Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116610 | XP_003625289.1 | 97.518 | 282 | 7 | 0 | 1 | 282 | 1 | 282 | 0.0 | 574 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116610 | sp|Q38910|XTH23_ARATH | 75.000 | 280 | 67 | 2 | 3 | 279 | 4 | 283 | 1.85e-158 | 446 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116610 | G7KW97 | 97.518 | 282 | 7 | 0 | 1 | 282 | 1 | 282 | 0.0 | 574 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0374040 | Msa1116610 | 0.800514 | 1.390780e-48 | -8.615850e-47 |
| Msa1035450 | Msa1116610 | 0.819724 | 9.995237e-53 | -8.615850e-47 |
| Msa1075320 | Msa1116610 | 0.851267 | 9.922469e-61 | -8.615850e-47 |
| Msa0267400 | Msa1116610 | 0.825843 | 3.757715e-54 | -8.615850e-47 |
| Msa1116610 | Msa1162750 | 0.842213 | 2.966372e-58 | -8.615850e-47 |
| Msa1116610 | Msa1221290 | 0.820664 | 6.087125e-53 | -8.615850e-47 |
| Msa1116610 | Msa1337450 | 0.819837 | 9.415765e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116610 | MtrunA17_Chr7g0258911 | 97.518 | 282 | 7 | 0 | 1 | 282 | 1 | 282 | 0.0 | 574 |
| Msa1116610 | MtrunA17_Chr4g0072611 | 92.933 | 283 | 19 | 1 | 1 | 282 | 1 | 283 | 0.0 | 546 |
| Msa1116610 | MtrunA17_Chr4g0072671 | 85.932 | 263 | 33 | 2 | 21 | 279 | 23 | 285 | 6.53e-167 | 465 |
| Msa1116610 | MtrunA17_Chr4g0072601 | 75.273 | 275 | 67 | 1 | 6 | 279 | 9 | 283 | 1.14e-155 | 436 |
| Msa1116610 | MtrunA17_Chr4g0071341 | 77.528 | 267 | 59 | 1 | 16 | 281 | 17 | 283 | 1.18e-152 | 429 |
| Msa1116610 | MtrunA17_Chr2g0299061 | 71.841 | 277 | 73 | 1 | 8 | 279 | 10 | 286 | 1.91e-148 | 418 |
| Msa1116610 | MtrunA17_Chr3g0122021 | 73.529 | 272 | 64 | 2 | 10 | 280 | 14 | 278 | 9.24e-145 | 409 |
| Msa1116610 | MtrunA17_Chr3g0122031 | 73.529 | 272 | 64 | 2 | 10 | 280 | 14 | 278 | 9.44e-145 | 409 |
| Msa1116610 | MtrunA17_Chr8g0377841 | 70.397 | 277 | 77 | 1 | 3 | 279 | 10 | 281 | 1.52e-142 | 403 |
| Msa1116610 | MtrunA17_Chr4g0072681 | 81.279 | 219 | 36 | 1 | 66 | 279 | 25 | 243 | 5.71e-131 | 372 |
| Msa1116610 | MtrunA17_Chr8g0389641 | 63.100 | 271 | 58 | 1 | 10 | 280 | 15 | 243 | 2.36e-123 | 353 |
| Msa1116610 | MtrunA17_Chr5g0443391 | 54.579 | 273 | 119 | 2 | 8 | 280 | 12 | 279 | 8.99e-107 | 312 |
| Msa1116610 | MtrunA17_Chr6g0486581 | 53.237 | 278 | 123 | 3 | 6 | 279 | 9 | 283 | 1.27e-104 | 307 |
| Msa1116610 | MtrunA17_Chr3g0096651 | 55.172 | 261 | 112 | 2 | 21 | 280 | 27 | 283 | 1.42e-103 | 304 |
| Msa1116610 | MtrunA17_Chr6g0461731 | 53.546 | 282 | 117 | 4 | 9 | 279 | 32 | 310 | 1.61e-101 | 300 |
| Msa1116610 | MtrunA17_Chr6g0461761 | 53.103 | 290 | 122 | 4 | 1 | 279 | 1 | 287 | 1.90e-101 | 299 |
| Msa1116610 | MtrunA17_Chr7g0252601 | 51.546 | 291 | 127 | 4 | 1 | 280 | 1 | 288 | 2.07e-101 | 299 |
| Msa1116610 | MtrunA17_Chr7g0252621 | 52.234 | 291 | 125 | 4 | 1 | 280 | 1 | 288 | 2.91e-101 | 298 |
| Msa1116610 | MtrunA17_Chr7g0252631 | 55.769 | 260 | 109 | 3 | 24 | 280 | 32 | 288 | 7.50e-101 | 298 |
| Msa1116610 | MtrunA17_Chr4g0023961 | 49.485 | 291 | 130 | 6 | 7 | 287 | 10 | 293 | 7.90e-100 | 295 |
| Msa1116610 | MtrunA17_Chr2g0323161 | 50.000 | 278 | 127 | 4 | 16 | 284 | 17 | 291 | 7.27e-98 | 290 |
| Msa1116610 | MtrunA17_Chr4g0054451 | 49.104 | 279 | 133 | 6 | 6 | 279 | 15 | 289 | 3.69e-97 | 288 |
| Msa1116610 | MtrunA17_Chr1g0206681 | 49.110 | 281 | 141 | 1 | 3 | 281 | 13 | 293 | 3.73e-97 | 288 |
| Msa1116610 | MtrunA17_Chr4g0054431 | 49.281 | 278 | 132 | 6 | 6 | 279 | 15 | 287 | 1.81e-96 | 286 |
| Msa1116610 | MtrunA17_Chr1g0206081 | 47.119 | 295 | 140 | 5 | 2 | 282 | 5 | 297 | 3.44e-90 | 271 |
| Msa1116610 | MtrunA17_Chr8g0390201 | 55.779 | 199 | 82 | 3 | 89 | 282 | 15 | 212 | 1.19e-74 | 228 |
| Msa1116610 | MtrunA17_Chr8g0340001 | 45.570 | 237 | 118 | 5 | 48 | 279 | 1 | 231 | 7.20e-68 | 211 |
| Msa1116610 | MtrunA17_Chr4g0072641 | 75.397 | 126 | 17 | 1 | 154 | 279 | 37 | 148 | 8.76e-65 | 201 |
| Msa1116610 | MtrunA17_Chr4g0028221 | 41.045 | 268 | 141 | 7 | 20 | 279 | 46 | 304 | 5.65e-63 | 201 |
| Msa1116610 | MtrunA17_Chr7g0264731 | 40.755 | 265 | 140 | 7 | 23 | 279 | 36 | 291 | 1.16e-61 | 197 |
| Msa1116610 | MtrunA17_Chr2g0327411 | 40.520 | 269 | 144 | 8 | 19 | 279 | 49 | 309 | 3.02e-60 | 194 |
| Msa1116610 | MtrunA17_Chr1g0180451 | 40.000 | 265 | 142 | 6 | 23 | 279 | 39 | 294 | 3.58e-60 | 194 |
| Msa1116610 | MtrunA17_Chr2g0303861 | 39.310 | 290 | 154 | 11 | 1 | 280 | 1 | 278 | 1.50e-59 | 192 |
| Msa1116610 | MtrunA17_Chr8g0375981 | 35.099 | 302 | 177 | 8 | 1 | 287 | 1 | 298 | 3.63e-57 | 187 |
