Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216090 | KEH32189.1 | 87.179 | 546 | 49 | 9 | 1 | 544 | 1 | 527 | 2.37e-140 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216090 | sp|F4JZL7|HIP33_ARATH | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.23e-41 | 161 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000560 | Msa1216090 | 0.804255 | 2.358414e-49 | -8.615850e-47 |
| Msa0014770 | Msa1216090 | 0.832055 | 1.176022e-55 | -8.615850e-47 |
| Msa0025160 | Msa1216090 | 0.828810 | 7.307440e-55 | -8.615850e-47 |
| Msa0032180 | Msa1216090 | 0.817191 | 3.747335e-52 | -8.615850e-47 |
| Msa0032460 | Msa1216090 | 0.855821 | 4.877594e-62 | -8.615850e-47 |
| Msa0035340 | Msa1216090 | 0.809103 | 2.232724e-50 | -8.615850e-47 |
| Msa0035380 | Msa1216090 | 0.801289 | 9.659351e-49 | -8.615850e-47 |
| Msa0050660 | Msa1216090 | 0.800287 | 1.546937e-48 | -8.615850e-47 |
| Msa0050700 | Msa1216090 | 0.801019 | 1.097115e-48 | -8.615850e-47 |
| Msa0050790 | Msa1216090 | 0.801263 | 9.777510e-49 | -8.615850e-47 |
| Msa0072520 | Msa1216090 | 0.821039 | 4.990836e-53 | -8.615850e-47 |
| Msa0080610 | Msa1216090 | 0.804233 | 2.383606e-49 | -8.615850e-47 |
| Msa0087890 | Msa1216090 | 0.820468 | 6.749516e-53 | -8.615850e-47 |
| Msa0108630 | Msa1216090 | 0.802588 | 5.225452e-49 | -8.615850e-47 |
| Msa0606100 | Msa1216090 | 0.800302 | 1.536406e-48 | -8.615850e-47 |
| Msa0625340 | Msa1216090 | 0.809369 | 1.958038e-50 | -8.615850e-47 |
| Msa0652770 | Msa1216090 | 0.803181 | 3.941136e-49 | -8.615850e-47 |
| Msa0687090 | Msa1216090 | 0.823116 | 1.646660e-53 | -8.615850e-47 |
| Msa0698730 | Msa1216090 | 0.813677 | 2.268008e-51 | -8.615850e-47 |
| Msa0700460 | Msa1216090 | 0.855579 | 5.739403e-62 | -8.615850e-47 |
| Msa0715160 | Msa1216090 | 0.812352 | 4.426275e-51 | -8.615850e-47 |
| Msa0752780 | Msa1216090 | 0.844052 | 9.600479e-59 | -8.615850e-47 |
| Msa0756490 | Msa1216090 | 0.812239 | 4.685751e-51 | -8.615850e-47 |
| Msa0798080 | Msa1216090 | 0.834508 | 2.878046e-56 | -8.615850e-47 |
| Msa0811690 | Msa1216090 | 0.814132 | 1.800472e-51 | -8.615850e-47 |
| Msa0836330 | Msa1216090 | 0.828874 | 7.053166e-55 | -8.615850e-47 |
| Msa0120790 | Msa1216090 | 0.809231 | 2.096314e-50 | -8.615850e-47 |
| Msa0126210 | Msa1216090 | 0.804434 | 2.164252e-49 | -8.615850e-47 |
| Msa0154620 | Msa1216090 | 0.825342 | 4.938208e-54 | -8.615850e-47 |
| Msa0161930 | Msa1216090 | 0.800027 | 1.747285e-48 | -8.615850e-47 |
| Msa0173290 | Msa1216090 | 0.851888 | 6.615959e-61 | -8.615850e-47 |
| Msa0176060 | Msa1216090 | 0.800109 | 1.681483e-48 | -8.615850e-47 |
| Msa0185960 | Msa1216090 | 0.852457 | 4.559717e-61 | -8.615850e-47 |
| Msa0213610 | Msa1216090 | 0.821773 | 3.379029e-53 | -8.615850e-47 |
| Msa0217460 | Msa1216090 | 0.820872 | 5.451276e-53 | -8.615850e-47 |
| Msa0230800 | Msa1216090 | 0.800324 | 1.520033e-48 | -8.615850e-47 |
| Msa0380670 | Msa1216090 | 0.805644 | 1.208380e-49 | -8.615850e-47 |
| Msa0415600 | Msa1216090 | 0.808112 | 3.635198e-50 | -8.615850e-47 |
| Msa0422050 | Msa1216090 | 0.818251 | 2.161279e-52 | -8.615850e-47 |
| Msa0426530 | Msa1216090 | 0.810983 | 8.787106e-51 | -8.615850e-47 |
| Msa0431200 | Msa1216090 | 0.800460 | 1.426495e-48 | -8.615850e-47 |
| Msa0468700 | Msa1216090 | 0.829482 | 5.023407e-55 | -8.615850e-47 |
| Msa0481140 | Msa1216090 | 0.822619 | 2.149661e-53 | -8.615850e-47 |
| Msa1003740 | Msa1216090 | 0.852201 | 5.391151e-61 | -8.615850e-47 |
| Msa1003800 | Msa1216090 | 0.865126 | 7.403214e-65 | -8.615850e-47 |
| Msa1003930 | Msa1216090 | 0.851284 | 9.807997e-61 | -8.615850e-47 |
| Msa1021590 | Msa1216090 | 0.815808 | 7.647177e-52 | -8.615850e-47 |
| Msa1034600 | Msa1216090 | 0.843914 | 1.045114e-58 | -8.615850e-47 |
| Msa1042160 | Msa1216090 | 0.859810 | 3.197026e-63 | -8.615850e-47 |
| Msa1042190 | Msa1216090 | 0.859298 | 4.555568e-63 | -8.615850e-47 |
| Msa1044680 | Msa1216090 | 0.802479 | 5.501740e-49 | -8.615850e-47 |
| Msa1074370 | Msa1216090 | 0.837778 | 4.252797e-57 | -8.615850e-47 |
| Msa1077990 | Msa1216090 | 0.825400 | 4.786072e-54 | -8.615850e-47 |
| Msa1078880 | Msa1216090 | 0.809063 | 2.276848e-50 | -8.615850e-47 |
| Msa1078970 | Msa1216090 | 0.800814 | 1.207796e-48 | -8.615850e-47 |
| Msa1080000 | Msa1216090 | 0.848208 | 7.094021e-60 | -8.615850e-47 |
| Msa1081690 | Msa1216090 | 0.810893 | 9.191821e-51 | -8.615850e-47 |
| Msa1104110 | Msa1216090 | 0.803480 | 3.416170e-49 | -8.615850e-47 |
| Msa1105640 | Msa1216090 | 0.815869 | 7.409037e-52 | -8.615850e-47 |
| Msa0257300 | Msa1216090 | 0.805434 | 1.337584e-49 | -8.615850e-47 |
| Msa0275070 | Msa1216090 | 0.800036 | 1.740076e-48 | -8.615850e-47 |
| Msa0293040 | Msa1216090 | 0.828734 | 7.626472e-55 | -8.615850e-47 |
| Msa0296600 | Msa1216090 | 0.811076 | 8.387897e-51 | -8.615850e-47 |
| Msa0315980 | Msa1216090 | 0.801856 | 7.391873e-49 | -8.615850e-47 |
| Msa0346740 | Msa1216090 | 0.804337 | 2.267725e-49 | -8.615850e-47 |
| Msa1108020 | Msa1216090 | 0.804935 | 1.701100e-49 | -8.615850e-47 |
| Msa1132530 | Msa1216090 | 0.827231 | 1.753601e-54 | -8.615850e-47 |
| Msa1148960 | Msa1216090 | 0.805940 | 1.047104e-49 | -8.615850e-47 |
| Msa1161970 | Msa1216090 | 0.835507 | 1.611779e-56 | -8.615850e-47 |
| Msa1166190 | Msa1216090 | 0.813622 | 2.331265e-51 | -8.615850e-47 |
| Msa1166290 | Msa1216090 | 0.808560 | 2.917478e-50 | -8.615850e-47 |
| Msa1167470 | Msa1216090 | 0.868790 | 5.026552e-66 | -8.615850e-47 |
| Msa1169190 | Msa1216090 | 0.813188 | 2.904482e-51 | -8.615850e-47 |
| Msa1196450 | Msa1216090 | 0.805428 | 1.341411e-49 | -8.615850e-47 |
| Msa1216090 | Msa1216110 | 0.909180 | 7.571212e-82 | -8.615850e-47 |
| Msa1216090 | Msa1216340 | 0.924324 | 8.200831e-90 | -8.615850e-47 |
| Msa1216090 | Msa1216360 | 0.818635 | 1.768663e-52 | -8.615850e-47 |
| Msa1216090 | Msa1217910 | 0.824472 | 7.925541e-54 | -8.615850e-47 |
| Msa1216090 | Msa1219930 | 0.840485 | 8.454869e-58 | -8.615850e-47 |
| Msa1216090 | Msa1240770 | 0.827687 | 1.363180e-54 | -8.615850e-47 |
| Msa1216090 | Msa1263010 | 0.803871 | 2.834722e-49 | -8.615850e-47 |
| Msa1216090 | Msa1279150 | 0.802467 | 5.533499e-49 | -8.615850e-47 |
| Msa1216090 | Msa1282260 | 0.811318 | 7.433763e-51 | -8.615850e-47 |
| Msa1216090 | Msa1290730 | 0.812501 | 4.106605e-51 | -8.615850e-47 |
| Msa1216090 | Msa1290770 | 0.815097 | 1.100487e-51 | -8.615850e-47 |
| Msa1216090 | Msa1301980 | 0.893407 | 6.467985e-75 | -8.615850e-47 |
| Msa1216090 | Msa1302000 | 0.864555 | 1.117488e-64 | -8.615850e-47 |
| Msa1216090 | Msa1303880 | 0.854439 | 1.229776e-61 | -8.615850e-47 |
| Msa1216090 | Msa1306570 | 0.825836 | 3.772092e-54 | -8.615850e-47 |
| Msa1216090 | Msa1315130 | 0.829466 | 5.068882e-55 | -8.615850e-47 |
