Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251910 | XP_024628813.2 | 96.247 | 986 | 37 | 0 | 1 | 986 | 1 | 986 | 0.0 | 1927 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251910 | sp|Q94CG5|KIP1_PETIN | 41.992 | 1024 | 491 | 27 | 1 | 979 | 1 | 966 | 0.0 | 671 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251910 | A0A072U2T5 | 96.247 | 986 | 37 | 0 | 1 | 986 | 1 | 986 | 0.0 | 1927 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016570 | Msa1251910 | 0.811680 | 6.202893e-51 | -8.615850e-47 |
| Msa0071500 | Msa1251910 | 0.839765 | 1.302654e-57 | -8.615850e-47 |
| Msa0678930 | Msa1251910 | 0.817834 | 2.684555e-52 | -8.615850e-47 |
| Msa0688270 | Msa1251910 | 0.801969 | 7.004789e-49 | -8.615850e-47 |
| Msa0711830 | Msa1251910 | 0.801905 | 7.221990e-49 | -8.615850e-47 |
| Msa0724210 | Msa1251910 | 0.800814 | 1.208038e-48 | -8.615850e-47 |
| Msa0728060 | Msa1251910 | 0.806121 | 9.592379e-50 | -8.615850e-47 |
| Msa0729800 | Msa1251910 | 0.822021 | 2.959837e-53 | -8.615850e-47 |
| Msa0736000 | Msa1251910 | 0.800356 | 1.497942e-48 | -8.615850e-47 |
| Msa0743810 | Msa1251910 | 0.800661 | 1.298069e-48 | -8.615850e-47 |
| Msa0745060 | Msa1251910 | 0.800622 | 1.321788e-48 | -8.615850e-47 |
| Msa0766630 | Msa1251910 | 0.848500 | 5.890617e-60 | -8.615850e-47 |
| Msa0767720 | Msa1251910 | 0.802789 | 4.749452e-49 | -8.615850e-47 |
| Msa0768310 | Msa1251910 | 0.816957 | 4.231279e-52 | -8.615850e-47 |
| Msa0783160 | Msa1251910 | 0.805234 | 1.473280e-49 | -8.615850e-47 |
| Msa0787600 | Msa1251910 | 0.802282 | 6.040846e-49 | -8.615850e-47 |
| Msa0808010 | Msa1251910 | 0.801411 | 9.121177e-49 | -8.615850e-47 |
| Msa0810220 | Msa1251910 | 0.810473 | 1.132567e-50 | -8.615850e-47 |
| Msa0811080 | Msa1251910 | 0.852249 | 5.226331e-61 | -8.615850e-47 |
| Msa0131770 | Msa1251910 | 0.806494 | 8.004065e-50 | -8.615850e-47 |
| Msa0142220 | Msa1251910 | 0.838280 | 3.159178e-57 | -8.615850e-47 |
| Msa0218810 | Msa1251910 | 0.801930 | 7.137416e-49 | -8.615850e-47 |
| Msa1251910 | Msa1269670 | 0.812832 | 3.475928e-51 | -8.615850e-47 |
| Msa1251910 | Msa1270230 | 0.806688 | 7.286094e-50 | -8.615850e-47 |
| Msa1251910 | Msa1284680 | 0.811746 | 6.001926e-51 | -8.615850e-47 |
| Msa1251910 | Msa1285930 | 0.819380 | 1.197592e-52 | -8.615850e-47 |
| Msa1251910 | Msa1287810 | 0.814582 | 1.431784e-51 | -8.615850e-47 |
| Msa1251910 | Msa1292570 | 0.846218 | 2.492867e-59 | -8.615850e-47 |
| Msa1251910 | Msa1372980 | 0.820294 | 7.401246e-53 | -8.615850e-47 |
| Msa1251910 | Msa1373030 | 0.802656 | 5.059608e-49 | -8.615850e-47 |
| Msa1251910 | Msa1382690 | 0.803893 | 2.805200e-49 | -8.615850e-47 |
| Msa1251910 | Msa1451570 | 0.811930 | 5.471144e-51 | -8.615850e-47 |
| Msa1251910 | Msa1466540 | 0.805152 | 1.532539e-49 | -8.615850e-47 |
| Msa0378360 | Msa1251910 | 0.805637 | 1.212458e-49 | -8.615850e-47 |
| Msa0402290 | Msa1251910 | 0.802232 | 6.185428e-49 | -8.615850e-47 |
| Msa0407750 | Msa1251910 | 0.811247 | 7.700913e-51 | -8.615850e-47 |
| Msa0427710 | Msa1251910 | 0.801761 | 7.729638e-49 | -8.615850e-47 |
| Msa0436800 | Msa1251910 | 0.807451 | 5.022468e-50 | -8.615850e-47 |
| Msa0458090 | Msa1251910 | 0.822096 | 2.843928e-53 | -8.615850e-47 |
| Msa1014540 | Msa1251910 | 0.805846 | 1.096036e-49 | -8.615850e-47 |
| Msa1023950 | Msa1251910 | 0.809730 | 1.637801e-50 | -8.615850e-47 |
| Msa1024240 | Msa1251910 | 0.809449 | 1.881765e-50 | -8.615850e-47 |
| Msa1075650 | Msa1251910 | 0.813697 | 2.245337e-51 | -8.615850e-47 |
| Msa1092990 | Msa1251910 | 0.807695 | 4.458898e-50 | -8.615850e-47 |
| Msa0273100 | Msa1251910 | 0.820044 | 8.445387e-53 | -8.615850e-47 |
| Msa0290870 | Msa1251910 | 0.818067 | 2.377828e-52 | -8.615850e-47 |
| Msa0360510 | Msa1251910 | 0.806611 | 7.561668e-50 | -8.615850e-47 |
| Msa1109440 | Msa1251910 | 0.802164 | 6.386878e-49 | -8.615850e-47 |
| Msa1116250 | Msa1251910 | 0.802421 | 5.655323e-49 | -8.615850e-47 |
| Msa1116260 | Msa1251910 | 0.817065 | 4.000530e-52 | -8.615850e-47 |
| Msa1117150 | Msa1251910 | 0.806196 | 9.251520e-50 | -8.615850e-47 |
| Msa1121480 | Msa1251910 | 0.807054 | 6.097490e-50 | -8.615850e-47 |
| Msa1121490 | Msa1251910 | 0.824393 | 8.271219e-54 | -8.615850e-47 |
| Msa1146110 | Msa1251910 | 0.811992 | 5.303350e-51 | -8.615850e-47 |
| Msa1160670 | Msa1251910 | 0.807190 | 5.705336e-50 | -8.615850e-47 |
| Msa1187940 | Msa1251910 | 0.813518 | 2.458574e-51 | -8.615850e-47 |
| Msa1187950 | Msa1251910 | 0.810287 | 1.242663e-50 | -8.615850e-47 |
| Msa1192640 | Msa1251910 | 0.801291 | 9.649148e-49 | -8.615850e-47 |
| Msa1198400 | Msa1251910 | 0.836020 | 1.194877e-56 | -8.615850e-47 |
