AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1116250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1116250 MtrunA17_Chr1g0184031 65.217 138 23 3 1 125 78 203 2.40e-50 164
Msa1116250 MtrunA17_Chr1g0184031 90.244 41 4 0 202 242 35 75 1.16e-16 76.3
Msa1116250 MtrunA17_Chr1g0184011 63.309 139 25 4 1 125 78 204 3.37e-48 158
Msa1116250 MtrunA17_Chr1g0184011 92.857 42 3 0 202 243 35 76 1.10e-18 81.6
Msa1116250 MtrunA17_Chr4g0049701 84.337 83 13 0 107 189 69 151 6.56e-46 155
Msa1116250 MtrunA17_Chr1g0183981 66.667 120 26 4 1 107 70 188 3.63e-43 145
Msa1116250 MtrunA17_Chr4g0049671 72.727 88 24 0 107 194 63 150 1.20e-38 142
Msa1116250 MtrunA17_Chr1g0184071 66.000 100 20 2 3 89 65 163 2.98e-34 121
Msa1116250 MtrunA17_Chr4g0049651 67.073 82 27 0 107 188 72 153 1.46e-31 121
Msa1116250 MtrunA17_Chr1g0184061 63.636 99 23 3 1 87 72 169 8.36e-31 113
Msa1116250 MtrunA17_Chr4g0026881 45.536 112 45 2 7 103 97 207 5.04e-24 96.3
Msa1116250 MtrunA17_Chr2g0283171 70.175 57 17 0 4 60 60 116 5.64e-22 89.0
Msa1116250 MtrunA17_Chr4g0026931 46.226 106 40 3 9 99 133 236 6.50e-21 89.0
Msa1116250 MtrunA17_Chr4g0046161 62.712 59 22 0 3 61 53 111 8.89e-21 84.7
Msa1116250 MtrunA17_Chr8g0335311 73.077 52 14 0 7 58 96 147 8.04e-20 84.3
Msa1116250 MtrunA17_Chr2g0283181 67.241 58 18 1 7 64 149 205 3.80e-19 84.3
Msa1116250 MtrunA17_Chr8g0335331 71.154 52 15 0 7 58 125 176 6.14e-19 82.0
Msa1116250 MtrunA17_Chr1g0196871 72.222 54 15 0 7 60 16 69 1.03e-18 78.6
Msa1116250 MtrunA17_Chr4g0055761 68.519 54 17 0 7 60 145 198 1.27e-18 82.4
Msa1116250 MtrunA17_Chr1g0184081 70.588 51 15 0 7 57 21 71 3.33e-18 78.6
Msa1116250 MtrunA17_Chr7g0261151 70.588 51 15 0 7 57 20 70 4.33e-18 78.2
Msa1116250 MtrunA17_Chr4g0055801 63.793 58 21 0 3 60 150 207 4.62e-18 81.6
Msa1116250 MtrunA17_Chr4g0055781 62.069 58 22 0 3 60 98 155 4.94e-18 80.5
Msa1116250 MtrunA17_Chr7g0221501 64.286 56 19 1 3 58 47 101 5.55e-18 79.0
Msa1116250 MtrunA17_Chr7g0261101 54.795 73 30 1 1 73 14 83 5.97e-18 77.8
Msa1116250 MtrunA17_Chr1g0186671 68.627 51 16 0 7 57 19 69 6.58e-18 77.4
Msa1116250 MtrunA17_Chr1g0170531 66.667 54 18 0 7 60 89 142 9.34e-18 79.3
Msa1116250 MtrunA17_Chr7g0250721 56.522 69 29 1 7 74 61 129 1.38e-17 78.6
Msa1116250 MtrunA17_Chr1g0186731 66.000 50 17 0 7 56 21 70 4.39e-17 75.5
Msa1116250 MtrunA17_Chr7g0221471 62.500 56 20 1 3 58 47 101 4.93e-17 76.3
Msa1116250 MtrunA17_Chr7g0250731 67.308 52 17 0 7 58 61 112 8.48e-17 76.3
Msa1116250 MtrunA17_Chr7g0261201 49.495 99 35 1 3 86 94 192 1.92e-16 75.9
Msa1116250 MtrunA17_Chr1g0186741 48.246 114 45 1 3 102 69 182 2.68e-16 75.1
Msa1116250 MtrunA17_Chr7g0250711 63.462 52 19 0 7 58 60 111 5.14e-16 74.3
Msa1116250 MtrunA17_Chr8g0335321 61.538 52 20 0 7 58 96 147 5.70e-16 73.9
Msa1116250 MtrunA17_Chr2g0282621 63.158 57 20 1 2 58 10 65 5.80e-16 73.2
Msa1116250 MtrunA17_Chr6g0461271 48.101 79 36 3 4 81 30 104 8.28e-16 75.1
Msa1116250 MtrunA17_Chr1g0186681 64.706 51 17 1 7 56 19 69 2.14e-15 70.5
Msa1116250 MtrunA17_Chr8g0367911 67.308 52 16 1 7 58 44 94 3.64e-15 73.2
Msa1116250 MtrunA17_Chr1g0183931 51.020 98 33 1 4 86 98 195 3.82e-15 72.4
Msa1116250 MtrunA17_Chr8g0378811 38.947 95 57 1 1 95 49 142 4.57e-15 72.8
Msa1116250 MtrunA17_Chr4g0062551 47.143 70 36 1 3 72 49 117 4.80e-15 70.1
Msa1116250 MtrunA17_Chr7g0252381 65.385 52 17 1 7 58 42 92 4.93e-15 72.8
Msa1116250 MtrunA17_Chr1g0167781 54.945 91 27 2 6 82 81 171 5.16e-15 71.6
Msa1116250 MtrunA17_Chr2g0316931 67.308 52 16 1 7 58 31 81 1.23e-14 70.5
Msa1116250 MtrunA17_Chr7g0253424 55.357 56 24 1 2 57 34 88 1.32e-14 71.2
Msa1116250 MtrunA17_Chr4g0066931 59.615 52 20 1 7 58 53 103 1.38e-14 72.0
Msa1116250 MtrunA17_Chr1g0170471 68.085 47 15 0 14 60 90 136 1.55e-14 69.3
Msa1116250 MtrunA17_Chr4g0062161 47.143 70 36 1 3 72 49 117 2.72e-14 69.3
Msa1116250 MtrunA17_Chr7g0261171 49.107 112 40 4 3 100 81 189 3.03e-14 69.7
Msa1116250 MtrunA17_Chr4g0044871 43.182 88 44 3 7 90 96 181 4.60e-14 69.3
Msa1116250 MtrunA17_Chr7g0217991 58.824 51 20 1 7 57 42 91 6.28e-14 70.5
Msa1116250 MtrunA17_Chr4g0044881 40.777 103 54 3 3 100 110 210 6.29e-14 68.9
Msa1116250 MtrunA17_Chr8g0383591 61.818 55 20 1 4 58 142 195 7.65e-14 69.7
Msa1116250 MtrunA17_Chr6g0453661 58.824 51 20 1 7 57 38 87 8.09e-14 70.1
Msa1116250 MtrunA17_Chr2g0282651 58.929 56 22 1 3 58 66 120 1.04e-13 68.6
Msa1116250 MtrunA17_Chr2g0297331 60.784 51 20 0 7 57 14 64 1.09e-13 66.2
Msa1116250 MtrunA17_Chr5g0396911 61.111 54 20 1 7 60 112 164 1.92e-13 68.6
Msa1116250 MtrunA17_Chr5g0438831 63.462 52 18 1 7 58 46 96 1.97e-13 68.2
Msa1116250 MtrunA17_Chr5g0432821 37.615 109 62 4 3 110 120 223 2.11e-13 68.2
Msa1116250 MtrunA17_Chr4g0044911 63.462 52 18 1 7 58 96 146 2.28e-13 67.4
Msa1116250 MtrunA17_Chr5g0412641 65.385 52 17 1 7 58 46 96 2.89e-13 68.6
Msa1116250 MtrunA17_Chr4g0044901 63.462 52 18 1 7 58 96 146 3.26e-13 67.0
Msa1116250 MtrunA17_Chr2g0286161 55.769 52 22 1 7 58 50 100 3.38e-13 67.8
Msa1116250 MtrunA17_Chr8g0344961 58.929 56 22 1 3 58 120 174 3.50e-13 68.2
Msa1116250 MtrunA17_Chr5g0438801 63.462 52 18 1 7 58 51 101 3.87e-13 67.4
Msa1116250 MtrunA17_Chr2g0334031 58.929 56 22 1 3 58 113 167 3.88e-13 68.2
Msa1116250 MtrunA17_Chr1g0195151 60.000 55 21 1 4 58 74 127 4.02e-13 67.4
Msa1116250 MtrunA17_Chr7g0261181 61.404 57 22 0 2 58 8 64 4.99e-13 64.3