| Msa1216090 | Msa1315160 | 0.831537 | 1.577833e-55 | -8.615850e-47 |
| Msa1216090 | Msa1328300 | 0.804423 | 2.175702e-49 | -8.615850e-47 |
| Msa1216090 | Msa1333500 | 0.840740 | 7.247084e-58 | -8.615850e-47 |
| Msa1216090 | Msa1349690 | 0.849262 | 3.620686e-60 | -8.615850e-47 |
| Msa1216090 | Msa1358290 | 0.840641 | 7.695366e-58 | -8.615850e-47 |
| Msa1216090 | Msa1375350 | 0.832410 | 9.604318e-56 | -8.615850e-47 |
| Msa1216090 | Msa1392740 | 0.840440 | 8.682343e-58 | -8.615850e-47 |
| Msa1216090 | Msa1393780 | 0.836879 | 7.225159e-57 | -8.615850e-47 |
| Msa1216090 | Msa1408160 | 0.839250 | 1.772678e-57 | -8.615850e-47 |
| Msa1216090 | Msa1410160 | 0.816862 | 4.443057e-52 | -8.615850e-47 |
| Msa1216090 | Msa1448960 | 0.822603 | 2.168880e-53 | -8.615850e-47 |
| Msa1216090 | Msa1462490 | 0.845996 | 2.865945e-59 | -8.615850e-47 |
| Msa0483910 | Msa1216090 | 0.871259 | 7.829166e-67 | -8.615850e-47 |
| Msa0484570 | Msa1216090 | 0.829368 | 5.351601e-55 | -8.615850e-47 |
| Msa0514580 | Msa1216090 | 0.822837 | 1.912871e-53 | -8.615850e-47 |
| Msa0517250 | Msa1216090 | 0.846299 | 2.369316e-59 | -8.615850e-47 |
| Msa0520260 | Msa1216090 | 0.812898 | 3.362320e-51 | -8.615850e-47 |
| Msa0529030 | Msa1216090 | 0.802443 | 5.596925e-49 | -8.615850e-47 |
| Msa0537990 | Msa1216090 | 0.808017 | 3.807550e-50 | -8.615850e-47 |
| Msa0563940 | Msa1216090 | 0.859160 | 5.010768e-63 | -8.615850e-47 |
| Msa0580940 | Msa1216090 | 0.825770 | 3.910043e-54 | -8.615850e-47 |
| Msa0585340 | Msa1216090 | 0.818103 | 2.334496e-52 | -8.615850e-47 |
| Msa0587620 | Msa1216090 | 0.814110 | 1.820339e-51 | -8.615850e-47 |
| Msa0909760 | Msa1216090 | 0.810171 | 1.316169e-50 | -8.615850e-47 |
| Msa0966710 | Msa1216090 | 0.805878 | 1.078884e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216090 | MtrunA17_Chr4g0065651 | 76.311 | 553 | 81 | 10 | 1 | 544 | 1 | 512 | 8.96e-133 | 396 |
| Msa1216090 | MtrunA17_Chr0c22g0493881 | 77.475 | 404 | 51 | 7 | 1 | 402 | 1 | 366 | 2.31e-88 | 276 |
| Msa1216090 | MtrunA17_Chr4g0065621 | 87.342 | 316 | 25 | 5 | 1 | 315 | 1 | 302 | 3.60e-88 | 276 |
| Msa1216090 | MtrunA17_Chr2g0287751 | 65.000 | 260 | 64 | 10 | 1 | 256 | 1 | 237 | 2.90e-55 | 193 |
| Msa1216090 | MtrunA17_Chr4g0065611 | 92.366 | 131 | 9 | 1 | 415 | 544 | 12 | 142 | 1.39e-40 | 143 |
| Msa1216090 | MtrunA17_Chr0c22g0493871 | 92.308 | 130 | 9 | 1 | 416 | 544 | 1 | 130 | 3.94e-40 | 142 |
| Msa1216090 | MtrunA17_Chr1g0191671 | 58.273 | 139 | 51 | 3 | 1 | 135 | 1 | 136 | 1.25e-32 | 132 |
| Msa1216090 | MtrunA17_Chr2g0287741 | 57.949 | 195 | 55 | 7 | 10 | 201 | 15 | 185 | 8.77e-30 | 123 |
| Msa1216090 | MtrunA17_Chr1g0208301 | 70.513 | 78 | 20 | 1 | 1 | 75 | 1 | 78 | 1.14e-29 | 120 |
| Msa1216090 | MtrunA17_Chr4g0067291 | 50.000 | 114 | 41 | 3 | 7 | 120 | 71 | 168 | 2.24e-24 | 104 |
| Msa1216090 | MtrunA17_Chr7g0269081 | 67.143 | 70 | 23 | 0 | 5 | 74 | 17 | 86 | 3.09e-24 | 103 |
| Msa1216090 | MtrunA17_Chr3g0111541 | 53.521 | 71 | 33 | 0 | 3 | 73 | 5 | 75 | 5.26e-19 | 85.9 |
| Msa1216090 | MtrunA17_Chr1g0192131 | 57.333 | 75 | 31 | 1 | 4 | 77 | 9 | 83 | 7.11e-19 | 89.0 |
| Msa1216090 | MtrunA17_Chr7g0272571 | 53.521 | 71 | 33 | 0 | 9 | 79 | 32 | 102 | 1.42e-18 | 87.4 |
| Msa1216090 | MtrunA17_Chr2g0296001 | 60.000 | 70 | 28 | 0 | 5 | 74 | 68 | 137 | 4.47e-17 | 82.8 |
| Msa1216090 | MtrunA17_Chr1g0198341 | 39.189 | 74 | 45 | 0 | 10 | 83 | 4 | 77 | 1.60e-13 | 65.9 |
| Msa1216090 | MtrunA17_Chr8g0382721 | 52.459 | 61 | 29 | 0 | 14 | 74 | 33 | 93 | 6.54e-13 | 66.6 |
| Msa1216090 | MtrunA17_Chr2g0285561 | 46.575 | 73 | 38 | 1 | 8 | 79 | 6 | 78 | 1.86e-12 | 68.2 |
| Msa1216090 | MtrunA17_Chr1g0160201 | 45.902 | 61 | 33 | 0 | 14 | 74 | 29 | 89 | 1.89e-12 | 65.1 |
| Msa1216090 | MtrunA17_Chr3g0124411 | 47.761 | 67 | 35 | 0 | 8 | 74 | 28 | 94 | 2.42e-12 | 65.1 |
| Msa1216090 | MtrunA17_Chr2g0325601 | 42.254 | 71 | 41 | 0 | 14 | 84 | 6 | 76 | 3.57e-12 | 64.3 |
| Msa1216090 | MtrunA17_Chr1g0189221 | 37.975 | 79 | 49 | 0 | 1 | 79 | 44 | 122 | 3.95e-12 | 65.1 |
| Msa1216090 | MtrunA17_Chr7g0251491 | 33.654 | 104 | 62 | 3 | 2 | 98 | 40 | 143 | 7.66e-12 | 63.9 |
| Msa1216090 | MtrunA17_Chr4g0028461 | 48.276 | 87 | 43 | 2 | 12 | 96 | 68 | 154 | 9.74e-12 | 66.2 |
| Msa1216090 | MtrunA17_Chr7g0218981 | 37.037 | 81 | 51 | 0 | 13 | 93 | 7 | 87 | 1.23e-11 | 62.0 |
| Msa1216090 | MtrunA17_Chr5g0407821 | 37.179 | 78 | 49 | 0 | 3 | 80 | 16 | 93 | 1.76e-11 | 62.4 |
| Msa1216090 | MtrunA17_Chr5g0404641 | 41.176 | 68 | 40 | 0 | 9 | 76 | 2 | 69 | 4.39e-11 | 61.6 |
| Msa1216090 | MtrunA17_Chr4g0050571 | 45.455 | 66 | 35 | 1 | 10 | 75 | 101 | 165 | 9.88e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216090 | AT5G19090.2 | 78.000 | 100 | 22 | 0 | 1 | 100 | 1 | 100 | 1.85e-43 | 161 |
| Msa1216090 | AT5G19090.3 | 78.000 | 100 | 22 | 0 | 1 | 100 | 1 | 100 | 1.85e-43 | 161 |
| Msa1216090 | AT5G19090.5 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.25e-42 | 161 |
| Msa1216090 | AT5G19090.4 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.25e-42 | 161 |
| Msa1216090 | AT5G19090.1 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.25e-42 | 161 |
| Msa1216090 | AT5G27690.1 | 52.475 | 101 | 43 | 1 | 5 | 105 | 25 | 120 | 3.02e-26 | 110 |
| Msa1216090 | AT3G05220.1 | 63.514 | 74 | 27 | 0 | 1 | 74 | 1 | 74 | 3.13e-26 | 113 |
| Msa1216090 | AT1G23000.1 | 61.628 | 86 | 29 | 2 | 1 | 83 | 1 | 85 | 1.30e-25 | 108 |
| Msa1216090 | AT1G23000.2 | 61.628 | 86 | 29 | 2 | 1 | 83 | 61 | 145 | 3.87e-25 | 108 |
| Msa1216090 | AT5G37860.1 | 50.000 | 76 | 38 | 0 | 1 | 76 | 1 | 76 | 2.35e-19 | 88.6 |
| Msa1216090 | AT1G56210.1 | 54.667 | 75 | 33 | 1 | 10 | 83 | 40 | 114 | 1.40e-18 | 88.2 |
| Msa1216090 | AT1G06330.1 | 46.875 | 64 | 34 | 0 | 14 | 77 | 6 | 69 | 2.81e-13 | 68.2 |
| Msa1216090 | AT4G10465.1 | 36.957 | 92 | 58 | 0 | 1 | 92 | 42 | 133 | 3.80e-12 | 65.5 |
| Msa1216090 | AT1G66240.1 | 40.000 | 65 | 39 | 0 | 10 | 74 | 33 | 97 | 5.22e-12 | 63.2 |
| Msa1216090 | AT3G56891.1 | 43.750 | 64 | 36 | 0 | 14 | 77 | 20 | 83 | 1.67e-11 | 63.2 |
| Msa1216090 | AT3G02960.1 | 41.892 | 74 | 42 | 1 | 3 | 75 | 119 | 192 | 2.42e-11 | 64.7 |
| Msa1216090 | AT4G23882.1 | 43.678 | 87 | 38 | 3 | 9 | 84 | 77 | 163 | 4.14e-11 | 64.3 |
| Msa1216090 | AT3G56240.3 | 41.791 | 67 | 39 | 0 | 10 | 76 | 3 | 69 | 4.81e-11 | 60.8 |
| Msa1216090 | AT3G56240.1 | 41.791 | 67 | 39 | 0 | 10 | 76 | 3 | 69 | 4.81e-11 | 60.8 |
| Msa1216090 | AT1G71050.1 | 39.394 | 66 | 40 | 0 | 9 | 74 | 27 | 92 | 7.48e-11 | 61.2 |
Find 200 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGGAAGGTCACAGTTTC+AGG | 0.145406 | 8_1:-77660268 | Msa1216090:CDS |