| Msa0502340 | Msa1251910 | 0.802817 | 4.685140e-49 | -8.615850e-47 |
| Msa0512900 | Msa1251910 | 0.821475 | 3.958966e-53 | -8.615850e-47 |
| Msa0518540 | Msa1251910 | 0.812767 | 3.591912e-51 | -8.615850e-47 |
| Msa0537500 | Msa1251910 | 0.811412 | 7.093567e-51 | -8.615850e-47 |
| Msa0541130 | Msa1251910 | 0.812625 | 3.859610e-51 | -8.615850e-47 |
| Msa0600700 | Msa1251910 | 0.807376 | 5.209430e-50 | -8.615850e-47 |
| Msa0846330 | Msa1251910 | 0.800537 | 1.375962e-48 | -8.615850e-47 |
| Msa0846350 | Msa1251910 | 0.812130 | 4.949824e-51 | -8.615850e-47 |
| Msa0888370 | Msa1251910 | 0.803798 | 2.935001e-49 | -8.615850e-47 |
| Msa0956270 | Msa1251910 | 0.812377 | 4.371509e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251910 | MtrunA17_Chr8g0367521 | 96.247 | 986 | 37 | 0 | 1 | 986 | 1 | 986 | 0.0 | 1927 |
| Msa1251910 | MtrunA17_Chr5g0412211 | 53.190 | 1160 | 353 | 22 | 1 | 986 | 1 | 1144 | 0.0 | 1050 |
| Msa1251910 | MtrunA17_Chr3g0132861 | 36.638 | 1029 | 498 | 25 | 21 | 987 | 16 | 952 | 2.76e-177 | 541 |
| Msa1251910 | MtrunA17_Chr5g0427501 | 39.410 | 373 | 165 | 10 | 666 | 979 | 590 | 960 | 2.49e-65 | 238 |
| Msa1251910 | MtrunA17_Chr1g0185241 | 52.991 | 117 | 49 | 1 | 10 | 120 | 15 | 131 | 5.52e-36 | 148 |
| Msa1251910 | MtrunA17_Chr1g0204981 | 47.727 | 132 | 66 | 1 | 1 | 129 | 4 | 135 | 5.88e-36 | 148 |
| Msa1251910 | MtrunA17_Chr7g0260161 | 48.062 | 129 | 56 | 1 | 10 | 138 | 13 | 130 | 3.28e-34 | 142 |
| Msa1251910 | MtrunA17_Chr5g0394641 | 30.628 | 382 | 193 | 10 | 10 | 362 | 13 | 351 | 7.68e-34 | 141 |
| Msa1251910 | MtrunA17_Chr5g0432781 | 47.154 | 123 | 55 | 3 | 9 | 131 | 20 | 132 | 7.84e-30 | 126 |
| Msa1251910 | MtrunA17_Chr7g0268631 | 47.826 | 92 | 45 | 2 | 11 | 99 | 53 | 144 | 2.32e-22 | 99.8 |
| Msa1251910 | MtrunA17_Chr1g0196081 | 34.211 | 114 | 71 | 1 | 2 | 111 | 8 | 121 | 2.18e-18 | 89.7 |
| Msa1251910 | MtrunA17_Chr3g0107891 | 47.312 | 93 | 44 | 2 | 33 | 123 | 15 | 104 | 1.14e-17 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251910 | AT2G22560.1 | 57.701 | 461 | 182 | 6 | 1 | 457 | 1 | 452 | 1.78e-161 | 499 |
| Msa1251910 | AT5G10500.1 | 47.468 | 474 | 217 | 7 | 1 | 469 | 1 | 447 | 3.52e-131 | 417 |
| Msa1251910 | AT5G10500.1 | 38.213 | 403 | 198 | 10 | 589 | 979 | 470 | 833 | 5.54e-57 | 212 |
| Msa1251910 | AT1G58215.1 | 45.489 | 521 | 214 | 11 | 1 | 491 | 1 | 481 | 1.63e-128 | 413 |
| Msa1251910 | AT1G58215.1 | 39.609 | 409 | 182 | 8 | 637 | 980 | 514 | 922 | 2.90e-68 | 247 |
| Msa1251910 | AT1G09720.1 | 45.378 | 476 | 223 | 7 | 1 | 468 | 1 | 447 | 3.11e-117 | 382 |
| Msa1251910 | AT1G09720.1 | 40.220 | 363 | 167 | 9 | 663 | 980 | 544 | 901 | 1.22e-65 | 239 |
| Msa1251910 | AT3G22790.1 | 30.237 | 506 | 274 | 17 | 1 | 467 | 4 | 469 | 4.33e-43 | 171 |
| Msa1251910 | AT3G22790.3 | 30.237 | 506 | 274 | 17 | 1 | 467 | 4 | 469 | 4.33e-43 | 171 |
| Msa1251910 | AT3G22790.2 | 30.237 | 506 | 274 | 17 | 1 | 467 | 4 | 469 | 4.33e-43 | 171 |
| Msa1251910 | AT4G14760.4 | 29.058 | 499 | 284 | 18 | 3 | 467 | 6 | 468 | 6.13e-36 | 149 |
| Msa1251910 | AT4G14760.2 | 29.058 | 499 | 284 | 18 | 3 | 467 | 6 | 468 | 6.13e-36 | 149 |
| Msa1251910 | AT4G14760.3 | 29.058 | 499 | 284 | 18 | 3 | 467 | 6 | 468 | 6.13e-36 | 149 |
| Msa1251910 | AT4G14760.1 | 29.058 | 499 | 284 | 18 | 3 | 467 | 6 | 468 | 6.13e-36 | 149 |
| Msa1251910 | AT1G03080.3 | 39.326 | 178 | 97 | 2 | 7 | 178 | 9 | 181 | 2.26e-35 | 147 |
| Msa1251910 | AT1G03080.1 | 39.326 | 178 | 97 | 2 | 7 | 178 | 9 | 181 | 2.26e-35 | 147 |
| Msa1251910 | AT1G03080.2 | 39.326 | 178 | 97 | 2 | 7 | 178 | 9 | 181 | 2.26e-35 | 147 |
| Msa1251910 | AT4G02710.1 | 32.797 | 311 | 174 | 10 | 5 | 289 | 5 | 306 | 3.89e-33 | 139 |
| Msa1251910 | AT2G30500.2 | 55.682 | 88 | 38 | 1 | 9 | 96 | 20 | 106 | 4.24e-26 | 114 |
| Msa1251910 | AT2G30500.1 | 55.682 | 88 | 38 | 1 | 9 | 96 | 20 | 106 | 4.24e-26 | 114 |
| Msa1251910 | AT2G30500.3 | 55.682 | 88 | 38 | 1 | 9 | 96 | 19 | 105 | 4.64e-26 | 114 |
| Msa1251910 | AT5G58320.1 | 54.217 | 83 | 38 | 0 | 12 | 94 | 23 | 105 | 1.93e-24 | 109 |
| Msa1251910 | AT5G58320.4 | 54.217 | 83 | 38 | 0 | 12 | 94 | 23 | 105 | 1.93e-24 | 109 |
| Msa1251910 | AT5G58320.5 | 54.217 | 83 | 38 | 0 | 12 | 94 | 23 | 105 | 1.96e-24 | 109 |
| Msa1251910 | AT5G58320.2 | 54.217 | 83 | 38 | 0 | 12 | 94 | 23 | 105 | 1.96e-24 | 109 |
| Msa1251910 | AT2G47920.2 | 42.105 | 114 | 58 | 2 | 12 | 117 | 10 | 123 | 3.10e-22 | 97.1 |
| Msa1251910 | AT2G47920.1 | 42.105 | 114 | 58 | 2 | 12 | 117 | 10 | 123 | 3.10e-22 | 97.1 |
| Msa1251910 | AT1G03470.2 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 5.58e-20 | 91.7 |
