Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108020 | XP_003623230.1 | 98.672 | 527 | 2 | 1 | 1 | 522 | 1 | 527 | 0.0 | 1043 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108020 | sp|Q940P8|TCPB_ARATH | 88.235 | 527 | 57 | 1 | 1 | 522 | 1 | 527 | 0.0 | 926 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108020 | G7KRA6 | 98.672 | 527 | 2 | 1 | 1 | 522 | 1 | 527 | 0.0 | 1043 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003610 | Msa1108020 | 0.813715 | 2.224506e-51 | -8.615850e-47 |
| Msa0238090 | Msa1108020 | 0.808696 | 2.727440e-50 | -8.615850e-47 |
| Msa1024180 | Msa1108020 | 0.877226 | 7.449631e-69 | -8.615850e-47 |
| Msa1108020 | Msa1152120 | 0.909546 | 5.055183e-82 | -8.615850e-47 |
| Msa1108020 | Msa1216090 | 0.804935 | 1.701100e-49 | -8.615850e-47 |
| Msa1108020 | Msa1216340 | 0.809593 | 1.752768e-50 | -8.615850e-47 |
| Msa1108020 | Msa1462490 | 0.821271 | 4.412895e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108020 | MtrunA17_Chr7g0241881 | 98.672 | 527 | 2 | 1 | 1 | 522 | 1 | 527 | 0.0 | 1043 |
| Msa1108020 | MtrunA17_Chr7g0272821 | 97.154 | 527 | 10 | 1 | 1 | 522 | 1 | 527 | 0.0 | 1025 |
| Msa1108020 | MtrunA17_Chr5g0440381 | 36.450 | 524 | 307 | 10 | 6 | 511 | 11 | 526 | 1.48e-97 | 306 |
| Msa1108020 | MtrunA17_Chr8g0380331 | 34.915 | 527 | 307 | 10 | 14 | 511 | 15 | 534 | 4.11e-88 | 281 |
| Msa1108020 | MtrunA17_Chr3g0123341 | 33.142 | 522 | 330 | 8 | 6 | 512 | 14 | 531 | 5.32e-82 | 265 |
| Msa1108020 | MtrunA17_Chr3g0139481 | 32.265 | 499 | 281 | 7 | 20 | 512 | 26 | 473 | 2.37e-69 | 230 |
| Msa1108020 | MtrunA17_Chr2g0282161 | 29.735 | 528 | 340 | 11 | 6 | 512 | 7 | 524 | 2.03e-62 | 213 |
| Msa1108020 | MtrunA17_Chr7g0214841 | 30.237 | 506 | 326 | 8 | 27 | 511 | 26 | 525 | 7.72e-61 | 209 |
| Msa1108020 | MtrunA17_Chr6g0461541 | 28.916 | 498 | 336 | 8 | 30 | 515 | 33 | 524 | 5.38e-52 | 185 |
| Msa1108020 | MtrunA17_Chr1g0160221 | 28.257 | 499 | 338 | 8 | 30 | 515 | 36 | 527 | 4.48e-51 | 182 |
| Msa1108020 | MtrunA17_Chr3g0106681 | 86.076 | 79 | 6 | 1 | 380 | 453 | 54 | 132 | 5.14e-38 | 135 |
| Msa1108020 | MtrunA17_Chr7g0241851 | 86.765 | 68 | 9 | 0 | 357 | 424 | 1 | 68 | 1.59e-36 | 130 |
| Msa1108020 | MtrunA17_Chr8g0392171 | 29.470 | 302 | 181 | 7 | 185 | 480 | 3 | 278 | 3.10e-35 | 133 |
| Msa1108020 | MtrunA17_Chr1g0196761 | 24.687 | 559 | 331 | 22 | 16 | 520 | 40 | 562 | 5.00e-14 | 74.7 |
| Msa1108020 | MtrunA17_Chr8g0342341 | 23.606 | 538 | 331 | 17 | 16 | 504 | 41 | 547 | 1.79e-13 | 72.8 |
| Msa1108020 | MtrunA17_Chr1g0196751 | 22.857 | 560 | 340 | 21 | 16 | 520 | 40 | 562 | 1.99e-13 | 72.8 |
| Msa1108020 | MtrunA17_Chr7g0241861 | 83.019 | 53 | 9 | 0 | 234 | 286 | 1 | 53 | 2.59e-11 | 58.9 |
| Msa1108020 | MtrunA17_Chr1g0152151 | 36.434 | 129 | 74 | 3 | 26 | 148 | 65 | 191 | 4.77e-11 | 65.5 |
| Msa1108020 | MtrunA17_Chr1g0152141 | 35.659 | 129 | 75 | 3 | 26 | 148 | 65 | 191 | 9.66e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108020 | AT5G20890.1 | 88.235 | 527 | 57 | 1 | 1 | 522 | 1 | 527 | 0.0 | 926 |
| Msa1108020 | AT3G20050.1 | 34.981 | 526 | 308 | 9 | 14 | 511 | 15 | 534 | 3.72e-93 | 294 |
| Msa1108020 | AT3G11830.1 | 36.346 | 520 | 313 | 8 | 6 | 511 | 11 | 526 | 1.25e-92 | 293 |
| Msa1108020 | AT3G11830.2 | 36.154 | 520 | 312 | 9 | 6 | 511 | 11 | 524 | 1.87e-90 | 288 |
| Msa1108020 | AT3G18190.1 | 34.816 | 517 | 313 | 8 | 14 | 512 | 24 | 534 | 1.78e-87 | 279 |
| Msa1108020 | AT1G24510.1 | 32.443 | 524 | 325 | 9 | 8 | 512 | 18 | 531 | 9.74e-81 | 262 |
| Msa1108020 | AT1G24510.3 | 32.000 | 475 | 296 | 8 | 57 | 512 | 12 | 478 | 6.13e-69 | 229 |
| Msa1108020 | AT1G24510.2 | 31.317 | 463 | 291 | 8 | 69 | 512 | 1 | 455 | 2.84e-63 | 214 |
| Msa1108020 | AT3G02530.1 | 30.561 | 517 | 310 | 12 | 27 | 511 | 26 | 525 | 3.10e-62 | 213 |
| Msa1108020 | AT5G16070.1 | 30.608 | 526 | 313 | 14 | 27 | 519 | 26 | 532 | 2.40e-61 | 211 |
| Msa1108020 | AT5G26360.1 | 29.468 | 526 | 344 | 11 | 6 | 512 | 7 | 524 | 2.94e-57 | 200 |
| Msa1108020 | AT3G03960.1 | 28.514 | 498 | 338 | 8 | 30 | 515 | 39 | 530 | 2.33e-49 | 178 |
| Msa1108020 | AT2G33210.1 | 24.865 | 555 | 329 | 23 | 16 | 517 | 40 | 559 | 1.40e-17 | 86.3 |
| Msa1108020 | AT3G23990.1 | 24.501 | 551 | 334 | 19 | 16 | 516 | 39 | 557 | 3.90e-17 | 85.1 |
| Msa1108020 | AT2G33210.2 | 24.727 | 550 | 331 | 22 | 16 | 517 | 40 | 554 | 3.39e-16 | 82.0 |
| Msa1108020 | AT3G13470.1 | 37.069 | 116 | 65 | 3 | 26 | 136 | 70 | 182 | 8.90e-11 | 65.1 |
Find 144 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGGTTGTATTTGTAATT+TGG | 0.107433 | 7_3:-50501293 | Msa1108020:five_prime_UTR |
| GATCCCAGATTGCAAATTTC+TGG | 0.174620 | 7_3:+50496099 | None:intergenic |
| TCCTTTGCCATTACCATTTC+AGG | 0.181073 | 7_3:+50496989 | None:intergenic |
| TTTATTCTTGACAAGAAAAT+TGG | 0.237404 | 7_3:-50498124 | Msa1108020:CDS |
| AGCTAGCACCCAGGTGAAAA+AGG | 0.260140 | 7_3:+50495966 | None:intergenic |
| TCTAGCTGCCAACTGGAATT+TGG | 0.269473 | 7_3:-50495888 | Msa1108020:three_prime_UTR |
| CTTTGCATTCTCTATGCGTT+TGG | 0.270372 | 7_3:+50498090 | None:intergenic |
| CTCCGGGTTTCTTTATAATC+TGG | 0.272773 | 7_3:+50498414 | None:intergenic |
| CTTGTCTTGCGAGAGAATTT+TGG | 0.272978 | 7_3:+50499234 | None:intergenic |
| TGTTATATTTCACGTGTCTT+TGG | 0.298463 | 7_3:-50495921 | Msa1108020:three_prime_UTR |
| CTTTGCTGATGCAGGAATAT+TGG | 0.298904 | 7_3:-50497867 | Msa1108020:CDS |
| AATCTGGACAGATTCTAAAT+TGG | 0.300526 | 7_3:+50498430 | None:intergenic |
| GGCCATGGCTATTGCTGATT+TGG | 0.312243 | 7_3:-50500511 | Msa1108020:CDS |
| GAGCGTCTGGCTCTGGTAAC+TGG | 0.330579 | 7_3:-50497815 | Msa1108020:CDS |
| TTATGATTTCATCGACTCTA+AGG | 0.332845 | 7_3:+50496217 | None:intergenic |
| ATTCTGTAGTGATTTGCTTT+TGG | 0.338766 | 7_3:+50496071 | None:intergenic |
| TTTGCATTCTCTATGCGTTT+GGG | 0.352812 | 7_3:+50498091 | None:intergenic |
| CCGTGTTCGTGTCGACTCTA+TGG | 0.366141 | 7_3:-50498014 | Msa1108020:CDS |
| GCATTATCAGCAATGGTTGT+TGG | 0.371197 | 7_3:+50496887 | None:intergenic |
| GATTTGGTTAAGACTACTTT+AGG | 0.374985 | 7_3:-50500495 | Msa1108020:CDS |
| CTTGACAAGAAAATTGGTAT+TGG | 0.380814 | 7_3:-50498118 | Msa1108020:CDS |
| CTCTAACCGTTTAAATCAAC+TGG | 0.381070 | 7_3:-50496043 | Msa1108020:three_prime_UTR |