Msa1116250 MtrunA17_Chr2g0295421 58.929 56 22 1 3 58 92 146 5.32e-13 66.6
Msa1116250 MtrunA17_Chr3g0099871 58.929 56 22 1 3 58 23 77 5.68e-13 66.2
Msa1116250 MtrunA17_Chr3g0126321 53.333 60 27 1 1 60 107 165 6.08e-13 67.4
Msa1116250 MtrunA17_Chr4g0042761 47.222 72 37 1 7 78 48 118 1.01e-12 66.6
Msa1116250 MtrunA17_Chr1g0183961 65.385 52 18 0 7 58 27 78 2.44e-12 62.8
Msa1116250 MtrunA17_Chr4g0023411 52.308 65 27 2 2 66 60 120 4.97e-12 63.2
Msa1116250 MtrunA17_Chr8g0375031 56.364 55 23 1 4 58 122 175 6.54e-12 63.2
Msa1116250 MtrunA17_Chr1g0196781 52.542 59 24 2 7 65 152 206 7.13e-12 63.9
Msa1116250 MtrunA17_Chr2g0324131 62.000 50 18 1 7 56 218 266 9.29e-12 64.3
Msa1116250 MtrunA17_Chr8g0350701 54.000 50 22 1 7 56 27 75 1.26e-11 63.2
Msa1116250 MtrunA17_Chr5g0437371 54.386 57 25 1 2 58 61 116 2.12e-11 62.8
Msa1116250 MtrunA17_Chr1g0184041 59.649 57 11 2 70 125 29 74 3.05e-11 60.8
Msa1116250 MtrunA17_Chr5g0425561 60.000 50 19 1 7 56 173 221 4.41e-11 62.0
Msa1116250 MtrunA17_Chr3g0115631 60.000 50 19 1 7 56 150 198 5.65e-11 61.6
Msa1116250 MtrunA17_Chr2g0323171 46.575 73 38 1 2 74 60 131 8.85e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1116250 AT3G23240.1 52.885 104 31 2 6 94 81 181 2.48e-25 99.8
Msa1116250 AT2G31230.1 53.191 94 31 2 1 81 80 173 1.72e-22 92.8
Msa1116250 AT4G17500.1 70.370 54 16 0 7 60 148 201 6.56e-19 83.6
Msa1116250 AT5G43410.1 56.716 67 26 1 3 66 11 77 7.16e-19 80.1
Msa1116250 AT5G47220.1 70.370 54 16 0 7 60 117 170 1.40e-18 82.4
Msa1116250 AT5G47230.1 66.071 56 19 0 3 58 152 207 1.66e-18 83.2
Msa1116250 AT2G44840.1 38.393 112 66 1 7 115 92 203 5.32e-18 80.5
Msa1116250 AT5G51190.1 63.158 57 21 0 2 58 67 123 5.67e-18 80.1
Msa1116250 AT4G17490.1 62.712 59 22 0 3 61 133 191 1.76e-17 80.1
Msa1116250 AT4G18450.1 60.000 60 24 0 7 66 110 169 2.23e-17 80.1
Msa1116250 AT3G23230.1 58.182 55 23 0 2 56 15 69 2.31e-16 73.9
Msa1116250 AT5G61600.1 61.111 54 21 0 7 60 88 141 3.34e-16 75.9
Msa1116250 AT2G33710.1 66.038 53 17 1 6 58 69 120 1.08e-15 73.9
Msa1116250 AT5G07580.1 65.385 52 18 0 7 58 110 161 1.44e-15 73.2
Msa1116250 AT5G13910.1 50.704 71 31 2 7 77 20 86 1.58e-15 73.2
Msa1116250 AT2G33710.2 66.038 53 17 1 6 58 69 120 1.65e-15 73.6
Msa1116250 AT5G19790.1 59.259 54 21 1 4 57 19 71 4.04e-15 72.8
Msa1116250 AT1G28360.1 67.308 52 16 1 7 58 12 62 4.91e-15 71.6
Msa1116250 AT1G06160.1 56.180 89 26 2 6 81 81 169 5.57e-15 72.4
Msa1116250 AT3G16770.1 62.500 56 20 1 3 58 75 129 8.10e-15 72.0
Msa1116250 AT5G18560.1 61.538 52 19 1 7 58 55 105 8.51e-15 73.2
Msa1116250 AT1G28160.1 57.377 61 22 2 7 67 39 95 1.70e-14 71.2
Msa1116250 AT5G13330.1 61.538 52 19 1 7 58 39 89 3.50e-14 69.7
Msa1116250 AT5G44210.1 60.345 58 22 1 1 58 27 83 5.01e-14 68.9
Msa1116250 AT5G61890.1 63.462 52 18 1 7 58 90 140 5.34e-14 69.7
Msa1116250 AT4G27950.1 46.154 91 42 5 2 92 114 197 6.87e-14 70.5
Msa1116250 AT3G15210.1 65.385 52 17 1 7 58 25 75 8.09e-14 68.9
Msa1116250 AT1G28370.2 63.462 52 18 1 7 58 58 108 1.04e-13 68.2
Msa1116250 AT1G28370.1 63.462 52 18 1 7 58 20 70 1.25e-13 67.0
Msa1116250 AT4G11140.1 64.000 50 17 1 7 56 87 135 1.80e-13 68.9
Msa1116250 AT1G03800.1 61.538 52 19 1 7 58 53 103 2.65e-13 67.8
Msa1116250 AT3G61630.1 58.182 55 22 1 7 61 105 158 2.66e-13 68.6
Msa1116250 AT3G23220.1 59.701 67 24 1 7 70 14 80 3.62e-13 65.1
Msa1116250 AT3G20310.1 60.714 56 21 1 3 58 23 77 3.86e-13 67.4
Msa1116250 AT5G53290.1 54.237 59 26 1 3 61 121 178 6.17e-13 67.8
Msa1116250 AT1G24590.1 65.385 52 17 1 7 58 58 108 6.21e-13 67.4
Msa1116250 AT1G72360.1 57.143 56 23 1 3 58 21 75 6.36e-13 66.2
Msa1116250 AT1G50640.1 63.462 52 18 1 7 58 28 78 7.17e-13 66.2
Msa1116250 AT2G22200.1 51.429 70 33 1 4 73 68 136 7.36e-13 66.6
Msa1116250 AT1G12980.1 63.462 52 18 1 7 58 57 107 7.47e-13 67.4
Msa1116250 AT2G47520.1 57.143 56 23 1 3 58 46 100 8.43e-13 65.1
Msa1116250 AT1G12890.1 56.364 55 23 1 3 57 17 70 1.26e-12 65.5
Msa1116250 AT1G72360.3 57.143 56 23 1 3 58 70 124 1.73e-12 65.9
Msa1116250 AT1G72360.2 57.143 56 23 1 3 58 72 126 1.74e-12 65.9
Msa1116250 AT1G04370.1 66.667 54 18 0 3 56 16 69 1.05e-11 61.2
Msa1116250 AT1G22190.1 43.820 89 36 4 7 95 83 157 1.94e-11 62.8
Msa1116250 AT1G36060.1 54.839 62 24 2 7 68 143 200 2.94e-11 62.8
Msa1116250 AT1G22985.1 56.364 55 22 1 4 56 72 126 3.33e-11 60.5
Msa1116250 AT4G31060.1 53.704 54 24 1 7 60 27 79 3.68e-11 60.8
Msa1116250 AT4G23750.2 53.704 54 24 1 7 60 122 174 5.50e-11 62.0
Msa1116250 AT4G23750.1 53.704 54 24 1 7 60 122 174 5.50e-11 62.0
Msa1116250 AT1G78080.1 60.000 50 19 1 7 56 152 200 6.81e-11 61.6

Find 34 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCTCATCATACCGGATTT+TGG 0.172853 7_3:+63869286 Msa1116250:CDS
GACTTCAACATCAATTGTTT+TGG 0.284110 7_3:-63870926 None:intergenic
TGTGACTATTTGTCGTTTCA+TGG 0.289329 7_3:-63869344 None:intergenic
CTCTCCTTGAGTGCAAGTTC+AGG 0.358098 7_3:-63864950 None:intergenic
GTCGTTTCATGGAGCGAATA+AGG 0.360177 7_3:-63869333 None:intergenic
TTAAGCTAACGATCATCTTA+TGG 0.371974 7_3:+63869266 Msa1116250:CDS
AATCAAAAGTCTTCATATAT+AGG 0.378865 7_3:+63864703 Msa1116250:CDS
TAGTGTTGAGGATGCTGCTT+TGG 0.421410 7_3:+63864813 Msa1116250:CDS
GCTAGCAATGAGTTTCTGTA+AGG 0.438556 7_3:-63869461 None:intergenic
CAAGAAGAGGAAGAAGGGTT+TGG 0.446404 7_3:+63864776 Msa1116250:CDS
TTCACCTGAACTTGCACTCA+AGG 0.465842 7_3:+63864946 Msa1116250:CDS