| Msa1251910 | AT1G03470.3 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 5.58e-20 | 91.7 |
| Msa1251910 | AT1G03470.1 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 5.58e-20 | 91.7 |
| Msa1251910 | AT1G03470.4 | 52.632 | 76 | 35 | 1 | 12 | 86 | 8 | 83 | 5.58e-20 | 91.7 |
| Msa1251910 | AT5G58320.3 | 51.613 | 62 | 30 | 0 | 33 | 94 | 1 | 62 | 1.32e-13 | 74.7 |
| Msa1251910 | AT4G03153.1 | 36.458 | 96 | 55 | 3 | 12 | 101 | 7 | 102 | 2.79e-11 | 64.7 |
Find 136 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCATCATTCAATAAGATTT+TGG | 0.160648 | 8_2:+48491161 | None:intergenic |
| ATGCTGTTGTTATCTCTTCT+TGG | 0.181149 | 8_2:+48490257 | None:intergenic |
| TTTCTACTCAATCCTGATTT+AGG | 0.182892 | 8_2:+48492362 | None:intergenic |
| CCTTACTTCCCTTACTCTTT+TGG | 0.192513 | 8_2:+48492034 | None:intergenic |
| CCTCGTTCGGTATCACCTTT+TGG | 0.225729 | 8_2:+48491280 | None:intergenic |
| AATCCTGATTTAGGAGCTTT+AGG | 0.233147 | 8_2:+48492371 | None:intergenic |
| ATAATTCCATTGCTAGATAT+TGG | 0.234388 | 8_2:-48492256 | Msa1251910:CDS |
| ACCGAGTTCGTCTTGCAAAT+TGG | 0.261286 | 8_2:+48492193 | None:intergenic |
| TCAACAGCAGAAGTTGATTC+TGG | 0.268774 | 8_2:+48490592 | None:intergenic |
| CCTCGTCTGGTATCACCTTT+TGG | 0.271862 | 8_2:+48491487 | None:intergenic |
| CCTCTAAGGTCATTTATCTT+TGG | 0.277004 | 8_2:-48489989 | Msa1251910:CDS |
| TTTACATCTCGTTTCGGCCT+CGG | 0.284477 | 8_2:+48491954 | None:intergenic |
| GCAAACGTGACAATGCTTCT+TGG | 0.304395 | 8_2:+48492099 | None:intergenic |
| TCCATATAAGGAACTCTATC+TGG | 0.306812 | 8_2:+48492563 | None:intergenic |
| CTGCTGTTGAAGAGAAGTTT+AGG | 0.318730 | 8_2:-48490579 | Msa1251910:CDS |
| CAATACGGCCATTTATTCAT+TGG | 0.319468 | 8_2:-48491130 | Msa1251910:CDS |
| TGAAACGGAAAAGGAAAGTT+TGG | 0.339852 | 8_2:-48491667 | Msa1251910:CDS |
| AGTGGAGTCTTTGGAGCTTT+CGG | 0.340366 | 8_2:+48492473 | None:intergenic |
| TCCAGATAGAGTTCCTTATA+TGG | 0.346090 | 8_2:-48492564 | Msa1251910:CDS |
| CAATGAATCAATGGCCGTAT+TGG | 0.347905 | 8_2:+48491314 | None:intergenic |
| TAGAGGAGAATCTAGAATTC+TGG | 0.350291 | 8_2:-48490537 | Msa1251910:CDS |
| AAATCATGAAAAGGATTATA+AGG | 0.353380 | 8_2:-48490968 | Msa1251910:CDS |
| TAATTCCATTGCTAGATATT+GGG | 0.353589 | 8_2:-48492255 | Msa1251910:CDS |
| TCGTCGTCTTCATCCATATA+AGG | 0.354630 | 8_2:+48492551 | None:intergenic |
| CAATACGGCCATTGATTCAT+TGG | 0.356004 | 8_2:-48491313 | Msa1251910:CDS |
| TCTCTTTCTTTCAACACTAT+AGG | 0.361479 | 8_2:+48491042 | None:intergenic |
| GTCACGTTTGCAAGAGAAAC+AGG | 0.366657 | 8_2:-48492087 | Msa1251910:CDS |
| CAATGAATAAATGGCCGTAT+TGG | 0.369188 | 8_2:+48491131 | None:intergenic |
| CATATTGAAGTTGATTCATA+AGG | 0.369783 | 8_2:+48491997 | None:intergenic |
| TATCGAAGCTCGAAACAAAA+TGG | 0.379973 | 8_2:-48490444 | Msa1251910:CDS |
| TTTGGAGCTTTCGGAACATT+TGG | 0.382076 | 8_2:+48492482 | None:intergenic |
| TCAACAAAGTTTATTAGCTC+TGG | 0.383758 | 8_2:+48492680 | None:intergenic |
| TTAGAACAAAGCAATCAAAA+TGG | 0.387996 | 8_2:-48493305 | Msa1251910:CDS |
| CCAAAGATAAATGACCTTAG+AGG | 0.389815 | 8_2:+48489989 | None:intergenic |
| CCAAAAGAGTAAGGGAAGTA+AGG | 0.391738 | 8_2:-48492034 | Msa1251910:CDS |
| ACTCTTTGAGTCATCATTGC+AGG | 0.396481 | 8_2:-48490785 | Msa1251910:CDS |
| TTTCGAGGCTGGCTCAAATT+CGG | 0.396521 | 8_2:-48491835 | Msa1251910:CDS |
| CGAAGAACCGTGTTCCTCTA+AGG | 0.410206 | 8_2:-48490003 | Msa1251910:CDS |
| TCGAATCCGAAGGTCTCATC+TGG | 0.419762 | 8_2:+48490023 | None:intergenic |
| TTCAAAATGAACTCACACTA+TGG | 0.420988 | 8_2:-48490342 | Msa1251910:CDS |
| TGTGATTTAACGTCATGTTT+CGG | 0.423072 | 8_2:+48491201 | None:intergenic |
| TGTGATTTAACATCATGTTT+CGG | 0.423322 | 8_2:+48491387 | None:intergenic |
| GACAGACGCAATTGTGTTGT+TGG | 0.424832 | 8_2:+48492589 | None:intergenic |
| TACAAAAGATTTACTGATTG+AGG | 0.424969 | 8_2:-48490467 | Msa1251910:CDS |
| AGGTCTCATCTGGTTTCTCT+TGG | 0.426345 | 8_2:+48490033 | None:intergenic |
| GAACGAGAAACTTAGAGAAA+TGG | 0.426500 | 8_2:-48491625 | Msa1251910:CDS |
| GGCTTTAACCGTGACAGAAA+TGG | 0.430771 | 8_2:-48491814 | Msa1251910:CDS |
| TTGCTTTGTTCTAATGTGGC+TGG | 0.431424 | 8_2:+48493314 | None:intergenic |
| ACTTAGAGAAATGGACGAAA+TGG | 0.431565 | 8_2:-48491616 | Msa1251910:CDS |
| TTTAAAGCTTCTAGAAGAAG+AGG | 0.435154 | 8_2:-48492747 | Msa1251910:CDS |
| GATACCAGACGAGGACGATA+TGG | 0.437799 | 8_2:-48491478 | Msa1251910:CDS |
| ACTCCTAAAGCTCCTAAATC+AGG | 0.441379 | 8_2:-48492374 | Msa1251910:CDS |
| TCGAATCTCTTCGTCTTTCA+CGG | 0.443211 | 8_2:+48490738 | None:intergenic |
| CGAGATGTAAAAGAAGTAAC+AGG | 0.444047 | 8_2:-48491942 | Msa1251910:CDS |
| GAAGATTAAAGAACATTTCG+AGG | 0.454058 | 8_2:-48491850 | Msa1251910:CDS |