| Msa1116610 | MtrunA17_Chr2g0303721 | 38.754 | 289 | 149 | 10 | 1 | 276 | 1 | 274 | 1.06e-56 | 184 |
| Msa1116610 | MtrunA17_Chr1g0161951 | 39.474 | 266 | 144 | 8 | 24 | 279 | 33 | 291 | 3.97e-55 | 182 |
| Msa1116610 | MtrunA17_Chr7g0235541 | 45.161 | 217 | 105 | 6 | 71 | 281 | 1 | 209 | 2.80e-54 | 176 |
| Msa1116610 | MtrunA17_Chr8g0365231 | 35.664 | 286 | 165 | 8 | 6 | 280 | 34 | 311 | 8.14e-51 | 170 |
| Msa1116610 | MtrunA17_Chr5g0410621 | 34.572 | 269 | 162 | 6 | 24 | 281 | 42 | 307 | 2.28e-50 | 170 |
| Msa1116610 | MtrunA17_Chr8g0382041 | 35.036 | 274 | 147 | 10 | 24 | 279 | 34 | 294 | 1.13e-43 | 152 |
| Msa1116610 | MtrunA17_Chr4g0072631 | 64.103 | 78 | 21 | 2 | 1 | 71 | 1 | 78 | 3.93e-26 | 99.8 |
| Msa1116610 | MtrunA17_Chr8g0374231 | 45.283 | 106 | 53 | 3 | 180 | 282 | 1 | 104 | 2.78e-24 | 94.7 |
| Msa1116610 | MtrunA17_Chr8g0390181 | 51.190 | 84 | 39 | 1 | 8 | 91 | 12 | 93 | 1.61e-19 | 82.0 |
| Msa1116610 | MtrunA17_Chr8g0350711 | 33.333 | 174 | 108 | 4 | 46 | 217 | 54 | 221 | 1.39e-15 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116610 | AT4G25810.1 | 75.000 | 280 | 67 | 2 | 3 | 279 | 4 | 283 | 1.88e-159 | 446 |
| Msa1116610 | AT5G57560.1 | 71.685 | 279 | 74 | 2 | 6 | 279 | 3 | 281 | 1.25e-153 | 431 |
| Msa1116610 | AT5G57550.1 | 69.014 | 284 | 77 | 2 | 5 | 280 | 3 | 283 | 1.61e-152 | 429 |
| Msa1116610 | AT4G30270.1 | 69.176 | 279 | 72 | 2 | 1 | 279 | 1 | 265 | 1.59e-146 | 413 |
| Msa1116610 | AT3G23730.1 | 66.431 | 283 | 90 | 2 | 3 | 280 | 5 | 287 | 9.63e-143 | 404 |
| Msa1116610 | AT5G48070.1 | 64.388 | 278 | 92 | 3 | 5 | 279 | 8 | 281 | 2.57e-137 | 390 |
| Msa1116610 | AT5G57530.1 | 68.441 | 263 | 83 | 0 | 19 | 281 | 22 | 284 | 3.80e-137 | 390 |
| Msa1116610 | AT4G14130.1 | 65.357 | 280 | 96 | 1 | 2 | 280 | 6 | 285 | 5.27e-137 | 389 |
| Msa1116610 | AT5G57540.1 | 68.199 | 261 | 83 | 0 | 21 | 281 | 23 | 283 | 2.09e-136 | 388 |
| Msa1116610 | AT4G25820.1 | 68.421 | 266 | 84 | 0 | 16 | 281 | 22 | 287 | 9.42e-136 | 386 |
| Msa1116610 | AT2G18800.1 | 65.141 | 284 | 86 | 4 | 9 | 279 | 13 | 296 | 1.67e-134 | 384 |
| Msa1116610 | AT4G30290.1 | 63.043 | 276 | 95 | 3 | 7 | 279 | 5 | 276 | 9.37e-124 | 355 |
| Msa1116610 | AT1G65310.2 | 65.769 | 260 | 84 | 2 | 21 | 279 | 48 | 303 | 2.09e-123 | 355 |
| Msa1116610 | AT1G65310.1 | 65.769 | 260 | 84 | 2 | 21 | 279 | 26 | 281 | 3.11e-123 | 354 |
| Msa1116610 | AT4G30280.1 | 62.545 | 275 | 96 | 3 | 8 | 279 | 11 | 281 | 9.09e-123 | 353 |
| Msa1116610 | AT5G13870.2 | 53.546 | 282 | 121 | 4 | 6 | 280 | 10 | 288 | 6.93e-102 | 300 |
| Msa1116610 | AT5G13870.1 | 53.546 | 282 | 121 | 4 | 6 | 280 | 10 | 288 | 6.93e-102 | 300 |
| Msa1116610 | AT5G13870.3 | 53.546 | 282 | 121 | 4 | 6 | 280 | 10 | 288 | 6.93e-102 | 300 |
| Msa1116610 | AT4G03210.1 | 48.772 | 285 | 136 | 5 | 6 | 286 | 11 | 289 | 4.24e-98 | 291 |
| Msa1116610 | AT2G06850.1 | 55.000 | 260 | 111 | 3 | 24 | 280 | 35 | 291 | 5.68e-97 | 288 |
| Msa1116610 | AT5G65730.1 | 47.312 | 279 | 141 | 3 | 3 | 280 | 18 | 291 | 1.94e-96 | 286 |
| Msa1116610 | AT2G14620.1 | 47.887 | 284 | 144 | 2 | 1 | 281 | 14 | 296 | 2.49e-95 | 284 |
| Msa1116610 | AT4G28850.1 | 48.399 | 281 | 132 | 4 | 10 | 279 | 9 | 287 | 2.57e-93 | 279 |
| Msa1116610 | AT4G37800.1 | 48.029 | 279 | 137 | 5 | 9 | 283 | 19 | 293 | 1.04e-92 | 277 |
| Msa1116610 | AT2G06850.2 | 57.143 | 231 | 93 | 3 | 53 | 280 | 4 | 231 | 5.18e-91 | 271 |
| Msa1116610 | AT4G03210.2 | 53.061 | 245 | 104 | 5 | 46 | 286 | 24 | 261 | 5.26e-91 | 272 |
| Msa1116610 | AT1G11545.1 | 47.405 | 289 | 132 | 7 | 8 | 282 | 20 | 302 | 2.82e-88 | 266 |
| Msa1116610 | AT4G13090.1 | 45.614 | 285 | 147 | 4 | 2 | 280 | 7 | 289 | 7.64e-83 | 252 |
| Msa1116610 | AT2G14620.2 | 50.870 | 230 | 109 | 2 | 55 | 281 | 18 | 246 | 8.09e-81 | 245 |
| Msa1116610 | AT3G25050.1 | 43.617 | 282 | 147 | 5 | 6 | 279 | 12 | 289 | 1.03e-79 | 244 |
| Msa1116610 | AT2G14620.3 | 51.584 | 221 | 103 | 2 | 64 | 281 | 16 | 235 | 7.89e-79 | 240 |
| Msa1116610 | AT4G13080.1 | 43.007 | 286 | 154 | 4 | 1 | 280 | 10 | 292 | 5.66e-78 | 239 |
| Msa1116610 | AT2G36870.1 | 41.887 | 265 | 137 | 6 | 23 | 279 | 42 | 297 | 1.00e-62 | 201 |
| Msa1116610 | AT3G44990.1 | 42.045 | 264 | 136 | 7 | 24 | 279 | 39 | 293 | 5.68e-60 | 193 |
| Msa1116610 | AT1G32170.1 | 34.122 | 296 | 175 | 8 | 1 | 279 | 1 | 293 | 3.44e-54 | 180 |
| Msa1116610 | AT1G10550.1 | 34.602 | 289 | 164 | 7 | 6 | 279 | 31 | 309 | 2.46e-52 | 174 |