TAAGGAGTTCGTCCAAAATC+CGG 0.471885 7_3:-63869298 None:intergenic
ATAAGGTTGTTATAAACATA+AGG 0.476829 7_3:-63869316 None:intergenic
GAGAGATATATGATAGAGAA+TGG 0.482195 7_3:+63869430 Msa1116250:CDS
CATGGAGGTTAAATAGCTAC+TGG 0.492701 7_3:+63869365 Msa1116250:CDS
CATCTTATGGCTCATCATAC+CGG 0.498653 7_3:+63869279 Msa1116250:CDS
ATCAGAGACACAACAAGAAG+AGG 0.520617 7_3:+63864763 Msa1116250:CDS
AGAGGAAGAAGGGTTTGGCT+TGG 0.531425 7_3:+63864781 Msa1116250:CDS
ACACAACAAGAAGAGGAAGA+AGG 0.533196 7_3:+63864770 Msa1116250:CDS
CACAACAAGAAGAGGAAGAA+GGG 0.536520 7_3:+63864771 Msa1116250:CDS
GTCATCATCATCTGAAGCAA+AGG 0.540729 7_3:+63870946 Msa1116250:CDS
TGAGAAATCAATCATATCAA+AGG 0.551277 7_3:-63870870 None:intergenic
AGATTCAATATGATTGCAGA+GGG 0.557172 7_3:+63864920 Msa1116250:CDS
AATATGCAATATTGTTTGTG+TGG 0.574428 7_3:+63870839 Msa1116250:CDS
ACAGAAACTCATTGCTAGCA+AGG 0.589154 7_3:+63869465 Msa1116250:CDS
TGGAACATTTGATAGTGTTG+AGG 0.606632 7_3:+63864801 Msa1116250:CDS
ATGATCGTTAGCTTAATGTA+CGG 0.607680 7_3:-63869259 None:intergenic
CAAAGAAAGATGTTATCCAA+AGG 0.625682 7_3:+63864983 Msa1116250:CDS
GAGATTCAATATGATTGCAG+AGG 0.637711 7_3:+63864919 Msa1116250:CDS
GGGAAACAAGATCAATCAGA+GGG 0.639790 7_3:+63865022 Msa1116250:CDS
AGGGAAACAAGATCAATCAG+AGG 0.654836 7_3:+63865021 Msa1116250:CDS
TGAAACGACAAATAGTCACA+TGG 0.707197 7_3:+63869347 Msa1116250:CDS
GATTCAATATGATTGCAGAG+GGG 0.735956 7_3:+63864921 Msa1116250:CDS
AACGACAAATAGTCACATGG+AGG 0.755899 7_3:+63869350 Msa1116250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAACAAAAGA+AGG + chr7_3:63866032-63866051 Msa1116250:intron 10.0%
!! AAAAAAAAAAAACAAAAGAA+GGG + chr7_3:63866033-63866052 Msa1116250:intron 10.0%
!! AATAATCTCAATTAAAAATT+TGG - chr7_3:63869092-63869111 None:intergenic 10.0%
!!! AATTTTTAATTGAGATTATT+AGG + chr7_3:63869092-63869111 Msa1116250:intron 10.0%
!!! ATTTTTAATTGAGATTATTA+GGG + chr7_3:63869093-63869112 Msa1116250:intron 10.0%
!!! TTATTTTAAAACCAATATTA+AGG + chr7_3:63869186-63869205 Msa1116250:intron 10.0%
!! TAATAGTAAAGAAATATTAA+AGG + chr7_3:63869681-63869700 Msa1116250:intron 10.0%
!! AAAAAAAAAAACAAAAGAAG+GGG + chr7_3:63866034-63866053 Msa1116250:intron 15.0%
!!! CTTTAACTTATATGTTATTA+CGG - chr7_3:63866993-63867012 None:intergenic 15.0%
!!! TTTTACTCGTATATTAATAA+GGG - chr7_3:63867048-63867067 None:intergenic 15.0%
!!! TTTTTACTCGTATATTAATA+AGG - chr7_3:63867049-63867068 None:intergenic 15.0%
!! AAAAAAAAAAAAAATTGGTG+TGG + chr7_3:63867249-63867268 Msa1116250:intron 15.0%
!! ATATAATTCATAAATTGCTT+TGG - chr7_3:63867614-63867633 None:intergenic 15.0%
!! AAGCAATTTATGAATTATAT+TGG + chr7_3:63867614-63867633 Msa1116250:intron 15.0%
!! TTTCACAAAATTTAAGAAAA+AGG - chr7_3:63867901-63867920 None:intergenic 15.0%
!!! TCATTCTTTATTTATTTCAT+TGG + chr7_3:63868321-63868340 Msa1116250:intron 15.0%
!!! GTTTTAAAATAACACAAAAA+AGG - chr7_3:63869178-63869197 None:intergenic 15.0%
!! TAACTTAAGAAGAATTATAT+AGG + chr7_3:63869517-63869536 Msa1116250:intron 15.0%
!! AACTTAAGAAGAATTATATA+GGG + chr7_3:63869518-63869537 Msa1116250:intron 15.0%
!!! AATATTAAAGGTAAAGTTTT+TGG + chr7_3:63869693-63869712 Msa1116250:intron 15.0%
!! TAAAGTAATAAAACAACAAT+CGG - chr7_3:63870737-63870756 None:intergenic 15.0%
!! AATCAAAAGTCTTCATATAT+AGG + chr7_3:63864703-63864722 Msa1116250:CDS 20.0%
!!! ATCCATTGTAATTTGTATTT+AGG + chr7_3:63865216-63865235 Msa1116250:intron 20.0%
!!! TCCATTGTAATTTGTATTTA+GGG + chr7_3:63865217-63865236 Msa1116250:intron 20.0%
!! TTGTATTTAGGGATTAAAAT+AGG + chr7_3:63865228-63865247 Msa1116250:intron 20.0%
!! AAAAAAAAAATATTGCTGAC+AGG + chr7_3:63865544-63865563 Msa1116250:intron 20.0%
!! ACAAAGTTAAATATCCAAAA+TGG - chr7_3:63865752-63865771 None:intergenic 20.0%
!!! AGGATTGCTTTTTTTTTTTT+CGG - chr7_3:63865967-63865986 None:intergenic 20.0%
!! AAAAAAAAAACAAAAGAAGG+GGG + chr7_3:63866035-63866054 Msa1116250:intron 20.0%
!!! ATTTCATTTTTGATCAATTG+AGG + chr7_3:63866350-63866369 Msa1116250:intron 20.0%
!!! TTTCAGGAATTTTTTTGTTT+TGG + chr7_3:63866381-63866400 Msa1116250:intron 20.0%
!!! ATATTAGGGTTTGATATTTT+GGG + chr7_3:63866445-63866464 Msa1116250:intron 20.0%
!! TTTACTCGTATATTAATAAG+GGG - chr7_3:63867047-63867066 None:intergenic 20.0%
!! TTACATGTTAAAATTGTTGT+AGG + chr7_3:63867310-63867329 Msa1116250:intron 20.0%
!! TTCTCATTGTATACAATATT+AGG - chr7_3:63867766-63867785 None:intergenic 20.0%
!! CATATACAGAATTCATATTA+AGG - chr7_3:63868018-63868037 None:intergenic 20.0%
!! ATGTTGTGAAATAATAACTA+TGG + chr7_3:63868035-63868054 Msa1116250:intron 20.0%
!! ATATTCAAAGAGGTAAATTA+AGG - chr7_3:63868784-63868803 None:intergenic 20.0%
!! GTTAAAAACTACCTTAATAT+TGG - chr7_3:63869200-63869219 None:intergenic 20.0%
!! ATAAGGTTGTTATAAACATA+AGG - chr7_3:63869319-63869338 None:intergenic 20.0%
!! TCTAAAAATTATTTGTCCTT+GGG - chr7_3:63869963-63869982 None:intergenic 20.0%
!! GAAATTGTAATTTATGAAAG+AGG - chr7_3:63870063-63870082 None:intergenic 20.0%
!!! TGCTTTATTTTTTACACCTT+TGG - chr7_3:63865002-63865021 None:intergenic 25.0%
!! AAAGGTGTAAAAAATAAAGC+AGG + chr7_3:63865001-63865020 Msa1116250:CDS 25.0%
! AAGGTGTAAAAAATAAAGCA+GGG + chr7_3:63865002-63865021 Msa1116250:CDS 25.0%
! TCCCTAAATACAAATTACAA+TGG - chr7_3:63865221-63865240 None:intergenic 25.0%
! AGATTCCTTCCAAAAAAAAA+AGG + chr7_3:63865253-63865272 Msa1116250:intron 25.0%
! GATTCCTTCCAAAAAAAAAA+GGG + chr7_3:63865254-63865273 Msa1116250:intron 25.0%