| GCAATGCTTATTCATGGTGG+TGG | 0.462825 | 8_2:-48493338 | Msa1251910:CDS |
| GATACCGAACGAGGAGGATA+AGG | 0.464288 | 8_2:-48491271 | Msa1251910:CDS |
| TCATATTCAAAACCTCTCCT+TGG | 0.464431 | 8_2:+48490176 | None:intergenic |
| GAGCAGAAATGTATTACAAA+AGG | 0.465180 | 8_2:-48492706 | Msa1251910:CDS |
| GCCAAAATCTTATTGAATGA+TGG | 0.465978 | 8_2:-48491162 | Msa1251910:CDS |
| AAATGAACTCACACTATGGC+TGG | 0.467020 | 8_2:-48490338 | Msa1251910:CDS |
| CTCACCTTATCCTCCTCGTT+CGG | 0.467284 | 8_2:+48491267 | None:intergenic |
| CGAGGAGGCTCGCCGTTTGA+TGG | 0.468797 | 8_2:-48492144 | Msa1251910:CDS |
| ATTAAAGAACATTTCGAGGC+TGG | 0.469351 | 8_2:-48491846 | Msa1251910:CDS |
| AAATTGAGTCCAAAAGAGTA+AGG | 0.469592 | 8_2:-48492043 | Msa1251910:CDS |
| CTGCAAGCAATGCTTATTCA+TGG | 0.477662 | 8_2:-48493344 | Msa1251910:CDS |
| TACAGTTGTTGCTTTCTCCT+CGG | 0.477858 | 8_2:+48490906 | None:intergenic |
| GCTGGTTCGCAACCTTGAAA+CGG | 0.479618 | 8_2:-48491682 | Msa1251910:CDS |
| TTGATTGCTTTGTTCTAATG+TGG | 0.483955 | 8_2:+48493310 | None:intergenic |
| GTTGCTGATGAGCTTCAAGC+TGG | 0.484637 | 8_2:-48490136 | Msa1251910:CDS |
| TTGGAGGGAAATGAAGAAAT+CGG | 0.485167 | 8_2:-48490679 | Msa1251910:CDS |
| TGTTCTGATCTTCAACAACT+TGG | 0.492297 | 8_2:+48491571 | None:intergenic |
| ACCAGAAAATCATGTTATTG+AGG | 0.492750 | 8_2:-48490635 | Msa1251910:CDS |
| TGTTTCGTATTTCTGTATCT+CGG | 0.495141 | 8_2:+48490492 | None:intergenic |
| ATAATAGAATCAATTGATGC+TGG | 0.495898 | 8_2:-48490991 | Msa1251910:CDS |
| ATTGGAAAATGAAGTCCAAA+AGG | 0.496529 | 8_2:-48491295 | Msa1251910:CDS |
| TCTCTCTGATAAAGTCCAAA+AGG | 0.496569 | 8_2:-48491502 | Msa1251910:CDS |
| CTCACCATATCGTCCTCGTC+TGG | 0.496644 | 8_2:+48491474 | None:intergenic |
| ATATTGAAGTTGATTCATAA+GGG | 0.500924 | 8_2:+48491998 | None:intergenic |
| GGAAACTGAGGGACAGATCA+AGG | 0.501428 | 8_2:-48492234 | Msa1251910:CDS |
| CAAAAGAGTAAGGGAAGTAA+GGG | 0.506192 | 8_2:-48492033 | Msa1251910:CDS |
| TGATGCTGGAAATCATGAAA+AGG | 0.514888 | 8_2:-48490977 | Msa1251910:CDS |
| TCGCAACCTTGAAACGGAAA+AGG | 0.515404 | 8_2:-48491676 | Msa1251910:CDS |
| AGTTTCTTCTCAAACAGCAT+TGG | 0.519459 | 8_2:-48491742 | Msa1251910:CDS |
| TCCAATTTGCAAGACGAACT+CGG | 0.522122 | 8_2:-48492194 | Msa1251910:CDS |
| ATCAAGACTACAATGCGCTT+CGG | 0.526939 | 8_2:+48491527 | None:intergenic |
| GAGAAACCAGATGAGACCTT+CGG | 0.531704 | 8_2:-48490029 | Msa1251910:CDS |
| AACAAAGCAATCAAAATGGA+TGG | 0.532965 | 8_2:-48493301 | Msa1251910:CDS |
| CGTACCTATCGGCTAAAGAT+CGG | 0.533688 | 8_2:+48492639 | None:intergenic |
| TATAATGCTGCGAAATTCCA+AGG | 0.539140 | 8_2:-48490193 | Msa1251910:CDS |
| AACTGATGAACTCCATTCGC+TGG | 0.544339 | 8_2:-48491700 | Msa1251910:CDS |
| TCTTCAACTTGATGCTGAGA+AGG | 0.544826 | 8_2:-48490095 | Msa1251910:CDS |
| GAGCCGCTTCTGCCATCAAA+CGG | 0.544838 | 8_2:+48492132 | None:intergenic |
| TTAAAGCTTCTAGAAGAAGA+GGG | 0.544929 | 8_2:-48492746 | Msa1251910:CDS |
| TGAAGTATTTCAAACAGAAG+AGG | 0.545693 | 8_2:-48491451 | Msa1251910:CDS |
| AAAGGATTTGAGTGAAGATG+TGG | 0.556266 | 8_2:-48491916 | Msa1251910:CDS |
| TGTTGAAGAGAAGTTTAGGA+TGG | 0.566244 | 8_2:-48490575 | Msa1251910:CDS |
| TCTGCAAGGTGCTTATAAAG+TGG | 0.568092 | 8_2:+48490367 | None:intergenic |
| TGCTAGATATTGGGAAACTG+AGG | 0.569587 | 8_2:-48492246 | Msa1251910:CDS |
| GGAAAACAGCGCGTTGCTGA+AGG | 0.570843 | 8_2:-48490317 | Msa1251910:CDS |
| TCGCCGTTTGATGGCAGAAG+CGG | 0.572967 | 8_2:-48492135 | Msa1251910:CDS |
| TGATGGTGAAAAGTCCAATA+CGG | 0.576426 | 8_2:-48491145 | Msa1251910:CDS |
| TAGAAAGCAAGCAATTGAAG+AGG | 0.578147 | 8_2:-48492345 | Msa1251910:CDS |
| TTGCTGATGAGCTTCAAGCT+GGG | 0.579094 | 8_2:-48490135 | Msa1251910:CDS |
| TGATGATGCAAAGTCCAATA+CGG | 0.579579 | 8_2:-48491328 | Msa1251910:CDS |
| CAAGGTTGCGAACCAGCGAA+TGG | 0.582849 | 8_2:+48491688 | None:intergenic |
| GTTGAAGAGAAGTTTAGGAT+GGG | 0.590016 | 8_2:-48490574 | Msa1251910:CDS |
| AATGAAATGTGCAGATATGG+AGG | 0.592734 | 8_2:-48492786 | Msa1251910:intron |
| TTATAAGGAAATTTCATCTG+AGG | 0.593385 | 8_2:-48490953 | Msa1251910:CDS |
| CTTGTTACTGAATTTCCTTG+TGG | 0.598228 | 8_2:+48492415 | None:intergenic |
| TATATCATCATTTCAAAGCA+CGG | 0.601898 | 8_2:+48489915 | None:intergenic |
| ACAAAATGGAAAGCAACAGA+AGG | 0.603333 | 8_2:-48490430 | Msa1251910:CDS |
| TGCTGCGAAATTCCAAGGAG+AGG | 0.604091 | 8_2:-48490188 | Msa1251910:CDS |
| AAAAGAAGTAACAGGAACAA+AGG | 0.607695 | 8_2:-48491934 | Msa1251910:CDS |
| AATTGAGTCCAAAAGAGTAA+GGG | 0.610184 | 8_2:-48492042 | Msa1251910:CDS |
| CAATGCTTATTCATGGTGGT+GGG | 0.611643 | 8_2:-48493337 | Msa1251910:CDS |
| TTGCAAGACGAACTCGGTGA+AGG | 0.618782 | 8_2:-48492188 | Msa1251910:CDS |
| GGGAATCGACGAACTTCTAG+AGG | 0.619415 | 8_2:-48490554 | Msa1251910:CDS |