| CAAGATCTAGCTCAATTTAA+AGG | 0.182916 | 8_1:-77659914 | Msa1216090:CDS |
| TAGGATTCTGATTCGGGTTC+TGG | 0.245506 | 8_1:+77659861 | None:intergenic |
| ACTTGTAATAAATAAAGATT+TGG | 0.251490 | 8_1:+77660726 | None:intergenic |
| GGATTACCCGACATCATTTC+CGG | 0.260282 | 8_1:+77659032 | None:intergenic |
| AAGAAGCAAGTTTGAGAGTT+AGG | 0.269593 | 8_1:+77660896 | None:intergenic |
| TATTGTTTCCACCACCCTTC+TGG | 0.290425 | 8_1:+77660050 | None:intergenic |
| CATCTTTAGGATTCTGATTC+GGG | 0.295568 | 8_1:+77659855 | None:intergenic |
| ATCAAGAAGCTTGCAAAATC+AGG | 0.297726 | 8_1:-77660223 | Msa1216090:CDS |
| TTAACACCTTTAGCATCTTT+AGG | 0.299936 | 8_1:+77659842 | None:intergenic |
| AGCTTCTTGATGAGAACATT+TGG | 0.309355 | 8_1:+77660235 | None:intergenic |
| GGAGAGAGAATGAGAAATAA+AGG | 0.309923 | 8_1:+77661106 | None:intergenic |
| TTGTATTTGTTGACCACCTT+TGG | 0.313268 | 8_1:+77660021 | None:intergenic |
| GTTACAAACTTTATTCCTAT+TGG | 0.314373 | 8_1:-77660705 | Msa1216090:five_prime_UTR |
| GCAACAGCAACAACAGTTAA+TGG | 0.314992 | 8_1:-77658979 | Msa1216090:CDS |
| CCATTCCCCATAGGCATAGA+AGG | 0.318053 | 8_1:+77659680 | None:intergenic |
| CTTCTTTACTCATGACCAAT+AGG | 0.330043 | 8_1:+77660690 | None:intergenic |
| TAGTAGTCATTGAGAGAGAA+TGG | 0.336882 | 8_1:+77660940 | None:intergenic |
| GCATCTTTAGGATTCTGATT+CGG | 0.340947 | 8_1:+77659854 | None:intergenic |
| AAAAGAGAGGGAGGTGTATA+CGG | 0.342045 | 8_1:+77661153 | None:intergenic |
| TCTGATTCGGGTTCTGGCCC+GGG | 0.343572 | 8_1:+77659867 | None:intergenic |
| ACTGATTAACAACGTTGTTC+TGG | 0.344905 | 8_1:+77660146 | None:intergenic |
| GGTGATTATAGATCTGAAAA+TGG | 0.348415 | 8_1:+77660764 | None:intergenic |
| AAAACAAATGTTATTGAGAA+TGG | 0.353964 | 8_1:-77658466 | Msa1216090:three_prime_UTR |
| TTCTGATTCGGGTTCTGGCC+CGG | 0.355308 | 8_1:+77659866 | None:intergenic |
| CCACCATTGCAGCACGTTGT+TGG | 0.355462 | 8_1:+77658940 | None:intergenic |
| ATGATGGGCGGCGGCGGAGG+TGG | 0.357592 | 8_1:-77659197 | Msa1216090:CDS |
| AATGGCGGTGGTGGCGGAAA+CGG | 0.358961 | 8_1:-77659593 | Msa1216090:CDS |
| GTGGCCACCGGCGTCATTCT+CGG | 0.359701 | 8_1:-77661029 | Msa1216090:five_prime_UTR |
| TTCTATAAACTACTCCTCTA+TGG | 0.368659 | 8_1:+77658600 | None:intergenic |
| CTAAAATCATCCTCATCTTC+AGG | 0.371343 | 8_1:+77659809 | None:intergenic |
| TGAAATGAAATGAGAATAGA+AGG | 0.374304 | 8_1:+77660832 | None:intergenic |
| TTCAAATTCATGGCATGAAT+GGG | 0.375304 | 8_1:-77659466 | Msa1216090:CDS |
| AAGAAAGGTGGCGGCGGTGG+TGG | 0.378437 | 8_1:-77659425 | Msa1216090:CDS |
| ATGGCGGTGGTGGCGGAAAC+GGG | 0.382069 | 8_1:-77659592 | Msa1216090:CDS |
| AAGGAAAAGAGAGAAATAAA+TGG | 0.382972 | 8_1:+77660851 | None:intergenic |
| TAAGGATCTGGAGGAGGATA+AGG | 0.389057 | 8_1:+77658840 | None:intergenic |
| AGAGTTAGGAAGAGAGAGAA+TGG | 0.398540 | 8_1:+77660910 | None:intergenic |
| CATCAAACAAACAATGTTCA+TGG | 0.400654 | 8_1:-77658766 | Msa1216090:three_prime_UTR |
| AAAATGATGGGCGGCGGCGG+AGG | 0.402766 | 8_1:-77659200 | Msa1216090:CDS |
| GGTAACATTTCTGCTGTTCA+AGG | 0.405632 | 8_1:-77659101 | Msa1216090:CDS |
| CAGAAATGTTACCACCCATT+TGG | 0.407941 | 8_1:+77659111 | None:intergenic |
| TTCTCTCTCACTAACACACT+TGG | 0.409730 | 8_1:-77660990 | Msa1216090:five_prime_UTR |
| GCAATAATCAAAATAACAAT+GGG | 0.412169 | 8_1:-77659295 | Msa1216090:CDS |
| GGAAAGAAAGGTGGCGGCGG+TGG | 0.412415 | 8_1:-77659428 | Msa1216090:CDS |
| TGATGTTGTTGTTGTTGATA+AGG | 0.414303 | 8_1:+77659011 | None:intergenic |
| CAGGGAAACATGCTGAGTTA+TGG | 0.418710 | 8_1:-77660204 | Msa1216090:CDS |
| GCTTCTTGATGAGAACATTT+GGG | 0.423822 | 8_1:+77660236 | None:intergenic |
| CCTGTGCCAGTTCAAATTCA+TGG | 0.427491 | 8_1:-77659476 | Msa1216090:CDS |
| TGTATTTGTTGACCACCTTT+GGG | 0.427960 | 8_1:+77660022 | None:intergenic |
| AAAATCTTACAGAAAATTGA+TGG | 0.430085 | 8_1:-77660460 | Msa1216090:intron |
| TTTCAAGGTGGTGGTGGTCC+AGG | 0.433093 | 8_1:-77659056 | Msa1216090:CDS |
| CTTGTAATAAATAAAGATTT+GGG | 0.434749 | 8_1:+77660727 | None:intergenic |
| AGTAGTCATTGAGAGAGAAT+GGG | 0.436778 | 8_1:+77660941 | None:intergenic |
| TGATGATGAAATGGTTGGTT+TGG | 0.437574 | 8_1:-77659723 | Msa1216090:CDS |
| GGAAAGAAAGGTGGTGGTGG+TGG | 0.438004 | 8_1:-77659500 | Msa1216090:CDS |
| GATTACCCGACATCATTTCC+GGG | 0.438202 | 8_1:+77659033 | None:intergenic |
| ACGCCGGTGGCCACCGTCGC+CGG | 0.451894 | 8_1:+77661038 | None:intergenic |
| GTTCAAATTCATGGCATGAA+TGG | 0.453332 | 8_1:-77659467 | Msa1216090:CDS |
| TAATACCACTGAGATCTTAC+CGG | 0.456960 | 8_1:-77661057 | Msa1216090:five_prime_UTR |
| AAAGCATGGCTGTAAGGATC+TGG | 0.457940 | 8_1:+77658828 | None:intergenic |
| CCTTCTATGCCTATGGGGAA+TGG | 0.458052 | 8_1:-77659680 | Msa1216090:CDS |
| AAGAAAAGAGCAAACTGAGC+TGG | 0.460096 | 8_1:+77658429 | None:intergenic |
| TGATGAGTTTGATGATGAAA+TGG | 0.461887 | 8_1:-77659732 | Msa1216090:CDS |
| AACAACTTCAACAGATGAAA+GGG | 0.462139 | 8_1:-77659940 | Msa1216090:CDS |
| TTCATGCCATGAGTTTGAAC+CGG | 0.463492 | 8_1:+77659542 | None:intergenic |
| ACAGCTTATGAGTGCTATGA+AGG | 0.465021 | 8_1:-77659627 | Msa1216090:CDS |
| TTCATGCCATGAATTTGAAC+TGG | 0.469656 | 8_1:+77659470 | None:intergenic |
| GCTGTTCAAGGCCTACCGGC+TGG | 0.474751 | 8_1:-77659089 | Msa1216090:CDS |
| CATGGCATGAATGGTGGAAA+TGG | 0.475119 | 8_1:-77659530 | Msa1216090:CDS |
| TTCTGCTGTTCAAGGCCTAC+CGG | 0.475565 | 8_1:-77659093 | Msa1216090:CDS |
| TACGGTTTCTATACGAGTTG+TGG | 0.482679 | 8_1:+77661171 | None:intergenic |
| ATTGACAATGGCAAAGGTGG+TGG | 0.482824 | 8_1:-77660109 | Msa1216090:CDS |
| AGAATGAGAAATAAAGGAAA+GGG | 0.483580 | 8_1:+77661112 | None:intergenic |
| GGCGGAAACGGGCAGAAACC+TGG | 0.484298 | 8_1:-77659581 | Msa1216090:CDS |
| TGGTTCATTCGCATACTCAT+TGG | 0.484892 | 8_1:+77659131 | None:intergenic |
| CACCCTGCTATGAGTGGTGC+AGG | 0.485466 | 8_1:-77659167 | Msa1216090:CDS |
| AAATAAAGGAAAGGGAAGAA+AGG | 0.486470 | 8_1:+77661120 | None:intergenic |
| TCACTGAAAGCATGGCTGTA+AGG | 0.487097 | 8_1:+77658822 | None:intergenic |
| AAGGATCTGGAGGAGGATAA+GGG | 0.490431 | 8_1:+77658841 | None:intergenic |
| AGGTGGTGGTGGTCCAGGCC+CGG | 0.500129 | 8_1:-77659051 | Msa1216090:CDS |
| TTACCACCACTACCAGCAAT+TGG | 0.502799 | 8_1:+77659251 | None:intergenic |
| GGTGGCCTTGCATACATCAT+TGG | 0.504586 | 8_1:+77658894 | None:intergenic |
| TCTGGAGGAGGATAAGGGTA+AGG | 0.506412 | 8_1:+77658846 | None:intergenic |
| AAACAAATGTTATTGAGAAT+GGG | 0.506919 | 8_1:-77658465 | Msa1216090:three_prime_UTR |
| GGTATGTCGATACCAATTGC+TGG | 0.507057 | 8_1:-77659263 | Msa1216090:CDS |
| AGCAATAATCAAAATAACAA+TGG | 0.513280 | 8_1:-77659296 | Msa1216090:CDS |
| TTACCTGCACCACTCATAGC+AGG | 0.515328 | 8_1:+77659164 | None:intergenic |
| AATGGTAATGGAGGAAAGAA+AGG | 0.520568 | 8_1:-77659440 | Msa1216090:CDS |
| CAGAATCCTAAAGATGCTAA+AGG | 0.521196 | 8_1:-77659848 | Msa1216090:CDS |