| Msa1116610 | AT1G14720.1 | 35.849 | 265 | 158 | 7 | 23 | 279 | 30 | 290 | 6.56e-52 | 174 |
| Msa1116610 | AT2G01850.1 | 33.333 | 264 | 166 | 6 | 23 | 279 | 30 | 290 | 1.21e-47 | 163 |
| Msa1116610 | AT3G48580.1 | 36.400 | 250 | 141 | 8 | 31 | 279 | 41 | 273 | 3.20e-45 | 155 |
| Msa1116610 | AT4G18990.1 | 33.333 | 288 | 162 | 8 | 24 | 287 | 40 | 321 | 3.53e-45 | 157 |
| Msa1116610 | AT3G48580.3 | 35.242 | 227 | 130 | 7 | 54 | 279 | 4 | 214 | 2.09e-39 | 138 |
| Msa1116610 | AT4G18990.2 | 35.071 | 211 | 112 | 6 | 97 | 287 | 42 | 247 | 1.67e-37 | 135 |
| Msa1116610 | AT2G36870.2 | 45.324 | 139 | 66 | 3 | 23 | 153 | 42 | 178 | 4.92e-31 | 115 |
| Msa1116610 | AT3G48580.2 | 31.200 | 250 | 134 | 9 | 31 | 279 | 41 | 253 | 2.26e-28 | 110 |
Find 79 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGATGTGCTTACATAAT+AGG | 0.234785 | 7_3:+64277277 | None:intergenic |
| GAAATTGACTTTGAATTCTT+AGG | 0.253040 | 7_3:-64277110 | Msa1116610:CDS |
| TGAGAATCTATTCTAGTCTT+TGG | 0.265403 | 7_3:-64276752 | Msa1116610:CDS |
| ATGTTCTTGAATTCTCTAAT+TGG | 0.274937 | 7_3:+64276813 | None:intergenic |
| GTCTTTGGAATGCTGATGAT+TGG | 0.342081 | 7_3:-64276737 | Msa1116610:CDS |
| TTCACACCTATTCCATCCTC+TGG | 0.371800 | 7_3:-64276983 | Msa1116610:CDS |
| AACGCATGTACTGTGTCTTC+TGG | 0.388721 | 7_3:-64276639 | Msa1116610:CDS |
| GTACTTACACAATGCGTTGC+GGG | 0.409476 | 7_3:+64276958 | None:intergenic |
| CTTGACAAATCCTCTGGCTC+TGG | 0.415559 | 7_3:-64277386 | Msa1116610:CDS |
| ACATTGGTATGAAGAATGTA+TGG | 0.415981 | 7_3:+64277071 | None:intergenic |
| TGCTTGGTTCTCAGAGGAGT+TGG | 0.433098 | 7_3:-64276580 | Msa1116610:CDS |
| GATATCACCATCTCCCCATA+TGG | 0.435814 | 7_3:+64276094 | None:intergenic |
| AAGGCCCTGAGGAAATCTTT+TGG | 0.436526 | 7_3:+64276488 | None:intergenic |
| AGACTAGAATAGATTCTCAT+TGG | 0.441045 | 7_3:+64276756 | None:intergenic |
| ATGCAGCTTAAACTCGTTCC+TGG | 0.444564 | 7_3:-64277323 | Msa1116610:CDS |
| TTAATATTGTGGAATCCATA+TGG | 0.445802 | 7_3:-64276109 | Msa1116610:CDS |
| CTCGTTCCTGGCAACTCTGC+TGG | 0.457205 | 7_3:-64277311 | Msa1116610:CDS |
| TAATATTGTGGAATCCATAT+GGG | 0.457278 | 7_3:-64276108 | Msa1116610:CDS |
| TTTCAAACGTATTAATATTG+TGG | 0.467855 | 7_3:-64276120 | Msa1116610:CDS |
| TTGTCCCTTGACAAATCCTC+TGG | 0.468358 | 7_3:-64277392 | Msa1116610:CDS |
| TAGAATAGATTCTCATTGGT+TGG | 0.468992 | 7_3:+64276760 | None:intergenic |
| CGGGTTCCAGAGGATGGAAT+AGG | 0.469680 | 7_3:+64276977 | None:intergenic |
| TCTTTGGAATGCTGATGATT+GGG | 0.473720 | 7_3:-64276736 | Msa1116610:CDS |
| ATGGGGAGATGGTGATATCA+TGG | 0.480940 | 7_3:-64276090 | Msa1116610:CDS |
| CACAGTCTAATAAGAATGCT+TGG | 0.481977 | 7_3:-64276596 | Msa1116610:CDS |
| TGATACCAAAAGATTTCCTC+AGG | 0.490646 | 7_3:-64276493 | Msa1116610:CDS |
| ACGGTTGCAATTGCCTCTGC+TGG | 0.494307 | 7_3:-64277491 | Msa1116610:CDS |
| TTCAAGAACATGGAATCAAA+TGG | 0.495147 | 7_3:-64276801 | Msa1116610:CDS |
| GAGAGCAACAATTCTACCTA+TGG | 0.502278 | 7_3:-64277025 | Msa1116610:CDS |
| CTTAACAAGTCCACCTCTTG+TGG | 0.502433 | 7_3:+64276713 | None:intergenic |
| TTAATTCAGCTATCATCAAA+AGG | 0.502910 | 7_3:-64277146 | Msa1116610:intron |
| GTGGACTTGTTAAGACAGAT+TGG | 0.508499 | 7_3:-64276704 | Msa1116610:CDS |
| AGAAGCAGTGAAAGGAGCAT+TGG | 0.527846 | 7_3:+64276680 | None:intergenic |
| AATGTGTTTAGCCAAGGAAA+AGG | 0.538333 | 7_3:-64277053 | Msa1116610:CDS |
| ATCAAGACTTTGATATAACA+TGG | 0.538583 | 7_3:-64277460 | Msa1116610:CDS |
| AGGTGTGAAAATCCGCAGTT+GGG | 0.542696 | 7_3:+64276997 | None:intergenic |
| ACAGTGCCAGCAGAGTTGCC+AGG | 0.543526 | 7_3:+64277305 | None:intergenic |
| GCGTTGCGGGTTCCAGAGGA+TGG | 0.545929 | 7_3:+64276971 | None:intergenic |
| CCGCAGTTGGGTCAAACCAT+AGG | 0.546848 | 7_3:+64277009 | None:intergenic |
| AGGGCCTTCCTCAAGAATGC+AGG | 0.553967 | 7_3:-64276473 | Msa1116610:CDS |
| TAGGTGTGAAAATCCGCAGT+TGG | 0.555007 | 7_3:+64276996 | None:intergenic |
| TTTCTATAAGAAGCAGTGAA+AGG | 0.555744 | 7_3:+64276672 | None:intergenic |
| CATACCAATGTGTTTAGCCA+AGG | 0.557351 | 7_3:-64277059 | Msa1116610:CDS |
| CAAGGGACAAAGTAAGAAGT+TGG | 0.564881 | 7_3:+64277405 | None:intergenic |
| ATCATCAAAAGGAGGTGCAT+GGG | 0.570048 | 7_3:-64277135 | Msa1116610:CDS |
| CAATGCGTTGCGGGTTCCAG+AGG | 0.572722 | 7_3:+64276967 | None:intergenic |
| TTTGATATAACATGGGGAGA+TGG | 0.574885 | 7_3:-64277452 | Msa1116610:CDS |
| CAAGTCATGAGAGGCTCAAG+TGG | 0.575997 | 7_3:-64276551 | Msa1116610:CDS |
| TAAACCATCCTGCATTCTTG+AGG | 0.578265 | 7_3:+64276465 | None:intergenic |
| TATCATCAAAAGGAGGTGCA+TGG | 0.582020 | 7_3:-64277136 | Msa1116610:CDS |