| AGTTTCCCAATATCTAGCAA+TGG | 0.619821 | 8_2:+48492250 | None:intergenic |
| TGACAAGTGATCGTACCTAT+CGG | 0.627201 | 8_2:+48492628 | None:intergenic |
| CGGCTAAAGATCGGTATGCA+CGG | 0.631655 | 8_2:+48492648 | None:intergenic |
| AATCCAATTCGCAAAAGCCG+AGG | 0.632575 | 8_2:-48491971 | Msa1251910:CDS |
| ACACGGTTCTTCGAATCCGA+AGG | 0.634630 | 8_2:+48490013 | None:intergenic |
| TGGATGGAACAAAACCTCCA+AGG | 0.641564 | 8_2:-48493285 | Msa1251910:intron |
| GCTAGATATTGGGAAACTGA+GGG | 0.645079 | 8_2:-48492245 | Msa1251910:CDS |
| AAAAGAAGAAACAATCTCAG+TGG | 0.647729 | 8_2:-48491076 | Msa1251910:CDS |
| TAATGTTATTGATGACGAGG+AGG | 0.647964 | 8_2:-48492159 | Msa1251910:CDS |
| CATACCGATCTTTAGCCGAT+AGG | 0.649267 | 8_2:-48492643 | Msa1251910:CDS |
| CCAAAAGGTGATACCGAACG+AGG | 0.672752 | 8_2:-48491280 | Msa1251910:CDS |
| TAACTACAGCGACAGCCACA+AGG | 0.673857 | 8_2:-48492430 | Msa1251910:CDS |
| TGTTAATGTTATTGATGACG+AGG | 0.676108 | 8_2:-48492162 | Msa1251910:CDS |
| ACGACGACGAAGCATCACCA+AGG | 0.688902 | 8_2:-48492535 | Msa1251910:CDS |
| CAAGCAATGCTTATTCATGG+TGG | 0.700776 | 8_2:-48493341 | Msa1251910:CDS |
| AAAGGTGATACCGAACGAGG+AGG | 0.701902 | 8_2:-48491277 | Msa1251910:CDS |
| CCAAAAGGTGATACCAGACG+AGG | 0.715557 | 8_2:-48491487 | Msa1251910:CDS |
| TAAATGACCTTAGAGGAACA+CGG | 0.755952 | 8_2:+48489996 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTATAGAAACAAGAAAATT+AGG | + | chr8_2:48490031-48490050 | None:intergenic | 20.0% |
| !!! | TGCTATTTCTTATTGTTTTT+TGG | - | chr8_2:48490112-48490131 | Msa1251910:CDS | 20.0% |
| !!! | ACACTTTTTAAATCTTTTAG+TGG | + | chr8_2:48490827-48490846 | None:intergenic | 20.0% |
| !!! | ATATTGAAGTTGATTCATAA+GGG | + | chr8_2:48491284-48491303 | None:intergenic | 20.0% |
| !!! | TTCATTTTCCAATGAATAAA+TGG | + | chr8_2:48492160-48492179 | None:intergenic | 20.0% |
| !! | AAATCATGAAAAGGATTATA+AGG | - | chr8_2:48492311-48492330 | Msa1251910:CDS | 20.0% |
| ! | TTAGAACAAAGCAATCAAAA+TGG | - | chr8_2:48489974-48489993 | Msa1251910:CDS | 25.0% |
| ! | ATTAGGAGAAAAAATAACCT+TGG | + | chr8_2:48490014-48490033 | None:intergenic | 25.0% |
| ! | AAACGTTAACTATTCATGTA+CGG | + | chr8_2:48490299-48490318 | None:intergenic | 25.0% |
| ! | AGAATCACACATATTAAGTA+TGG | - | chr8_2:48490351-48490370 | Msa1251910:CDS | 25.0% |
| ! | ATAATTCCATTGCTAGATAT+TGG | - | chr8_2:48491023-48491042 | Msa1251910:CDS | 25.0% |
| ! | TAATTCCATTGCTAGATATT+GGG | - | chr8_2:48491024-48491043 | Msa1251910:CDS | 25.0% |
| !! | CATATTGAAGTTGATTCATA+AGG | + | chr8_2:48491285-48491304 | None:intergenic | 25.0% |
| ! | TGTGATTTAACATCATGTTT+CGG | + | chr8_2:48491895-48491914 | None:intergenic | 25.0% |
| !! | TTCATTTTCCAATGAATCAA+TGG | + | chr8_2:48491977-48491996 | None:intergenic | 25.0% |
| !! | ACCATCATTCAATAAGATTT+TGG | + | chr8_2:48492121-48492140 | None:intergenic | 25.0% |
| !!! | TTCTTCTTTTGTTTGTGAAT+CGG | + | chr8_2:48492193-48492212 | None:intergenic | 25.0% |
| ! | ATAATAGAATCAATTGATGC+TGG | - | chr8_2:48492288-48492307 | Msa1251910:CDS | 25.0% |
| ! | TTATAAGGAAATTTCATCTG+AGG | - | chr8_2:48492326-48492345 | Msa1251910:CDS | 25.0% |
| !! | TACAAAAGATTTACTGATTG+AGG | - | chr8_2:48492812-48492831 | Msa1251910:intron | 25.0% |
| ! | GCAAAGTTGAATGAAAAATT+TGG | - | chr8_2:48493212-48493231 | Msa1251910:intron | 25.0% |
| !!! | ATAGACTGTTTTTGTTTCTT+TGG | + | chr8_2:48493323-48493342 | None:intergenic | 25.0% |
| ! | TTGATTGCTTTGTTCTAATG+TGG | + | chr8_2:48489972-48489991 | None:intergenic | 30.0% |
| AACAAAGCAATCAAAATGGA+TGG | - | chr8_2:48489978-48489997 | Msa1251910:CDS | 30.0% | |
| TTCGTATGGAAAAAAAATCG+AGG | - | chr8_2:48490153-48490172 | Msa1251910:CDS | 30.0% | |
| TATGGAAAAAAAATCGAGGA+AGG | - | chr8_2:48490157-48490176 | Msa1251910:CDS | 30.0% | |
| ! | AAAAACGAGCAGTAAGTTTT+TGG | - | chr8_2:48490193-48490212 | Msa1251910:CDS | 30.0% |
| CATATTAAGTATGGAGAAGA+TGG | - | chr8_2:48490360-48490379 | Msa1251910:CDS | 30.0% | |
| CCAATATGGTAATAGGTTAT+GGG | + | chr8_2:48490427-48490446 | None:intergenic | 30.0% | |
| ACCAATATGGTAATAGGTTA+TGG | + | chr8_2:48490428-48490447 | None:intergenic | 30.0% | |
| TACACAACCAATATGGTAAT+AGG | + | chr8_2:48490434-48490453 | None:intergenic | 30.0% | |
| TAACAAGTACACAACCAATA+TGG | + | chr8_2:48490441-48490460 | None:intergenic | 30.0% | |
| ! | TTTAAAGCTTCTAGAAGAAG+AGG | - | chr8_2:48490532-48490551 | Msa1251910:CDS | 30.0% |
| ! | TTAAAGCTTCTAGAAGAAGA+GGG | - | chr8_2:48490533-48490552 | Msa1251910:CDS | 30.0% |
| GAGCAGAAATGTATTACAAA+AGG | - | chr8_2:48490573-48490592 | Msa1251910:CDS | 30.0% | |
| TCAACAAAGTTTATTAGCTC+TGG | + | chr8_2:48490602-48490621 | None:intergenic | 30.0% | |
