACGAGAATTTCTCAACTTC+GGG + chr2_1:35743490-35743509 None:intergenic 40.0%
! TCCCAAGTTGGATATGTTGA+GGG - chr2_1:35743559-35743578 Msa0206450:intron 40.0%
ACCCTCAACATATCCAACTT+GGG + chr2_1:35743563-35743582 None:intergenic 40.0%
AACCCTCAACATATCCAACT+TGG + chr2_1:35743564-35743583 None:intergenic 40.0%
! GTTGGATATGTTGAGGGTTT+TGG - chr2_1:35743565-35743584 Msa0206450:intron 40.0%
TGCACCCATTATGTCTTCTA+AGG + chr2_1:35743593-35743612 None:intergenic 40.0%
! TCTGCTCTTATGTTTTCCTC+TGG - chr2_1:35744073-35744092 Msa0206450:CDS 40.0%
GATGAGTGGTAAGACTAGAT+AGG - chr2_1:35744322-35744341 Msa0206450:intron 40.0%
GTGGTAAGACTAGATAGGAT+AGG - chr2_1:35744327-35744346 Msa0206450:intron 40.0%
TCTTCTTACAACGGCATCTA+CGG + chr2_1:35744446-35744465 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr2_1:35744484-35744503 Msa0206450:CDS 40.0%
!! GATGTACTAATTTGCTGGCA+TGG - chr2_1:35744754-35744773 Msa0206450:intron 40.0%
TACTATAGGTGTTAGTGCAC+TGG - chr2_1:35745027-35745046 Msa0206450:intron 40.0%
TCTTAGAGAGATGGATGACA+AGG + chr2_1:35745126-35745145 None:intergenic 40.0%
TGTTATGATGCATACCCTGT+TGG - chr2_1:35745245-35745264 Msa0206450:CDS 40.0%
TTCTGATTCAGCAAGAATCC+AGG - chr2_1:35745285-35745304 Msa0206450:intron 40.0%
TTTGCTGCAAAGCAAGAAGA+AGG + chr2_1:35745489-35745508 None:intergenic 40.0%
TCCTGTGTTCATTCTCTCTA+AGG - chr2_1:35745572-35745591 Msa0206450:five_prime_UTR 40.0%
CCTGTGTTCATTCTCTCTAA+GGG - chr2_1:35745573-35745592 Msa0206450:five_prime_UTR 40.0%
CTGTGTTCATTCTCTCTAAG+GGG - chr2_1:35745574-35745593 Msa0206450:five_prime_UTR 40.0%
AATGCAGCTTTCTTAGGAGG+AGG + chr2_1:35740099-35740118 None:intergenic 45.0%
AGATGGGTGTGGAGAATCAA+AGG - chr2_1:35740321-35740340 Msa0206450:three_prime_UTR 45.0%
CACGCATACCAACAGGAAAA+CGG + chr2_1:35740370-35740389 None:intergenic 45.0%
CCCAACTTGTCTCAAAGTCT+TGG - chr2_1:35740409-35740428 Msa0206450:intron 45.0%
!! GCCAAGACTTTGAGACAAGT+TGG + chr2_1:35740413-35740432 None:intergenic 45.0%
! TATTATACGTGTCGGCGTGT+AGG + chr2_1:35740824-35740843 None:intergenic 45.0%
ATCGGGATACACATTATCCG+AGG - chr2_1:35740897-35740916 Msa0206450:intron 45.0%
!! TGTCCGTGCTTGATAGCTTT+TGG - chr2_1:35740922-35740941 Msa0206450:intron 45.0%
GAGCCAAAAGCTATCAAGCA+CGG + chr2_1:35740928-35740947 None:intergenic 45.0%
TGACCTGGTTATCAGTGATG+TGG - chr2_1:35741123-35741142 Msa0206450:intron 45.0%
TAGCCACATCACTGATAACC+AGG + chr2_1:35741129-35741148 None:intergenic 45.0%
!! GTATTCAAGGGTGTTACCCA+TGG - chr2_1:35741362-35741381 Msa0206450:intron 45.0%
CAGATAGTCACATGCACCAT+GGG + chr2_1:35741381-35741400 None:intergenic 45.0%
CTAAGCTCTTCAAGTCGAAC+AGG + chr2_1:35741410-35741429 None:intergenic 45.0%