| CCGTAGAGATTAAAATGACT+AGG | 0.584002 | 7_3:+64277510 | None:intergenic |
| AATTAGAGAATTCAAGAACA+TGG | 0.587989 | 7_3:-64276811 | Msa1116610:CDS |
| GATGATTGGGCCACAAGAGG+TGG | 0.592351 | 7_3:-64276723 | Msa1116610:CDS |
| CCATCCTGCATTCTTGAGGA+AGG | 0.601607 | 7_3:+64276469 | None:intergenic |
| CATTGGTATGAAGAATGTAT+GGG | 0.604051 | 7_3:+64277072 | None:intergenic |
| TCAAGACTTTGATATAACAT+GGG | 0.605851 | 7_3:-64277459 | Msa1116610:CDS |
| TTGATTGAAATTGCCAGCAG+AGG | 0.614098 | 7_3:+64277478 | None:intergenic |
| TGGGGAGATGGTGATATCAT+GGG | 0.614867 | 7_3:-64276089 | Msa1116610:CDS |
| GGATTGAAATCCAGAGCCAG+AGG | 0.618155 | 7_3:+64277376 | None:intergenic |
| GTGGAATCCATATGGGGAGA+TGG | 0.618720 | 7_3:-64276101 | Msa1116610:CDS |
| CAGAGCCAGAGGATTTGTCA+AGG | 0.624689 | 7_3:+64277387 | None:intergenic |
| GCAGACTATACATAAACATG+AGG | 0.624939 | 7_3:-64276147 | Msa1116610:intron |
| AGTACTTACACAATGCGTTG+CGG | 0.624964 | 7_3:+64276957 | None:intergenic |
| GAATTCTTAGGAAACTTGAG+TGG | 0.632192 | 7_3:-64277098 | Msa1116610:CDS |
| AGAGCCAGAGGATTTGTCAA+GGG | 0.648056 | 7_3:+64277388 | None:intergenic |
| GCTGATGATTGGGCCACAAG+AGG | 0.655452 | 7_3:-64276726 | Msa1116610:CDS |
| CCTATGGTTTGACCCAACTG+CGG | 0.657104 | 7_3:-64277009 | Msa1116610:CDS |
| CAAGACTTTGATATAACATG+GGG | 0.657995 | 7_3:-64277458 | Msa1116610:CDS |
| AATATTGTGGAATCCATATG+GGG | 0.662941 | 7_3:-64276107 | Msa1116610:CDS |
| CATTCTTGAGGAAGGCCCTG+AGG | 0.663273 | 7_3:+64276477 | None:intergenic |
| CAGACTATACATAAACATGA+GGG | 0.667134 | 7_3:-64276146 | Msa1116610:CDS |
| TAAGAATGCTTGGTTCTCAG+AGG | 0.671213 | 7_3:-64276586 | Msa1116610:CDS |
| CGTGCTAAAATACTCAACAA+TGG | 0.672548 | 7_3:-64277428 | Msa1116610:CDS |
| AAGTCATGAGAGGCTCAAGT+GGG | 0.675575 | 7_3:-64276550 | Msa1116610:CDS |
| TGGATTCTACAAGTCATGAG+AGG | 0.679866 | 7_3:-64276560 | Msa1116610:CDS |
| CCTTCCTCAAGAATGCAGGA+TGG | 0.683725 | 7_3:-64276469 | Msa1116610:intron |
| ATTCAGCTATCATCAAAAGG+AGG | 0.688497 | 7_3:-64277143 | Msa1116610:intron |
| GATACCAAAAGATTTCCTCA+GGG | 0.691000 | 7_3:-64276492 | Msa1116610:CDS |
| ACTATACATAAACATGAGGG+TGG | 0.697547 | 7_3:-64276143 | Msa1116610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAACTATACATTTTTGTTTA+AGG | - | chr7_3:64276378-64276397 | Msa1116610:intron | 15.0% |
| !!! | TTTTTTTTTAATCATAGTCA+TGG | + | chr7_3:64277317-64277336 | None:intergenic | 15.0% |
| !!! | TAACTATACATTTTTGTTTA+AGG | - | chr7_3:64276378-64276397 | Msa1116610:intron | 15.0% |
| !!! | TTTTTTTTTAATCATAGTCA+TGG | + | chr7_3:64277317-64277336 | None:intergenic | 15.0% |
| !!! | TAAAAGTTCTTTTAACTCAT+TGG | - | chr7_3:64276428-64276447 | Msa1116610:intron | 20.0% |
| !!! | GTTTTTTTTATTACTTGTGT+TGG | - | chr7_3:64276716-64276735 | Msa1116610:CDS | 20.0% |
| !! | TTACAAAAATACAATACGAA+GGG | + | chr7_3:64277202-64277221 | None:intergenic | 20.0% |
| !! | ATTACAAAAATACAATACGA+AGG | + | chr7_3:64277203-64277222 | None:intergenic | 20.0% |
| !! | GAAATAATTTACCATAGAAA+TGG | + | chr7_3:64277272-64277291 | None:intergenic | 20.0% |
| !! | ATGTTTGATTAATCAAACTT+TGG | - | chr7_3:64277443-64277462 | Msa1116610:CDS | 20.0% |
| !! | TTTCAAACGTATTAATATTG+TGG | - | chr7_3:64277492-64277511 | Msa1116610:CDS | 20.0% |
| !!! | TAAAAGTTCTTTTAACTCAT+TGG | - | chr7_3:64276428-64276447 | Msa1116610:intron | 20.0% |
| !!! | GTTTTTTTTATTACTTGTGT+TGG | - | chr7_3:64276716-64276735 | Msa1116610:CDS | 20.0% |
| !! | TTACAAAAATACAATACGAA+GGG | + | chr7_3:64277202-64277221 | None:intergenic | 20.0% |
| !! | ATTACAAAAATACAATACGA+AGG | + | chr7_3:64277203-64277222 | None:intergenic | 20.0% |
| !! | GAAATAATTTACCATAGAAA+TGG | + | chr7_3:64277272-64277291 | None:intergenic | 20.0% |
| !! | ATGTTTGATTAATCAAACTT+TGG | - | chr7_3:64277443-64277462 | Msa1116610:CDS | 20.0% |
| !! | TTTCAAACGTATTAATATTG+TGG | - | chr7_3:64277492-64277511 | Msa1116610:CDS | 20.0% |
| ! | ATCAAGACTTTGATATAACA+TGG | - | chr7_3:64276152-64276171 | Msa1116610:intron | 25.0% |
| ! | TCAAGACTTTGATATAACAT+GGG | - | chr7_3:64276153-64276172 | Msa1116610:intron | 25.0% |
| !! | TCCAAAAATGAATTCCTTTT+TGG | - | chr7_3:64276256-64276275 | Msa1116610:intron | 25.0% |
| ! | ATTTGATGTGCTTACATAAT+AGG | + | chr7_3:64276338-64276357 | None:intergenic | 25.0% |
| ! | TTAATTCAGCTATCATCAAA+AGG | - | chr7_3:64276466-64276485 | Msa1116610:intron | 25.0% |
| !! | GAAATTGACTTTGAATTCTT+AGG | - | chr7_3:64276502-64276521 | Msa1116610:CDS | 25.0% |