| AATCAAAACCAGAAGGGTGG+TGG | 0.522342 | 8_1:-77660058 | Msa1216090:CDS |
| GGAGGAAAGAAAGGTGGTGG+TGG | 0.522847 | 8_1:-77659503 | Msa1216090:CDS |
| CCAACAACGTGCTGCAATGG+TGG | 0.523359 | 8_1:-77658940 | Msa1216090:CDS |
| AGAAAAGAGCAAACTGAGCT+GGG | 0.524013 | 8_1:+77658430 | None:intergenic |
| GGTGCTCACATGATGTTGAA+TGG | 0.526053 | 8_1:-77659659 | Msa1216090:CDS |
| CAACAACTTCAACAGATGAA+AGG | 0.526664 | 8_1:-77659941 | Msa1216090:CDS |
| GCTGGCGGAGGATACTTTCA+AGG | 0.526671 | 8_1:-77659071 | Msa1216090:CDS |
| CAAGGCCTACCGGCTGGCGG+AGG | 0.527853 | 8_1:-77659083 | Msa1216090:CDS |
| AACGGGCAGAAACCTGGTGG+TGG | 0.531908 | 8_1:-77659575 | Msa1216090:CDS |
| GTTCAAACTCATGGCATGAA+TGG | 0.532746 | 8_1:-77659539 | Msa1216090:CDS |
| AATGGCAATGGAGGAAAGAA+AGG | 0.535264 | 8_1:-77659512 | Msa1216090:CDS |
| GAGAATGAGAAATAAAGGAA+AGG | 0.536809 | 8_1:+77661111 | None:intergenic |
| CCATGAGTTTGAACCGGCAC+AGG | 0.537218 | 8_1:+77659548 | None:intergenic |
| GAGTATGCGAATGAACCAAA+TGG | 0.538895 | 8_1:-77659126 | Msa1216090:CDS |
| CCATGAATTTGAACTGGCAC+AGG | 0.538960 | 8_1:+77659476 | None:intergenic |
| TTACCGGCGACGGTGGCCAC+CGG | 0.539537 | 8_1:-77661041 | Msa1216090:five_prime_UTR |
| GTGCTCACATGATGTTGAAT+GGG | 0.541270 | 8_1:-77659658 | Msa1216090:CDS |
| GGATACTTTCAAGGTGGTGG+TGG | 0.542661 | 8_1:-77659062 | Msa1216090:CDS |
| CCAGGCCCGGAAATGATGTC+GGG | 0.544393 | 8_1:-77659038 | Msa1216090:CDS |
| TGAAAGTATCCTCCGCCAGC+CGG | 0.545772 | 8_1:+77659074 | None:intergenic |
| GAATCACATGACATTGCAGC+TGG | 0.546046 | 8_1:+77658788 | None:intergenic |
| GGAGGAGGATAAGGGTAAGG+AGG | 0.549476 | 8_1:+77658849 | None:intergenic |
| GGGCAGAAACCTGGTGGTGG+AGG | 0.550293 | 8_1:-77659572 | Msa1216090:CDS |
| TCAAGAAGCTTGCAAAATCA+GGG | 0.551852 | 8_1:-77660222 | Msa1216090:CDS |
| GGAGGATACTTTCAAGGTGG+TGG | 0.554853 | 8_1:-77659065 | Msa1216090:CDS |
| TGGTGGTGGAGGACCTGTGC+CGG | 0.556236 | 8_1:-77659561 | Msa1216090:CDS |
| GGTGGTGGAGAAAACAAGAA+TGG | 0.556447 | 8_1:-77659332 | Msa1216090:CDS |
| GATGCCGCTGAATCAGCACC+CGG | 0.559535 | 8_1:-77659885 | Msa1216090:CDS |
| GTAGTCATTGAGAGAGAATG+GGG | 0.559844 | 8_1:+77660942 | None:intergenic |
| CCTGTGCCGGTTCAAACTCA+TGG | 0.563500 | 8_1:-77659548 | Msa1216090:CDS |
| TATATTGCATAAAATTAGAG+AGG | 0.567583 | 8_1:+77658713 | None:intergenic |
| TGAAGTTGTTGCTGCTGCTG+AGG | 0.567794 | 8_1:+77659980 | None:intergenic |
| ATGTAATTCACAGCAGGAGG+TGG | 0.568435 | 8_1:+77658876 | None:intergenic |
| CATTCCCCATAGGCATAGAA+GGG | 0.572536 | 8_1:+77659681 | None:intergenic |
| AATAATCAGAATCACGGTGG+AGG | 0.574664 | 8_1:-77659398 | Msa1216090:CDS |
| CAAACTCATGGCATGAATGG+TGG | 0.576301 | 8_1:-77659536 | Msa1216090:CDS |
| TTTGTTGACCACCTTTGGGT+TGG | 0.576873 | 8_1:+77660026 | None:intergenic |
| GGGTACATGTAATTCACAGC+AGG | 0.576931 | 8_1:+77658870 | None:intergenic |
| GGCACAGGTCCTCCACCACC+AGG | 0.577295 | 8_1:+77659563 | None:intergenic |
| AATGTTCAAGCTATGAACAA+TGG | 0.581859 | 8_1:-77659230 | Msa1216090:CDS |
| GAGTTTGATGATGAAATGGT+TGG | 0.582338 | 8_1:-77659728 | Msa1216090:CDS |
| TCCAGGCCCGGAAATGATGT+CGG | 0.582559 | 8_1:-77659039 | Msa1216090:CDS |
| TCTCTCTCACTAACACACTT+GGG | 0.583240 | 8_1:-77660989 | Msa1216090:five_prime_UTR |
| GGTCACAGTTTCAGGGAATG+TGG | 0.584262 | 8_1:-77660260 | Msa1216090:CDS |
| GGAGGAAAGAAAGGTGGCGG+CGG | 0.585808 | 8_1:-77659431 | Msa1216090:CDS |
| AGCAGCCAATGATGTATGCA+AGG | 0.586173 | 8_1:-77658899 | Msa1216090:CDS |
| TCGATACCAATTGCTGGTAG+TGG | 0.586867 | 8_1:-77659257 | Msa1216090:CDS |
| ACAAACAATGTTCATGGTGA+TGG | 0.588045 | 8_1:-77658760 | Msa1216090:three_prime_UTR |
| ATGAATGGTGGAAATGGCAA+TGG | 0.589322 | 8_1:-77659524 | Msa1216090:CDS |
| AAGGGAAGGTCACAGTTTCA+GGG | 0.589814 | 8_1:-77660267 | Msa1216090:CDS |
| AAATCAGAATCAAAACCAGA+AGG | 0.592384 | 8_1:-77660065 | Msa1216090:CDS |
| GTTCAAGGCCTACCGGCTGG+CGG | 0.593786 | 8_1:-77659086 | Msa1216090:CDS |
| TGGCCCGGGTGCTGATTCAG+CGG | 0.593907 | 8_1:+77659881 | None:intergenic |
| AGTATCCTCCGCCAGCCGGT+AGG | 0.594256 | 8_1:+77659078 | None:intergenic |
| CATCCTCACCCTGCTATGAG+TGG | 0.595605 | 8_1:-77659173 | Msa1216090:CDS |
| TGGCTGTAAGGATCTGGAGG+AGG | 0.596052 | 8_1:+77658834 | None:intergenic |
| CAACAAATACAACAACTACA+AGG | 0.597690 | 8_1:-77660010 | Msa1216090:CDS |
| ATTTGATGTGCCTGAAGATG+AGG | 0.599659 | 8_1:-77659819 | Msa1216090:CDS |
| TCAAATTCATGGCATGAATG+GGG | 0.600577 | 8_1:-77659465 | Msa1216090:CDS |
| GAACCAACAACGTGCTGCAA+TGG | 0.602574 | 8_1:-77658943 | Msa1216090:CDS |
| GGCAATGGAGGAAAGAAAGG+TGG | 0.603629 | 8_1:-77659509 | Msa1216090:CDS |
| AATCAGAATCAAAACCAGAA+GGG | 0.603694 | 8_1:-77660064 | Msa1216090:CDS |
| AACAATAACCAACCCAAAGG+TGG | 0.605261 | 8_1:-77660034 | Msa1216090:CDS |
| AATGGAGGAAAGAAAGGTGG+TGG | 0.606743 | 8_1:-77659506 | Msa1216090:CDS |
| ATACCAATTGCTGGTAGTGG+TGG | 0.608621 | 8_1:-77659254 | Msa1216090:CDS |
| CAAATTGACAATGGCAAAGG+TGG | 0.610618 | 8_1:-77660112 | Msa1216090:CDS |
| AGTATGCGAATGAACCAAAT+GGG | 0.610690 | 8_1:-77659125 | Msa1216090:CDS |
| TTCATAGCACTCATAAGCTG+TGG | 0.610940 | 8_1:+77659629 | None:intergenic |
| ATGCAAATTGACAATGGCAA+AGG | 0.611165 | 8_1:-77660115 | Msa1216090:CDS |
| GGAAGAAATAATCAGAATCA+CGG | 0.611531 | 8_1:-77659404 | Msa1216090:CDS |
| CAAATTCATGGCATGAATGG+GGG | 0.612639 | 8_1:-77659464 | Msa1216090:CDS |
| CACTGAGATCTTACCGGCGA+CGG | 0.616024 | 8_1:-77661051 | Msa1216090:five_prime_UTR |
| AAAGTGAACATACACTGTGA+TGG | 0.617847 | 8_1:-77660502 | Msa1216090:CDS |
| ATGTGAGCACCATTCCCCAT+AGG | 0.619841 | 8_1:+77659671 | None:intergenic |
| GGGGTTTCTAATTACCATAG+AGG | 0.620908 | 8_1:-77658614 | Msa1216090:three_prime_UTR |
| ACTGAGATAGATGCAGAACA+AGG | 0.622005 | 8_1:-77660286 | Msa1216090:CDS |
| AAGAACATGCAAATTGACAA+TGG | 0.628311 | 8_1:-77660121 | Msa1216090:CDS |
| GAGGAGGATAAGGGTAAGGA+GGG | 0.628873 | 8_1:+77658850 | None:intergenic |
| GCACCACTCATAGCAGGGTG+AGG | 0.629783 | 8_1:+77659170 | None:intergenic |
| AATGGAGGAAAGAAAGGTGG+CGG | 0.631313 | 8_1:-77659434 | Msa1216090:CDS |
| ATGCCGCTGAATCAGCACCC+GGG | 0.631365 | 8_1:-77659884 | Msa1216090:CDS |
| GCATGGCTGTAAGGATCTGG+AGG | 0.631436 | 8_1:+77658831 | None:intergenic |
| TGAGATCTTACCGGCGACGG+TGG | 0.634936 | 8_1:-77661048 | Msa1216090:five_prime_UTR |
| CTTATGAGTGCTATGAAGGG+TGG | 0.638762 | 8_1:-77659623 | Msa1216090:CDS |
| GGTGGAGAAAACAAGAATGG+AGG | 0.639076 | 8_1:-77659329 | Msa1216090:CDS |
| AATAATCAAAATAACAATGG+GGG | 0.641757 | 8_1:-77659293 | Msa1216090:CDS |
| GATAGATGCAGAACAAGGGA+AGG | 0.641999 | 8_1:-77660281 | Msa1216090:CDS |
| CAGCTTATGAGTGCTATGAA+GGG | 0.642847 | 8_1:-77659626 | Msa1216090:CDS |
| ATATTGCATAAAATTAGAGA+GGG | 0.648642 | 8_1:+77658714 | None:intergenic |