| GCATCAGCAAAGAGCTCCTC+TGG | 0.385618 | 7_3:+50497878 | None:intergenic |
| ATTCTGTCTTCTCTCCTCCT+TGG | 0.391078 | 7_3:+50496186 | None:intergenic |
| ACCTCTGTTGTTGTATTGGC+TGG | 0.392667 | 7_3:-50500208 | Msa1108020:CDS |
| GAAAAGGTGAACAAGATAAT+AGG | 0.393726 | 7_3:-50497947 | Msa1108020:CDS |
| TTTCCAGAAATTTGCAATCT+GGG | 0.395250 | 7_3:-50496102 | Msa1108020:three_prime_UTR |
| CATTATCAGCAATGGTTGTT+GGG | 0.396407 | 7_3:+50496888 | None:intergenic |
| CAGCAGTACATCCCTCGTTC+TGG | 0.402972 | 7_3:+50496819 | None:intergenic |
| TAATGTTGTTTGAGTGTTAG+TGG | 0.403034 | 7_3:-50495823 | Msa1108020:three_prime_UTR |
| GAAAGGAGAGCGGGCGAGAA+TGG | 0.403189 | 7_3:-50500804 | Msa1108020:intron |
| AAAGCAAATCACTACAGAAT+TGG | 0.404992 | 7_3:-50496068 | Msa1108020:three_prime_UTR |
| GGTTGGAGACATGTTTCAAC+GGG | 0.423103 | 7_3:-50496307 | Msa1108020:CDS |
| CTTATTGAAGAGATTATGAT+TGG | 0.428527 | 7_3:-50497734 | Msa1108020:CDS |
| GAAGGAGAAAATGAAAGAAA+AGG | 0.438401 | 7_3:-50497963 | Msa1108020:CDS |
| TTGTGACCAGTTGATTTAAA+CGG | 0.438938 | 7_3:+50496037 | None:intergenic |
| AACAACCTCTGTTGTTGTAT+TGG | 0.439127 | 7_3:-50500212 | Msa1108020:CDS |
| GAGGAGCTCTTTGCTGATGC+AGG | 0.439320 | 7_3:-50497875 | Msa1108020:CDS |
| GATAAAATTCTGCAGTCAAC+GGG | 0.441555 | 7_3:-50500361 | Msa1108020:CDS |
| TGGAGGCGGGTGGCCTGAAA+TGG | 0.444431 | 7_3:-50497002 | Msa1108020:CDS |
| TTCTGGTGTTGCAATGGGGC+AGG | 0.444806 | 7_3:-50497690 | Msa1108020:CDS |
| CCTCTGTTGTTGTATTGGCT+GGG | 0.445522 | 7_3:-50500207 | Msa1108020:CDS |
| TTCAGATGCTCGCCATGCCT+TGG | 0.446370 | 7_3:-50496138 | Msa1108020:intron |
| ACAGACAAGGTGAAGATATA+CGG | 0.446868 | 7_3:-50498040 | Msa1108020:CDS |
| GAACCTGCTATTATAGTCAT+TGG | 0.450616 | 7_3:+50500139 | None:intergenic |
| CGAGAGAGAGTTGGCTGGCT+AGG | 0.455761 | 7_3:+50501235 | None:intergenic |
| CTCAGACTGTCAATGATAGC+AGG | 0.455917 | 7_3:-50497033 | Msa1108020:CDS |
| GCTGGAATTGATGTCATCTC+TGG | 0.462467 | 7_3:-50496800 | Msa1108020:CDS |
| TGAGTCTATCAGTGATCCTC+CGG | 0.463023 | 7_3:+50498397 | None:intergenic |
| AATGATAGCAGGGTGTTACT+TGG | 0.464868 | 7_3:-50497022 | Msa1108020:CDS |
| GGCAAAGGAAATTGATGCAT+TGG | 0.465686 | 7_3:-50496975 | Msa1108020:CDS |
| GTATCAGTCTAGCTGCCAAC+TGG | 0.466560 | 7_3:-50495895 | Msa1108020:three_prime_UTR |
| GATGAAGCAAGTGAAGAGAA+AGG | 0.472529 | 7_3:-50500821 | Msa1108020:CDS |
| TGCCCAAGCTTAACAGACTC+AGG | 0.474350 | 7_3:+50497764 | None:intergenic |
| TTGGGATAGCCAAGAGTGCC+CGG | 0.474753 | 7_3:+50496906 | None:intergenic |
| AACCCTGAGTCTGTTAAGCT+TGG | 0.475389 | 7_3:-50497767 | Msa1108020:CDS |
| TTTAAGGGAGGCAGAAAAGT+TGG | 0.477988 | 7_3:-50500179 | Msa1108020:CDS |
| GCTAAAGTTGCTGAGATTGA+AGG | 0.478957 | 7_3:-50497992 | Msa1108020:CDS |
| AGCAGGGTGTTACTTGGAGG+CGG | 0.483620 | 7_3:-50497016 | Msa1108020:CDS |
| AAAGTTCAAGATGATGAAGT+TGG | 0.486158 | 7_3:-50500241 | Msa1108020:CDS |
| CTCTGTTGTTGTATTGGCTG+GGG | 0.488885 | 7_3:-50500206 | Msa1108020:CDS |
| TGGTATTGAGCGTCTGGCTC+TGG | 0.490993 | 7_3:-50497822 | Msa1108020:CDS |
| CAGCTGGGTTATCAATATGA+AGG | 0.502529 | 7_3:+50500287 | None:intergenic |
| CATTGCTGATAATGCTGGAT+TGG | 0.503219 | 7_3:-50496879 | Msa1108020:CDS |
| ACCCTGAGTCTGTTAAGCTT+GGG | 0.506927 | 7_3:-50497766 | Msa1108020:CDS |
| ACAACCATTGCTGATAATGC+TGG | 0.508371 | 7_3:-50496884 | Msa1108020:CDS |
| CAGAACGAGGGATGTACTGC+TGG | 0.510419 | 7_3:-50496818 | Msa1108020:CDS |
| TCAACGAGGACTTTAGCAGC+TGG | 0.514395 | 7_3:+50500271 | None:intergenic |
| ATTCTGCAGTCAACGGGTAG+AGG | 0.514855 | 7_3:-50500355 | Msa1108020:CDS |
| TGAGATTGAAGGAGCTGAGA+AGG | 0.516192 | 7_3:-50497981 | Msa1108020:CDS |
| AAGTGAAGAGAAAGGAGAGC+GGG | 0.523721 | 7_3:-50500813 | Msa1108020:CDS |
| AACCGCTAGTACATTCATTG+AGG | 0.528642 | 7_3:+50495855 | None:intergenic |
| AAGACTACTTTAGGCCCAAA+GGG | 0.529114 | 7_3:-50500486 | Msa1108020:CDS |
| CCTCGTTCTGGTGCTCAGCA+CGG | 0.531696 | 7_3:+50496831 | None:intergenic |
| GAGCACACTCAGCCGCCATT+CGG | 0.533449 | 7_3:+50499507 | None:intergenic |
| TACTTTAGGCCCAAAGGGAA+TGG | 0.535288 | 7_3:-50500481 | Msa1108020:intron |
| CGGGTGGCCTGAAATGGTAA+TGG | 0.539649 | 7_3:-50496996 | Msa1108020:CDS |
| GGATAAAATTCTGCAGTCAA+CGG | 0.542081 | 7_3:-50500362 | Msa1108020:CDS |
| CATCCAATGACTATAATAGC+AGG | 0.543016 | 7_3:-50500142 | Msa1108020:intron |
| TGAAGCATTCAAAGTCAAGC+AGG | 0.543590 | 7_3:-50496277 | Msa1108020:CDS |
| AACTACGAAACCTAAAACAA+GGG | 0.551083 | 7_3:-50501310 | Msa1108020:five_prime_UTR |
| TGTATTGCTATCTGCAACAG+AGG | 0.552549 | 7_3:-50496253 | Msa1108020:CDS |
| GGGTGTTACTTGGAGGCGGG+TGG | 0.558203 | 7_3:-50497012 | Msa1108020:CDS |
| CAACGAGGACTTTAGCAGCT+GGG | 0.558853 | 7_3:+50500272 | None:intergenic |
| ATGACCTCTCAGCCTCATCA+AGG | 0.561780 | 7_3:+50497080 | None:intergenic |
| GATAGCAGGGTGTTACTTGG+AGG | 0.563489 | 7_3:-50497019 | Msa1108020:CDS |
| TGTCAGAATTTGCCAAGGCA+TGG | 0.567393 | 7_3:+50496126 | None:intergenic |
| CAAAATTCTCTCGCAAGACA+AGG | 0.569659 | 7_3:-50499233 | Msa1108020:CDS |
| AGCTGGGTTATCAATATGAA+GGG | 0.569845 | 7_3:+50500288 | None:intergenic |
| CAAGATGATGAAGTTGGCGA+TGG | 0.570613 | 7_3:-50500235 | Msa1108020:CDS |
| TTCTGCAGTCAACGGGTAGA+GGG | 0.570922 | 7_3:-50500354 | Msa1108020:CDS |
| CAATAGTTCTGAGAGGTGCT+AGG | 0.574201 | 7_3:-50497661 | Msa1108020:intron |
| GCCTGAAATGGTAATGGCAA+AGG | 0.576296 | 7_3:-50496990 | Msa1108020:CDS |
| TAGACTTGATGAACATTGCA+AGG | 0.577688 | 7_3:-50499270 | Msa1108020:CDS |
| TGAAGAGATTATGATTGGTG+AGG | 0.578048 | 7_3:-50497729 | Msa1108020:CDS |
| AACAGACTCAGGGTTGTCAA+AGG | 0.580150 | 7_3:+50497775 | None:intergenic |
| GCAGGGTGTTACTTGGAGGC+GGG | 0.586668 | 7_3:-50497015 | Msa1108020:CDS |
| CAATCCAGCATTATCAGCAA+TGG | 0.589615 | 7_3:+50496880 | None:intergenic |
| TGCATTGGTAGAGAAGGTTG+TGG | 0.590099 | 7_3:-50499480 | Msa1108020:CDS |
| GTGAACAAGATAATAGGTCA+TGG | 0.590525 | 7_3:-50497941 | Msa1108020:CDS |
| GCATTGGCTAGAAAGACTCC+AGG | 0.593187 | 7_3:-50496959 | Msa1108020:CDS |
| CATCAGCAAAGAGCTCCTCT+GGG | 0.593588 | 7_3:+50497879 | None:intergenic |
| AAATCATAACTTGTGCTCCA+AGG | 0.594768 | 7_3:-50496203 | Msa1108020:CDS |
| AAGCGCGAGAGAGAGTTGGC+TGG | 0.595357 | 7_3:+50501230 | None:intergenic |