!!! TTTCAGTTAGATTTTCAAGT+TGG + chr7_3:63865340-63865359 Msa1116250:intron 25.0%
!!! GATTAATGGACTAAAAAATC+AGG - chr7_3:63865409-63865428 None:intergenic 25.0%
! TTGTTGGATTAACAGATTAA+TGG - chr7_3:63865423-63865442 None:intergenic 25.0%
! GTTTACAACTATTATCTTGT+TGG - chr7_3:63865439-63865458 None:intergenic 25.0%
!!! GAATTTTGAGTTTGAATTGT+GGG - chr7_3:63865506-63865525 None:intergenic 25.0%
!!! TGAATTTTGAGTTTGAATTG+TGG - chr7_3:63865507-63865526 None:intergenic 25.0%
!! TCTAAAATAGTTGTGTTTGA+TGG - chr7_3:63865778-63865797 None:intergenic 25.0%
!! ATGTTGTATAACTTCTGTTT+TGG + chr7_3:63865802-63865821 Msa1116250:intron 25.0%
! TAACATATCAAATCCTAGAT+AGG - chr7_3:63865844-63865863 None:intergenic 25.0%
!! ATCTAGGATTTGATATGTTA+TGG + chr7_3:63865844-63865863 Msa1116250:intron 25.0%
! ATTTGATATGTTATGGATCA+TGG + chr7_3:63865851-63865870 Msa1116250:intron 25.0%
! TTATATTAGCATGCATGTTT+AGG + chr7_3:63866304-63866323 Msa1116250:intron 25.0%
! AAAATTGTTTCCGTGATATT+AGG + chr7_3:63866430-63866449 Msa1116250:intron 25.0%
! AAATTGTTTCCGTGATATTA+GGG + chr7_3:63866431-63866450 Msa1116250:intron 25.0%
! AATATCAAACCCTAATATCA+CGG - chr7_3:63866443-63866462 None:intergenic 25.0%
!! GATATTAGGGTTTGATATTT+TGG + chr7_3:63866444-63866463 Msa1116250:intron 25.0%
! GGAAGATTAAGTTAAAATTG+AGG + chr7_3:63866466-63866485 Msa1116250:intron 25.0%
! TTACTCGTATATTAATAAGG+GGG - chr7_3:63867046-63867065 None:intergenic 25.0%
!!! ACAATTTTAACATGTAACCA+GGG - chr7_3:63867307-63867326 None:intergenic 25.0%
!!! AACAATTTTAACATGTAACC+AGG - chr7_3:63867308-63867327 None:intergenic 25.0%
! ACAGAAATTGAATTGTTTAG+AGG + chr7_3:63867384-63867403 Msa1116250:intron 25.0%
!!! TTAAGCTGTTTTGAACAAAA+TGG + chr7_3:63867421-63867440 Msa1116250:intron 25.0%
! ATTTAAGAAAAAGGTTCAGT+TGG - chr7_3:63867892-63867911 None:intergenic 25.0%
!!! CATCTTTTTTATGAATGTCA+AGG + chr7_3:63867951-63867970 Msa1116250:intron 25.0%
! TTAAGATAAAATGTTGTTGC+TGG + chr7_3:63867976-63867995 Msa1116250:intron 25.0%
! TTGTGAAATAATAACTATGG+TGG + chr7_3:63868038-63868057 Msa1116250:intron 25.0%
! AATGCAATACATTACATACA+TGG - chr7_3:63868143-63868162 None:intergenic 25.0%
! AACGAAATTCTAACTTCATA+GGG - chr7_3:63868269-63868288 None:intergenic 25.0%
! TGTTCGAATAAATAAAACAC+AGG - chr7_3:63868567-63868586 None:intergenic 25.0%
! ACAAACTACTATGTTGTATT+AGG - chr7_3:63868664-63868683 None:intergenic 25.0%
!! TCATAAAAGCATATTCAAAG+AGG - chr7_3:63868794-63868813 None:intergenic 25.0%
! AAAAAAACTACCATAGAAGA+AGG - chr7_3:63868818-63868837 None:intergenic 25.0%
! ATTAATCTCAAGTTCAAATC+AGG - chr7_3:63869051-63869070 None:intergenic 25.0%
!! TGCAACATTTCTTTTCTTAT+GGG - chr7_3:63869148-63869167 None:intergenic 25.0%
!! TTGCAACATTTCTTTTCTTA+TGG - chr7_3:63869149-63869168 None:intergenic 25.0%
! AAGAAAAGAAATGTTGCAAA+TGG + chr7_3:63869150-63869169 Msa1116250:intron 25.0%
! TTCTTTACTATTAGTACCTA+TGG - chr7_3:63869674-63869693 None:intergenic 25.0%
!! TGATGTCTTTGTATTTTACT+TGG - chr7_3:63869856-63869875 None:intergenic 25.0%
! ATACAAAGACATCAAAGATT+TGG + chr7_3:63869862-63869881 Msa1116250:intron 25.0%
! GTCTAAAAATTATTTGTCCT+TGG - chr7_3:63869964-63869983 None:intergenic 25.0%
! TGAAATATGTGTTTCTTTGT+TGG + chr7_3:63870018-63870037 Msa1116250:intron 25.0%
!!! ATCTTTTTCGAGAAATTAGA+AGG + chr7_3:63870136-63870155 Msa1116250:intron 25.0%
! ATGAAGCAAGAAACAATAAT+CGG - chr7_3:63870778-63870797 None:intergenic 25.0%
! TTCATTGTCAAAAATTCAGA+TGG + chr7_3:63870793-63870812 Msa1116250:intron 25.0%
! AATATGCAATATTGTTTGTG+TGG + chr7_3:63870839-63870858 Msa1116250:CDS 25.0%
! TGAGAAATCAATCATATCAA+AGG - chr7_3:63870873-63870892 None:intergenic 25.0%
! TGCTCAATTTTTCTGTTCAA+AGG + chr7_3:63864878-63864897 Msa1116250:intron 30.0%
! GCTCAATTTTTCTGTTCAAA+GGG + chr7_3:63864879-63864898 Msa1116250:intron 30.0%
AGATTCAATATGATTGCAGA+GGG + chr7_3:63864920-63864939 Msa1116250:CDS 30.0%
CAAAGAAAGATGTTATCCAA+AGG + chr7_3:63864983-63865002 Msa1116250:CDS 30.0%
!!! CAATCTCACCCTTTTTTTTT+TGG - chr7_3:63865265-63865284 None:intergenic 30.0%
AAAAAAATATTGCTGACAGG+AGG + chr7_3:63865547-63865566 Msa1116250:intron 30.0%
!! TGACAAGTTGATCTTTGATT+TGG + chr7_3:63865635-63865654 Msa1116250:intron 30.0%
!!! TTCTGTTTTGGTTTCGTTTA+TGG + chr7_3:63865814-63865833 Msa1116250:intron 30.0%
GAGAAAGAAGAAAGAAGAAT+GGG + chr7_3:63866143-63866162 Msa1116250:intron 30.0%
TTGATGAATGAAGAACAAAC+AGG - chr7_3:63866208-63866227 None:intergenic 30.0%
GTTTGTTCTTCATTCATCAA+AGG + chr7_3:63866208-63866227 Msa1116250:intron 30.0%
! ATATCACGGAAACAATTTTC+TGG - chr7_3:63866429-63866448 None:intergenic 30.0%
! AATCACTTATGGTAGCTTTT+GGG - chr7_3:63866634-63866653 None:intergenic 30.0%
! TAATCACTTATGGTAGCTTT+TGG - chr7_3:63866635-63866654 None:intergenic 30.0%
AAGCTACCATAAGTGATTAT+TGG + chr7_3:63866636-63866655 Msa1116250:intron 30.0%
AGCTACCATAAGTGATTATT+GGG + chr7_3:63866637-63866656 Msa1116250:intron 30.0%
TAACACCCAATAATCACTTA+TGG - chr7_3:63866645-63866664 None:intergenic 30.0%
TGTTAAAATTGTTGTAGGAG+TGG + chr7_3:63867315-63867334 Msa1116250:intron 30.0%
ATTCTGGTGTAATTCTCTAT+AGG + chr7_3:63867652-63867671 Msa1116250:intron 30.0%
CATATGCAACAAATACAAAG+CGG - chr7_3:63867698-63867717 None:intergenic 30.0%
! TCTCTCTTCTTTGTTTAGTT+TGG + chr7_3:63867787-63867806 Msa1116250:intron 30.0%
! GCATTAGGTATTTTTCTTCA+AGG + chr7_3:63867864-63867883 Msa1116250:intron 30.0%