| TACATGTAATTCACAGCAGG+AGG | 0.650237 | 8_1:+77658873 | None:intergenic |
| GGTAATGGAGGAAAGAAAGG+TGG | 0.651222 | 8_1:-77659437 | Msa1216090:CDS |
| AGAGAGACCGAGAATGACGC+CGG | 0.658961 | 8_1:+77661022 | None:intergenic |
| TACCTGCACCACTCATAGCA+GGG | 0.659944 | 8_1:+77659165 | None:intergenic |
| GAGTGGTGCAGGTAATAATG+TGG | 0.661904 | 8_1:-77659156 | Msa1216090:CDS |
| CAGAATCAAAACCAGAAGGG+TGG | 0.662734 | 8_1:-77660061 | Msa1216090:CDS |
| TGCATAAAATTAGAGAGGGT+AGG | 0.663015 | 8_1:+77658718 | None:intergenic |
| AATGGTGGAAATGGCAATGG+AGG | 0.665518 | 8_1:-77659521 | Msa1216090:CDS |
| CTGAGATAGATGCAGAACAA+GGG | 0.666808 | 8_1:-77660285 | Msa1216090:CDS |
| CAATAATCAAAATAACAATG+GGG | 0.668955 | 8_1:-77659294 | Msa1216090:CDS |
| ATTCCCCATAGGCATAGAAG+GGG | 0.672578 | 8_1:+77659682 | None:intergenic |
| GAGACCGAGAATGACGCCGG+TGG | 0.677480 | 8_1:+77661025 | None:intergenic |
| AAAGGTGGTGGAAACAACAA+AGG | 0.677851 | 8_1:-77660097 | Msa1216090:CDS |
| GGAAACAATAACCAACCCAA+AGG | 0.682874 | 8_1:-77660037 | Msa1216090:CDS |
| ATGCGAATGAACCAAATGGG+TGG | 0.690349 | 8_1:-77659122 | Msa1216090:CDS |
| GGAAACGGGCAGAAACCTGG+TGG | 0.691525 | 8_1:-77659578 | Msa1216090:CDS |
| TTCCCCATAGGCATAGAAGG+GGG | 0.698362 | 8_1:+77659683 | None:intergenic |
| AGTGGTGCAGGTAATAATGT+GGG | 0.701968 | 8_1:-77659155 | Msa1216090:CDS |
| AGAAATAATCAGAATCACGG+TGG | 0.703308 | 8_1:-77659401 | Msa1216090:CDS |
| GGCGGAGGATACTTTCAAGG+TGG | 0.717626 | 8_1:-77659068 | Msa1216090:CDS |
| CGTCGCCGGTAAGATCTCAG+TGG | 0.738206 | 8_1:+77661052 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATTTTGATTATTGTT+TGG | + | chr8_1:77659465-77659484 | None:intergenic | 10.0% |
| !! | CTTGTAATAAATAAAGATTT+GGG | + | chr8_1:77658907-77658926 | None:intergenic | 15.0% |
| !! | ACTTGTAATAAATAAAGATT+TGG | + | chr8_1:77658908-77658927 | None:intergenic | 15.0% |
| !! | ATAATTGAAAGCTATAATTA+AGG | + | chr8_1:77659234-77659253 | None:intergenic | 15.0% |
| !! | TAAAAAATTCATGTTTCATT+GGG | + | chr8_1:77660949-77660968 | None:intergenic | 15.0% |
| !! | CAAAAAAAGATAAAGAAACA+TGG | + | chr8_1:77659002-77659021 | None:intergenic | 20.0% |
| !! | TCTGCATACAAAAAAAAATA+AGG | + | chr8_1:77659098-77659117 | None:intergenic | 20.0% |
| !! | AAAATCTTACAGAAAATTGA+TGG | - | chr8_1:77659171-77659190 | Msa1216090:CDS | 20.0% |
| !! | AACATTTACTCTCAAAATTA+AGG | + | chr8_1:77659280-77659299 | None:intergenic | 20.0% |
| !!! | TTTTGATTATTGTTTGGTTT+GGG | + | chr8_1:77659459-77659478 | None:intergenic | 20.0% |
| !!! | ATTTTGATTATTGTTTGGTT+TGG | + | chr8_1:77659460-77659479 | None:intergenic | 20.0% |
| !! | AGCAATAATCAAAATAACAA+TGG | - | chr8_1:77660335-77660354 | Msa1216090:intron | 20.0% |
| !! | GCAATAATCAAAATAACAAT+GGG | - | chr8_1:77660336-77660355 | Msa1216090:intron | 20.0% |
| !! | CAATAATCAAAATAACAATG+GGG | - | chr8_1:77660337-77660356 | Msa1216090:intron | 20.0% |
| !! | AATAATCAAAATAACAATGG+GGG | - | chr8_1:77660338-77660357 | Msa1216090:intron | 20.0% |
| !!! | AATGGATTTCAAAAAATGAT+GGG | - | chr8_1:77660419-77660438 | Msa1216090:intron | 20.0% |
| !! | ATATTGCATAAAATTAGAGA+GGG | + | chr8_1:77660920-77660939 | None:intergenic | 20.0% |
| !! | TATATTGCATAAAATTAGAG+AGG | + | chr8_1:77660921-77660940 | None:intergenic | 20.0% |
| !! | CTAAAAAATTCATGTTTCAT+TGG | + | chr8_1:77660950-77660969 | None:intergenic | 20.0% |
| !!! | ACTATGTTTATTTTGTTCTT+TGG | - | chr8_1:77661071-77661090 | Msa1216090:five_prime_UTR | 20.0% |
| !! | AAAACAAATGTTATTGAGAA+TGG | - | chr8_1:77661165-77661184 | Msa1216090:five_prime_UTR | 20.0% |
| !! | AAACAAATGTTATTGAGAAT+GGG | - | chr8_1:77661166-77661185 | Msa1216090:five_prime_UTR | 20.0% |
| ! | AGAATGAGAAATAAAGGAAA+GGG | + | chr8_1:77658522-77658541 | None:intergenic | 25.0% |
| ! | AAGGAAAAGAGAGAAATAAA+TGG | + | chr8_1:77658783-77658802 | None:intergenic | 25.0% |
| ! | TGAAATGAAATGAGAATAGA+AGG | + | chr8_1:77658802-77658821 | None:intergenic | 25.0% |
| !!! | TATTTTATGTTCTTGTTTGG+TGG | + | chr8_1:77658845-77658864 | None:intergenic | 25.0% |
| !! | GAGTATTTTATGTTCTTGTT+TGG | + | chr8_1:77658848-77658867 | None:intergenic | 25.0% |
| ! | GTTACAAACTTTATTCCTAT+TGG | - | chr8_1:77658926-77658945 | Msa1216090:CDS | 25.0% |
| !!! | AGAAGAATTTTTGAAGATAC+AGG | - | chr8_1:77658959-77658978 | Msa1216090:CDS | 25.0% |
| !! | TCAAAATTAAGGTTCTGTTT+TGG | + | chr8_1:77659269-77659288 | None:intergenic | 25.0% |
| !!! | TGATTTTAGTGATGATGAAA+TGG | - | chr8_1:77659836-77659855 | Msa1216090:CDS | 25.0% |
| !! | CAATGGATTTCAAAAAATGA+TGG | - | chr8_1:77660418-77660437 | Msa1216090:intron | 25.0% |
| AAATAAAGGAAAGGGAAGAA+AGG | + | chr8_1:77658514-77658533 | None:intergenic | 30.0% | |
| GAGAATGAGAAATAAAGGAA+AGG | + | chr8_1:77658523-77658542 | None:intergenic | 30.0% | |
| !!! | TTGTTTGGTGGAGTTTTATT+TGG | + | chr8_1:77658833-77658852 | None:intergenic | 30.0% |
| GGTGATTATAGATCTGAAAA+TGG | + | chr8_1:77658870-77658889 | None:intergenic | 30.0% | |
| ATTTGGGCTATAGAGAAAAA+TGG | + | chr8_1:77658891-77658910 | None:intergenic | 30.0% | |
| !! | TGTGTTGATTAATGAATGAC+AGG | - | chr8_1:77659312-77659331 | Msa1216090:CDS | 30.0% |
| AAGAACATGCAAATTGACAA+TGG | - | chr8_1:77659510-77659529 | Msa1216090:CDS | 30.0% | |
| AAATCAGAATCAAAACCAGA+AGG | - | chr8_1:77659566-77659585 | Msa1216090:CDS | 30.0% | |
| AATCAGAATCAAAACCAGAA+GGG | - | chr8_1:77659567-77659586 | Msa1216090:CDS | 30.0% | |
| CAACAAATACAACAACTACA+AGG | - | chr8_1:77659621-77659640 | Msa1216090:CDS | 30.0% | |
| AACAACTTCAACAGATGAAA+GGG | - | chr8_1:77659691-77659710 | Msa1216090:CDS | 30.0% | |
| ! | CAAGATCTAGCTCAATTTAA+AGG | - | chr8_1:77659717-77659736 | Msa1216090:CDS | 30.0% |
| TTAACACCTTTAGCATCTTT+AGG | + | chr8_1:77659792-77659811 | None:intergenic | 30.0% | |
| !! | TGATGAGTTTGATGATGAAA+TGG | - | chr8_1:77659899-77659918 | Msa1216090:CDS | 30.0% |
| TTCAAATTCATGGCATGAAT+GGG | - | chr8_1:77660165-77660184 | Msa1216090:CDS | 30.0% | |
| GGAAGAAATAATCAGAATCA+CGG | - | chr8_1:77660227-77660246 | Msa1216090:CDS | 30.0% | |
| AAATAACAATGGGGGTAAAA+AGG | - | chr8_1:77660346-77660365 | Msa1216090:intron | 30.0% | |
| AATAACAATGGGGGTAAAAA+GGG | - | chr8_1:77660347-77660366 | Msa1216090:intron | 30.0% | |
| AATGTTCAAGCTATGAACAA+TGG | - | chr8_1:77660401-77660420 | Msa1216090:intron | 30.0% | |
| ! | TGATGTTGTTGTTGTTGATA+AGG | + | chr8_1:77660623-77660642 | None:intergenic | 30.0% |
| CATCAAACAAACAATGTTCA+TGG | - | chr8_1:77660865-77660884 | Msa1216090:five_prime_UTR | 30.0% | |
| TTCTATAAACTACTCCTCTA+TGG | + | chr8_1:77661034-77661053 | None:intergenic | 30.0% | |
| GGAAGAAGAAGAAAAAGAGA+GGG | + | chr8_1:77658493-77658512 | None:intergenic | 35.0% | |
| AGGAAGAAGAAGAAAAAGAG+AGG | + | chr8_1:77658494-77658513 | None:intergenic | 35.0% | |