| TAGAAAGCGCGAGAGAGAGT+TGG | 0.596352 | 7_3:+50501226 | None:intergenic |
| TCAGACTGTCAATGATAGCA+GGG | 0.596838 | 7_3:-50497032 | Msa1108020:CDS |
| CATAGAGTCGACACGAACAC+GGG | 0.600968 | 7_3:+50498015 | None:intergenic |
| CCATAGAGTCGACACGAACA+CGG | 0.601800 | 7_3:+50498014 | None:intergenic |
| TAAGACTACTTTAGGCCCAA+AGG | 0.603320 | 7_3:-50500487 | Msa1108020:CDS |
| GTGGACAACAAAGAAGATGC+TGG | 0.604567 | 7_3:-50499461 | Msa1108020:intron |
| GAGTCTATCAGTGATCCTCC+GGG | 0.604779 | 7_3:+50498398 | None:intergenic |
| GAAGTTACTGTTACTAATGA+CGG | 0.604825 | 7_3:-50500328 | Msa1108020:CDS |
| CCGTGCTGAGCACCAGAACG+AGG | 0.605089 | 7_3:-50496831 | Msa1108020:CDS |
| TCAAATAGCCAAATTCCAGT+TGG | 0.605931 | 7_3:+50495880 | None:intergenic |
| GCCCAAGCTTAACAGACTCA+GGG | 0.607943 | 7_3:+50497765 | None:intergenic |
| TCGTAATGCATTGGTAGAGA+AGG | 0.612856 | 7_3:-50499486 | Msa1108020:CDS |
| AGGTTGGAGACATGTTTCAA+CGG | 0.614227 | 7_3:-50496308 | Msa1108020:CDS |
| GAACTACGAAACCTAAAACA+AGG | 0.615977 | 7_3:-50501311 | Msa1108020:five_prime_UTR |
| CAGCCACCATGTCCTTGATG+AGG | 0.616535 | 7_3:-50497092 | Msa1108020:CDS |
| CACTGCAATGGACACAGACA+AGG | 0.617081 | 7_3:-50498053 | Msa1108020:CDS |
| ACTAGTTGCAAACACTGCAA+TGG | 0.618834 | 7_3:-50498065 | Msa1108020:CDS |
| AACCAAATCAGCAATAGCCA+TGG | 0.624842 | 7_3:+50500509 | None:intergenic |
| TGGGATAGCCAAGAGTGCCC+GGG | 0.629291 | 7_3:+50496907 | None:intergenic |
| GTCCAGATTATAAAGAAACC+CGG | 0.629624 | 7_3:-50498416 | Msa1108020:CDS |
| TCTCAGCCTCATCAAGGACA+TGG | 0.634180 | 7_3:+50497086 | None:intergenic |
| TCATTGCATTTCACTCTCTG+AGG | 0.634791 | 7_3:-50501198 | Msa1108020:intron |
| TCATTGAGTTCTCACAATGG+CGG | 0.635158 | 7_3:-50500960 | Msa1108020:intron |
| TGAGTGTGCTCGTAATGCAT+TGG | 0.636791 | 7_3:-50499495 | Msa1108020:CDS |
| ATCCTCAATGAATGTACTAG+CGG | 0.642731 | 7_3:-50495857 | Msa1108020:three_prime_UTR |
| GAAAATGTCAGAATTTGCCA+AGG | 0.643026 | 7_3:+50496121 | None:intergenic |
| CAAGTGAAGAGAAAGGAGAG+CGG | 0.646384 | 7_3:-50500814 | Msa1108020:CDS |
| CGTGCTGAGCACCAGAACGA+GGG | 0.655321 | 7_3:-50496830 | Msa1108020:CDS |
| CAGCCTCATCAAGGACATGG+TGG | 0.656164 | 7_3:+50497089 | None:intergenic |
| ATGTCCTTGATGAGGCTGAG+AGG | 0.658084 | 7_3:-50497084 | Msa1108020:CDS |
| CGTCTGGCTCTGGTAACTGG+TGG | 0.662358 | 7_3:-50497812 | Msa1108020:CDS |
| ATTGCTATCTGCAACAGAGG+CGG | 0.662677 | 7_3:-50496250 | Msa1108020:CDS |
| TCATAACTTGTGCTCCAAGG+AGG | 0.680461 | 7_3:-50496200 | Msa1108020:CDS |
| ATTTCATTGAGTTCTCACAA+TGG | 0.696935 | 7_3:-50500963 | Msa1108020:exon |
| CCCAGCCAATACAACAACAG+AGG | 0.708815 | 7_3:+50500207 | None:intergenic |
| GTTGATTTACAATTTCCCAG+AGG | 0.717017 | 7_3:-50497894 | Msa1108020:CDS |
| GCATGCACAATAGTTCTGAG+AGG | 0.722642 | 7_3:-50497668 | Msa1108020:CDS |
| CAGATTATAAAGAAACCCGG+AGG | 0.754428 | 7_3:-50498413 | Msa1108020:CDS |
| GTTGGAGACATGTTTCAACG+GGG | 0.797013 | 7_3:-50496306 | Msa1108020:CDS |
| GAACTTTAGAAATGTCAACG+AGG | 0.815142 | 7_3:+50500257 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAAAAAAATTAAATA+AGG | + | chr7_3:50496198-50496217 | None:intergenic | 0.0% |
| !!! | ATTTTTTTTTAATTTATATT+TGG | - | chr7_3:50496204-50496223 | Msa1108020:CDS | 0.0% |
| !! | TACATAATCAATCATAAAAA+GGG | + | chr7_3:50496071-50496090 | None:intergenic | 15.0% |
| !! | TTACATAATCAATCATAAAA+AGG | + | chr7_3:50496072-50496091 | None:intergenic | 15.0% |
| !!! | TTTTATGATTGATTATGTAA+CGG | - | chr7_3:50496072-50496091 | Msa1108020:three_prime_UTR | 15.0% |
| !! | AAAGTTTATCAGAATTATAA+AGG | + | chr7_3:50497435-50497454 | None:intergenic | 15.0% |
| !! | ATCAATATATTTGACATTAT+CGG | - | chr7_3:50497547-50497566 | Msa1108020:intron | 15.0% |
| !!! | TATCTTATACATAAATTTTC+TGG | - | chr7_3:50497780-50497799 | Msa1108020:CDS | 15.0% |
| !!! | ATTTTAGAAAAATATCATGT+AGG | - | chr7_3:50500692-50500711 | Msa1108020:intron | 15.0% |
| !! | ACATAATCAATCATAAAAAG+GGG | + | chr7_3:50496070-50496089 | None:intergenic | 20.0% |
| !! | TTTATGATTGATTATGTAAC+GGG | - | chr7_3:50496073-50496092 | Msa1108020:three_prime_UTR | 20.0% |
| !! | ATATTTGGAAATTTATTGTG+CGG | - | chr7_3:50496219-50496238 | Msa1108020:CDS | 20.0% |
| !! | AACTAATTGTGTTTATGAAT+TGG | - | chr7_3:50496536-50496555 | Msa1108020:intron | 20.0% |
| !! | AACTAAGTAATTCACATATT+TGG | - | chr7_3:50496696-50496715 | Msa1108020:intron | 20.0% |
| !! | ACTAAGTAATTCACATATTT+GGG | - | chr7_3:50496697-50496716 | Msa1108020:intron | 20.0% |
| !! | CCTTAATTTAATTACAAAGA+TGG | + | chr7_3:50497193-50497212 | None:intergenic | 20.0% |
| !! | CCATCTTTGTAATTAAATTA+AGG | - | chr7_3:50497190-50497209 | Msa1108020:intron | 20.0% |
| !! | TGAGTAAAAAGTAAAAATTG+TGG | - | chr7_3:50497358-50497377 | Msa1108020:intron | 20.0% |
| !! | GAGTAAAAAGTAAAAATTGT+GGG | - | chr7_3:50497359-50497378 | Msa1108020:intron | 20.0% |
| !!! | AATGATAACGATAAATTCAA+AGG | + | chr7_3:50497705-50497724 | None:intergenic | 20.0% |
| !!! | AAGAATGGATTATAAATTGT+AGG | + | chr7_3:50498257-50498276 | None:intergenic | 20.0% |
| !! | CTATGTACATATTATAAGAA+TGG | + | chr7_3:50498272-50498291 | None:intergenic | 20.0% |
| !!! | ATTTCCATTTTCATATTACA+GGG | - | chr7_3:50498636-50498655 | Msa1108020:intron | 20.0% |
| !!! | TAGTATTTCTGTTTCTAAAT+TGG | - | chr7_3:50498929-50498948 | Msa1108020:intron | 20.0% |
| !! | TTTATTCTTGACAAGAAAAT+TGG | - | chr7_3:50498970-50498989 | Msa1108020:intron | 20.0% |
| !! | GAATTTACAATGACAAAAAA+AGG | + | chr7_3:50499466-50499485 | None:intergenic | 20.0% |
| !! | AATATGTAAAAGAACAACAT+TGG | + | chr7_3:50499493-50499512 | None:intergenic | 20.0% |
| !! | TTTATTGAAGGTTAATGTAA+AGG | - | chr7_3:50499656-50499675 | Msa1108020:intron | 20.0% |
| !!! | TCATTCTATAATCTTTTTCT+TGG | - | chr7_3:50500353-50500372 | Msa1108020:CDS | 20.0% |
| ! | TTATGATTGATTATGTAACG+GGG | - | chr7_3:50496074-50496093 | Msa1108020:three_prime_UTR | 25.0% |
| !!! | GTGTATTTATCATTTTTTGC+AGG | - | chr7_3:50496097-50496116 | Msa1108020:three_prime_UTR | 25.0% |
| !!! | TATTCACTTTGGAATTGTAT+TGG | - | chr7_3:50496349-50496368 | Msa1108020:intron | 25.0% |
| !! | AAAATTTTACCATTCCCTTT+GGG | + | chr7_3:50496625-50496644 | None:intergenic | 25.0% |