| !!! | ACATTTGGTTTTAATCCATC+TGG | + | chr8_2:48490785-48490804 | None:intergenic | 30.0% |
| ! | AAATCTTTTAGTGGAGTCTT+TGG | + | chr8_2:48490818-48490837 | None:intergenic | 30.0% |
| TTTCTACTCAATCCTGATTT+AGG | + | chr8_2:48490920-48490939 | None:intergenic | 30.0% | |
| !! | TGTTAATGTTATTGATGACG+AGG | - | chr8_2:48491117-48491136 | Msa1251910:CDS | 30.0% |
| AAATTGAGTCCAAAAGAGTA+AGG | - | chr8_2:48491236-48491255 | Msa1251910:CDS | 30.0% | |
| AATTGAGTCCAAAAGAGTAA+GGG | - | chr8_2:48491237-48491256 | Msa1251910:CDS | 30.0% | |
| ! | ACTTCTTTTACATCTCGTTT+CGG | + | chr8_2:48491334-48491353 | None:intergenic | 30.0% |
| AAAAGAAGTAACAGGAACAA+AGG | - | chr8_2:48491345-48491364 | Msa1251910:CDS | 30.0% | |
| GAAGATTAAAGAACATTTCG+AGG | - | chr8_2:48491429-48491448 | Msa1251910:CDS | 30.0% | |
| ! | TGAAGTATTTCAAACAGAAG+AGG | - | chr8_2:48491828-48491847 | Msa1251910:CDS | 30.0% |
| ATTGGAAAATGAAGTCCAAA+AGG | - | chr8_2:48491984-48492003 | Msa1251910:CDS | 30.0% | |
| TGTGATTTAACGTCATGTTT+CGG | + | chr8_2:48492081-48492100 | None:intergenic | 30.0% | |
| GCCAAAATCTTATTGAATGA+TGG | - | chr8_2:48492117-48492136 | Msa1251910:CDS | 30.0% | |
| AAAAGAAGAAACAATCTCAG+TGG | - | chr8_2:48492203-48492222 | Msa1251910:CDS | 30.0% | |
| TCTCTTTCTTTCAACACTAT+AGG | + | chr8_2:48492240-48492259 | None:intergenic | 30.0% | |
| !! | TACTTTTAAAGAAGATTCCG+AGG | - | chr8_2:48492356-48492375 | Msa1251910:CDS | 30.0% |
| !!! | ATGCTTTGCTTTTAGAGTAT+AGG | - | chr8_2:48492403-48492422 | Msa1251910:CDS | 30.0% |
| ! | TCAATAACATGATTTTCTGG+TGG | + | chr8_2:48492645-48492664 | None:intergenic | 30.0% |
| ACCAGAAAATCATGTTATTG+AGG | - | chr8_2:48492644-48492663 | Msa1251910:CDS | 30.0% | |
| ! | TCCTCAATAACATGATTTTC+TGG | + | chr8_2:48492648-48492667 | None:intergenic | 30.0% |
| ! | TGTTTCGTATTTCTGTATCT+CGG | + | chr8_2:48492790-48492809 | None:intergenic | 30.0% |
| TTCAAAATGAACTCACACTA+TGG | - | chr8_2:48492937-48492956 | Msa1251910:intron | 30.0% | |
| ! | AGTCTATCTTTTCAATGCAT+AGG | - | chr8_2:48493336-48493355 | Msa1251910:CDS | 30.0% |
| AGGAGAAAAAATAACCTTGG+AGG | + | chr8_2:48490011-48490030 | None:intergenic | 35.0% | |
| AAGAGAATTGCTCTTTCGTA+TGG | - | chr8_2:48490139-48490158 | Msa1251910:CDS | 35.0% | |
| ! | AAGAGATTTGCTCTTTCGTA+CGG | - | chr8_2:48490220-48490239 | Msa1251910:CDS | 35.0% |
| CCCATAACCTATTACCATAT+TGG | - | chr8_2:48490424-48490443 | Msa1251910:CDS | 35.0% | |
| CAGAATGAAATGTGCAGATA+TGG | - | chr8_2:48490490-48490509 | Msa1251910:CDS | 35.0% | |
| AATGAAATGTGCAGATATGG+AGG | - | chr8_2:48490493-48490512 | Msa1251910:CDS | 35.0% | |
| TCCAGATAGAGTTCCTTATA+TGG | - | chr8_2:48490715-48490734 | Msa1251910:CDS | 35.0% | |
| TCCATATAAGGAACTCTATC+TGG | + | chr8_2:48490719-48490738 | None:intergenic | 35.0% | |
| ! | AATCCATCTGGCATTTTTCT+TGG | + | chr8_2:48490773-48490792 | None:intergenic | 35.0% |
| CTTGTTACTGAATTTCCTTG+TGG | + | chr8_2:48490867-48490886 | None:intergenic | 35.0% | |
| AATCCTGATTTAGGAGCTTT+AGG | + | chr8_2:48490911-48490930 | None:intergenic | 35.0% | |
| TAGAAAGCAAGCAATTGAAG+AGG | - | chr8_2:48490934-48490953 | Msa1251910:CDS | 35.0% | |
| AGTTTCCCAATATCTAGCAA+TGG | + | chr8_2:48491032-48491051 | None:intergenic | 35.0% | |
| !! | TAATGTTATTGATGACGAGG+AGG | - | chr8_2:48491120-48491139 | Msa1251910:CDS | 35.0% |
| CAAAAGAGTAAGGGAAGTAA+GGG | - | chr8_2:48491246-48491265 | Msa1251910:CDS | 35.0% | |
| CGAGATGTAAAAGAAGTAAC+AGG | - | chr8_2:48491337-48491356 | Msa1251910:CDS | 35.0% | |
| AAAGGATTTGAGTGAAGATG+TGG | - | chr8_2:48491363-48491382 | Msa1251910:CDS | 35.0% | |
| ATTAAAGAACATTTCGAGGC+TGG | - | chr8_2:48491433-48491452 | Msa1251910:CDS | 35.0% | |
| !! | TTTTTCTGCCATTTCTGTCA+CGG | + | chr8_2:48491476-48491495 | None:intergenic | 35.0% |
| AGTTTCTTCTCAAACAGCAT+TGG | - | chr8_2:48491537-48491556 | Msa1251910:CDS | 35.0% | |
| ! | AACTTTCCTTTTCCGTTTCA+AGG | + | chr8_2:48491612-48491631 | None:intergenic | 35.0% |
| TGAAACGGAAAAGGAAAGTT+TGG | - | chr8_2:48491612-48491631 | Msa1251910:CDS | 35.0% | |
| GAACGAGAAACTTAGAGAAA+TGG | - | chr8_2:48491654-48491673 | Msa1251910:CDS | 35.0% | |
| ACTTAGAGAAATGGACGAAA+TGG | - | chr8_2:48491663-48491682 | Msa1251910:CDS | 35.0% | |
| TGTTCTGATCTTCAACAACT+TGG | + | chr8_2:48491711-48491730 | None:intergenic | 35.0% | |
| TCTCTCTGATAAAGTCCAAA+AGG | - | chr8_2:48491777-48491796 | Msa1251910:CDS | 35.0% | |
| ! | TGATGATGCAAAGTCCAATA+CGG | - | chr8_2:48491951-48491970 | Msa1251910:CDS | 35.0% |
| ! | TGATGGTGAAAAGTCCAATA+CGG | - | chr8_2:48492134-48492153 | Msa1251910:CDS | 35.0% |
| CAATGAATAAATGGCCGTAT+TGG | + | chr8_2:48492151-48492170 | None:intergenic | 35.0% | |