| !!! | TTTATTTTTCAGTTTCTCTG+TGG | - | chr7_3:64276768-64276787 | Msa1116610:CDS | 25.0% |
| ! | ATGTTCTTGAATTCTCTAAT+TGG | + | chr7_3:64276802-64276821 | None:intergenic | 25.0% |
| ! | AATTAGAGAATTCAAGAACA+TGG | - | chr7_3:64276801-64276820 | Msa1116610:CDS | 25.0% |
| ! | CTATAAAGAATCCATTTCTA+TGG | - | chr7_3:64277258-64277277 | Msa1116610:intron | 25.0% |
| ! | TTAATATTGTGGAATCCATA+TGG | - | chr7_3:64277503-64277522 | Msa1116610:CDS | 25.0% |
| ! | TAATATTGTGGAATCCATAT+GGG | - | chr7_3:64277504-64277523 | Msa1116610:CDS | 25.0% |
| ! | ATCAAGACTTTGATATAACA+TGG | - | chr7_3:64276152-64276171 | Msa1116610:intron | 25.0% |
| ! | TCAAGACTTTGATATAACAT+GGG | - | chr7_3:64276153-64276172 | Msa1116610:intron | 25.0% |
| !! | TCCAAAAATGAATTCCTTTT+TGG | - | chr7_3:64276256-64276275 | Msa1116610:intron | 25.0% |
| ! | ATTTGATGTGCTTACATAAT+AGG | + | chr7_3:64276338-64276357 | None:intergenic | 25.0% |
| ! | TTAATTCAGCTATCATCAAA+AGG | - | chr7_3:64276466-64276485 | Msa1116610:intron | 25.0% |
| !! | GAAATTGACTTTGAATTCTT+AGG | - | chr7_3:64276502-64276521 | Msa1116610:CDS | 25.0% |
| !!! | TTTATTTTTCAGTTTCTCTG+TGG | - | chr7_3:64276768-64276787 | Msa1116610:CDS | 25.0% |
| ! | ATGTTCTTGAATTCTCTAAT+TGG | + | chr7_3:64276802-64276821 | None:intergenic | 25.0% |
| ! | AATTAGAGAATTCAAGAACA+TGG | - | chr7_3:64276801-64276820 | Msa1116610:CDS | 25.0% |
| ! | CTATAAAGAATCCATTTCTA+TGG | - | chr7_3:64277258-64277277 | Msa1116610:intron | 25.0% |
| ! | TTAATATTGTGGAATCCATA+TGG | - | chr7_3:64277503-64277522 | Msa1116610:CDS | 25.0% |
| ! | TAATATTGTGGAATCCATAT+GGG | - | chr7_3:64277504-64277523 | Msa1116610:CDS | 25.0% |
| !! | CCTAGTCATTTTAATCTCTA+CGG | - | chr7_3:64276102-64276121 | Msa1116610:CDS | 30.0% |
| CAAGACTTTGATATAACATG+GGG | - | chr7_3:64276154-64276173 | Msa1116610:intron | 30.0% | |
| ! | GCCAAAAAGGAATTCATTTT+TGG | + | chr7_3:64276260-64276279 | None:intergenic | 30.0% |
| ! | GCATATCAATTTTGCCAAAA+AGG | + | chr7_3:64276273-64276292 | None:intergenic | 30.0% |
| CATTGGTATGAAGAATGTAT+GGG | + | chr7_3:64276543-64276562 | None:intergenic | 30.0% | |
| ACATTGGTATGAAGAATGTA+TGG | + | chr7_3:64276544-64276563 | None:intergenic | 30.0% | |
| TTCAAGAACATGGAATCAAA+TGG | - | chr7_3:64276811-64276830 | Msa1116610:CDS | 30.0% | |
| !!! | ATTCTCATTGGTTGGTTTTT+GGG | + | chr7_3:64276847-64276866 | None:intergenic | 30.0% |
| TAGAATAGATTCTCATTGGT+TGG | + | chr7_3:64276855-64276874 | None:intergenic | 30.0% | |
| AGACTAGAATAGATTCTCAT+TGG | + | chr7_3:64276859-64276878 | None:intergenic | 30.0% | |
| ! | TGAGAATCTATTCTAGTCTT+TGG | - | chr7_3:64276860-64276879 | Msa1116610:intron | 30.0% |
| TTTCTATAAGAAGCAGTGAA+AGG | + | chr7_3:64276943-64276962 | None:intergenic | 30.0% | |
| ! | AAAAAAAAAAGTGCGACCAA+AGG | - | chr7_3:64277328-64277347 | Msa1116610:CDS | 30.0% |
| CAGACTATACATAAACATGA+GGG | - | chr7_3:64277466-64277485 | Msa1116610:CDS | 30.0% | |
| AATATTGTGGAATCCATATG+GGG | - | chr7_3:64277505-64277524 | Msa1116610:CDS | 30.0% | |
| !! | CCTAGTCATTTTAATCTCTA+CGG | - | chr7_3:64276102-64276121 | Msa1116610:CDS | 30.0% |
| CAAGACTTTGATATAACATG+GGG | - | chr7_3:64276154-64276173 | Msa1116610:intron | 30.0% | |
| ! | GCCAAAAAGGAATTCATTTT+TGG | + | chr7_3:64276260-64276279 | None:intergenic | 30.0% |
| ! | GCATATCAATTTTGCCAAAA+AGG | + | chr7_3:64276273-64276292 | None:intergenic | 30.0% |
| CATTGGTATGAAGAATGTAT+GGG | + | chr7_3:64276543-64276562 | None:intergenic | 30.0% | |
| ACATTGGTATGAAGAATGTA+TGG | + | chr7_3:64276544-64276563 | None:intergenic | 30.0% | |
| TTCAAGAACATGGAATCAAA+TGG | - | chr7_3:64276811-64276830 | Msa1116610:CDS | 30.0% | |
| !!! | ATTCTCATTGGTTGGTTTTT+GGG | + | chr7_3:64276847-64276866 | None:intergenic | 30.0% |
| TAGAATAGATTCTCATTGGT+TGG | + | chr7_3:64276855-64276874 | None:intergenic | 30.0% | |
| AGACTAGAATAGATTCTCAT+TGG | + | chr7_3:64276859-64276878 | None:intergenic | 30.0% | |
| ! | TGAGAATCTATTCTAGTCTT+TGG | - | chr7_3:64276860-64276879 | Msa1116610:intron | 30.0% |
| TTTCTATAAGAAGCAGTGAA+AGG | + | chr7_3:64276943-64276962 | None:intergenic | 30.0% | |
| ! | AAAAAAAAAAGTGCGACCAA+AGG | - | chr7_3:64277328-64277347 | Msa1116610:CDS | 30.0% |
| CAGACTATACATAAACATGA+GGG | - | chr7_3:64277466-64277485 | Msa1116610:CDS | 30.0% | |
| AATATTGTGGAATCCATATG+GGG | - | chr7_3:64277505-64277524 | Msa1116610:CDS | 30.0% | |
| CCGTAGAGATTAAAATGACT+AGG | + | chr7_3:64276105-64276124 | None:intergenic | 35.0% | |
| TTTGATATAACATGGGGAGA+TGG | - | chr7_3:64276160-64276179 | Msa1116610:intron | 35.0% | |