| !! | TATGTGAATTACTTAGTTCT+TGG | + | chr7_3:50496694-50496713 | None:intergenic | 25.0% |
| ! | ACAATATGCATAAAACATCA+GGG | + | chr7_3:50497080-50497099 | None:intergenic | 25.0% |
| ! | TACAATATGCATAAAACATC+AGG | + | chr7_3:50497081-50497100 | None:intergenic | 25.0% |
| ! | TTGTACATAAGATCTTTCTT+TGG | - | chr7_3:50497096-50497115 | Msa1108020:intron | 25.0% |
| ! | ATTAAGGACCAATTTATTGA+TGG | - | chr7_3:50497206-50497225 | Msa1108020:intron | 25.0% |
| !!! | ATTTCAGTTTTTTCTTTCCA+AGG | - | chr7_3:50497270-50497289 | Msa1108020:intron | 25.0% |
| ! | AACTAAAGGAAGAATAAAAG+TGG | + | chr7_3:50497299-50497318 | None:intergenic | 25.0% |
| !! | CTTTTATTCTTCCTTTAGTT+TGG | - | chr7_3:50497299-50497318 | Msa1108020:intron | 25.0% |
| !!! | TTACTTTTTACTCATCTTTC+AGG | + | chr7_3:50497352-50497371 | None:intergenic | 25.0% |
| !! | AAAGCATCAAAGTTTGATAA+TGG | - | chr7_3:50497397-50497416 | Msa1108020:intron | 25.0% |
| !! | CATTATCGGATATGATTTTT+AGG | - | chr7_3:50497561-50497580 | Msa1108020:intron | 25.0% |
| ! | AATTGGACACATTATTAGTA+GGG | + | chr7_3:50498052-50498071 | None:intergenic | 25.0% |
| ! | AAATTGGACACATTATTAGT+AGG | + | chr7_3:50498053-50498072 | None:intergenic | 25.0% |
| !! | AATAATGTGTCCAATTTTGA+TGG | - | chr7_3:50498056-50498075 | Msa1108020:CDS | 25.0% |
| ! | TTTGCTAAATCCATCAAAAT+TGG | + | chr7_3:50498069-50498088 | None:intergenic | 25.0% |
| !! | TATATACTTTTCTGCATGAT+TGG | - | chr7_3:50498174-50498193 | Msa1108020:intron | 25.0% |
| !!! | GTGTGTTTTATTTAGAAATC+TGG | - | chr7_3:50498211-50498230 | Msa1108020:intron | 25.0% |
| ! | TTAGAAAACTGAAAAAACTG+TGG | + | chr7_3:50498321-50498340 | None:intergenic | 25.0% |
| ! | TAAACGATATTCACTGATAA+GGG | - | chr7_3:50498382-50498401 | Msa1108020:intron | 25.0% |
| ! | AATGAAATACTCTTATAACC+TGG | + | chr7_3:50498429-50498448 | None:intergenic | 25.0% |
| !! | CATTTCCATTTTCATATTAC+AGG | - | chr7_3:50498635-50498654 | Msa1108020:intron | 25.0% |
| !!! | ATAGACTCATTTTTAGATGA+AGG | - | chr7_3:50498711-50498730 | Msa1108020:intron | 25.0% |
| !!! | TAGACTCATTTTTAGATGAA+GGG | - | chr7_3:50498712-50498731 | Msa1108020:intron | 25.0% |
| ! | GGGTAATATTACTGAAAATT+TGG | - | chr7_3:50498732-50498751 | Msa1108020:intron | 25.0% |
| !!! | CAATATTTTGAATTCAGTCA+AGG | + | chr7_3:50498857-50498876 | None:intergenic | 25.0% |
| ! | CTTATTGAAGAGATTATGAT+TGG | - | chr7_3:50499360-50499379 | Msa1108020:intron | 25.0% |
| !! | GATAAATTGATCAAGTTTTC+TGG | - | chr7_3:50499387-50499406 | Msa1108020:intron | 25.0% |
| !! | TGTTGTTCTTTTACATATTC+AGG | - | chr7_3:50499494-50499513 | Msa1108020:CDS | 25.0% |
| !! | GTTGTTCTTTTACATATTCA+GGG | - | chr7_3:50499495-50499514 | Msa1108020:CDS | 25.0% |
| !!! | TTTTTTTCCTTGAATTCTTG+AGG | - | chr7_3:50499519-50499538 | Msa1108020:intron | 25.0% |
| ! | AGCACAAAAACTGAATAAAA+GGG | + | chr7_3:50499634-50499653 | None:intergenic | 25.0% |
| !! | CTTCCTTTCTATTTTCTTTT+TGG | - | chr7_3:50500731-50500750 | Msa1108020:intron | 25.0% |
| ! | TAGCCAAAAAGAAAATAGAA+AGG | + | chr7_3:50500737-50500756 | None:intergenic | 25.0% |
| AACTACGAAACCTAAAACAA+GGG | - | chr7_3:50495784-50495803 | Msa1108020:three_prime_UTR | 30.0% | |
| !!! | ACAAATACAACCCTTGTTTT+AGG | + | chr7_3:50495797-50495816 | None:intergenic | 30.0% |
| CAAGGGTTGTATTTGTAATT+TGG | - | chr7_3:50495801-50495820 | Msa1108020:three_prime_UTR | 30.0% | |
| TTGAGTAGATAAATGAGATC+GGG | + | chr7_3:50495999-50496018 | None:intergenic | 30.0% | |
| GTTGAGTAGATAAATGAGAT+CGG | + | chr7_3:50496000-50496019 | None:intergenic | 30.0% | |
| AGTTTGGATTATTGACGTTA+GGG | + | chr7_3:50496022-50496041 | None:intergenic | 30.0% | |
| TATGATTGATTATGTAACGG+GGG | - | chr7_3:50496075-50496094 | Msa1108020:three_prime_UTR | 30.0% | |
| ATTTCATTGAGTTCTCACAA+TGG | - | chr7_3:50496131-50496150 | Msa1108020:intron | 30.0% | |
| TCATTGTGATGTATTCACTT+TGG | - | chr7_3:50496338-50496357 | Msa1108020:intron | 30.0% | |
| ! | GATTTGGTTAAGACTACTTT+AGG | - | chr7_3:50496599-50496618 | Msa1108020:intron | 30.0% |
| ! | GAAAATTTTACCATTCCCTT+TGG | + | chr7_3:50496626-50496645 | None:intergenic | 30.0% |
| GAAGTTACTGTTACTAATGA+CGG | - | chr7_3:50496766-50496785 | Msa1108020:intron | 30.0% | |
| AAAGTTCAAGATGATGAAGT+TGG | - | chr7_3:50496853-50496872 | Msa1108020:CDS | 30.0% | |
| AAGGTTAATTTCCTAACACT+CGG | + | chr7_3:50497009-50497028 | None:intergenic | 30.0% | |
| AGCAATTCAATTACTTGTCA+AGG | + | chr7_3:50497028-50497047 | None:intergenic | 30.0% | |
| GATCACATCCATCAATAAAT+TGG | + | chr7_3:50497217-50497236 | None:intergenic | 30.0% | |
| TGACAATGAAACCAAACTAA+AGG | + | chr7_3:50497313-50497332 | None:intergenic | 30.0% | |
| ! | TAGTTTGGTTTCATTGTCAA+CGG | - | chr7_3:50497314-50497333 | Msa1108020:intron | 30.0% |
| !!! | ATGATTTTTAGGTTTCCGAA+TGG | - | chr7_3:50497572-50497591 | Msa1108020:intron | 30.0% |
| !! | CTGGTATTTATTTTCCCTTT+TGG | - | chr7_3:50497652-50497671 | Msa1108020:intron | 30.0% |
| ! | TATTTTCCCTTTTGGATGTT+AGG | - | chr7_3:50497660-50497679 | Msa1108020:intron | 30.0% |
| AATTGTTATCTGTTTACAGC+AGG | - | chr7_3:50497727-50497746 | Msa1108020:CDS | 30.0% | |
| ATTGTTATCTGTTTACAGCA+GGG | - | chr7_3:50497728-50497747 | Msa1108020:CDS | 30.0% | |
| TGGATTTAGCAAATAGTGTA+TGG | - | chr7_3:50498076-50498095 | Msa1108020:CDS | 30.0% | |
| ATGAAGCAAAGAAGAAATCA+TGG | + | chr7_3:50498109-50498128 | None:intergenic | 30.0% | |
| AAGGATTGGAAGAAATTGAA+GGG | + | chr7_3:50498295-50498314 | None:intergenic | 30.0% | |
| GTAAACGATATTCACTGATA+AGG | - | chr7_3:50498381-50498400 | Msa1108020:intron | 30.0% | |
| !! | AACATGGTTATATTTTTGCC+AGG | - | chr7_3:50498408-50498427 | Msa1108020:CDS | 30.0% |
| AAGAACATTAGAACAAACTG+TGG | + | chr7_3:50498480-50498499 | None:intergenic | 30.0% | |
| TTACAAATATGCTATACGTC+AGG | - | chr7_3:50498556-50498575 | Msa1108020:intron | 30.0% | |
| AATCTGGACAGATTCTAAAT+TGG | + | chr7_3:50498667-50498686 | None:intergenic | 30.0% | |
| AATACAAAAGAAAAAACCGC+AGG | + | chr7_3:50498809-50498828 | None:intergenic | 30.0% | |
| ATTATGCAGGATAGTTAAGT+TGG | + | chr7_3:50498880-50498899 | None:intergenic | 30.0% | |
| ATACAAATGGTTCATTATGC+AGG | + | chr7_3:50498893-50498912 | None:intergenic | 30.0% | |