| CAATACGGCCATTTATTCAT+TGG | - | chr8_2:48492149-48492168 | Msa1251910:CDS | 35.0% | |
| TGATGCTGGAAATCATGAAA+AGG | - | chr8_2:48492302-48492321 | Msa1251910:CDS | 35.0% | |
| ! | AAGTCTTTTGCAGAAAAGCT+TGG | - | chr8_2:48492581-48492600 | Msa1251910:CDS | 35.0% |
| TTGGAGGGAAATGAAGAAAT+CGG | - | chr8_2:48492600-48492619 | Msa1251910:CDS | 35.0% | |
| TGTTGAAGAGAAGTTTAGGA+TGG | - | chr8_2:48492704-48492723 | Msa1251910:CDS | 35.0% | |
| ! | GTTGAAGAGAAGTTTAGGAT+GGG | - | chr8_2:48492705-48492724 | Msa1251910:CDS | 35.0% |
| ! | TAGAGGAGAATCTAGAATTC+TGG | - | chr8_2:48492742-48492761 | Msa1251910:CDS | 35.0% |
| TATCGAAGCTCGAAACAAAA+TGG | - | chr8_2:48492835-48492854 | Msa1251910:intron | 35.0% | |
| ACAAAATGGAAAGCAACAGA+AGG | - | chr8_2:48492849-48492868 | Msa1251910:intron | 35.0% | |
| ! | GTTCATTTTGAATCTCTGCA+AGG | + | chr8_2:48492929-48492948 | None:intergenic | 35.0% |
| ATGCTGTTGTTATCTCTTCT+TGG | + | chr8_2:48493025-48493044 | None:intergenic | 35.0% | |
| TATAATGCTGCGAAATTCCA+AGG | - | chr8_2:48493086-48493105 | Msa1251910:intron | 35.0% | |
| TCATATTCAAAACCTCTCCT+TGG | + | chr8_2:48493106-48493125 | None:intergenic | 35.0% | |
| TAAATGACCTTAGAGGAACA+CGG | + | chr8_2:48493286-48493305 | None:intergenic | 35.0% | |
| CCAAAGATAAATGACCTTAG+AGG | + | chr8_2:48493293-48493312 | None:intergenic | 35.0% | |
| !! | CCTCTAAGGTCATTTATCTT+TGG | - | chr8_2:48493290-48493309 | Msa1251910:CDS | 35.0% |
| CTGCAAGCAATGCTTATTCA+TGG | - | chr8_2:48489935-48489954 | Msa1251910:CDS | 40.0% | |
| CAAGCAATGCTTATTCATGG+TGG | - | chr8_2:48489938-48489957 | Msa1251910:CDS | 40.0% | |
| CAATGCTTATTCATGGTGGT+GGG | - | chr8_2:48489942-48489961 | Msa1251910:CDS | 40.0% | |
| ! | TTGCTTTGTTCTAATGTGGC+TGG | + | chr8_2:48489968-48489987 | None:intergenic | 40.0% |
| !! | AAAAATCGAGGAAGGTGTCA+TGG | - | chr8_2:48490165-48490184 | Msa1251910:CDS | 40.0% |
| ! | AGAGATTTGCTCTTTCGTAC+GGG | - | chr8_2:48490221-48490240 | Msa1251910:CDS | 40.0% |
| TGGGAACATTTGATGTGTTG+TGG | + | chr8_2:48490408-48490427 | None:intergenic | 40.0% | |
| TGACAAGTGATCGTACCTAT+CGG | + | chr8_2:48490654-48490673 | None:intergenic | 40.0% | |
| TCGTCGTCTTCATCCATATA+AGG | + | chr8_2:48490731-48490750 | None:intergenic | 40.0% | |
| ! | TTTGGAGCTTTCGGAACATT+TGG | + | chr8_2:48490800-48490819 | None:intergenic | 40.0% |
| ACTCCTAAAGCTCCTAAATC+AGG | - | chr8_2:48490905-48490924 | Msa1251910:CDS | 40.0% | |
| TGCTAGATATTGGGAAACTG+AGG | - | chr8_2:48491033-48491052 | Msa1251910:CDS | 40.0% | |
| GCTAGATATTGGGAAACTGA+GGG | - | chr8_2:48491034-48491053 | Msa1251910:CDS | 40.0% | |
| TCCAATTTGCAAGACGAACT+CGG | - | chr8_2:48491085-48491104 | Msa1251910:CDS | 40.0% | |
| ! | CCTTACTTCCCTTACTCTTT+TGG | + | chr8_2:48491248-48491267 | None:intergenic | 40.0% |
| CCAAAAGAGTAAGGGAAGTA+AGG | - | chr8_2:48491245-48491264 | Msa1251910:CDS | 40.0% | |
| ATCAAGACTACAATGCGCTT+CGG | + | chr8_2:48491755-48491774 | None:intergenic | 40.0% | |
| CAATGAATCAATGGCCGTAT+TGG | + | chr8_2:48491968-48491987 | None:intergenic | 40.0% | |
| !! | CAATACGGCCATTGATTCAT+TGG | - | chr8_2:48491966-48491985 | Msa1251910:CDS | 40.0% |
| !! | TACAGTTGTTGCTTTCTCCT+CGG | + | chr8_2:48492376-48492395 | None:intergenic | 40.0% |
| ACTCTTTGAGTCATCATTGC+AGG | - | chr8_2:48492494-48492513 | Msa1251910:CDS | 40.0% | |
| TCGAATCTCTTCGTCTTTCA+CGG | + | chr8_2:48492544-48492563 | None:intergenic | 40.0% | |
| ! | TCTTTTGCAGAAAAGCTTGG+AGG | - | chr8_2:48492584-48492603 | Msa1251910:CDS | 40.0% |
| ! | CTTTTGCAGAAAAGCTTGGA+GGG | - | chr8_2:48492585-48492604 | Msa1251910:CDS | 40.0% |
| ! | TCAACAGCAGAAGTTGATTC+TGG | + | chr8_2:48492690-48492709 | None:intergenic | 40.0% |
| CTGCTGTTGAAGAGAAGTTT+AGG | - | chr8_2:48492700-48492719 | Msa1251910:CDS | 40.0% | |
| ! | TCTGCAAGGTGCTTATAAAG+TGG | + | chr8_2:48492915-48492934 | None:intergenic | 40.0% |
| AAATGAACTCACACTATGGC+TGG | - | chr8_2:48492941-48492960 | Msa1251910:intron | 40.0% | |
| TCTTCAACTTGATGCTGAGA+AGG | - | chr8_2:48493184-48493203 | Msa1251910:intron | 40.0% | |
| GCAATGCTTATTCATGGTGG+TGG | - | chr8_2:48489941-48489960 | Msa1251910:CDS | 45.0% | |
| TGGATGGAACAAAACCTCCA+AGG | - | chr8_2:48489994-48490013 | Msa1251910:CDS | 45.0% | |
| CATACCGATCTTTAGCCGAT+AGG | - | chr8_2:48490636-48490655 | Msa1251910:CDS | 45.0% | |
| ! | CGTACCTATCGGCTAAAGAT+CGG | + | chr8_2:48490643-48490662 | None:intergenic | 45.0% |
| GACAGACGCAATTGTGTTGT+TGG | + | chr8_2:48490693-48490712 | None:intergenic | 45.0% | |
| ! | CCATCTGGCATTTTTCTTGG+TGG | + | chr8_2:48490770-48490789 | None:intergenic | 45.0% |
| CCACCAAGAAAAATGCCAGA+TGG | - | chr8_2:48490767-48490786 | Msa1251910:CDS | 45.0% | |