| GGAGAGAGAATGAGAAATAA+AGG | + | chr8_1:77658528-77658547 | None:intergenic | 35.0% | |
| TAATACCACTGAGATCTTAC+CGG | - | chr8_1:77658574-77658593 | Msa1216090:three_prime_UTR | 35.0% | |
| AGTAGTCATTGAGAGAGAAT+GGG | + | chr8_1:77658693-77658712 | None:intergenic | 35.0% | |
| TAGTAGTCATTGAGAGAGAA+TGG | + | chr8_1:77658694-77658713 | None:intergenic | 35.0% | |
| AAGAAGCAAGTTTGAGAGTT+AGG | + | chr8_1:77658738-77658757 | None:intergenic | 35.0% | |
| CTTCTTTACTCATGACCAAT+AGG | + | chr8_1:77658944-77658963 | None:intergenic | 35.0% | |
| AAAGTGAACATACACTGTGA+TGG | - | chr8_1:77659129-77659148 | Msa1216090:CDS | 35.0% | |
| GCTTCTTGATGAGAACATTT+GGG | + | chr8_1:77659398-77659417 | None:intergenic | 35.0% | |
| AGCTTCTTGATGAGAACATT+TGG | + | chr8_1:77659399-77659418 | None:intergenic | 35.0% | |
| ATCAAGAAGCTTGCAAAATC+AGG | - | chr8_1:77659408-77659427 | Msa1216090:CDS | 35.0% | |
| TCAAGAAGCTTGCAAAATCA+GGG | - | chr8_1:77659409-77659428 | Msa1216090:CDS | 35.0% | |
| ACTGATTAACAACGTTGTTC+TGG | + | chr8_1:77659488-77659507 | None:intergenic | 35.0% | |
| ATGCAAATTGACAATGGCAA+AGG | - | chr8_1:77659516-77659535 | Msa1216090:CDS | 35.0% | |
| ! | TGTATTTGTTGACCACCTTT+GGG | + | chr8_1:77659612-77659631 | None:intergenic | 35.0% |
| ! | TTGTATTTGTTGACCACCTT+TGG | + | chr8_1:77659613-77659632 | None:intergenic | 35.0% |
| CAACAACTTCAACAGATGAA+AGG | - | chr8_1:77659690-77659709 | Msa1216090:CDS | 35.0% | |
| !! | CATCTTTAGGATTCTGATTC+GGG | + | chr8_1:77659779-77659798 | None:intergenic | 35.0% |
| !! | GCATCTTTAGGATTCTGATT+CGG | + | chr8_1:77659780-77659799 | None:intergenic | 35.0% |
| CAGAATCCTAAAGATGCTAA+AGG | - | chr8_1:77659783-77659802 | Msa1216090:CDS | 35.0% | |
| CTAAAATCATCCTCATCTTC+AGG | + | chr8_1:77659825-77659844 | None:intergenic | 35.0% | |
| !! | GAGTTTGATGATGAAATGGT+TGG | - | chr8_1:77659903-77659922 | Msa1216090:CDS | 35.0% |
| ! | TGATGATGAAATGGTTGGTT+TGG | - | chr8_1:77659908-77659927 | Msa1216090:CDS | 35.0% |
| ! | ATGAAGGGTGGCAATTTTAA+TGG | - | chr8_1:77660020-77660039 | Msa1216090:CDS | 35.0% |
| TTCATGCCATGAATTTGAAC+TGG | + | chr8_1:77660164-77660183 | None:intergenic | 35.0% | |
| GTTCAAATTCATGGCATGAA+TGG | - | chr8_1:77660164-77660183 | Msa1216090:CDS | 35.0% | |
| TCAAATTCATGGCATGAATG+GGG | - | chr8_1:77660166-77660185 | Msa1216090:CDS | 35.0% | |
| !! | AATGGTAATGGAGGAAAGAA+AGG | - | chr8_1:77660191-77660210 | Msa1216090:CDS | 35.0% |
| AGAAATAATCAGAATCACGG+TGG | - | chr8_1:77660230-77660249 | Msa1216090:CDS | 35.0% | |
| ! | GGATTTCAAAAAATGATGGG+CGG | - | chr8_1:77660422-77660441 | Msa1216090:intron | 35.0% |
| AGTATGCGAATGAACCAAAT+GGG | - | chr8_1:77660506-77660525 | Msa1216090:CDS | 35.0% | |
| ! | TGTTTTCATCACTGAAAGCA+TGG | + | chr8_1:77660820-77660839 | None:intergenic | 35.0% |
| ACAAACAATGTTCATGGTGA+TGG | - | chr8_1:77660871-77660890 | Msa1216090:five_prime_UTR | 35.0% | |
| TGCATAAAATTAGAGAGGGT+AGG | + | chr8_1:77660916-77660935 | None:intergenic | 35.0% | |
| ! | TTGATCCCCTTTTCATCTAT+AGG | - | chr8_1:77660995-77661014 | Msa1216090:five_prime_UTR | 35.0% |
| ! | TGATCCCCTTTTCATCTATA+GGG | - | chr8_1:77660996-77661015 | Msa1216090:five_prime_UTR | 35.0% |
| AAACCCCCTATAGATGAAAA+GGG | + | chr8_1:77661004-77661023 | None:intergenic | 35.0% | |
| !! | AGTTTGCTCTTTTCTTCTCT+TGG | - | chr8_1:77661209-77661228 | Msa1216090:five_prime_UTR | 35.0% |
| TACGGTTTCTATACGAGTTG+TGG | + | chr8_1:77658463-77658482 | None:intergenic | 40.0% | |
| ! | AAAAGAGAGGGAGGTGTATA+CGG | + | chr8_1:77658481-77658500 | None:intergenic | 40.0% |
| AGAAGAAGAAAAAGAGAGGG+AGG | + | chr8_1:77658490-77658509 | None:intergenic | 40.0% | |
| TTCTCTCTCACTAACACACT+TGG | - | chr8_1:77658641-77658660 | Msa1216090:three_prime_UTR | 40.0% | |
| TCTCTCTCACTAACACACTT+GGG | - | chr8_1:77658642-77658661 | Msa1216090:three_prime_UTR | 40.0% | |
| GTAGTCATTGAGAGAGAATG+GGG | + | chr8_1:77658692-77658711 | None:intergenic | 40.0% | |
| AGAGTTAGGAAGAGAGAGAA+TGG | + | chr8_1:77658724-77658743 | None:intergenic | 40.0% | |
| ! | AAGAAACATGGAGAGTGTGA+TGG | + | chr8_1:77658990-77659009 | None:intergenic | 40.0% |
| ACTGAGATAGATGCAGAACA+AGG | - | chr8_1:77659345-77659364 | Msa1216090:CDS | 40.0% | |
| CTGAGATAGATGCAGAACAA+GGG | - | chr8_1:77659346-77659365 | Msa1216090:CDS | 40.0% | |
| CAAATTGACAATGGCAAAGG+TGG | - | chr8_1:77659519-77659538 | Msa1216090:CDS | 40.0% | |
| !! | AAAGGTGGTGGAAACAACAA+AGG | - | chr8_1:77659534-77659553 | Msa1216090:CDS | 40.0% |
| GGAAACAATAACCAACCCAA+AGG | - | chr8_1:77659594-77659613 | Msa1216090:CDS | 40.0% | |
| AACAATAACCAACCCAAAGG+TGG | - | chr8_1:77659597-77659616 | Msa1216090:CDS | 40.0% | |
| ATTTGATGTGCCTGAAGATG+AGG | - | chr8_1:77659812-77659831 | Msa1216090:CDS | 40.0% | |
| GAAGGGGGTTTCATCTTATT+AGG | + | chr8_1:77659936-77659955 | None:intergenic | 40.0% | |
| GTGCTCACATGATGTTGAAT+GGG | - | chr8_1:77659973-77659992 | Msa1216090:CDS | 40.0% | |
| TTCATAGCACTCATAAGCTG+TGG | + | chr8_1:77660005-77660024 | None:intergenic | 40.0% | |
| ACAGCTTATGAGTGCTATGA+AGG | - | chr8_1:77660004-77660023 | Msa1216090:CDS | 40.0% | |
| CAGCTTATGAGTGCTATGAA+GGG | - | chr8_1:77660005-77660024 | Msa1216090:CDS | 40.0% | |
| !! | AAGGGTGGCAATTTTAATGG+CGG | - | chr8_1:77660023-77660042 | Msa1216090:CDS | 40.0% |
| TTCATGCCATGAGTTTGAAC+CGG | + | chr8_1:77660092-77660111 | None:intergenic | 40.0% | |
| GTTCAAACTCATGGCATGAA+TGG | - | chr8_1:77660092-77660111 | Msa1216090:CDS | 40.0% | |
| ! | ATGAATGGTGGAAATGGCAA+TGG | - | chr8_1:77660107-77660126 | Msa1216090:CDS | 40.0% |
| AATGGCAATGGAGGAAAGAA+AGG | - | chr8_1:77660119-77660138 | Msa1216090:CDS | 40.0% | |
| CAAATTCATGGCATGAATGG+GGG | - | chr8_1:77660167-77660186 | Msa1216090:CDS | 40.0% | |
| ATGAATGGGGGAAATGGTAA+TGG | - | chr8_1:77660179-77660198 | Msa1216090:CDS | 40.0% | |
| AATAATCAGAATCACGGTGG+AGG | - | chr8_1:77660233-77660252 | Msa1216090:CDS | 40.0% | |
| ! | CAAAAATAGCGGTGGTTTTC+CGG | - | chr8_1:77660259-77660278 | Msa1216090:CDS | 40.0% |
| !! | TTTCAAAAAATGATGGGCGG+CGG | - | chr8_1:77660425-77660444 | Msa1216090:intron | 40.0% |
| AGTGGTGCAGGTAATAATGT+GGG | - | chr8_1:77660476-77660495 | Msa1216090:CDS | 40.0% | |
| TGGTTCATTCGCATACTCAT+TGG | + | chr8_1:77660503-77660522 | None:intergenic | 40.0% | |
| GAGTATGCGAATGAACCAAA+TGG | - | chr8_1:77660505-77660524 | Msa1216090:CDS | 40.0% | |
| CAGAAATGTTACCACCCATT+TGG | + | chr8_1:77660523-77660542 | None:intergenic | 40.0% | |
| GGTAACATTTCTGCTGTTCA+AGG | - | chr8_1:77660530-77660549 | Msa1216090:intron | 40.0% | |
| GCAACAGCAACAACAGTTAA+TGG | - | chr8_1:77660652-77660671 | Msa1216090:intron | 40.0% | |
| TACATGTAATTCACAGCAGG+AGG | + | chr8_1:77660761-77660780 | None:intergenic | 40.0% | |