| TTTACCTAGAGTGATACAAA+TGG | + | chr7_3:50498906-50498925 | None:intergenic | 30.0% | |
| CTTGACAAGAAAATTGGTAT+TGG | - | chr7_3:50498976-50498995 | Msa1108020:intron | 30.0% | |
| GAAGGAGAAAATGAAAGAAA+AGG | - | chr7_3:50499131-50499150 | Msa1108020:intron | 30.0% | |
| GAAAAGGTGAACAAGATAAT+AGG | - | chr7_3:50499147-50499166 | Msa1108020:intron | 30.0% | |
| GTAAAAGAACAACATTGGAA+AGG | + | chr7_3:50499488-50499507 | None:intergenic | 30.0% | |
| AAGAAAACCTCAAGAATTCA+AGG | + | chr7_3:50499529-50499548 | None:intergenic | 30.0% | |
| ! | TTCTTGAGGTTTTCTTATTC+TGG | - | chr7_3:50499533-50499552 | Msa1108020:intron | 30.0% |
| CAGCACAAAAACTGAATAAA+AGG | + | chr7_3:50499635-50499654 | None:intergenic | 30.0% | |
| ! | CTTTTATTCAGTTTTTGTGC+TGG | - | chr7_3:50499633-50499652 | Msa1108020:intron | 30.0% |
| !!! | TTTTTGTGCTGGTTTATTGA+AGG | - | chr7_3:50499644-50499663 | Msa1108020:intron | 30.0% |
| CTTATAATCATTGAGTCCAA+TGG | - | chr7_3:50499756-50499775 | Msa1108020:intron | 30.0% | |
| ATAAAAAACAGTAAGGAGCA+GGG | + | chr7_3:50499875-50499894 | None:intergenic | 30.0% | |
| !!! | ATTGCAAGAGATTTTTTTCC+TGG | + | chr7_3:50500156-50500175 | None:intergenic | 30.0% |
| AGGAAAAAAATCTCTTGCAA+TGG | - | chr7_3:50500155-50500174 | Msa1108020:CDS | 30.0% | |
| AAAAAAATCTCTTGCAATGG+AGG | - | chr7_3:50500158-50500177 | Msa1108020:CDS | 30.0% | |
| TAATTAGATTTACTCCCTAG+TGG | - | chr7_3:50500491-50500510 | Msa1108020:CDS | 30.0% | |
| !! | TTATGATTTCATCGACTCTA+AGG | + | chr7_3:50500880-50500899 | None:intergenic | 30.0% |
| ! | TTTTCCAGAAATTTGCAATC+TGG | - | chr7_3:50500991-50501010 | Msa1108020:intron | 30.0% |
| TTTCCAGAAATTTGCAATCT+GGG | - | chr7_3:50500992-50501011 | Msa1108020:intron | 30.0% | |
| !!! | ATTCTGTAGTGATTTGCTTT+TGG | + | chr7_3:50501026-50501045 | None:intergenic | 30.0% |
| AAAGCAAATCACTACAGAAT+TGG | - | chr7_3:50501026-50501045 | Msa1108020:intron | 30.0% | |
| ! | TTGTGACCAGTTGATTTAAA+CGG | + | chr7_3:50501060-50501079 | None:intergenic | 30.0% |
| TGTTATATTTCACGTGTCTT+TGG | - | chr7_3:50501173-50501192 | Msa1108020:intron | 30.0% | |
| ! | TAATGTTGTTTGAGTGTTAG+TGG | - | chr7_3:50501271-50501290 | Msa1108020:five_prime_UTR | 30.0% |
| GAACTACGAAACCTAAAACA+AGG | - | chr7_3:50495783-50495802 | Msa1108020:three_prime_UTR | 35.0% | |
| AATGAGATCGGGAACAAAAA+AGG | + | chr7_3:50495988-50496007 | None:intergenic | 35.0% | |
| GAGTTTGGATTATTGACGTT+AGG | + | chr7_3:50496023-50496042 | None:intergenic | 35.0% | |
| CAATAATCCAAACTCTGTAG+TGG | - | chr7_3:50496028-50496047 | Msa1108020:three_prime_UTR | 35.0% | |
| !! | GTCATTTTCATGTGAGTCTA+CGG | - | chr7_3:50496497-50496516 | Msa1108020:intron | 35.0% |
| ! | TTTGTACAGTCGTCTTTTGT+TGG | - | chr7_3:50496560-50496579 | Msa1108020:intron | 35.0% |
| ! | TTGTACAGTCGTCTTTTGTT+GGG | - | chr7_3:50496561-50496580 | Msa1108020:intron | 35.0% |
| ! | ATATTTGGGATGATGTTTGC+AGG | - | chr7_3:50496711-50496730 | Msa1108020:intron | 35.0% |
| GGATAAAATTCTGCAGTCAA+CGG | - | chr7_3:50496732-50496751 | Msa1108020:intron | 35.0% | |
| GATAAAATTCTGCAGTCAAC+GGG | - | chr7_3:50496733-50496752 | Msa1108020:intron | 35.0% | |
| AGCTGGGTTATCAATATGAA+GGG | + | chr7_3:50496809-50496828 | None:intergenic | 35.0% | |
| ! | GAACTTTAGAAATGTCAACG+AGG | + | chr7_3:50496840-50496859 | None:intergenic | 35.0% |
| AACAACCTCTGTTGTTGTAT+TGG | - | chr7_3:50496882-50496901 | Msa1108020:CDS | 35.0% | |
| CATCCAATGACTATAATAGC+AGG | - | chr7_3:50496952-50496971 | Msa1108020:CDS | 35.0% | |
| GAACCTGCTATTATAGTCAT+TGG | + | chr7_3:50496958-50496977 | None:intergenic | 35.0% | |
| TCATCTTTCAGGAAGATGAA+TGG | + | chr7_3:50497341-50497360 | None:intergenic | 35.0% | |
| !!! | ATTTTTAGGTTTCCGAATGG+CGG | - | chr7_3:50497575-50497594 | Msa1108020:intron | 35.0% |
| GGTAAACCTAACATCCAAAA+GGG | + | chr7_3:50497669-50497688 | None:intergenic | 35.0% | |
| TGGTAAACCTAACATCCAAA+AGG | + | chr7_3:50497670-50497689 | None:intergenic | 35.0% | |
| TTGGATGTTAGGTTTACCAT+TGG | - | chr7_3:50497671-50497690 | Msa1108020:CDS | 35.0% | |
| ! | TGGATTTTGCAGAGAAATTC+AGG | - | chr7_3:50497800-50497819 | Msa1108020:CDS | 35.0% |
| TAGACTTGATGAACATTGCA+AGG | - | chr7_3:50497824-50497843 | Msa1108020:CDS | 35.0% | |
| AGATGCTGTAATGAGACTAA+AGG | - | chr7_3:50497906-50497925 | Msa1108020:CDS | 35.0% | |
| CACATTATTAGTAGGGTAGT+CGG | + | chr7_3:50498045-50498064 | None:intergenic | 35.0% | |
| CAAGGATTGGAAGAAATTGA+AGG | + | chr7_3:50498296-50498315 | None:intergenic | 35.0% | |
| AAAAACTGTGGTTCAAGGAT+TGG | + | chr7_3:50498309-50498328 | None:intergenic | 35.0% | |
| ACTGAAAAAACTGTGGTTCA+AGG | + | chr7_3:50498314-50498333 | None:intergenic | 35.0% | |
| ! | ATGATAGCTAGTTTGATCCT+TGG | - | chr7_3:50498350-50498369 | Msa1108020:intron | 35.0% |
| TTAGAACAAACTGTGGTTCA+AGG | + | chr7_3:50498473-50498492 | None:intergenic | 35.0% | |
| GCTTCCCTGTAATATGAAAA+TGG | + | chr7_3:50498643-50498662 | None:intergenic | 35.0% | |
| GTCCAGATTATAAAGAAACC+CGG | - | chr7_3:50498678-50498697 | Msa1108020:intron | 35.0% | |
| !!! | CTATCCTTTTTTGAAACCTG+CGG | - | chr7_3:50498790-50498809 | Msa1108020:intron | 35.0% |
| AAAACCGCAGGTTTCAAAAA+AGG | + | chr7_3:50498797-50498816 | None:intergenic | 35.0% | |
| TGAACCATTTGTATCACTCT+AGG | - | chr7_3:50498899-50498918 | Msa1108020:intron | 35.0% | |
| TTTGCATTCTCTATGCGTTT+GGG | + | chr7_3:50499006-50499025 | None:intergenic | 35.0% | |
| ACAGACAAGGTGAAGATATA+CGG | - | chr7_3:50499054-50499073 | Msa1108020:intron | 35.0% | |
| GTGAACAAGATAATAGGTCA+TGG | - | chr7_3:50499153-50499172 | Msa1108020:intron | 35.0% | |
| !! | GCATCAACTGTTTTGTTAAC+AGG | - | chr7_3:50499175-50499194 | Msa1108020:intron | 35.0% |
| ! | GTTGATTTACAATTTCCCAG+AGG | - | chr7_3:50499200-50499219 | Msa1108020:intron | 35.0% |
| !!! | ATTGAGCATGCTGATTTTGA+TGG | - | chr7_3:50499252-50499271 | Msa1108020:CDS | 35.0% |
| TGAAGAGATTATGATTGGTG+AGG | - | chr7_3:50499365-50499384 | Msa1108020:intron | 35.0% | |
| !!! | AAGTTTTCTGGTGTTGCAAT+GGG | - | chr7_3:50499399-50499418 | Msa1108020:intron | 35.0% |
| AAGCAGTCTAGTTAAACCAT+TGG | + | chr7_3:50499775-50499794 | None:intergenic | 35.0% | |
| CATAAAAAACAGTAAGGAGC+AGG | + | chr7_3:50499876-50499895 | None:intergenic | 35.0% | |