| CGTGCTAAAATACTCAACAA+TGG | - | chr7_3:64276184-64276203 | Msa1116610:intron | 35.0% | |
| ATTCAGCTATCATCAAAAGG+AGG | - | chr7_3:64276469-64276488 | Msa1116610:intron | 35.0% | |
| GAATTCTTAGGAAACTTGAG+TGG | - | chr7_3:64276514-64276533 | Msa1116610:CDS | 35.0% | |
| ! | TTTTCCTTGGCTAAACACAT+TGG | + | chr7_3:64276560-64276579 | None:intergenic | 35.0% |
| AATGTGTTTAGCCAAGGAAA+AGG | - | chr7_3:64276559-64276578 | Msa1116610:CDS | 35.0% | |
| !! | TTTTTCAGTTTCTCTGTGGA+TGG | - | chr7_3:64276772-64276791 | Msa1116610:CDS | 35.0% |
| !!! | TTCTCATTGGTTGGTTTTTG+GGG | + | chr7_3:64276846-64276865 | None:intergenic | 35.0% |
| !!! | GATTCTCATTGGTTGGTTTT+TGG | + | chr7_3:64276848-64276867 | None:intergenic | 35.0% |
| !! | TCTTTGGAATGCTGATGATT+GGG | - | chr7_3:64276876-64276895 | Msa1116610:intron | 35.0% |
| CACAGTCTAATAAGAATGCT+TGG | - | chr7_3:64277016-64277035 | Msa1116610:CDS | 35.0% | |
| TGATACCAAAAGATTTCCTC+AGG | - | chr7_3:64277119-64277138 | Msa1116610:CDS | 35.0% | |
| GATACCAAAAGATTTCCTCA+GGG | - | chr7_3:64277120-64277139 | Msa1116610:CDS | 35.0% | |
| AAATACAATACGAAGGGTTG+AGG | + | chr7_3:64277196-64277215 | None:intergenic | 35.0% | |
| TTGAGTAACTGTAAAGCCTT+TGG | + | chr7_3:64277347-64277366 | None:intergenic | 35.0% | |
| GCAGACTATACATAAACATG+AGG | - | chr7_3:64277465-64277484 | Msa1116610:CDS | 35.0% | |
| ACTATACATAAACATGAGGG+TGG | - | chr7_3:64277469-64277488 | Msa1116610:CDS | 35.0% | |
| CCGTAGAGATTAAAATGACT+AGG | + | chr7_3:64276105-64276124 | None:intergenic | 35.0% | |
| TTTGATATAACATGGGGAGA+TGG | - | chr7_3:64276160-64276179 | Msa1116610:intron | 35.0% | |
| CGTGCTAAAATACTCAACAA+TGG | - | chr7_3:64276184-64276203 | Msa1116610:intron | 35.0% | |
| ATTCAGCTATCATCAAAAGG+AGG | - | chr7_3:64276469-64276488 | Msa1116610:intron | 35.0% | |
| GAATTCTTAGGAAACTTGAG+TGG | - | chr7_3:64276514-64276533 | Msa1116610:CDS | 35.0% | |
| ! | TTTTCCTTGGCTAAACACAT+TGG | + | chr7_3:64276560-64276579 | None:intergenic | 35.0% |
| AATGTGTTTAGCCAAGGAAA+AGG | - | chr7_3:64276559-64276578 | Msa1116610:CDS | 35.0% | |
| !! | TTTTTCAGTTTCTCTGTGGA+TGG | - | chr7_3:64276772-64276791 | Msa1116610:CDS | 35.0% |
| !!! | TTCTCATTGGTTGGTTTTTG+GGG | + | chr7_3:64276846-64276865 | None:intergenic | 35.0% |
| !!! | GATTCTCATTGGTTGGTTTT+TGG | + | chr7_3:64276848-64276867 | None:intergenic | 35.0% |
| !! | TCTTTGGAATGCTGATGATT+GGG | - | chr7_3:64276876-64276895 | Msa1116610:intron | 35.0% |
| CACAGTCTAATAAGAATGCT+TGG | - | chr7_3:64277016-64277035 | Msa1116610:CDS | 35.0% | |
| TGATACCAAAAGATTTCCTC+AGG | - | chr7_3:64277119-64277138 | Msa1116610:CDS | 35.0% | |
| GATACCAAAAGATTTCCTCA+GGG | - | chr7_3:64277120-64277139 | Msa1116610:CDS | 35.0% | |
| AAATACAATACGAAGGGTTG+AGG | + | chr7_3:64277196-64277215 | None:intergenic | 35.0% | |
| TTGAGTAACTGTAAAGCCTT+TGG | + | chr7_3:64277347-64277366 | None:intergenic | 35.0% | |
| GCAGACTATACATAAACATG+AGG | - | chr7_3:64277465-64277484 | Msa1116610:CDS | 35.0% | |
| ACTATACATAAACATGAGGG+TGG | - | chr7_3:64277469-64277488 | Msa1116610:CDS | 35.0% | |
| TTGATTGAAATTGCCAGCAG+AGG | + | chr7_3:64276137-64276156 | None:intergenic | 40.0% | |
| CAAGGGACAAAGTAAGAAGT+TGG | + | chr7_3:64276210-64276229 | None:intergenic | 40.0% | |
| ! | TATCATCAAAAGGAGGTGCA+TGG | - | chr7_3:64276476-64276495 | Msa1116610:CDS | 40.0% |
| ! | ATCATCAAAAGGAGGTGCAT+GGG | - | chr7_3:64276477-64276496 | Msa1116610:CDS | 40.0% |
| CATACCAATGTGTTTAGCCA+AGG | - | chr7_3:64276553-64276572 | Msa1116610:CDS | 40.0% | |
| GAGAGCAACAATTCTACCTA+TGG | - | chr7_3:64276587-64276606 | Msa1116610:CDS | 40.0% | |
| AGTACTTACACAATGCGTTG+CGG | + | chr7_3:64276658-64276677 | None:intergenic | 40.0% | |
| !!! | ATTGGTTGGTTTTTGGGGAA+TGG | + | chr7_3:64276841-64276860 | None:intergenic | 40.0% |
| !! | GTCTTTGGAATGCTGATGAT+TGG | - | chr7_3:64276875-64276894 | Msa1116610:intron | 40.0% |
| !! | GTGGACTTGTTAAGACAGAT+TGG | - | chr7_3:64276908-64276927 | Msa1116610:intron | 40.0% |
| ! | TAAGAATGCTTGGTTCTCAG+AGG | - | chr7_3:64277026-64277045 | Msa1116610:CDS | 40.0% |
| TGGATTCTACAAGTCATGAG+AGG | - | chr7_3:64277052-64277071 | Msa1116610:CDS | 40.0% | |
| TAAACCATCCTGCATTCTTG+AGG | + | chr7_3:64277150-64277169 | None:intergenic | 40.0% | |
| AAGACAATGCTCTACATGTG+TGG | - | chr7_3:64277366-64277385 | Msa1116610:CDS | 40.0% | |
| TTGATTGAAATTGCCAGCAG+AGG | + | chr7_3:64276137-64276156 | None:intergenic | 40.0% | |
| CAAGGGACAAAGTAAGAAGT+TGG | + | chr7_3:64276210-64276229 | None:intergenic | 40.0% | |