! TTTGAAGCAGATAAGTTTGA+TGG + chr7_3:63868219-63868238 Msa1116250:intron 30.0%
TTGAAGCAGATAAGTTTGAT+GGG + chr7_3:63868220-63868239 Msa1116250:intron 30.0%
CAACGAAATTCTAACTTCAT+AGG - chr7_3:63868270-63868289 None:intergenic 30.0%
GTAGCATATTTGATTACAAC+AGG + chr7_3:63868360-63868379 Msa1116250:intron 30.0%
CCAGCATTATTTAAATTGCT+GGG - chr7_3:63868452-63868471 None:intergenic 30.0%
ACCAGCATTATTTAAATTGC+TGG - chr7_3:63868453-63868472 None:intergenic 30.0%
GCAATTTAAATAATGCTGGT+CGG + chr7_3:63868453-63868472 Msa1116250:intron 30.0%
CAATTTAAATAATGCTGGTC+GGG + chr7_3:63868454-63868473 Msa1116250:intron 30.0%
AATTTAAATAATGCTGGTCG+GGG + chr7_3:63868455-63868474 Msa1116250:intron 30.0%
ATAAAACACAGGTAAAGTGA+GGG - chr7_3:63868556-63868575 None:intergenic 30.0%
AATAAAACACAGGTAAAGTG+AGG - chr7_3:63868557-63868576 None:intergenic 30.0%
! TATCCATAAAAGCATATCAG+TGG - chr7_3:63868609-63868628 None:intergenic 30.0%
! TGTTGTATTAGGTGTTTTCA+AGG - chr7_3:63868653-63868672 None:intergenic 30.0%
CTAAGGAATTGATCTCATAT+TGG + chr7_3:63868748-63868767 Msa1116250:intron 30.0%
! CTTTTATGAACCTTCTTCTA+TGG + chr7_3:63868805-63868824 Msa1116250:intron 30.0%
! TTTTTGTCTTCCCTCAAATA+TGG + chr7_3:63868833-63868852 Msa1116250:intron 30.0%
AAGGTTCTTTCCATATTTGA+GGG - chr7_3:63868846-63868865 None:intergenic 30.0%
! CAGGTACATCATTGTAATTT+TGG - chr7_3:63868945-63868964 None:intergenic 30.0%
CAAAATTACAATGATGTACC+TGG + chr7_3:63868943-63868962 Msa1116250:intron 30.0%
TCTTGGTGAAAAAATGAACT+TGG - chr7_3:63869021-63869040 None:intergenic 30.0%
! GCAACATTTCTTTTCTTATG+GGG - chr7_3:63869147-63869166 None:intergenic 30.0%
! ATGATCGTTAGCTTAATGTA+CGG - chr7_3:63869262-63869281 None:intergenic 30.0%
TTAAGCTAACGATCATCTTA+TGG + chr7_3:63869266-63869285 Msa1116250:CDS 30.0%
GAGAGATATATGATAGAGAA+TGG + chr7_3:63869430-63869449 Msa1116250:CDS 30.0%
TGATAACTCTATATCTGCAT+TGG + chr7_3:63869558-63869577 Msa1116250:intron 30.0%
! ACATTTAGAGTGCTTAATGA+GGG + chr7_3:63869796-63869815 Msa1116250:intron 30.0%
TACATAGCAGAAATTCTTTG+AGG + chr7_3:63870091-63870110 Msa1116250:intron 30.0%
TCTGAAGAAGTTAAAATCTC+TGG - chr7_3:63870242-63870261 None:intergenic 30.0%
! TTTAACTTCTTCAGATTCAG+TGG + chr7_3:63870247-63870266 Msa1116250:intron 30.0%
CTGATCATATGGTGATTAAT+CGG - chr7_3:63870537-63870556 None:intergenic 30.0%
CTTTATTATGCTATGTACGT+CGG - chr7_3:63870563-63870582 None:intergenic 30.0%
TGTCAAAAATTCAGATGGTT+AGG + chr7_3:63870798-63870817 Msa1116250:intron 30.0%
!!! CAATTGTTTTGGCTCATTTT+CGG - chr7_3:63870918-63870937 None:intergenic 30.0%
! GACTTCAACATCAATTGTTT+TGG - chr7_3:63870929-63870948 None:intergenic 30.0%
!! TGGAACATTTGATAGTGTTG+AGG + chr7_3:63864801-63864820 Msa1116250:CDS 35.0%
! CAAGCTGCATTTTTAATGAG+AGG + chr7_3:63864844-63864863 Msa1116250:CDS 35.0%
! TTTTCTGTTCAAAGGGTCAA+AGG + chr7_3:63864886-63864905 Msa1116250:intron 35.0%
GAGATTCAATATGATTGCAG+AGG + chr7_3:63864919-63864938 Msa1116250:CDS 35.0%
GATTCAATATGATTGCAGAG+GGG + chr7_3:63864921-63864940 Msa1116250:CDS 35.0%
!!! CTCACCCTTTTTTTTTTGGA+AGG - chr7_3:63865261-63865280 None:intergenic 35.0%
ATCCTGATATGCTGATCTAT+AGG - chr7_3:63865298-63865317 None:intergenic 35.0%
AGGAATGCTGAGAAATCTTT+GGG + chr7_3:63865567-63865586 Msa1116250:intron 35.0%
!! TGTCTGACATACATTTTGGT+TGG - chr7_3:63865669-63865688 None:intergenic 35.0%
! GATGTGTCTGACATACATTT+TGG - chr7_3:63865673-63865692 None:intergenic 35.0%
!!! TTTTGGAATTGAAGACGATG+AGG + chr7_3:63865726-63865745 Msa1116250:intron 35.0%
GGAGAAAGAAGAAAGAAGAA+TGG + chr7_3:63866142-63866161 Msa1116250:intron 35.0%
AACAGAAGCTGAAAATCAGA+TGG - chr7_3:63866170-63866189 None:intergenic 35.0%
GAACAAACAGGAAGAAGAAA+AGG - chr7_3:63866196-63866215 None:intergenic 35.0%
TGTTCTTCATTCATCAAAGG+TGG + chr7_3:63866211-63866230 Msa1116250:intron 35.0%
TTCATTCATCAAAGGTGGTA+AGG + chr7_3:63866216-63866235 Msa1116250:intron 35.0%
! AATTGAGGTTGCATGTTTTC+AGG + chr7_3:63866365-63866384 Msa1116250:intron 35.0%
!!! GCATAAGCTGTTATTTTCCT+TGG + chr7_3:63866536-63866555 Msa1116250:intron 35.0%
!! GTTATTTTCCTTGGATTCTG+TGG + chr7_3:63866545-63866564 Msa1116250:intron 35.0%
!! TAGCTTTTGGGGATAACTTA+TGG - chr7_3:63866622-63866641 None:intergenic 35.0%
! ATCACTTATGGTAGCTTTTG+GGG - chr7_3:63866633-63866652 None:intergenic 35.0%
! ATTATTGGGTGTTACATGCA+GGG + chr7_3:63866651-63866670 Msa1116250:intron 35.0%
ATCTGGACTCACAATATTAG+TGG + chr7_3:63866678-63866697 Msa1116250:intron 35.0%
TCTGGACTCACAATATTAGT+GGG + chr7_3:63866679-63866698 Msa1116250:intron 35.0%
! TTTTAACATGTAACCAGGGA+CGG - chr7_3:63867303-63867322 None:intergenic 35.0%
AATTGTTGTAGGAGTGGTTT+AGG + chr7_3:63867321-63867340 Msa1116250:intron 35.0%
!! ATACATGTTTGGTTTGCTTC+TGG + chr7_3:63867352-63867371 Msa1116250:intron 35.0%
TGCTGTGTAAGTGATTCATA+GGG + chr7_3:63867472-63867491 Msa1116250:intron 35.0%
ATAGGGGTGATTATTCATGT+TGG + chr7_3:63867489-63867508 Msa1116250:intron 35.0%
TCAACACATCTCATTATGCA+AGG - chr7_3:63867576-63867595 None:intergenic 35.0%
ACACCAGAATTAACAGTCAA+AGG - chr7_3:63867642-63867661 None:intergenic 35.0%
TTGTTGCATATGTGTCTATG+AGG + chr7_3:63867706-63867725 Msa1116250:intron 35.0%
CGATATGCGATTGACAAAAT+TGG + chr7_3:63868109-63868128 Msa1116250:intron 35.0%
CCCAGCAATTTAAATAATGC+TGG + chr7_3:63868449-63868468 Msa1116250:intron 35.0%
! TCACCACTGATATGCTTTTA+TGG + chr7_3:63868603-63868622 Msa1116250:intron 35.0%