| ! | GATCCCCTTTTCATCTATAG+GGG | - | chr8_1:77660997-77661016 | Msa1216090:five_prime_UTR | 40.0% |
| ! | ATCCCCTTTTCATCTATAGG+GGG | - | chr8_1:77660998-77661017 | Msa1216090:five_prime_UTR | 40.0% |
| AACCCCCTATAGATGAAAAG+GGG | + | chr8_1:77661003-77661022 | None:intergenic | 40.0% | |
| GAAACCCCCTATAGATGAAA+AGG | + | chr8_1:77661005-77661024 | None:intergenic | 40.0% | |
| GGGGTTTCTAATTACCATAG+AGG | - | chr8_1:77661017-77661036 | Msa1216090:five_prime_UTR | 40.0% | |
| AGAAAAGAGCAAACTGAGCT+GGG | + | chr8_1:77661204-77661223 | None:intergenic | 40.0% | |
| AAGAAAAGAGCAAACTGAGC+TGG | + | chr8_1:77661205-77661224 | None:intergenic | 40.0% | |
| GATAGATGCAGAACAAGGGA+AGG | - | chr8_1:77659350-77659369 | Msa1216090:CDS | 45.0% | |
| AAGGGAAGGTCACAGTTTCA+GGG | - | chr8_1:77659364-77659383 | Msa1216090:CDS | 45.0% | |
| CAGGGAAACATGCTGAGTTA+TGG | - | chr8_1:77659427-77659446 | Msa1216090:CDS | 45.0% | |
| ATTGACAATGGCAAAGGTGG+TGG | - | chr8_1:77659522-77659541 | Msa1216090:CDS | 45.0% | |
| CAGAATCAAAACCAGAAGGG+TGG | - | chr8_1:77659570-77659589 | Msa1216090:CDS | 45.0% | |
| AATCAAAACCAGAAGGGTGG+TGG | - | chr8_1:77659573-77659592 | Msa1216090:CDS | 45.0% | |
| TATTGTTTCCACCACCCTTC+TGG | + | chr8_1:77659584-77659603 | None:intergenic | 45.0% | |
| TTTGTTGACCACCTTTGGGT+TGG | + | chr8_1:77659608-77659627 | None:intergenic | 45.0% | |
| !! | TAGGATTCTGATTCGGGTTC+TGG | + | chr8_1:77659773-77659792 | None:intergenic | 45.0% |
| AAACCCCCTTCTATGCCTAT+GGG | - | chr8_1:77659945-77659964 | Msa1216090:CDS | 45.0% | |
| ATTCCCCATAGGCATAGAAG+GGG | + | chr8_1:77659952-77659971 | None:intergenic | 45.0% | |
| CATTCCCCATAGGCATAGAA+GGG | + | chr8_1:77659953-77659972 | None:intergenic | 45.0% | |
| GGTGCTCACATGATGTTGAA+TGG | - | chr8_1:77659972-77659991 | Msa1216090:CDS | 45.0% | |
| CTTATGAGTGCTATGAAGGG+TGG | - | chr8_1:77660008-77660027 | Msa1216090:CDS | 45.0% | |
| !! | AATTTTAATGGCGGTGGTGG+CGG | - | chr8_1:77660032-77660051 | Msa1216090:CDS | 45.0% |
| CAAACTCATGGCATGAATGG+TGG | - | chr8_1:77660095-77660114 | Msa1216090:CDS | 45.0% | |
| ! | CATGGCATGAATGGTGGAAA+TGG | - | chr8_1:77660101-77660120 | Msa1216090:CDS | 45.0% |
| ! | AATGGTGGAAATGGCAATGG+AGG | - | chr8_1:77660110-77660129 | Msa1216090:CDS | 45.0% |
| AATGGAGGAAAGAAAGGTGG+TGG | - | chr8_1:77660125-77660144 | Msa1216090:CDS | 45.0% | |
| CCATGAATTTGAACTGGCAC+AGG | + | chr8_1:77660158-77660177 | None:intergenic | 45.0% | |
| CCTGTGCCAGTTCAAATTCA+TGG | - | chr8_1:77660155-77660174 | Msa1216090:CDS | 45.0% | |
| !! | AATGGGGGAAATGGTAATGG+AGG | - | chr8_1:77660182-77660201 | Msa1216090:CDS | 45.0% |
| !! | GGTAATGGAGGAAAGAAAGG+TGG | - | chr8_1:77660194-77660213 | Msa1216090:CDS | 45.0% |
| AATGGAGGAAAGAAAGGTGG+CGG | - | chr8_1:77660125-77660144 | Msa1216090:CDS | 45.0% | |
| GGTGGAGGCAACAAAAATAG+CGG | - | chr8_1:77660248-77660267 | Msa1216090:CDS | 45.0% | |
| ! | GGTTTTCCGGAGGCTAAAAA+TGG | - | chr8_1:77660272-77660291 | Msa1216090:CDS | 45.0% |
| TTTCCGGAGGCTAAAAATGG+TGG | - | chr8_1:77660275-77660294 | Msa1216090:CDS | 45.0% | |
| !! | GGTGGTGGAGAAAACAAGAA+TGG | - | chr8_1:77660299-77660318 | Msa1216090:CDS | 45.0% |
| GGTGGAGAAAACAAGAATGG+AGG | - | chr8_1:77660302-77660321 | Msa1216090:intron | 45.0% | |
| GGTATGTCGATACCAATTGC+TGG | - | chr8_1:77660368-77660387 | Msa1216090:intron | 45.0% | |
| TCGATACCAATTGCTGGTAG+TGG | - | chr8_1:77660374-77660393 | Msa1216090:intron | 45.0% | |
| !! | ATACCAATTGCTGGTAGTGG+TGG | - | chr8_1:77660377-77660396 | Msa1216090:intron | 45.0% |
| TTACCACCACTACCAGCAAT+TGG | + | chr8_1:77660383-77660402 | None:intergenic | 45.0% | |
| GAGTGGTGCAGGTAATAATG+TGG | - | chr8_1:77660475-77660494 | Msa1216090:CDS | 45.0% | |
| ATGCGAATGAACCAAATGGG+TGG | - | chr8_1:77660509-77660528 | Msa1216090:CDS | 45.0% | |
| GATTACCCGACATCATTTCC+GGG | + | chr8_1:77660601-77660620 | None:intergenic | 45.0% | |
| GGATTACCCGACATCATTTC+CGG | + | chr8_1:77660602-77660621 | None:intergenic | 45.0% | |
| AGCAGCCAATGATGTATGCA+AGG | - | chr8_1:77660732-77660751 | Msa1216090:five_prime_UTR | 45.0% | |
| ATGTAATTCACAGCAGGAGG+TGG | + | chr8_1:77660758-77660777 | None:intergenic | 45.0% | |
| GGGTACATGTAATTCACAGC+AGG | + | chr8_1:77660764-77660783 | None:intergenic | 45.0% | |
| AAGGATCTGGAGGAGGATAA+GGG | + | chr8_1:77660793-77660812 | None:intergenic | 45.0% | |
| TAAGGATCTGGAGGAGGATA+AGG | + | chr8_1:77660794-77660813 | None:intergenic | 45.0% | |
| AAAGCATGGCTGTAAGGATC+TGG | + | chr8_1:77660806-77660825 | None:intergenic | 45.0% | |
| ! | TCACTGAAAGCATGGCTGTA+AGG | + | chr8_1:77660812-77660831 | None:intergenic | 45.0% |
| GAATCACATGACATTGCAGC+TGG | + | chr8_1:77660846-77660865 | None:intergenic | 45.0% | |
| !!! | TAAAAAATATGTTTATATTT+TGG | - | chr8_1:77661115-77661134 | Msa1216090:five_prime_UTR | 5.0% |
| !!! | AAAAAATATGTTTATATTTT+GGG | - | chr8_1:77661116-77661135 | Msa1216090:five_prime_UTR | 5.0% |
| AGAGAGAGAGAGAGTTGCAG+AGG | + | chr8_1:77658549-77658568 | None:intergenic | 50.0% | |
| CAAGGGAAGGTCACAGTTTC+AGG | - | chr8_1:77659363-77659382 | Msa1216090:CDS | 50.0% | |
| GGTCACAGTTTCAGGGAATG+TGG | - | chr8_1:77659371-77659390 | Msa1216090:CDS | 50.0% | |
| TGAAGTTGTTGCTGCTGCTG+AGG | + | chr8_1:77659654-77659673 | None:intergenic | 50.0% | |
| GAAACCCCCTTCTATGCCTA+TGG | - | chr8_1:77659944-77659963 | Msa1216090:CDS | 50.0% | |
| AACCCCCTTCTATGCCTATG+GGG | - | chr8_1:77659946-77659965 | Msa1216090:CDS | 50.0% | |
| TTCCCCATAGGCATAGAAGG+GGG | + | chr8_1:77659951-77659970 | None:intergenic | 50.0% | |
| CCATTCCCCATAGGCATAGA+AGG | + | chr8_1:77659954-77659973 | None:intergenic | 50.0% | |
| CCTTCTATGCCTATGGGGAA+TGG | - | chr8_1:77659951-77659970 | Msa1216090:CDS | 50.0% | |
| ATGTGAGCACCATTCCCCAT+AGG | + | chr8_1:77659963-77659982 | None:intergenic | 50.0% | |
| !! | GGTGGCAATTTTAATGGCGG+TGG | - | chr8_1:77660026-77660045 | Msa1216090:CDS | 50.0% |
| !! | GGCAATTTTAATGGCGGTGG+TGG | - | chr8_1:77660029-77660048 | Msa1216090:CDS | 50.0% |
| GGCAATGGAGGAAAGAAAGG+TGG | - | chr8_1:77660122-77660141 | Msa1216090:CDS | 50.0% | |
| CATGGCATGAATGGGGGAAA+TGG | - | chr8_1:77660173-77660192 | Msa1216090:CDS | 50.0% | |
| GGAGGCAACAAAAATAGCGG+TGG | - | chr8_1:77660251-77660270 | Msa1216090:CDS | 50.0% | |
| ! | AAATAGCGGTGGTTTTCCGG+AGG | - | chr8_1:77660262-77660281 | Msa1216090:CDS | 50.0% |
| !!! | CCACCACCATTTTTAGCCTC+CGG | + | chr8_1:77660281-77660300 | None:intergenic | 50.0% |
| !! | GAGGCTAAAAATGGTGGTGG+TGG | - | chr8_1:77660281-77660300 | Msa1216090:CDS | 50.0% |
| !! | GCTAAAAATGGTGGTGGTGG+TGG | - | chr8_1:77660284-77660303 | Msa1216090:CDS | 50.0% |
| TACCTGCACCACTCATAGCA+GGG | + | chr8_1:77660469-77660488 | None:intergenic | 50.0% | |