| !! | AGTGGAGTCTTTGGAGCTTT+CGG | + | chr8_2:48490809-48490828 | None:intergenic | 45.0% |
| ACCGAGTTCGTCTTGCAAAT+TGG | + | chr8_2:48491089-48491108 | None:intergenic | 45.0% | |
| GCAAACGTGACAATGCTTCT+TGG | + | chr8_2:48491183-48491202 | None:intergenic | 45.0% | |
| GTCACGTTTGCAAGAGAAAC+AGG | - | chr8_2:48491192-48491211 | Msa1251910:CDS | 45.0% | |
| AATCCAATTCGCAAAAGCCG+AGG | - | chr8_2:48491308-48491327 | Msa1251910:CDS | 45.0% | |
| TTTACATCTCGTTTCGGCCT+CGG | + | chr8_2:48491328-48491347 | None:intergenic | 45.0% | |
| ! | TTTCGAGGCTGGCTCAAATT+CGG | - | chr8_2:48491444-48491463 | Msa1251910:CDS | 45.0% |
| ! | GGCTTTAACCGTGACAGAAA+TGG | - | chr8_2:48491465-48491484 | Msa1251910:CDS | 45.0% |
| AACTGATGAACTCCATTCGC+TGG | - | chr8_2:48491579-48491598 | Msa1251910:CDS | 45.0% | |
| TCGCAACCTTGAAACGGAAA+AGG | - | chr8_2:48491603-48491622 | Msa1251910:CDS | 45.0% | |
| !! | TGATTTTCTGGTGGCTGCAA+AGG | + | chr8_2:48492636-48492655 | None:intergenic | 45.0% |
| TTGCTGATGAGCTTCAAGCT+GGG | - | chr8_2:48493144-48493163 | Msa1251910:intron | 45.0% | |
| ! | AGGTCTCATCTGGTTTCTCT+TGG | + | chr8_2:48493249-48493268 | None:intergenic | 45.0% |
| GAGAAACCAGATGAGACCTT+CGG | - | chr8_2:48493250-48493269 | Msa1251910:intron | 45.0% | |
| CGGCTAAAGATCGGTATGCA+CGG | + | chr8_2:48490634-48490653 | None:intergenic | 50.0% | |
| !! | GGCATTTTTCTTGGTGGCCT+TGG | + | chr8_2:48490764-48490783 | None:intergenic | 50.0% |
| TAACTACAGCGACAGCCACA+AGG | - | chr8_2:48490849-48490868 | Msa1251910:CDS | 50.0% | |
| GGAAACTGAGGGACAGATCA+AGG | - | chr8_2:48491045-48491064 | Msa1251910:CDS | 50.0% | |
| ! | TTGCAAGACGAACTCGGTGA+AGG | - | chr8_2:48491091-48491110 | Msa1251910:CDS | 50.0% |
| !! | GCTGGTTCGCAACCTTGAAA+CGG | - | chr8_2:48491597-48491616 | Msa1251910:CDS | 50.0% |
| ! | CCTCGTCTGGTATCACCTTT+TGG | + | chr8_2:48491795-48491814 | None:intergenic | 50.0% |
| CCAAAAGGTGATACCAGACG+AGG | - | chr8_2:48491792-48491811 | Msa1251910:CDS | 50.0% | |
| GATACCAGACGAGGACGATA+TGG | - | chr8_2:48491801-48491820 | Msa1251910:CDS | 50.0% | |
| ! | CCTCGTTCGGTATCACCTTT+TGG | + | chr8_2:48492002-48492021 | None:intergenic | 50.0% |
| CCAAAAGGTGATACCGAACG+AGG | - | chr8_2:48491999-48492018 | Msa1251910:CDS | 50.0% | |
| AAAGGTGATACCGAACGAGG+AGG | - | chr8_2:48492002-48492021 | Msa1251910:CDS | 50.0% | |
| GATACCGAACGAGGAGGATA+AGG | - | chr8_2:48492008-48492027 | Msa1251910:CDS | 50.0% | |
| CTCACCTTATCCTCCTCGTT+CGG | + | chr8_2:48492015-48492034 | None:intergenic | 50.0% | |
| !! | TTTTCTGGTGGCTGCAAAGG+AGG | + | chr8_2:48492633-48492652 | None:intergenic | 50.0% |
| GGGAATCGACGAACTTCTAG+AGG | - | chr8_2:48492725-48492744 | Msa1251910:CDS | 50.0% | |
| TGCTGCGAAATTCCAAGGAG+AGG | - | chr8_2:48493091-48493110 | Msa1251910:intron | 50.0% | |
| GTTGCTGATGAGCTTCAAGC+TGG | - | chr8_2:48493143-48493162 | Msa1251910:intron | 50.0% | |
| TCGAATCCGAAGGTCTCATC+TGG | + | chr8_2:48493259-48493278 | None:intergenic | 50.0% | |
| ACACGGTTCTTCGAATCCGA+AGG | + | chr8_2:48493269-48493288 | None:intergenic | 50.0% | |
| CGAAGAACCGTGTTCCTCTA+AGG | - | chr8_2:48493276-48493295 | Msa1251910:intron | 50.0% | |
| ! | ACGACGACGAAGCATCACCA+AGG | - | chr8_2:48490744-48490763 | Msa1251910:CDS | 55.0% |
| ! | TCGCCGTTTGATGGCAGAAG+CGG | - | chr8_2:48491144-48491163 | Msa1251910:CDS | 55.0% |
| GAGCCGCTTCTGCCATCAAA+CGG | + | chr8_2:48491150-48491169 | None:intergenic | 55.0% | |
| CAAGGTTGCGAACCAGCGAA+TGG | + | chr8_2:48491594-48491613 | None:intergenic | 55.0% | |
| CTCACCATATCGTCCTCGTC+TGG | + | chr8_2:48491808-48491827 | None:intergenic | 55.0% | |
| GGAAAACAGCGCGTTGCTGA+AGG | - | chr8_2:48492962-48492981 | Msa1251910:intron | 55.0% | |
| ! | CGGCCTCGGCTTTTGCGAAT+TGG | + | chr8_2:48491314-48491333 | None:intergenic | 60.0% |
| CGAGGAGGCTCGCCGTTTGA+TGG | - | chr8_2:48491135-48491154 | Msa1251910:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 48489922 | 48493379 | 48489922 | ID=Msa1251910;Name=Msa1251910 |
| chr8_2 | mRNA | 48489922 | 48493379 | 48489922 | ID=Msa1251910-mRNA-1;Parent=Msa1251910;Name=Msa1251910-mRNA-1;_AED=0.00;_eAED=0.01;_QI=0|0|0|1|0|0|2|0|988 |
| chr8_2 | exon | 48493286 | 48493379 | 48493286 | ID=Msa1251910-mRNA-1:exon:14668;Parent=Msa1251910-mRNA-1 |
| chr8_2 | exon | 48489922 | 48492794 | 48489922 | ID=Msa1251910-mRNA-1:exon:14667;Parent=Msa1251910-mRNA-1 |
| chr8_2 | CDS | 48493286 | 48493379 | 48493286 | ID=Msa1251910-mRNA-1:cds;Parent=Msa1251910-mRNA-1 |
| chr8_2 | CDS | 48489922 | 48492794 | 48489922 | ID=Msa1251910-mRNA-1:cds;Parent=Msa1251910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