| !!! | CTGCTCCTTACTGTTTTTTA+TGG | - | chr7_3:50499874-50499893 | Msa1108020:intron | 35.0% |
| CGAAGCCATAAAAAACAGTA+AGG | + | chr7_3:50499882-50499901 | None:intergenic | 35.0% | |
| CATTATCAGCAATGGTTGTT+GGG | + | chr7_3:50500209-50500228 | None:intergenic | 35.0% | |
| ! | CTGGTCATTCATAGTGATTT+TGG | - | chr7_3:50500408-50500427 | Msa1108020:intron | 35.0% |
| GAGTTAGGATGTGTATGATA+GGG | - | chr7_3:50500522-50500541 | Msa1108020:CDS | 35.0% | |
| AGCCTCTCATATTATTCAGT+GGG | + | chr7_3:50500558-50500577 | None:intergenic | 35.0% | |
| AAGCCTCTCATATTATTCAG+TGG | + | chr7_3:50500559-50500578 | None:intergenic | 35.0% | |
| TCTCAAAAACTAGTTGCCAA+GGG | + | chr7_3:50500612-50500631 | None:intergenic | 35.0% | |
| TTCTCAAAAACTAGTTGCCA+AGG | + | chr7_3:50500613-50500632 | None:intergenic | 35.0% | |
| AAATCGCTCGTACATATACT+CGG | + | chr7_3:50500654-50500673 | None:intergenic | 35.0% | |
| ! | ATGTACGAGCGATTTTACAA+AGG | - | chr7_3:50500659-50500678 | Msa1108020:intron | 35.0% |
| ! | AAATCATAACTTGTGCTCCA+AGG | - | chr7_3:50500891-50500910 | Msa1108020:intron | 35.0% |
| GAAAATGTCAGAATTTGCCA+AGG | + | chr7_3:50500976-50500995 | None:intergenic | 35.0% | |
| CTCTAACCGTTTAAATCAAC+TGG | - | chr7_3:50501051-50501070 | Msa1108020:intron | 35.0% | |
| !! | TGTACATTTCCTTTTTCACC+TGG | - | chr7_3:50501119-50501138 | Msa1108020:intron | 35.0% |
| !! | GTACATTTCCTTTTTCACCT+GGG | - | chr7_3:50501120-50501139 | Msa1108020:intron | 35.0% |
| TCAAATAGCCAAATTCCAGT+TGG | + | chr7_3:50501217-50501236 | None:intergenic | 35.0% | |
| ATCCTCAATGAATGTACTAG+CGG | - | chr7_3:50501237-50501256 | Msa1108020:five_prime_UTR | 35.0% | |
| TCATTGCATTTCACTCTCTG+AGG | - | chr7_3:50495896-50495915 | Msa1108020:three_prime_UTR | 40.0% | |
| TAATCCAAACTCTGTAGTGG+TGG | - | chr7_3:50496031-50496050 | Msa1108020:three_prime_UTR | 40.0% | |
| TCATTGAGTTCTCACAATGG+CGG | - | chr7_3:50496134-50496153 | Msa1108020:intron | 40.0% | |
| GATGAAGCAAGTGAAGAGAA+AGG | - | chr7_3:50496273-50496292 | Msa1108020:CDS | 40.0% | |
| GAAATATTAGCTATGACGCG+TGG | + | chr7_3:50496469-50496488 | None:intergenic | 40.0% | |
| ! | TGTACAGTCGTCTTTTGTTG+GGG | - | chr7_3:50496562-50496581 | Msa1108020:intron | 40.0% |
| AACCAAATCAGCAATAGCCA+TGG | + | chr7_3:50496588-50496607 | None:intergenic | 40.0% | |
| TAAGACTACTTTAGGCCCAA+AGG | - | chr7_3:50496607-50496626 | Msa1108020:intron | 40.0% | |
| AAGACTACTTTAGGCCCAAA+GGG | - | chr7_3:50496608-50496627 | Msa1108020:intron | 40.0% | |
| CAGCTGGGTTATCAATATGA+AGG | + | chr7_3:50496810-50496829 | None:intergenic | 40.0% | |
| TTTAAGGGAGGCAGAAAAGT+TGG | - | chr7_3:50496915-50496934 | Msa1108020:CDS | 40.0% | |
| TGATTCACATTCCGAGTGTT+AGG | - | chr7_3:50496995-50497014 | Msa1108020:CDS | 40.0% | |
| AAACATCAGGGTAGACGATA+AGG | + | chr7_3:50497068-50497087 | None:intergenic | 40.0% | |
| AAGAATAAAAGTGGCAGCCT+TGG | + | chr7_3:50497290-50497309 | None:intergenic | 40.0% | |
| ACAGAAAACTGCAGTATGGA+CGG | + | chr7_3:50497477-50497496 | None:intergenic | 40.0% | |
| CATGACAGAAAACTGCAGTA+TGG | + | chr7_3:50497481-50497500 | None:intergenic | 40.0% | |
| ! | CTGCAGTTTTCTGTCATGTT+TGG | - | chr7_3:50497483-50497502 | Msa1108020:intron | 40.0% |
| ! | TCGTAATGCATTGGTAGAGA+AGG | - | chr7_3:50497608-50497627 | Msa1108020:intron | 40.0% |
| ! | CTTGTCTTGCGAGAGAATTT+TGG | + | chr7_3:50497863-50497882 | None:intergenic | 40.0% |
| CAAAATTCTCTCGCAAGACA+AGG | - | chr7_3:50497861-50497880 | Msa1108020:CDS | 40.0% | |
| ! | ATCGTTTACAAAGCACTCCA+AGG | + | chr7_3:50498370-50498389 | None:intergenic | 40.0% |
| TCACTGATAAGGGTTGAACA+TGG | - | chr7_3:50498392-50498411 | Msa1108020:CDS | 40.0% | |
| CTCCGGGTTTCTTTATAATC+TGG | + | chr7_3:50498683-50498702 | None:intergenic | 40.0% | |
| CAGATTATAAAGAAACCCGG+AGG | - | chr7_3:50498681-50498700 | Msa1108020:intron | 40.0% | |
| CTTTGCATTCTCTATGCGTT+TGG | + | chr7_3:50499007-50499026 | None:intergenic | 40.0% | |
| ACTAGTTGCAAACACTGCAA+TGG | - | chr7_3:50499029-50499048 | Msa1108020:intron | 40.0% | |
| GCTAAAGTTGCTGAGATTGA+AGG | - | chr7_3:50499102-50499121 | Msa1108020:intron | 40.0% | |
| CTTTGCTGATGCAGGAATAT+TGG | - | chr7_3:50499227-50499246 | Msa1108020:CDS | 40.0% | |
| !! | TTTTGATGGTATTGAGCGTC+TGG | - | chr7_3:50499266-50499285 | Msa1108020:CDS | 40.0% |
| !!! | CAAGTTTTCTGGTGTTGCAA+TGG | - | chr7_3:50499398-50499417 | Msa1108020:intron | 40.0% |
| !!! | AGTTTTCTGGTGTTGCAATG+GGG | - | chr7_3:50499400-50499419 | Msa1108020:intron | 40.0% |
| TTCGATCAATGCATTTGAGC+TGG | - | chr7_3:50499898-50499917 | Msa1108020:intron | 40.0% | |
| GCATTTGAGCTGGATATGTA+TGG | - | chr7_3:50499908-50499927 | Msa1108020:intron | 40.0% | |
| !!! | AAGCCTGACATCTGTTTTTG+TGG | - | chr7_3:50499979-50499998 | Msa1108020:intron | 40.0% |
| TCAGACTGTCAATGATAGCA+GGG | - | chr7_3:50500062-50500081 | Msa1108020:intron | 40.0% | |
| !! | AATGATAGCAGGGTGTTACT+TGG | - | chr7_3:50500072-50500091 | Msa1108020:intron | 40.0% |
| TCCTTTGCCATTACCATTTC+AGG | + | chr7_3:50500108-50500127 | None:intergenic | 40.0% | |
| GGCAAAGGAAATTGATGCAT+TGG | - | chr7_3:50500119-50500138 | Msa1108020:intron | 40.0% | |
| GCATTATCAGCAATGGTTGT+TGG | + | chr7_3:50500210-50500229 | None:intergenic | 40.0% | |
| ! | ACAACCATTGCTGATAATGC+TGG | - | chr7_3:50500210-50500229 | Msa1108020:CDS | 40.0% |
| CAATCCAGCATTATCAGCAA+TGG | + | chr7_3:50500217-50500236 | None:intergenic | 40.0% | |
| ! | CATTGCTGATAATGCTGGAT+TGG | - | chr7_3:50500215-50500234 | Msa1108020:CDS | 40.0% |
| TAACTCCACTGTATCCACTA+GGG | + | chr7_3:50500508-50500527 | None:intergenic | 40.0% | |
| GGAGTTAGGATGTGTATGAT+AGG | - | chr7_3:50500521-50500540 | Msa1108020:CDS | 40.0% | |
| GATGTGTATGATAGGGACTT+TGG | - | chr7_3:50500529-50500548 | Msa1108020:intron | 40.0% | |
| GTCCCACTGAATAATATGAG+AGG | - | chr7_3:50500553-50500572 | Msa1108020:intron | 40.0% | |
| GTGACTTGATTCTTTACCCT+TGG | - | chr7_3:50500593-50500612 | Msa1108020:intron | 40.0% | |
| AGGTTGGAGACATGTTTCAA+CGG | - | chr7_3:50500786-50500805 | Msa1108020:intron | 40.0% | |
| ! | TGAAGCATTCAAAGTCAAGC+AGG | - | chr7_3:50500817-50500836 | Msa1108020:CDS | 40.0% |
| TGTATTGCTATCTGCAACAG+AGG | - | chr7_3:50500841-50500860 | Msa1108020:CDS | 40.0% | |