| TTACCTGCACCACTCATAGC+AGG | + | chr8_1:77660470-77660489 | None:intergenic | 50.0% | |
| TTCTGCTGTTCAAGGCCTAC+CGG | - | chr8_1:77660538-77660557 | Msa1216090:intron | 50.0% | |
| GGAGGATACTTTCAAGGTGG+TGG | - | chr8_1:77660566-77660585 | Msa1216090:intron | 50.0% | |
| ! | GGATACTTTCAAGGTGGTGG+TGG | - | chr8_1:77660569-77660588 | Msa1216090:intron | 50.0% |
| GAACCAACAACGTGCTGCAA+TGG | - | chr8_1:77660688-77660707 | Msa1216090:exon | 50.0% | |
| ! | GGTGGCCTTGCATACATCAT+TGG | + | chr8_1:77660740-77660759 | None:intergenic | 50.0% |
| GAGGAGGATAAGGGTAAGGA+GGG | + | chr8_1:77660784-77660803 | None:intergenic | 50.0% | |
| TCTGGAGGAGGATAAGGGTA+AGG | + | chr8_1:77660788-77660807 | None:intergenic | 50.0% | |
| CACTGAGATCTTACCGGCGA+CGG | - | chr8_1:77658580-77658599 | Msa1216090:three_prime_UTR | 55.0% | |
| AGAGAGACCGAGAATGACGC+CGG | + | chr8_1:77658612-77658631 | None:intergenic | 55.0% | |
| !! | TTCTGATTCGGGTTCTGGCC+CGG | + | chr8_1:77659768-77659787 | None:intergenic | 55.0% |
| CCATGAGTTTGAACCGGCAC+AGG | + | chr8_1:77660086-77660105 | None:intergenic | 55.0% | |
| !! | CCTGTGCCGGTTCAAACTCA+TGG | - | chr8_1:77660083-77660102 | Msa1216090:CDS | 55.0% |
| ! | GGAGGAAAGAAAGGTGGTGG+TGG | - | chr8_1:77660128-77660147 | Msa1216090:CDS | 55.0% |
| !! | GGAAAGAAAGGTGGTGGTGG+TGG | - | chr8_1:77660131-77660150 | Msa1216090:CDS | 55.0% |
| CCGGAGGCTAAAAATGGTGG+TGG | - | chr8_1:77660278-77660297 | Msa1216090:CDS | 55.0% | |
| !! | CAAAAAATGATGGGCGGCGG+CGG | - | chr8_1:77660428-77660447 | Msa1216090:intron | 55.0% |
| CATCCTCACCCTGCTATGAG+TGG | - | chr8_1:77660458-77660477 | Msa1216090:intron | 55.0% | |
| !! | TGAAAGTATCCTCCGCCAGC+CGG | + | chr8_1:77660560-77660579 | None:intergenic | 55.0% |
| GCTGGCGGAGGATACTTTCA+AGG | - | chr8_1:77660560-77660579 | Msa1216090:intron | 55.0% | |
| GGCGGAGGATACTTTCAAGG+TGG | - | chr8_1:77660563-77660582 | Msa1216090:intron | 55.0% | |
| !! | TTTCAAGGTGGTGGTGGTCC+AGG | - | chr8_1:77660575-77660594 | Msa1216090:intron | 55.0% |
| TCCAGGCCCGGAAATGATGT+CGG | - | chr8_1:77660592-77660611 | Msa1216090:intron | 55.0% | |
| CCACCATTGCAGCACGTTGT+TGG | + | chr8_1:77660694-77660713 | None:intergenic | 55.0% | |
| CCAACAACGTGCTGCAATGG+TGG | - | chr8_1:77660691-77660710 | Msa1216090:exon | 55.0% | |
| GGAGGAGGATAAGGGTAAGG+AGG | + | chr8_1:77660785-77660804 | None:intergenic | 55.0% | |
| TGGCTGTAAGGATCTGGAGG+AGG | + | chr8_1:77660800-77660819 | None:intergenic | 55.0% | |
| GCATGGCTGTAAGGATCTGG+AGG | + | chr8_1:77660803-77660822 | None:intergenic | 55.0% | |
| CGTCGCCGGTAAGATCTCAG+TGG | + | chr8_1:77658582-77658601 | None:intergenic | 60.0% | |
| TGAGATCTTACCGGCGACGG+TGG | - | chr8_1:77658583-77658602 | Msa1216090:three_prime_UTR | 60.0% | |
| GATGCCGCTGAATCAGCACC+CGG | - | chr8_1:77659746-77659765 | Msa1216090:CDS | 60.0% | |
| ATGCCGCTGAATCAGCACCC+GGG | - | chr8_1:77659747-77659766 | Msa1216090:CDS | 60.0% | |
| !! | TCTGATTCGGGTTCTGGCCC+GGG | + | chr8_1:77659767-77659786 | None:intergenic | 60.0% |
| !! | AATGGCGGTGGTGGCGGAAA+CGG | - | chr8_1:77660038-77660057 | Msa1216090:CDS | 60.0% |
| GGAAACGGGCAGAAACCTGG+TGG | - | chr8_1:77660053-77660072 | Msa1216090:CDS | 60.0% | |
| AACGGGCAGAAACCTGGTGG+TGG | - | chr8_1:77660056-77660075 | Msa1216090:CDS | 60.0% | |
| ! | GGAGGAAAGAAAGGTGGCGG+CGG | - | chr8_1:77660200-77660219 | Msa1216090:CDS | 60.0% |
| GCACCACTCATAGCAGGGTG+AGG | + | chr8_1:77660464-77660483 | None:intergenic | 60.0% | |
| CACCCTGCTATGAGTGGTGC+AGG | - | chr8_1:77660464-77660483 | Msa1216090:CDS | 60.0% | |
| CCAGGCCCGGAAATGATGTC+GGG | - | chr8_1:77660593-77660612 | Msa1216090:intron | 60.0% | |
| GTGGCCACCGGCGTCATTCT+CGG | - | chr8_1:77658602-77658621 | Msa1216090:three_prime_UTR | 65.0% | |
| GAGACCGAGAATGACGCCGG+TGG | + | chr8_1:77658609-77658628 | None:intergenic | 65.0% | |
| !! | TGGCCCGGGTGCTGATTCAG+CGG | + | chr8_1:77659753-77659772 | None:intergenic | 65.0% |
| !! | ATGGCGGTGGTGGCGGAAAC+GGG | - | chr8_1:77660039-77660058 | Msa1216090:CDS | 65.0% |
| GGCGGAAACGGGCAGAAACC+TGG | - | chr8_1:77660050-77660069 | Msa1216090:CDS | 65.0% | |
| !! | GGGCAGAAACCTGGTGGTGG+AGG | - | chr8_1:77660059-77660078 | Msa1216090:CDS | 65.0% |
| !! | TGGTGGTGGAGGACCTGTGC+CGG | - | chr8_1:77660070-77660089 | Msa1216090:CDS | 65.0% |
| ! | GGAAAGAAAGGTGGCGGCGG+TGG | - | chr8_1:77660203-77660222 | Msa1216090:CDS | 65.0% |
| ! | AAGAAAGGTGGCGGCGGTGG+TGG | - | chr8_1:77660206-77660225 | Msa1216090:CDS | 65.0% |
| !! | AAAATGATGGGCGGCGGCGG+AGG | - | chr8_1:77660431-77660450 | Msa1216090:intron | 65.0% |
| GCTGTTCAAGGCCTACCGGC+TGG | - | chr8_1:77660542-77660561 | Msa1216090:intron | 65.0% | |
| ! | GTTCAAGGCCTACCGGCTGG+CGG | - | chr8_1:77660545-77660564 | Msa1216090:intron | 65.0% |
| AGTATCCTCCGCCAGCCGGT+AGG | + | chr8_1:77660556-77660575 | None:intergenic | 65.0% | |
| CCCGACATCATTTCCGGGCC+TGG | + | chr8_1:77660596-77660615 | None:intergenic | 65.0% | |
| TTACCGGCGACGGTGGCCAC+CGG | - | chr8_1:77658590-77658609 | Msa1216090:three_prime_UTR | 70.0% | |
| GGCACAGGTCCTCCACCACC+AGG | + | chr8_1:77660071-77660090 | None:intergenic | 70.0% | |
| !! | AGGTGGTGGTGGTCCAGGCC+CGG | - | chr8_1:77660580-77660599 | Msa1216090:intron | 70.0% |
| !! | ATGATGGGCGGCGGCGGAGG+TGG | - | chr8_1:77660434-77660453 | Msa1216090:intron | 75.0% |
| ! | CAAGGCCTACCGGCTGGCGG+AGG | - | chr8_1:77660548-77660567 | Msa1216090:intron | 75.0% |
| ! | ACGCCGGTGGCCACCGTCGC+CGG | + | chr8_1:77658596-77658615 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 77658415 | 77661238 | 77658415 | ID=Msa1216090;Name=Msa1216090 |
| chr8_1 | mRNA | 77658415 | 77661238 | 77658415 | ID=Msa1216090-mRNA-1;Parent=Msa1216090;Name=Msa1216090-mRNA-1;_AED=0.03;_eAED=0.03;_QI=536|1|1|1|1|1|3|376|544 |
| chr8_1 | exon | 77658415 | 77660319 | 77658415 | ID=Msa1216090-mRNA-1:exon:26840;Parent=Msa1216090-mRNA-1 |
| chr8_1 | exon | 77660461 | 77660536 | 77660461 | ID=Msa1216090-mRNA-1:exon:26839;Parent=Msa1216090-mRNA-1 |
| chr8_1 | exon | 77660673 | 77661238 | 77660673 | ID=Msa1216090-mRNA-1:exon:26838;Parent=Msa1216090-mRNA-1 |
| chr8_1 | five_prime_UTR | 77660703 | 77661238 | 77660703 | ID=Msa1216090-mRNA-1:five_prime_utr;Parent=Msa1216090-mRNA-1 |
| chr8_1 | CDS | 77660673 | 77660702 | 77660673 | ID=Msa1216090-mRNA-1:cds;Parent=Msa1216090-mRNA-1 |
| chr8_1 | CDS | 77660461 | 77660536 | 77660461 | ID=Msa1216090-mRNA-1:cds;Parent=Msa1216090-mRNA-1 |
| chr8_1 | CDS | 77658791 | 77660319 | 77658791 | ID=Msa1216090-mRNA-1:cds;Parent=Msa1216090-mRNA-1 |
| chr8_1 | three_prime_UTR | 77658415 | 77658790 | 77658415 | ID=Msa1216090-mRNA-1:three_prime_utr;Parent=Msa1216090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