!! CTTAGTTTTTGCACAAGAGT+CGG - chr7_3:63868733-63868752 None:intergenic 35.0%
CAAGGTTCTTTCCATATTTG+AGG - chr7_3:63868847-63868866 None:intergenic 35.0%
CTCAAATATGGAAAGAACCT+TGG + chr7_3:63868845-63868864 Msa1116250:intron 35.0%
AAAGAACCTTGGTATTACCA+CGG + chr7_3:63868856-63868875 Msa1116250:intron 35.0%
TGTGAATTGCCGATGAATTT+GGG - chr7_3:63868974-63868993 None:intergenic 35.0%
ATGTGAATTGCCGATGAATT+TGG - chr7_3:63868975-63868994 None:intergenic 35.0%
TCAAATCAGGTACTCATTCT+TGG - chr7_3:63869038-63869057 None:intergenic 35.0%
! TGTGACTATTTGTCGTTTCA+TGG - chr7_3:63869347-63869366 None:intergenic 35.0%
TGAAACGACAAATAGTCACA+TGG + chr7_3:63869347-63869366 Msa1116250:CDS 35.0%
! GACATTTAGAGTGCTTAATG+AGG + chr7_3:63869795-63869814 Msa1116250:intron 35.0%
CTTAATCCTGTGCAGAAAAA+TGG + chr7_3:63869821-63869840 Msa1116250:intron 35.0%
CAAAGACATCAAAGATTTGG+AGG + chr7_3:63869865-63869884 Msa1116250:intron 35.0%
TGAATGAATCCTTACTTGCT+TGG - chr7_3:63869918-63869937 None:intergenic 35.0%
GATTTCAGTCACAATATGTC+AGG + chr7_3:63869986-63870005 Msa1116250:intron 35.0%
AGAATTTCTGCTATGTATGC+AGG - chr7_3:63870088-63870107 None:intergenic 35.0%
TGTGAGGTCTAAATCTTTCA+AGG - chr7_3:63870203-63870222 None:intergenic 35.0%
CATCTGCAGAAAAATTAGAG+AGG - chr7_3:63870399-63870418 None:intergenic 35.0%
GCAGATGATGATTACATATC+AGG + chr7_3:63870412-63870431 Msa1116250:intron 35.0%
TAGGTGTGAGAAAAAGACCT+AGG + chr7_3:63864722-63864741 Msa1116250:CDS 40.0%
AGGTGTGAGAAAAAGACCTA+GGG + chr7_3:63864723-63864742 Msa1116250:CDS 40.0%
ATCAGAGACACAACAAGAAG+AGG + chr7_3:63864763-63864782 Msa1116250:CDS 40.0%
ACACAACAAGAAGAGGAAGA+AGG + chr7_3:63864770-63864789 Msa1116250:CDS 40.0%
CACAACAAGAAGAGGAAGAA+GGG + chr7_3:63864771-63864790 Msa1116250:CDS 40.0%
AGGGAAACAAGATCAATCAG+AGG + chr7_3:63865021-63865040 Msa1116250:CDS 40.0%
GGGAAACAAGATCAATCAGA+GGG + chr7_3:63865022-63865041 Msa1116250:CDS 40.0%
AGCCTATAGATCAGCATATC+AGG + chr7_3:63865293-63865312 Msa1116250:intron 40.0%
TTGAGTTTGAATTGTGGGTG+AGG - chr7_3:63865501-63865520 None:intergenic 40.0%
GAGGAATGCTGAGAAATCTT+TGG + chr7_3:63865566-63865585 Msa1116250:intron 40.0%
AATGCTGAGAAATCTTTGGG+TGG + chr7_3:63865570-63865589 Msa1116250:intron 40.0%
AGAAATCTTTGGGTGGTGAA+TGG + chr7_3:63865577-63865596 Msa1116250:intron 40.0%
ATAGACCGCAACTTACAAGA+GGG + chr7_3:63865612-63865631 Msa1116250:intron 40.0%
!!! CTGACATACATTTTGGTTGG+TGG - chr7_3:63865666-63865685 None:intergenic 40.0%
CACTACCTTTCGTTGTTTAC+TGG - chr7_3:63865701-63865720 None:intergenic 40.0%
CAGTAAACAACGAAAGGTAG+TGG + chr7_3:63865699-63865718 Msa1116250:intron 40.0%
!! CGAAAGGTAGTGGTTACTTT+TGG + chr7_3:63865709-63865728 Msa1116250:intron 40.0%
CGTTTATGGTAGACCTATCT+AGG + chr7_3:63865828-63865847 Msa1116250:intron 40.0%
AGTTGCTTCAGCATCATCAA+AGG + chr7_3:63866268-63866287 Msa1116250:intron 40.0%
! TCTGTGGTGACTCTGTATTT+TGG + chr7_3:63866561-63866580 Msa1116250:intron 40.0%
! CTGTGGTGACTCTGTATTTT+GGG + chr7_3:63866562-63866581 Msa1116250:intron 40.0%
! GATTATTGGGTGTTACATGC+AGG + chr7_3:63866650-63866669 Msa1116250:intron 40.0%
! TTATTGGGTGTTACATGCAG+GGG + chr7_3:63866652-63866671 Msa1116250:intron 40.0%
CTGGACTCACAATATTAGTG+GGG + chr7_3:63866680-63866699 Msa1116250:intron 40.0%
!!! AGCGTGTTGCACTCTTTTTT+TGG + chr7_3:63866806-63866825 Msa1116250:intron 40.0%
AGGAGCTGTGTATACATGTT+TGG + chr7_3:63867341-63867360 Msa1116250:intron 40.0%
CTGCTGTGTAAGTGATTCAT+AGG + chr7_3:63867471-63867490 Msa1116250:intron 40.0%
GCTGTGTAAGTGATTCATAG+GGG + chr7_3:63867473-63867492 Msa1116250:intron 40.0%
GAGCCTTTGACTGTTAATTC+TGG + chr7_3:63867636-63867655 Msa1116250:intron 40.0%
CATATGTGTCTATGAGGCAA+TGG + chr7_3:63867712-63867731 Msa1116250:intron 40.0%
! CTTTCTAGTCGCATCAACTT+TGG - chr7_3:63867817-63867836 None:intergenic 40.0%
!! CAAAGTTGATGCGACTAGAA+AGG + chr7_3:63867815-63867834 Msa1116250:intron 40.0%
GCATATCGCGTAAAACAACA+GGG - chr7_3:63868097-63868116 None:intergenic 40.0%
! TATTGCATTTTGTCGTTCGC+AGG + chr7_3:63868154-63868173 Msa1116250:intron 40.0%
AAGTTTGATGGGAATACTGC+AGG + chr7_3:63868231-63868250 Msa1116250:intron 40.0%
CATTGGATGTCAGAGAATTG+CGG + chr7_3:63868338-63868357 Msa1116250:intron 40.0%
CGACTCTTGTGCAAAAACTA+AGG + chr7_3:63868731-63868750 Msa1116250:intron 40.0%
CCGTGATTTCACCAAATTCA+CGG - chr7_3:63868885-63868904 None:intergenic 40.0%
! CCGTGAATTTGGTGAAATCA+CGG + chr7_3:63868882-63868901 Msa1116250:intron 40.0%
CTGGATTCTCCCAAATTCAT+CGG + chr7_3:63868962-63868981 Msa1116250:intron 40.0%
TTAGGGCATGAAATTCCTTC+TGG + chr7_3:63869110-63869129 Msa1116250:intron 40.0%
TCATTACCATGTCTGACATC+AGG + chr7_3:63869224-63869243 Msa1116250:intron 40.0%
CATCTTATGGCTCATCATAC+CGG + chr7_3:63869279-63869298 Msa1116250:CDS 40.0%
TAAGGAGTTCGTCCAAAATC+CGG - chr7_3:63869301-63869320 None:intergenic 40.0%
AACGACAAATAGTCACATGG+AGG + chr7_3:63869350-63869369 Msa1116250:CDS 40.0%
CATGGAGGTTAAATAGCTAC+TGG + chr7_3:63869365-63869384 Msa1116250:CDS 40.0%
GCTAGCAATGAGTTTCTGTA+AGG - chr7_3:63869464-63869483 None:intergenic 40.0%
ACAGAAACTCATTGCTAGCA+AGG + chr7_3:63869465-63869484 Msa1116250:CDS 40.0%
TTCTACCTGTCTTAGTCTCA+TGG + chr7_3:63869771-63869790 Msa1116250:intron 40.0%
!! CTTTCTCCATTTTTCTGCAC+AGG - chr7_3:63869830-63869849 None:intergenic 40.0%
ATGTGTTTCTTTGTTGGCCA+AGG + chr7_3:63870024-63870043 Msa1116250:intron 40.0%