| GATCCCAGATTGCAAATTTC+TGG | + | chr7_3:50500998-50501017 | None:intergenic | 40.0% | |
| AACCGCTAGTACATTCATTG+AGG | + | chr7_3:50501242-50501261 | None:intergenic | 40.0% | |
| GAAACCACCACTACAGAGTT+TGG | + | chr7_3:50496038-50496057 | None:intergenic | 45.0% | |
| CAAGTGAAGAGAAAGGAGAG+CGG | - | chr7_3:50496280-50496299 | Msa1108020:CDS | 45.0% | |
| AAGTGAAGAGAAAGGAGAGC+GGG | - | chr7_3:50496281-50496300 | Msa1108020:CDS | 45.0% | |
| CATGTGAGTCTACGGAAAGT+TGG | - | chr7_3:50496505-50496524 | Msa1108020:intron | 45.0% | |
| TACTTTAGGCCCAAAGGGAA+TGG | - | chr7_3:50496613-50496632 | Msa1108020:intron | 45.0% | |
| CAAGATGATGAAGTTGGCGA+TGG | - | chr7_3:50496859-50496878 | Msa1108020:CDS | 45.0% | |
| ! | ACCTCTGTTGTTGTATTGGC+TGG | - | chr7_3:50496886-50496905 | Msa1108020:CDS | 45.0% |
| !! | CCTCTGTTGTTGTATTGGCT+GGG | - | chr7_3:50496887-50496906 | Msa1108020:CDS | 45.0% |
| !! | CTCTGTTGTTGTATTGGCTG+GGG | - | chr7_3:50496888-50496907 | Msa1108020:CDS | 45.0% |
| !! | TATTGGCTGGGGAGCTTTTA+AGG | - | chr7_3:50496899-50496918 | Msa1108020:CDS | 45.0% |
| ! | ATTGGCTGGGGAGCTTTTAA+GGG | - | chr7_3:50496900-50496919 | Msa1108020:CDS | 45.0% |
| TGAGTGTGCTCGTAATGCAT+TGG | - | chr7_3:50497599-50497618 | Msa1108020:intron | 45.0% | |
| ! | TGCATTGGTAGAGAAGGTTG+TGG | - | chr7_3:50497614-50497633 | Msa1108020:intron | 45.0% |
| GTGGACAACAAAGAAGATGC+TGG | - | chr7_3:50497633-50497652 | Msa1108020:intron | 45.0% | |
| TTCAAAGGCTACAGAGCCAA+TGG | + | chr7_3:50497690-50497709 | None:intergenic | 45.0% | |
| TGAGTCTATCAGTGATCCTC+CGG | + | chr7_3:50498700-50498719 | None:intergenic | 45.0% | |
| TGAGATTGAAGGAGCTGAGA+AGG | - | chr7_3:50499113-50499132 | Msa1108020:intron | 45.0% | |
| AACAGACTCAGGGTTGTCAA+AGG | + | chr7_3:50499322-50499341 | None:intergenic | 45.0% | |
| AACCCTGAGTCTGTTAAGCT+TGG | - | chr7_3:50499327-50499346 | Msa1108020:intron | 45.0% | |
| ACCCTGAGTCTGTTAAGCTT+GGG | - | chr7_3:50499328-50499347 | Msa1108020:intron | 45.0% | |
| !! | GCATGCACAATAGTTCTGAG+AGG | - | chr7_3:50499426-50499445 | Msa1108020:intron | 45.0% |
| !! | CAATAGTTCTGAGAGGTGCT+AGG | - | chr7_3:50499433-50499452 | Msa1108020:intron | 45.0% |
| GTAAGGAGCAGGGCAATAAA+AGG | + | chr7_3:50499865-50499884 | None:intergenic | 45.0% | |
| CTGCCACAAAAACAGATGTC+AGG | + | chr7_3:50499985-50500004 | None:intergenic | 45.0% | |
| CTCAGACTGTCAATGATAGC+AGG | - | chr7_3:50500061-50500080 | Msa1108020:intron | 45.0% | |
| !! | GCCTGAAATGGTAATGGCAA+AGG | - | chr7_3:50500104-50500123 | Msa1108020:intron | 45.0% |
| !!! | TTGCAATGGAGGCATTTTCC+CGG | - | chr7_3:50500169-50500188 | Msa1108020:CDS | 45.0% |
| GCTGGAATTGATGTCATCTC+TGG | - | chr7_3:50500294-50500313 | Msa1108020:CDS | 45.0% | |
| TCTGATCACTGCATTCACTC+TGG | - | chr7_3:50500389-50500408 | Msa1108020:intron | 45.0% | |
| ! | TTACTCCCTAGTGGATACAG+TGG | - | chr7_3:50500500-50500519 | Msa1108020:CDS | 45.0% |
| CTAACTCCACTGTATCCACT+AGG | + | chr7_3:50500509-50500528 | None:intergenic | 45.0% | |
| ! | CTAGTGGATACAGTGGAGTT+AGG | - | chr7_3:50500507-50500526 | Msa1108020:CDS | 45.0% |
| GGTTGGAGACATGTTTCAAC+GGG | - | chr7_3:50500787-50500806 | Msa1108020:intron | 45.0% | |
| GTTGGAGACATGTTTCAACG+GGG | - | chr7_3:50500788-50500807 | Msa1108020:intron | 45.0% | |
| ATTGCTATCTGCAACAGAGG+CGG | - | chr7_3:50500844-50500863 | Msa1108020:intron | 45.0% | |
| ! | TCATAACTTGTGCTCCAAGG+AGG | - | chr7_3:50500894-50500913 | Msa1108020:intron | 45.0% |
| ATTCTGTCTTCTCTCCTCCT+TGG | + | chr7_3:50500911-50500930 | None:intergenic | 45.0% | |
| TGTCAGAATTTGCCAAGGCA+TGG | + | chr7_3:50500971-50500990 | None:intergenic | 45.0% | |
| AGAAGAAAAAGCTAGCACCC+AGG | + | chr7_3:50501140-50501159 | None:intergenic | 45.0% | |
| TCTAGCTGCCAACTGGAATT+TGG | - | chr7_3:50501206-50501225 | Msa1108020:five_prime_UTR | 45.0% | |
| !!! | TTAAAGTTTTTTTTTTTTTA+AGG | + | chr7_3:50499700-50499719 | None:intergenic | 5.0% |
| ! | TAGAAAGCGCGAGAGAGAGT+TGG | + | chr7_3:50495871-50495890 | None:intergenic | 50.0% |
| ! | GGCCATGGCTATTGCTGATT+TGG | - | chr7_3:50496583-50496602 | Msa1108020:intron | 50.0% |
| ATTCTGCAGTCAACGGGTAG+AGG | - | chr7_3:50496739-50496758 | Msa1108020:intron | 50.0% | |
| TTCTGCAGTCAACGGGTAGA+GGG | - | chr7_3:50496740-50496759 | Msa1108020:intron | 50.0% | |
| CAACGAGGACTTTAGCAGCT+GGG | + | chr7_3:50496825-50496844 | None:intergenic | 50.0% | |
| TCAACGAGGACTTTAGCAGC+TGG | + | chr7_3:50496826-50496845 | None:intergenic | 50.0% | |
| CCCAGCCAATACAACAACAG+AGG | + | chr7_3:50496890-50496909 | None:intergenic | 50.0% | |
| AACTGCAGTATGGACGGAGT+GGG | + | chr7_3:50497471-50497490 | None:intergenic | 50.0% | |
| AAACTGCAGTATGGACGGAG+TGG | + | chr7_3:50497472-50497491 | None:intergenic | 50.0% | |
| GAGTCTATCAGTGATCCTCC+GGG | + | chr7_3:50498699-50498718 | None:intergenic | 50.0% | |
| CACTGCAATGGACACAGACA+AGG | - | chr7_3:50499041-50499060 | Msa1108020:intron | 50.0% | |
| CATAGAGTCGACACGAACAC+GGG | + | chr7_3:50499082-50499101 | None:intergenic | 50.0% | |
| CCATAGAGTCGACACGAACA+CGG | + | chr7_3:50499083-50499102 | None:intergenic | 50.0% | |
| CATCAGCAAAGAGCTCCTCT+GGG | + | chr7_3:50499218-50499237 | None:intergenic | 50.0% | |
| GCCCAAGCTTAACAGACTCA+GGG | + | chr7_3:50499332-50499351 | None:intergenic | 50.0% | |
| TGCCCAAGCTTAACAGACTC+AGG | + | chr7_3:50499333-50499352 | None:intergenic | 50.0% | |
| TCTCAGCCTCATCAAGGACA+TGG | + | chr7_3:50500011-50500030 | None:intergenic | 50.0% | |
| ATGTCCTTGATGAGGCTGAG+AGG | - | chr7_3:50500010-50500029 | Msa1108020:intron | 50.0% | |
| ATGACCTCTCAGCCTCATCA+AGG | + | chr7_3:50500017-50500036 | None:intergenic | 50.0% | |
| !! | GATAGCAGGGTGTTACTTGG+AGG | - | chr7_3:50500075-50500094 | Msa1108020:intron | 50.0% |
| !! | GCATTGGCTAGAAAGACTCC+AGG | - | chr7_3:50500135-50500154 | Msa1108020:intron | 50.0% |
| !!! | TGCAATGGAGGCATTTTCCC+GGG | - | chr7_3:50500170-50500189 | Msa1108020:CDS | 50.0% |
| ! | AAGGAAGCATGCTGAGCTAG+CGG | + | chr7_3:50500718-50500737 | None:intergenic | 50.0% |
| CATGGCGAGCATCTGAAAGT+TGG | + | chr7_3:50500953-50500972 | None:intergenic | 50.0% | |
| AGCTAGCACCCAGGTGAAAA+AGG | + | chr7_3:50501131-50501150 | None:intergenic | 50.0% | |