!! GGAAGCCTTGTTATCATCCT+TGG + chr2_1:35741474-35741493 None:intergenic 45.0%
CAAGGCTTCCAATGAGGATA+AGG - chr2_1:35741484-35741503 Msa0206450:intron 45.0%
GCTGATCGGAATAAAAGGCT+CGG - chr2_1:35741554-35741573 Msa0206450:intron 45.0%
! AAGGCTCGGTAAAAGAAGGA+AGG - chr2_1:35741568-35741587 Msa0206450:intron 45.0%
AAGAAGGAAGGAGCAAGATG+AGG - chr2_1:35741580-35741599 Msa0206450:intron 45.0%
GAGGTTTCTTCTGTGATGAC+GGG + chr2_1:35741670-35741689 None:intergenic 45.0%
CGAGGTTTCTTCTGTGATGA+CGG + chr2_1:35741671-35741690 None:intergenic 45.0%
ATCACAGAAGAAACCTCGTG+TGG - chr2_1:35741673-35741692 Msa0206450:intron 45.0%
AGAAGAAACCTCGTGTGGTT+TGG - chr2_1:35741678-35741697 Msa0206450:intron 45.0%
!! CAAGTCTCAAAAGCGTCAAG+AGG + chr2_1:35742145-35742164 None:intergenic 45.0%
AACTCCCCATCATACTAGCA+TGG - chr2_1:35742445-35742464 Msa0206450:CDS 45.0%
GCAACCATGCTAGTATGATG+GGG + chr2_1:35742452-35742471 None:intergenic 45.0%
CAGCAACCATGCTAGTATGA+TGG + chr2_1:35742454-35742473 None:intergenic 45.0%
CATCATACTAGCATGGTTGC+TGG - chr2_1:35742452-35742471 Msa0206450:CDS 45.0%
GATTCTTACCTTCGGATGAG+TGG - chr2_1:35742491-35742510 Msa0206450:CDS 45.0%
CATCTATTCCACTCATCCGA+AGG + chr2_1:35742502-35742521 None:intergenic 45.0%
CTTCGGATGAGTGGAATAGA+TGG - chr2_1:35742500-35742519 Msa0206450:CDS 45.0%
! TATCCATCGAGCGGAGTTTT+CGG - chr2_1:35742584-35742603 Msa0206450:CDS 45.0%
!! GCTTTGATTTGCAGGAATCC+AGG + chr2_1:35742699-35742718 None:intergenic 45.0%
TGAAGCAGTTGCAAATCCAG+TGG + chr2_1:35742813-35742832 None:intergenic 45.0%
TCACAACAGACACACAATGC+AGG - chr2_1:35742905-35742924 Msa0206450:CDS 45.0%
CACAACAGACACACAATGCA+GGG - chr2_1:35742906-35742925 Msa0206450:CDS 45.0%
TTCTGTTGGATCTGCTTCCT+TGG - chr2_1:35742946-35742965 Msa0206450:CDS 45.0%
TCTGTTGGATCTGCTTCCTT+GGG - chr2_1:35742947-35742966 Msa0206450:CDS 45.0%
ATTTCCTGCTAGTGCTTTGC+CGG - chr2_1:35743060-35743079 Msa0206450:CDS 45.0%
TGTTAGCGATAAGAGGGCTT+TGG + chr2_1:35743141-35743160 None:intergenic 45.0%
CTGGACTGTTAGCGATAAGA+GGG + chr2_1:35743147-35743166 None:intergenic 45.0%
ACTGGACTGTTAGCGATAAG+AGG + chr2_1:35743148-35743167 None:intergenic 45.0%
!! AGTCCAGTTGACTTTTCGTC+TGG - chr2_1:35743160-35743179 Msa0206450:CDS 45.0%
ATCAAGCCATCTTGGCATCT+CGG + chr2_1:35743226-35743245 None:intergenic 45.0%
AGATGCCAAGATGGCTTGAT+TGG - chr2_1:35743226-35743245 Msa0206450:intron 45.0%
GATGCCAAGATGGCTTGATT+GGG - chr2_1:35743227-35743246 Msa0206450:intron 45.0%
TTATGCTCCGCGACAAAACT+GGG - chr2_1:35743270-35743289 Msa0206450:intron 45.0%
!! TTTTCTGCCCAGTTTTGTCG+CGG + chr2_1:35743280-35743299 None:intergenic 45.0%
!!! CTCGTGTTTTGGCTGTAATC+CGG + chr2_1:35743307-35743326 None:intergenic 45.0%