TAGAAGGATTCATCACGTGT+AGG + chr7_3:63870152-63870171 Msa1116250:intron 40.0%
CAGATTCAGTGGAATCTGTA+AGG + chr7_3:63870258-63870277 Msa1116250:intron 40.0%
AGTTCTATTGCAACCTGCTT+AGG + chr7_3:63870370-63870389 Msa1116250:intron 40.0%
ATTAGAGAGGTAACCTAAGC+AGG - chr7_3:63870386-63870405 None:intergenic 40.0%
AAGTCGTTGTGCAAGTATCT+TGG - chr7_3:63870638-63870657 None:intergenic 40.0%
! GTCATCATCATCTGAAGCAA+AGG + chr7_3:63870946-63870965 Msa1116250:CDS 40.0%
GGTGTGAGAAAAAGACCTAG+GGG + chr7_3:63864724-63864743 Msa1116250:CDS 45.0%
! TCTGCTGCATATTTTCCCCT+AGG - chr7_3:63864742-63864761 None:intergenic 45.0%
CAAGAAGAGGAAGAAGGGTT+TGG + chr7_3:63864776-63864795 Msa1116250:CDS 45.0%
! TAGTGTTGAGGATGCTGCTT+TGG + chr7_3:63864813-63864832 Msa1116250:CDS 45.0%
TTCACCTGAACTTGCACTCA+AGG + chr7_3:63864946-63864965 Msa1116250:CDS 45.0%
!! AGAGGGATCAAGTGTCACTT+GGG + chr7_3:63865039-63865058 Msa1116250:intron 45.0%
CATAGACCGCAACTTACAAG+AGG + chr7_3:63865611-63865630 Msa1116250:intron 45.0%
TGTCACCCTCTTGTAAGTTG+CGG - chr7_3:63865620-63865639 None:intergenic 45.0%
ATGTATGTCAGACACATCCG+CGG + chr7_3:63865675-63865694 Msa1116250:intron 45.0%
! TGAAGACGATGAGGCCATTT+TGG + chr7_3:63865735-63865754 Msa1116250:intron 45.0%
CATCAAAGGTGGTAAGGTTG+CGG + chr7_3:63866222-63866241 Msa1116250:intron 45.0%
!! GTAAGGTTGCGGTTCTGAAT+AGG + chr7_3:63866233-63866252 Msa1116250:intron 45.0%
TGCTTCAGCATCATCAAAGG+TGG + chr7_3:63866271-63866290 Msa1116250:intron 45.0%
TAGCAGAATACCCGTGCATA+GGG + chr7_3:63866776-63866795 Msa1116250:intron 45.0%
! AGTTGATGCGACTAGAAAGG+CGG + chr7_3:63867818-63867837 Msa1116250:intron 45.0%
! CGACTAGAAAGGCGGTTTTA+CGG + chr7_3:63867826-63867845 Msa1116250:intron 45.0%
! GACTAGAAAGGCGGTTTTAC+GGG + chr7_3:63867827-63867846 Msa1116250:intron 45.0%
GCGCTTAAGCTTCTTGCATT+AGG + chr7_3:63867849-63867868 Msa1116250:intron 45.0%
CGCATATCGCGTAAAACAAC+AGG - chr7_3:63868098-63868117 None:intergenic 45.0%
CGCGTTAGTGATTTGACGTT+CGG + chr7_3:63868190-63868209 Msa1116250:intron 45.0%
TAGTGATTTGACGTTCGGAG+TGG + chr7_3:63868195-63868214 Msa1116250:intron 45.0%
TTAAATAATGCTGGTCGGGG+CGG + chr7_3:63868458-63868477 Msa1116250:intron 45.0%
GTCGGTCTCTATTGCTTGTA+TGG - chr7_3:63868715-63868734 None:intergenic 45.0%
TTTGGTGAAATCACGGACAC+TGG + chr7_3:63868889-63868908 Msa1116250:intron 45.0%
CGATGAATTTGGGAGAATCC+AGG - chr7_3:63868964-63868983 None:intergenic 45.0%
GGGGATAAAGACATTCCAGA+AGG - chr7_3:63869128-63869147 None:intergenic 45.0%
CTGAAACCTGATGTCAGACA+TGG - chr7_3:63869233-63869252 None:intergenic 45.0%
! TGGCTCATCATACCGGATTT+TGG + chr7_3:63869286-63869305 Msa1116250:CDS 45.0%
GTCGTTTCATGGAGCGAATA+AGG - chr7_3:63869336-63869355 None:intergenic 45.0%
! TCCTTTGTCGCTTCTACATC+AGG - chr7_3:63869649-63869668 None:intergenic 45.0%
GAAGCGACAAAGGAAACCAT+AGG + chr7_3:63869655-63869674 Msa1116250:intron 45.0%
TGTCACCATGAGACTAAGAC+AGG - chr7_3:63869779-63869798 None:intergenic 45.0%
TTCCTGCAACCAAGCAAGTA+AGG + chr7_3:63869906-63869925 Msa1116250:intron 45.0%
ATCCTTACTTGCTTGGTTGC+AGG - chr7_3:63869911-63869930 None:intergenic 45.0%
CTGCAAGTAGAAATCTCCCA+AGG + chr7_3:63869944-63869963 Msa1116250:intron 45.0%
!! TGTAGGAGCATTCCCTCATA+AGG + chr7_3:63870169-63870188 Msa1116250:intron 45.0%
! AAGGATGTGCAGCCTTATGA+GGG - chr7_3:63870184-63870203 None:intergenic 45.0%
! TGTATGCAGCAAGAAGTGTG+AGG - chr7_3:63870219-63870238 None:intergenic 45.0%
ATAGCCTCTTCACTTAGGCT+TGG - chr7_3:63870305-63870324 None:intergenic 45.0%
CTTGCATAGCCTCTTCACTT+AGG - chr7_3:63870310-63870329 None:intergenic 45.0%
!! TCCAGCTTTGAACTCCATCA+AGG - chr7_3:63870463-63870482 None:intergenic 45.0%
TGGAGTTCAAAGCTGGAGTA+AGG + chr7_3:63870466-63870485 Msa1116250:intron 45.0%
TACGTCGGAAGCTGATCATA+TGG - chr7_3:63870548-63870567 None:intergenic 45.0%
!! AACTAAAAAAAAAAAAAAAT+TGG + chr7_3:63867244-63867263 Msa1116250:intron 5.0%
AGAGGAAGAAGGGTTTGGCT+TGG + chr7_3:63864781-63864800 Msa1116250:CDS 50.0%
CTCTCCTTGAGTGCAAGTTC+AGG - chr7_3:63864953-63864972 None:intergenic 50.0%
! CAGAGGGATCAAGTGTCACT+TGG + chr7_3:63865038-63865057 Msa1116250:intron 50.0%
CTTTCGTTGTTTACTGGCCG+CGG - chr7_3:63865695-63865714 None:intergenic 50.0%
TTACAAACCCGTGCTTCGCA+CGG - chr7_3:63865992-63866011 None:intergenic 50.0%
AAAGAAGGGGGACGAGAGAT+TGG + chr7_3:63866047-63866066 Msa1116250:intron 50.0%
ATTGGAACGGGAGAGGAAGA+AGG + chr7_3:63866065-63866084 Msa1116250:intron 50.0%
TTGGAACGGGAGAGGAAGAA+GGG + chr7_3:63866066-63866085 Msa1116250:intron 50.0%
AGGAAGAAGGGTGAGAGAAG+AGG + chr7_3:63866078-63866097 Msa1116250:intron 50.0%
GGAAGAAGGGTGAGAGAAGA+GGG + chr7_3:63866079-63866098 Msa1116250:intron 50.0%
AGGGTGAGAGAAGAGGGAAA+CGG + chr7_3:63866085-63866104 Msa1116250:intron 50.0%
AAGAGGGAAACGGGAGAAAG+AGG + chr7_3:63866095-63866114 Msa1116250:intron 50.0%
AGAGGGAAACGGGAGAAAGA+GGG + chr7_3:63866096-63866115 Msa1116250:intron 50.0%
GAAACGGGAGAAAGAGGGAA+CGG + chr7_3:63866101-63866120 Msa1116250:intron 50.0%
AAACGGGAGAAAGAGGGAAC+GGG + chr7_3:63866102-63866121 Msa1116250:intron 50.0%
AGGGAACGGGAGAAAGAAGA+GGG + chr7_3:63866115-63866134 Msa1116250:intron 50.0%
ACGGGAGAAAGAAGAGGGAA+CGG + chr7_3:63866120-63866139 Msa1116250:intron 50.0%
CAGAGTCACCACAGAATCCA+AGG - chr7_3:63866556-63866575 None:intergenic 50.0%
CTAGCAGAATACCCGTGCAT+AGG + chr7_3:63866775-63866794 Msa1116250:intron 50.0%