| ! | TATCATCAAAAGGAGGTGCA+TGG | - | chr7_3:64276476-64276495 | Msa1116610:CDS | 40.0% |
| ! | ATCATCAAAAGGAGGTGCAT+GGG | - | chr7_3:64276477-64276496 | Msa1116610:CDS | 40.0% |
| CATACCAATGTGTTTAGCCA+AGG | - | chr7_3:64276553-64276572 | Msa1116610:CDS | 40.0% | |
| GAGAGCAACAATTCTACCTA+TGG | - | chr7_3:64276587-64276606 | Msa1116610:CDS | 40.0% | |
| AGTACTTACACAATGCGTTG+CGG | + | chr7_3:64276658-64276677 | None:intergenic | 40.0% | |
| !!! | ATTGGTTGGTTTTTGGGGAA+TGG | + | chr7_3:64276841-64276860 | None:intergenic | 40.0% |
| !! | GTCTTTGGAATGCTGATGAT+TGG | - | chr7_3:64276875-64276894 | Msa1116610:intron | 40.0% |
| !! | GTGGACTTGTTAAGACAGAT+TGG | - | chr7_3:64276908-64276927 | Msa1116610:intron | 40.0% |
| ! | TAAGAATGCTTGGTTCTCAG+AGG | - | chr7_3:64277026-64277045 | Msa1116610:CDS | 40.0% |
| TGGATTCTACAAGTCATGAG+AGG | - | chr7_3:64277052-64277071 | Msa1116610:CDS | 40.0% | |
| TAAACCATCCTGCATTCTTG+AGG | + | chr7_3:64277150-64277169 | None:intergenic | 40.0% | |
| AAGACAATGCTCTACATGTG+TGG | - | chr7_3:64277366-64277385 | Msa1116610:CDS | 40.0% | |
| TTGTCCCTTGACAAATCCTC+TGG | - | chr7_3:64276220-64276239 | Msa1116610:intron | 45.0% | |
| AGAGCCAGAGGATTTGTCAA+GGG | + | chr7_3:64276227-64276246 | None:intergenic | 45.0% | |
| ATGCAGCTTAAACTCGTTCC+TGG | - | chr7_3:64276289-64276308 | Msa1116610:intron | 45.0% | |
| ! | GCTCTCTGTTACCTTTTCCT+TGG | + | chr7_3:64276573-64276592 | None:intergenic | 45.0% |
| AGGTGTGAAAATCCGCAGTT+GGG | + | chr7_3:64276618-64276637 | None:intergenic | 45.0% | |
| TAGGTGTGAAAATCCGCAGT+TGG | + | chr7_3:64276619-64276638 | None:intergenic | 45.0% | |
| TTCACACCTATTCCATCCTC+TGG | - | chr7_3:64276629-64276648 | Msa1116610:CDS | 45.0% | |
| GTACTTACACAATGCGTTGC+GGG | + | chr7_3:64276657-64276676 | None:intergenic | 45.0% | |
| CTTAACAAGTCCACCTCTTG+TGG | + | chr7_3:64276902-64276921 | None:intergenic | 45.0% | |
| ! | AGAAGCAGTGAAAGGAGCAT+TGG | + | chr7_3:64276935-64276954 | None:intergenic | 45.0% |
| AACGCATGTACTGTGTCTTC+TGG | - | chr7_3:64276973-64276992 | Msa1116610:CDS | 45.0% | |
| AAGTCATGAGAGGCTCAAGT+GGG | - | chr7_3:64277062-64277081 | Msa1116610:CDS | 45.0% | |
| ! | AAGGCCCTGAGGAAATCTTT+TGG | + | chr7_3:64277127-64277146 | None:intergenic | 45.0% |
| ! | GTCATGGTCTCTGAGAAAAC+TGG | + | chr7_3:64277301-64277320 | None:intergenic | 45.0% |
| GATATCACCATCTCCCCATA+TGG | + | chr7_3:64277521-64277540 | None:intergenic | 45.0% | |
| ATGGGGAGATGGTGATATCA+TGG | - | chr7_3:64277522-64277541 | Msa1116610:CDS | 45.0% | |
| TGGGGAGATGGTGATATCAT+GGG | - | chr7_3:64277523-64277542 | Msa1116610:CDS | 45.0% | |
| TTGTCCCTTGACAAATCCTC+TGG | - | chr7_3:64276220-64276239 | Msa1116610:intron | 45.0% | |
| AGAGCCAGAGGATTTGTCAA+GGG | + | chr7_3:64276227-64276246 | None:intergenic | 45.0% | |
| ATGCAGCTTAAACTCGTTCC+TGG | - | chr7_3:64276289-64276308 | Msa1116610:intron | 45.0% | |
| ! | GCTCTCTGTTACCTTTTCCT+TGG | + | chr7_3:64276573-64276592 | None:intergenic | 45.0% |
| AGGTGTGAAAATCCGCAGTT+GGG | + | chr7_3:64276618-64276637 | None:intergenic | 45.0% | |
| TAGGTGTGAAAATCCGCAGT+TGG | + | chr7_3:64276619-64276638 | None:intergenic | 45.0% | |
| TTCACACCTATTCCATCCTC+TGG | - | chr7_3:64276629-64276648 | Msa1116610:CDS | 45.0% | |
| GTACTTACACAATGCGTTGC+GGG | + | chr7_3:64276657-64276676 | None:intergenic | 45.0% | |
| CTTAACAAGTCCACCTCTTG+TGG | + | chr7_3:64276902-64276921 | None:intergenic | 45.0% | |
| ! | AGAAGCAGTGAAAGGAGCAT+TGG | + | chr7_3:64276935-64276954 | None:intergenic | 45.0% |
| AACGCATGTACTGTGTCTTC+TGG | - | chr7_3:64276973-64276992 | Msa1116610:CDS | 45.0% | |
| AAGTCATGAGAGGCTCAAGT+GGG | - | chr7_3:64277062-64277081 | Msa1116610:CDS | 45.0% | |
| ! | AAGGCCCTGAGGAAATCTTT+TGG | + | chr7_3:64277127-64277146 | None:intergenic | 45.0% |
| ! | GTCATGGTCTCTGAGAAAAC+TGG | + | chr7_3:64277301-64277320 | None:intergenic | 45.0% |
| GATATCACCATCTCCCCATA+TGG | + | chr7_3:64277521-64277540 | None:intergenic | 45.0% | |
| ATGGGGAGATGGTGATATCA+TGG | - | chr7_3:64277522-64277541 | Msa1116610:CDS | 45.0% | |
| TGGGGAGATGGTGATATCAT+GGG | - | chr7_3:64277523-64277542 | Msa1116610:CDS | 45.0% | |
| CAGAGCCAGAGGATTTGTCA+AGG | + | chr7_3:64276228-64276247 | None:intergenic | 50.0% | |
| ! | CTTGACAAATCCTCTGGCTC+TGG | - | chr7_3:64276226-64276245 | Msa1116610:intron | 50.0% |
| GGATTGAAATCCAGAGCCAG+AGG | + | chr7_3:64276239-64276258 | None:intergenic | 50.0% | |
| CCTATGGTTTGACCCAACTG+CGG | - | chr7_3:64276603-64276622 | Msa1116610:CDS | 50.0% | |