! ACTCACAGGTTTGTTCCAGT+AGG - chr2_1:35743347-35743366 Msa0206450:intron 45.0%
! CTCACAGGTTTGTTCCAGTA+GGG - chr2_1:35743348-35743367 Msa0206450:intron 45.0%
! TTTCTCAACTTCGGGGTACT+GGG + chr2_1:35743482-35743501 None:intergenic 45.0%
ATTTCTCAACTTCGGGGTAC+TGG + chr2_1:35743483-35743502 None:intergenic 45.0%
CACGAATGATGCCTACAAGT+TGG - chr2_1:35743525-35743544 Msa0206450:intron 45.0%
CCTCATCTTCTCCAACTTGT+AGG + chr2_1:35743539-35743558 None:intergenic 45.0%
! CCTACAAGTTGGAGAAGATG+AGG - chr2_1:35743536-35743555 Msa0206450:intron 45.0%
! GTCCCAAGTTGGATATGTTG+AGG - chr2_1:35743558-35743577 Msa0206450:intron 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr2_1:35744277-35744296 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr2_1:35744280-35744299 Msa0206450:intron 45.0%
TGACACCATTAGAGAGAGAG+TGG - chr2_1:35744358-35744377 Msa0206450:intron 45.0%
GACACCATTAGAGAGAGAGT+GGG - chr2_1:35744359-35744378 Msa0206450:intron 45.0%
ACACCATTAGAGAGAGAGTG+GGG - chr2_1:35744360-35744379 Msa0206450:intron 45.0%
CTTCTTACAACGGCATCTAC+GGG + chr2_1:35744445-35744464 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr2_1:35744468-35744487 Msa0206450:CDS 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr2_1:35744478-35744497 Msa0206450:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr2_1:35744624-35744643 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr2_1:35744625-35744644 None:intergenic 45.0%
CCCTTAGAGAGAATGAACAC+AGG + chr2_1:35745576-35745595 None:intergenic 45.0%
! GTCGTTGACCGTTTTCCTGT+TGG - chr2_1:35740359-35740378 Msa0206450:CDS 50.0%
GCAAGAACACGCATACCAAC+AGG + chr2_1:35740377-35740396 None:intergenic 50.0%
TTCGATTAGGCATGTCCCAG+TGG - chr2_1:35740604-35740623 Msa0206450:intron 50.0%
GTCTGTGTCCCAGCTTCATA+GGG + chr2_1:35740776-35740795 None:intergenic 50.0%
TGTCTGTGTCCCAGCTTCAT+AGG + chr2_1:35740777-35740796 None:intergenic 50.0%
TATCAAGCACGGACACTCCT+CGG + chr2_1:35740917-35740936 None:intergenic 50.0%
TGATGTGGCTATGCCTGACA+TGG - chr2_1:35741138-35741157 Msa0206450:intron 50.0%
CCAGATAGTCACATGCACCA+TGG + chr2_1:35741382-35741401 None:intergenic 50.0%
CCATGGTGCATGTGACTATC+TGG - chr2_1:35741379-35741398 Msa0206450:intron 50.0%
AAGGAAGGAGCAAGATGAGG+AGG - chr2_1:35741583-35741602 Msa0206450:intron 50.0%
TACTAGCATGGTTGCTGGAC+TGG - chr2_1:35742457-35742476 Msa0206450:CDS 50.0%
ACTAGCATGGTTGCTGGACT+GGG - chr2_1:35742458-35742477 Msa0206450:CDS 50.0%
TTTGGCACCTCAACCAGATC+TGG - chr2_1:35742533-35742552 Msa0206450:CDS 50.0%
GATCCTTCCAGATCTGGTTG+AGG + chr2_1:35742543-35742562 None:intergenic 50.0%
CGATGGATATGACGGCAATG+TGG + chr2_1:35742573-35742592 None:intergenic 50.0%