AGAATACCCGTGCATAGGGA+CGG + chr7_3:63866780-63866799 Msa1116250:intron 50.0%
! CATGTAACCAGGGACGGATT+TGG - chr7_3:63867297-63867316 None:intergenic 50.0%
TGGCGCTATAACGTGCTCAT+CGG + chr7_3:63868058-63868077 Msa1116250:intron 50.0%
! TGCATTTTGTCGTTCGCAGG+AGG + chr7_3:63868157-63868176 Msa1116250:intron 50.0%
CACAGGTAAAGTGAGGGCTT+TGG - chr7_3:63868550-63868569 None:intergenic 50.0%
TACCACGGACACCGTGAATT+TGG + chr7_3:63868871-63868890 Msa1116250:intron 50.0%
CTGACATCAGGTTTCAGCTC+TGG + chr7_3:63869236-63869255 Msa1116250:intron 50.0%
GCCTGATGTAGAAGCGACAA+AGG + chr7_3:63869645-63869664 Msa1116250:intron 50.0%
GTTGGCCAAGGTGAAAGAGT+TGG + chr7_3:63870036-63870055 Msa1116250:intron 50.0%
GAGGTCCAACTCTTTCACCT+TGG - chr7_3:63870044-63870063 None:intergenic 50.0%
! CAAGGATGTGCAGCCTTATG+AGG - chr7_3:63870185-63870204 None:intergenic 50.0%
TGCTCCAAGCCTAAGTGAAG+AGG + chr7_3:63870298-63870317 Msa1116250:intron 50.0%
CACTGACACAAGAGCCTTGA+TGG + chr7_3:63870446-63870465 Msa1116250:intron 50.0%
GCCTTGATGGAGTTCAAAGC+TGG + chr7_3:63870459-63870478 Msa1116250:intron 50.0%
CGCGGCCAGTAAACAACGAA+AGG + chr7_3:63865693-63865712 Msa1116250:intron 55.0%
TACAAACCCGTGCTTCGCAC+GGG - chr7_3:63865991-63866010 None:intergenic 55.0%
AGGGGGACGAGAGATTGGAA+CGG + chr7_3:63866052-63866071 Msa1116250:intron 55.0%
ACGAGAGATTGGAACGGGAG+AGG + chr7_3:63866058-63866077 Msa1116250:intron 55.0%
GGGTGAGAGAAGAGGGAAAC+GGG + chr7_3:63866086-63866105 Msa1116250:intron 55.0%
GAGGGAACGGGAGAAAGAAG+AGG + chr7_3:63866114-63866133 Msa1116250:intron 55.0%
CGGGAGAAAGAAGAGGGAAC+GGG + chr7_3:63866121-63866140 Msa1116250:intron 55.0%
! TTGGGTGTTACATGCAGGGG+CGG + chr7_3:63866655-63866674 Msa1116250:intron 55.0%
AGAGATTGAGCCTCTGCAGC+AGG + chr7_3:63868415-63868434 Msa1116250:intron 55.0%
CGGTGTCCGTGGTAATACCA+AGG - chr7_3:63868865-63868884 None:intergenic 55.0%
CACCAAATTCACGGTGTCCG+TGG - chr7_3:63868876-63868895 None:intergenic 55.0%
AATCCTCCCCGTGCGAAGCA+CGG + chr7_3:63865981-63866000 Msa1116250:intron 60.0%
ACAAACCCGTGCTTCGCACG+GGG - chr7_3:63865990-63866009 None:intergenic 60.0%
GGGGGACGAGAGATTGGAAC+GGG + chr7_3:63866053-63866072 Msa1116250:intron 60.0%
GTTACATGCAGGGGCGGATC+TGG + chr7_3:63866661-63866680 Msa1116250:intron 60.0%
GCTCAACCGTCCCTATGCAC+GGG - chr7_3:63866789-63866808 None:intergenic 60.0%
CGCTCAACCGTCCCTATGCA+CGG - chr7_3:63866790-63866809 None:intergenic 60.0%
GATTTGGCCAGGGCATGGTG+TGG - chr7_3:63867281-63867300 None:intergenic 60.0%
! ACCAGGGACGGATTTGGCCA+GGG - chr7_3:63867291-63867310 None:intergenic 60.0%
! AACCAGGGACGGATTTGGCC+AGG - chr7_3:63867292-63867311 None:intergenic 60.0%
TTTCCCAGTGCCTGCTGCAG+AGG - chr7_3:63868428-63868447 None:intergenic 60.0%
GGGCGGTATCTGCTCATCTG+AGG + chr7_3:63868475-63868494 Msa1116250:intron 60.0%
ATCCTCCCCGTGCGAAGCAC+GGG + chr7_3:63865982-63866001 Msa1116250:intron 65.0%
GCACTTGCCACACCATGCCC+TGG + chr7_3:63867271-63867290 Msa1116250:intron 65.0%
! GGACGGATTTGGCCAGGGCA+TGG - chr7_3:63867286-63867305 None:intergenic 65.0%
TGAGCCTCTGCAGCAGGCAC+TGG + chr7_3:63868421-63868440 Msa1116250:intron 65.0%
GAGCCTCTGCAGCAGGCACT+GGG + chr7_3:63868422-63868441 Msa1116250:intron 65.0%
AACCCGTGCTTCGCACGGGG+AGG - chr7_3:63865987-63866006 None:intergenic 70.0%
GCCCTGGCCAAATCCGTCCC+TGG + chr7_3:63867287-63867306 Msa1116250:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 63864700 63870991 63864700 ID=Msa1116250;Name=Msa1116250
chr7_3 mRNA 63864700 63870991 63864700 ID=Msa1116250-mRNA-1;Parent=Msa1116250;Name=Msa1116250-mRNA-1;_AED=0.34;_eAED=0.41;_QI=0|0|0|1|0|0.5|4|0|243
chr7_3 exon 63864700 63864865 63864700 ID=Msa1116250-mRNA-1:exon:15027;Parent=Msa1116250-mRNA-1
chr7_3 exon 63864900 63865051 63864900 ID=Msa1116250-mRNA-1:exon:15028;Parent=Msa1116250-mRNA-1
chr7_3 exon 63869253 63869486 63869253 ID=Msa1116250-mRNA-1:exon:15029;Parent=Msa1116250-mRNA-1
chr7_3 exon 63870812 63870991 63870812 ID=Msa1116250-mRNA-1:exon:15030;Parent=Msa1116250-mRNA-1
chr7_3 CDS 63864700 63864865 63864700 ID=Msa1116250-mRNA-1:cds;Parent=Msa1116250-mRNA-1
chr7_3 CDS 63864900 63865051 63864900 ID=Msa1116250-mRNA-1:cds;Parent=Msa1116250-mRNA-1
chr7_3 CDS 63869253 63869486 63869253 ID=Msa1116250-mRNA-1:cds;Parent=Msa1116250-mRNA-1
chr7_3 CDS 63870812 63870991 63870812 ID=Msa1116250-mRNA-1:cds;Parent=Msa1116250-mRNA-1
Gene Sequence

>Msa1116250

ATGAATCAAAAGTCTTCATATATAGGTGTGAGAAAAAGACCTAGGGGAAAATATGCAGCAGAGATCAGAGACACAACAAGAAGAGGAAGAAGGGTTTGGCTTGGAACATTTGATAGTGTTGAGGATGCTGCTTTGGCTTACGATCAAGCTGCATTTTTAATGAGAGGGTCAAAGGATCTTTGCAAGAGATTCAATATGATTGCAGAGGGGTTTTCACCTGAACTTGCACTCAAGGAGAGACACTGTGAACAAAGAAAGATGTTATCCAAAGGTGTAAAAAATAAAGCAGGGAAACAAGATCAATCAGAGGGATCAAGTCTCTGGCCGTACATTAAGCTAACGATCATCTTATGGCTCATCATACCGGATTTTGGACGAACTCCTTATGTTTATAACAACCTTATTCGCTCCATGAAACGACAAATAGTCACATGGAGGTTAAATAGCTACTGGAGAGATTGTTTTGCTGAGAAAGATAGCTTTTTACTGCATGCAGAGAGATATATGATAGAGAATGGAACTGAAACCTTACAGAAACTCATTGCTAGCAAGATGGTTAGGTGTTTGATTACATTGCTAAATATGCAATATTGTTTGTGTGGTTTTCTTTCCTTTGATATGATTGATTTCTCATCGAGTTCGCAGACAACAATTACCGAAAATGAGCCAAAACAATTGATGTTGAAGTCATCATCATCTGAAGCAAAGGAAGTGTTGCAGAATAATAATTAG
Protein sequence

>Msa1116250

MNQKSSYIGVRKRPRGKYAAEIRDTTRRGRRVWLGTFDSVEDAALAYDQAAFLMRGSKDLCKRFNMIAEGFSPELALKERHCEQRKMLSKGVKNKAGKQDQSEGSSLWPYIKLTIILWLIIPDFGRTPYVYNNLIRSMKRQIVTWRLNSYWRDCFAEKDSFLLHAERYMIENGTETLQKLIASKMVRCLITLLNMQYCLCGFLSFDMIDFSSSSQTTITENEPKQLMLKSSSSEAKEVLQNNN*