| GTATCAGTCTAGCTGCCAAC+TGG | - | chr7_3:50501199-50501218 | Msa1108020:five_prime_UTR | 50.0% | |
| ! | GTCGTCTTTTGTTGGGGCCA+TGG | - | chr7_3:50496568-50496587 | Msa1108020:intron | 55.0% |
| !! | CCGTGTTCGTGTCGACTCTA+TGG | - | chr7_3:50499080-50499099 | Msa1108020:intron | 55.0% |
| GCATCAGCAAAGAGCTCCTC+TGG | + | chr7_3:50499219-50499238 | None:intergenic | 55.0% | |
| GAGGAGCTCTTTGCTGATGC+AGG | - | chr7_3:50499219-50499238 | Msa1108020:CDS | 55.0% | |
| ! | TGGTATTGAGCGTCTGGCTC+TGG | - | chr7_3:50499272-50499291 | Msa1108020:CDS | 55.0% |
| !! | TTCTGGTGTTGCAATGGGGC+AGG | - | chr7_3:50499404-50499423 | Msa1108020:intron | 55.0% |
| CAGCCACCATGTCCTTGATG+AGG | - | chr7_3:50500002-50500021 | Msa1108020:intron | 55.0% | |
| CAGCCTCATCAAGGACATGG+TGG | + | chr7_3:50500008-50500027 | None:intergenic | 55.0% | |
| !! | AGCAGGGTGTTACTTGGAGG+CGG | - | chr7_3:50500078-50500097 | Msa1108020:intron | 55.0% |
| CGGGTGGCCTGAAATGGTAA+TGG | - | chr7_3:50500098-50500117 | Msa1108020:intron | 55.0% | |
| !! | TTGGGATAGCCAAGAGTGCC+CGG | + | chr7_3:50500191-50500210 | None:intergenic | 55.0% |
| CAGCAGTACATCCCTCGTTC+TGG | + | chr7_3:50500278-50500297 | None:intergenic | 55.0% | |
| CAGAACGAGGGATGTACTGC+TGG | - | chr7_3:50500276-50500295 | Msa1108020:CDS | 55.0% | |
| TTCAGATGCTCGCCATGCCT+TGG | - | chr7_3:50500956-50500975 | Msa1108020:intron | 55.0% | |
| ! | CGAGAGAGAGTTGGCTGGCT+AGG | + | chr7_3:50495862-50495881 | None:intergenic | 60.0% |
| AAGCGCGAGAGAGAGTTGGC+TGG | + | chr7_3:50495867-50495886 | None:intergenic | 60.0% | |
| GAAAGGAGAGCGGGCGAGAA+TGG | - | chr7_3:50496290-50496309 | Msa1108020:CDS | 60.0% | |
| !! | GGCTGGGGAGCTTTTAAGGG+AGG | - | chr7_3:50496903-50496922 | Msa1108020:CDS | 60.0% |
| GAGCACACTCAGCCGCCATT+CGG | + | chr7_3:50497590-50497609 | None:intergenic | 60.0% | |
| !! | GAGCGTCTGGCTCTGGTAAC+TGG | - | chr7_3:50499279-50499298 | Msa1108020:CDS | 60.0% |
| !! | CGTCTGGCTCTGGTAACTGG+TGG | - | chr7_3:50499282-50499301 | Msa1108020:CDS | 60.0% |
| !! | GCAGGGTGTTACTTGGAGGC+GGG | - | chr7_3:50500079-50500098 | Msa1108020:intron | 60.0% |
| ! | GGCATTTTCCCGGGCACTCT+TGG | - | chr7_3:50500179-50500198 | Msa1108020:CDS | 60.0% |
| !! | TGGGATAGCCAAGAGTGCCC+GGG | + | chr7_3:50500190-50500209 | None:intergenic | 60.0% |
| CCTCGTTCTGGTGCTCAGCA+CGG | + | chr7_3:50500266-50500285 | None:intergenic | 60.0% | |
| CGTGCTGAGCACCAGAACGA+GGG | - | chr7_3:50500264-50500283 | Msa1108020:CDS | 60.0% | |
| !! | GGGTGTTACTTGGAGGCGGG+TGG | - | chr7_3:50500082-50500101 | Msa1108020:intron | 65.0% |
| TGGAGGCGGGTGGCCTGAAA+TGG | - | chr7_3:50500092-50500111 | Msa1108020:intron | 65.0% | |
| CCGTGCTGAGCACCAGAACG+AGG | - | chr7_3:50500263-50500282 | Msa1108020:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 50495782 | 50501334 | 50495782 | ID=Msa1108020;Name=Msa1108020 |
| chr7_3 | mRNA | 50495782 | 50501334 | 50495782 | ID=Msa1108020-mRNA-1;Parent=Msa1108020;Name=Msa1108020-mRNA-1;_AED=0.33;_eAED=0.33;_QI=167|0.91|0.92|1|0.75|0.61|13|345|522 |
| chr7_3 | exon | 50495782 | 50495949 | 50495782 | ID=Msa1108020-mRNA-1:exon:10373;Parent=Msa1108020-mRNA-1 |
| chr7_3 | exon | 50495979 | 50496148 | 50495979 | ID=Msa1108020-mRNA-1:exon:10372;Parent=Msa1108020-mRNA-1 |
| chr7_3 | exon | 50496175 | 50496328 | 50496175 | ID=Msa1108020-mRNA-1:exon:10371;Parent=Msa1108020-mRNA-1 |
| chr7_3 | exon | 50496796 | 50497111 | 50496796 | ID=Msa1108020-mRNA-1:exon:10370;Parent=Msa1108020-mRNA-1 |
| chr7_3 | exon | 50497662 | 50498147 | 50497662 | ID=Msa1108020-mRNA-1:exon:10369;Parent=Msa1108020-mRNA-1 |
| chr7_3 | exon | 50498383 | 50498459 | 50498383 | ID=Msa1108020-mRNA-1:exon:10368;Parent=Msa1108020-mRNA-1 |
| chr7_3 | exon | 50499204 | 50499304 | 50499204 | ID=Msa1108020-mRNA-1:exon:10367;Parent=Msa1108020-mRNA-1 |
| chr7_3 | exon | 50499462 | 50499533 | 50499462 | ID=Msa1108020-mRNA-1:exon:10366;Parent=Msa1108020-mRNA-1 |
| chr7_3 | exon | 50500143 | 50500383 | 50500143 | ID=Msa1108020-mRNA-1:exon:10365;Parent=Msa1108020-mRNA-1 |
| chr7_3 | exon | 50500482 | 50500547 | 50500482 | ID=Msa1108020-mRNA-1:exon:10364;Parent=Msa1108020-mRNA-1 |
| chr7_3 | exon | 50500805 | 50500861 | 50500805 | ID=Msa1108020-mRNA-1:exon:10363;Parent=Msa1108020-mRNA-1 |
| chr7_3 | exon | 50500961 | 50500997 | 50500961 | ID=Msa1108020-mRNA-1:exon:10362;Parent=Msa1108020-mRNA-1 |
| chr7_3 | exon | 50501199 | 50501334 | 50501199 | ID=Msa1108020-mRNA-1:exon:10361;Parent=Msa1108020-mRNA-1 |
| chr7_3 | five_prime_UTR | 50501199 | 50501334 | 50501199 | ID=Msa1108020-mRNA-1:five_prime_utr;Parent=Msa1108020-mRNA-1 |
| chr7_3 | five_prime_UTR | 50500967 | 50500997 | 50500967 | ID=Msa1108020-mRNA-1:five_prime_utr;Parent=Msa1108020-mRNA-1 |
| chr7_3 | CDS | 50500961 | 50500966 | 50500961 | ID=Msa1108020-mRNA-1:cds;Parent=Msa1108020-mRNA-1 |
| chr7_3 | CDS | 50500805 | 50500861 | 50500805 | ID=Msa1108020-mRNA-1:cds;Parent=Msa1108020-mRNA-1 |
| chr7_3 | CDS | 50500482 | 50500547 | 50500482 | ID=Msa1108020-mRNA-1:cds;Parent=Msa1108020-mRNA-1 |
| chr7_3 | CDS | 50500143 | 50500383 | 50500143 | ID=Msa1108020-mRNA-1:cds;Parent=Msa1108020-mRNA-1 |
| chr7_3 | CDS | 50499462 | 50499533 | 50499462 | ID=Msa1108020-mRNA-1:cds;Parent=Msa1108020-mRNA-1 |
| chr7_3 | CDS | 50499204 | 50499304 | 50499204 | ID=Msa1108020-mRNA-1:cds;Parent=Msa1108020-mRNA-1 |
| chr7_3 | CDS | 50498383 | 50498459 | 50498383 | ID=Msa1108020-mRNA-1:cds;Parent=Msa1108020-mRNA-1 |
| chr7_3 | CDS | 50497662 | 50498147 | 50497662 | ID=Msa1108020-mRNA-1:cds;Parent=Msa1108020-mRNA-1 |
| chr7_3 | CDS | 50496796 | 50497111 | 50496796 | ID=Msa1108020-mRNA-1:cds;Parent=Msa1108020-mRNA-1 |
| chr7_3 | CDS | 50496182 | 50496328 | 50496182 | ID=Msa1108020-mRNA-1:cds;Parent=Msa1108020-mRNA-1 |
| chr7_3 | three_prime_UTR | 50496175 | 50496181 | 50496175 | ID=Msa1108020-mRNA-1:three_prime_utr;Parent=Msa1108020-mRNA-1 |
| chr7_3 | three_prime_UTR | 50495979 | 50496148 | 50495979 | ID=Msa1108020-mRNA-1:three_prime_utr;Parent=Msa1108020-mRNA-1 |
| chr7_3 | three_prime_UTR | 50495782 | 50495949 | 50495782 | ID=Msa1108020-mRNA-1:three_prime_utr;Parent=Msa1108020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