TTGCCGTCATATCCATCGAG+CGG - chr2_1:35742575-35742594 Msa0206450:CDS 50.0%
ACTCCGCTCGATGGATATGA+CGG + chr2_1:35742581-35742600 None:intergenic 50.0%
!! CACAATCACTGCTGCTTTGG+AGG - chr2_1:35743186-35743205 Msa0206450:CDS 50.0%
TTGGCATCTCGGCACATTTC+TGG + chr2_1:35743215-35743234 None:intergenic 50.0%
AATGTGCCGAGATGCCAAGA+TGG - chr2_1:35743217-35743236 Msa0206450:intron 50.0%
TGTCGCGGAGCATAACTTGA+AGG + chr2_1:35743265-35743284 None:intergenic 50.0%
GTTATGCTCCGCGACAAAAC+TGG - chr2_1:35743269-35743288 Msa0206450:intron 50.0%
! TGAAGGGACGACTCGTGTTT+TGG + chr2_1:35743318-35743337 None:intergenic 50.0%
GAGAAGATGAGGTCCCAAGT+TGG - chr2_1:35743547-35743566 Msa0206450:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - chr2_1:35744288-35744307 Msa0206450:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG - chr2_1:35744308-35744327 Msa0206450:intron 50.0%
CTACCCCACTCTCTCTCTAA+TGG + chr2_1:35744366-35744385 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr2_1:35744620-35744639 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr2_1:35744626-35744645 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr2_1:35744623-35744642 Msa0206450:intron 50.0%
! TAGGTGTTAGTGCACTGGTG+AGG - chr2_1:35745032-35745051 Msa0206450:intron 50.0%
! AGGTGTTAGTGCACTGGTGA+GGG - chr2_1:35745033-35745052 Msa0206450:intron 50.0%
GACACGTGTCTGACACCACT+GGG + chr2_1:35740622-35740641 None:intergenic 55.0%
TGGGACACAGACACGAACAG+CGG - chr2_1:35740784-35740803 Msa0206450:intron 55.0%
GTGGCTATGCCTGACATGGA+TGG - chr2_1:35741142-35741161 Msa0206450:intron 55.0%
! GAGAGTGAAGGGAGTGCAGA+TGG - chr2_1:35741632-35741651 Msa0206450:intron 55.0%
! AGGGAGTGCAGATGGAGATG+AGG - chr2_1:35741640-35741659 Msa0206450:intron 55.0%
TCAGGAGACCAAACCACACG+AGG + chr2_1:35741689-35741708 None:intergenic 55.0%
GCACCTCAACCAGATCTGGA+AGG - chr2_1:35742537-35742556 Msa0206450:CDS 55.0%
GCTTGCGATCCTTCCAGATC+TGG + chr2_1:35742549-35742568 None:intergenic 55.0%
CTACCGAAAACTCCGCTCGA+TGG + chr2_1:35742590-35742609 None:intergenic 55.0%
! CATCGAGCGGAGTTTTCGGT+AGG - chr2_1:35742588-35742607 Msa0206450:CDS 55.0%
GGTAGGCTGAATTCTCCAGC+CGG - chr2_1:35742605-35742624 Msa0206450:CDS 55.0%
! CATACCGGCAAAGCACTAGC+AGG + chr2_1:35743067-35743086 None:intergenic 55.0%
CGGAGATGAGGATGTTGCGT+TGG - chr2_1:35744300-35744319 Msa0206450:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr2_1:35744612-35744631 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr2_1:35744611-35744630 Msa0206450:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr2_1:35744612-35744631 Msa0206450:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr2_1:35744618-35744637 Msa0206450:intron 55.0%