| ! | TGCTTGGTTCTCAGAGGAGT+TGG | - | chr7_3:64277032-64277051 | Msa1116610:CDS | 50.0% |
| CAAGTCATGAGAGGCTCAAG+TGG | - | chr7_3:64277061-64277080 | Msa1116610:CDS | 50.0% | |
| CCATCCTGCATTCTTGAGGA+AGG | + | chr7_3:64277146-64277165 | None:intergenic | 50.0% | |
| CCTTCCTCAAGAATGCAGGA+TGG | - | chr7_3:64277143-64277162 | Msa1116610:intron | 50.0% | |
| GTGGAATCCATATGGGGAGA+TGG | - | chr7_3:64277511-64277530 | Msa1116610:CDS | 50.0% | |
| CAGAGCCAGAGGATTTGTCA+AGG | + | chr7_3:64276228-64276247 | None:intergenic | 50.0% | |
| ! | CTTGACAAATCCTCTGGCTC+TGG | - | chr7_3:64276226-64276245 | Msa1116610:intron | 50.0% |
| GGATTGAAATCCAGAGCCAG+AGG | + | chr7_3:64276239-64276258 | None:intergenic | 50.0% | |
| CCTATGGTTTGACCCAACTG+CGG | - | chr7_3:64276603-64276622 | Msa1116610:CDS | 50.0% | |
| ! | TGCTTGGTTCTCAGAGGAGT+TGG | - | chr7_3:64277032-64277051 | Msa1116610:CDS | 50.0% |
| CAAGTCATGAGAGGCTCAAG+TGG | - | chr7_3:64277061-64277080 | Msa1116610:CDS | 50.0% | |
| CCATCCTGCATTCTTGAGGA+AGG | + | chr7_3:64277146-64277165 | None:intergenic | 50.0% | |
| CCTTCCTCAAGAATGCAGGA+TGG | - | chr7_3:64277143-64277162 | Msa1116610:intron | 50.0% | |
| GTGGAATCCATATGGGGAGA+TGG | - | chr7_3:64277511-64277530 | Msa1116610:CDS | 50.0% | |
| ACGGTTGCAATTGCCTCTGC+TGG | - | chr7_3:64276121-64276140 | Msa1116610:CDS | 55.0% | |
| CCGCAGTTGGGTCAAACCAT+AGG | + | chr7_3:64276606-64276625 | None:intergenic | 55.0% | |
| CGGGTTCCAGAGGATGGAAT+AGG | + | chr7_3:64276638-64276657 | None:intergenic | 55.0% | |
| GCTGATGATTGGGCCACAAG+AGG | - | chr7_3:64276886-64276905 | Msa1116610:intron | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | - | chr7_3:64276889-64276908 | Msa1116610:intron | 55.0% | |
| CATTCTTGAGGAAGGCCCTG+AGG | + | chr7_3:64277138-64277157 | None:intergenic | 55.0% | |
| AGGGCCTTCCTCAAGAATGC+AGG | - | chr7_3:64277139-64277158 | Msa1116610:CDS | 55.0% | |
| ACGGTTGCAATTGCCTCTGC+TGG | - | chr7_3:64276121-64276140 | Msa1116610:CDS | 55.0% | |
| CCGCAGTTGGGTCAAACCAT+AGG | + | chr7_3:64276606-64276625 | None:intergenic | 55.0% | |
| CGGGTTCCAGAGGATGGAAT+AGG | + | chr7_3:64276638-64276657 | None:intergenic | 55.0% | |
| GCTGATGATTGGGCCACAAG+AGG | - | chr7_3:64276886-64276905 | Msa1116610:intron | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | - | chr7_3:64276889-64276908 | Msa1116610:intron | 55.0% | |
| CATTCTTGAGGAAGGCCCTG+AGG | + | chr7_3:64277138-64277157 | None:intergenic | 55.0% | |
| AGGGCCTTCCTCAAGAATGC+AGG | - | chr7_3:64277139-64277158 | Msa1116610:CDS | 55.0% | |
| CTCGTTCCTGGCAACTCTGC+TGG | - | chr7_3:64276301-64276320 | Msa1116610:intron | 60.0% | |
| ACAGTGCCAGCAGAGTTGCC+AGG | + | chr7_3:64276310-64276329 | None:intergenic | 60.0% | |
| CAATGCGTTGCGGGTTCCAG+AGG | + | chr7_3:64276648-64276667 | None:intergenic | 60.0% | |
| CTCGTTCCTGGCAACTCTGC+TGG | - | chr7_3:64276301-64276320 | Msa1116610:intron | 60.0% | |
| ACAGTGCCAGCAGAGTTGCC+AGG | + | chr7_3:64276310-64276329 | None:intergenic | 60.0% | |
| CAATGCGTTGCGGGTTCCAG+AGG | + | chr7_3:64276648-64276667 | None:intergenic | 60.0% | |
| GCGTTGCGGGTTCCAGAGGA+TGG | + | chr7_3:64276644-64276663 | None:intergenic | 65.0% | |
| GCGTTGCGGGTTCCAGAGGA+TGG | + | chr7_3:64276644-64276663 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 64276079 | 64277555 | 64276079 | ID=Msa1116610;Name=Msa1116610 |
| chr7_3 | mRNA | 64276079 | 64277555 | 64276079 | ID=Msa1116610-mRNA-1;Parent=Msa1116610;Name=Msa1116610-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.66|0.25|0.75|1|1|4|0|309 |
| chr7_3 | exon | 64277292 | 64277555 | 64277292 | ID=Msa1116610-mRNA-1:exon:15233;Parent=Msa1116610-mRNA-1 |
| chr7_3 | exon | 64276966 | 64277159 | 64276966 | ID=Msa1116610-mRNA-1:exon:15232;Parent=Msa1116610-mRNA-1 |
| chr7_3 | exon | 64276470 | 64276854 | 64276470 | ID=Msa1116610-mRNA-1:exon:15231;Parent=Msa1116610-mRNA-1 |
| chr7_3 | exon | 64276079 | 64276165 | 64276079 | ID=Msa1116610-mRNA-1:exon:15230;Parent=Msa1116610-mRNA-1 |
| chr7_3 | CDS | 64277292 | 64277555 | 64277292 | ID=Msa1116610-mRNA-1:cds;Parent=Msa1116610-mRNA-1 |
| chr7_3 | CDS | 64276966 | 64277159 | 64276966 | ID=Msa1116610-mRNA-1:cds;Parent=Msa1116610-mRNA-1 |
| chr7_3 | CDS | 64276470 | 64276854 | 64276470 | ID=Msa1116610-mRNA-1:cds;Parent=Msa1116610-mRNA-1 |
| chr7_3 | CDS | 64276079 | 64276165 | 64276079 | ID=Msa1116610-mRNA-1:cds;Parent=Msa1116610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