CGACACGTGTCTGACACCAC+TGG + chr2_1:35740623-35740642 None:intergenic 60.0%
GGCGTGTAGGTGTCTGTGTC+GGG + chr2_1:35740811-35740830 None:intergenic 60.0%
CGGCGTGTAGGTGTCTGTGT+CGG + chr2_1:35740812-35740831 None:intergenic 60.0%
!! GTGTCGGTGTCGGACGACAT+CGG - chr2_1:35740879-35740898 Msa0206450:intron 60.0%
!! TGTCGGTGTCGGACGACATC+GGG - chr2_1:35740880-35740899 Msa0206450:intron 60.0%
! AGCATGGTTGCTGGACTGGG+CGG - chr2_1:35742461-35742480 Msa0206450:CDS 60.0%
CCTCTCATGTTCAAGCCGGC+TGG + chr2_1:35742623-35742642 None:intergenic 60.0%
!! CCAGCCGGCTTGAACATGAG+AGG - chr2_1:35742620-35742639 Msa0206450:CDS 60.0%
! ATGGTTGCTGGACTGGGCGG+TGG - chr2_1:35742464-35742483 Msa0206450:CDS 65.0%
!! GGGGTACTGGGCAACTGACG+TGG + chr2_1:35743470-35743489 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 35740026 35745599 35740026 ID=Msa0206450;Name=Msa0206450
chr2_1 mRNA 35740026 35745599 35740026 ID=Msa0206450-mRNA-1;Parent=Msa0206450;Name=Msa0206450-mRNA-1;_AED=0.08;_eAED=0.08;_QI=208|1|1|1|0.83|0.85|7|319|689
chr2_1 exon 35740026 35740416 35740026 ID=Msa0206450-mRNA-1:exon:11768;Parent=Msa0206450-mRNA-1
chr2_1 exon 35742001 35743206 35742001 ID=Msa0206450-mRNA-1:exon:11767;Parent=Msa0206450-mRNA-1
chr2_1 exon 35743667 35743743 35743667 ID=Msa0206450-mRNA-1:exon:11766;Parent=Msa0206450-mRNA-1
chr2_1 exon 35743870 35744292 35743870 ID=Msa0206450-mRNA-1:exon:11765;Parent=Msa0206450-mRNA-1
chr2_1 exon 35744411 35744563 35744411 ID=Msa0206450-mRNA-1:exon:11764;Parent=Msa0206450-mRNA-1
chr2_1 exon 35745164 35745302 35745164 ID=Msa0206450-mRNA-1:exon:11763;Parent=Msa0206450-mRNA-1
chr2_1 exon 35745392 35745599 35745392 ID=Msa0206450-mRNA-1:exon:11762;Parent=Msa0206450-mRNA-1
chr2_1 five_prime_UTR 35745392 35745599 35745392 ID=Msa0206450-mRNA-1:five_prime_utr;Parent=Msa0206450-mRNA-1
chr2_1 CDS 35745164 35745302 35745164 ID=Msa0206450-mRNA-1:cds;Parent=Msa0206450-mRNA-1
chr2_1 CDS 35744411 35744563 35744411 ID=Msa0206450-mRNA-1:cds;Parent=Msa0206450-mRNA-1
chr2_1 CDS 35743870 35744292 35743870 ID=Msa0206450-mRNA-1:cds;Parent=Msa0206450-mRNA-1
chr2_1 CDS 35743667 35743743 35743667 ID=Msa0206450-mRNA-1:cds;Parent=Msa0206450-mRNA-1
chr2_1 CDS 35742001 35743206 35742001 ID=Msa0206450-mRNA-1:cds;Parent=Msa0206450-mRNA-1
chr2_1 CDS 35740345 35740416 35740345 ID=Msa0206450-mRNA-1:cds;Parent=Msa0206450-mRNA-1
chr2_1 three_prime_UTR 35740026 35740344 35740026 ID=Msa0206450-mRNA-1:three_prime_utr;Parent=Msa0206450-mRNA-1
Gene Sequence

>Msa0206450

ATGGGTGTGGAGAATCAAAGGAGAGATGAAGATGGGGTCGTTGACCGTTTTCCTGTTGGTATGCGTGTTCTTGCTGTTGATGACAACCCAACTTGTCTCAAAGTCTTGGCTAAACTGCTTGCTGAATGCAAATATCATGTTACTACAGCTACTAATGGATTTGATGCACTAAAAATGTTGAGGGAAAACAGAAAGAACTATGACCTGGTTATCAGTGATGTGGCTATGCCTGACATGGATGGATTTAAGTTGCTTGAATTGGTAGGACTTGAAATGGACTTACCTGTCATCATGTTGTCGGGATACAGTGATACAAGTATGGTATTCAAGGGTGTTACCCATGGTGCATGTGACTATCTGGTGAAACCTGTTCGACTTGAAGAGCTTAGAAACATATGGCAACATGTAATCCGAAAGAAAAAAACTAATTCCAAGGATGATAACAAGGCTTCCAATGAGGATAAGGTCCCTAATATTTCTGGTGGAAGCAATCAGAACATATTGGAGAACAGTGCTGATCGGAATAAAAGGCTCGGTAAAAGAAGGAAGGAGCAAGATGAGGAGGAGAAAGAAGAAGAAGAAGATGATGAAGAGAGTGAAGGGAGTGCAGATGGAGATGAGGATGACCCGTCATCACAGAAGAAACCTCGTGTGGTTTGGTCTCCTGATTTGCATAAGAAATTTGTTTGTGCTGTTAATCAACTTGGTGCAGACAGGGCTGTTCCGAAGAAAATACTTGAGCTGATGAATATTGAAGGGATTACCAGAGAAAATGTAGCAAGCCATTTGCAGAAATATAGACTCTATCTGAAAAAGGCAACTCCCCATCATACTAGCATGGTTGCTGGACTGGGCGGTGGTAATGATTCTTACCTTCGGATGAGTGGAATAGATGGATATGCAGACTTTGGCACCTCAACCAGATCTGGAAGGATCGCAAGCACCACATTGCCGTCATATCCATCGAGCGGAGTTTTCGGTAGGCTGAATTCTCCAGCCGGCTTGAACATGAGAGGAATTAATTCTTCAACACTGATTCAGCCTGTTCAGTCTCAAAACATCAACAACTCCTGGATTCCTGCAAATCAAAGCTCAAGCTTATTACATGGCGTTCCAACCGAGCTTAACCAATCTAACCTAAACAATGGTGCAACTGGTATATCGCAGTTAAATCAAATAGATTCCACTGGATTTGCAACTGCTTCAGACTTTCAAGATAGTAGGGCTATTACCAGTTCTAATCAAGTCTCAAACCATCATCTGTTGTTGCAAGGAAATTCACAACAGACACACAATGCAGGGTCAGTCAGAAATCAGTCTTCTGTTGGATCTGCTTCCTTGGGAAACAGAAACATTACTATTGGCGGTTCTTCTAATTTTTTGGATTATAATCGGTGTAGTGAAAACTGGCAAAGTCAAGCTCAGTTACCTGAATTTCCTGCTAGTGCTTTGCCGGTATGCAAGTCTTTCAATAACGACCAACTGCCTCTCAATAACATTACTGCTTTTAACCAAAGCCCTCTTATCGCTAACAGTCCAGTTGACTTTTCGTCTGGAAACACAATCACTGCTGCTTTGGAGGAAGCCAGAAATGTGCCGAGATGCCAAGATGGCTTGATTGGGAATTTTATACAGCCTTCAAGTTATGCTCCGCGACAAAACTGGGCAGAAAATAAACCGGATTACAGCCAAAACACGAGTCGTCCCTTCAATCCTTTGAACTCACAGGTTTGTTCCAGTAGGGCATTGACAAATTCTGCGTCTCACAATATCAACCAAAGTAAAACAGTCTGCAGCAATAGAGTTGATGCATCTTTTGTTGATCATGTATATGGCGCTTCCACGTCAGTTGCCCAGTACCCCGAAGTTGAGAAATTCTCGTCAGACGTACAAGTCAACACGAATGATGCCTACAAGTTGGAGAAGATGAGGTCCCAAGTTGGATATGTTGAGGGTTTTGGAACCTTAGAAGACATAATGGGTGCAATAGTCAAAAGGGAGCAAATTGAGATGACATTGATGGATGGAGAAATGTGTTATGATGCATACCCTGTTGGATCATGCATTTGA
Protein sequence

>Msa0206450

MGVENQRRDEDGVVDRFPVGMRVLAVDDNPTCLKVLAKLLAECKYHVTTATNGFDALKMLRENRKNYDLVISDVAMPDMDGFKLLELVGLEMDLPVIMLSGYSDTSMVFKGVTHGACDYLVKPVRLEELRNIWQHVIRKKKTNSKDDNKASNEDKVPNISGGSNQNILENSADRNKRLGKRRKEQDEEEKEEEEDDEESEGSADGDEDDPSSQKKPRVVWSPDLHKKFVCAVNQLGADRAVPKKILELMNIEGITRENVASHLQKYRLYLKKATPHHTSMVAGLGGGNDSYLRMSGIDGYADFGTSTRSGRIASTTLPSYPSSGVFGRLNSPAGLNMRGINSSTLIQPVQSQNINNSWIPANQSSSLLHGVPTELNQSNLNNGATGISQLNQIDSTGFATASDFQDSRAITSSNQVSNHHLLLQGNSQQTHNAGSVRNQSSVGSASLGNRNITIGGSSNFLDYNRCSENWQSQAQLPEFPASALPVCKSFNNDQLPLNNITAFNQSPLIANSPVDFSSGNTITAALEEARNVPRCQDGLIGNFIQPSSYAPRQNWAENKPDYSQNTSRPFNPLNSQVCSSRALTNSASHNINQSKTVCSNRVDASFVDHVYGASTSVAQYPEVEKFSSDVQVNTNDAYKLEKMRSQVGYVEGFGTLEDIMGAIVKREQIEMTLMDGEMCYDAYPVGSCI*