Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162750 | XP_003625289.1 | 97.255 | 255 | 7 | 0 | 58 | 312 | 28 | 282 | 0.0 | 525 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162750 | sp|Q38910|XTH23_ARATH | 79.134 | 254 | 51 | 1 | 58 | 309 | 30 | 283 | 1.09e-153 | 434 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162750 | G7KW97 | 97.255 | 255 | 7 | 0 | 58 | 312 | 28 | 282 | 0.0 | 525 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014590 | Msa1162750 | 0.813659 | 2.288399e-51 | -8.615850e-47 |
| Msa0025570 | Msa1162750 | 0.801358 | 9.349382e-49 | -8.615850e-47 |
| Msa0040210 | Msa1162750 | 0.804710 | 1.895405e-49 | -8.615850e-47 |
| Msa0063540 | Msa1162750 | 0.805309 | 1.420590e-49 | -8.615850e-47 |
| Msa0073110 | Msa1162750 | 0.808153 | 3.562172e-50 | -8.615850e-47 |
| Msa0092220 | Msa1162750 | 0.812112 | 4.995105e-51 | -8.615850e-47 |
| Msa0108350 | Msa1162750 | 0.802180 | 6.339273e-49 | -8.615850e-47 |
| Msa0120450 | Msa1162750 | 0.817528 | 3.147014e-52 | -8.615850e-47 |
| Msa0608780 | Msa1162750 | -0.804598 | 2.000168e-49 | -8.615850e-47 |
| Msa0609460 | Msa1162750 | 0.816125 | 6.498536e-52 | -8.615850e-47 |
| Msa0616300 | Msa1162750 | 0.804994 | 1.653552e-49 | -8.615850e-47 |
| Msa0631700 | Msa1162750 | 0.800292 | 1.543231e-48 | -8.615850e-47 |
| Msa0649250 | Msa1162750 | -0.811520 | 6.719191e-51 | -8.615850e-47 |
| Msa0685080 | Msa1162750 | 0.821721 | 3.474058e-53 | -8.615850e-47 |
| Msa0708680 | Msa1162750 | 0.810728 | 9.976267e-51 | -8.615850e-47 |
| Msa0720870 | Msa1162750 | 0.800402 | 1.466064e-48 | -8.615850e-47 |
| Msa0761420 | Msa1162750 | 0.817035 | 4.063383e-52 | -8.615850e-47 |
| Msa0761950 | Msa1162750 | 0.804130 | 2.503488e-49 | -8.615850e-47 |
| Msa0789780 | Msa1162750 | 0.801530 | 8.620598e-49 | -8.615850e-47 |
| Msa0798840 | Msa1162750 | 0.801412 | 9.114251e-49 | -8.615850e-47 |
| Msa0803880 | Msa1162750 | 0.807486 | 4.938281e-50 | -8.615850e-47 |
| Msa0803940 | Msa1162750 | 0.805117 | 1.558591e-49 | -8.615850e-47 |
| Msa0806930 | Msa1162750 | 0.804357 | 2.245966e-49 | -8.615850e-47 |
| Msa0814160 | Msa1162750 | 0.802157 | 6.408972e-49 | -8.615850e-47 |
| Msa0822400 | Msa1162750 | 0.804825 | 1.793795e-49 | -8.615850e-47 |
| Msa0831890 | Msa1162750 | 0.811206 | 7.860256e-51 | -8.615850e-47 |
| Msa0841930 | Msa1162750 | 0.815356 | 9.641684e-52 | -8.615850e-47 |
| Msa0121320 | Msa1162750 | 0.806348 | 8.591672e-50 | -8.615850e-47 |
| Msa0134570 | Msa1162750 | 0.821284 | 4.381883e-53 | -8.615850e-47 |
| Msa0142560 | Msa1162750 | 0.801277 | 9.714976e-49 | -8.615850e-47 |
| Msa0150910 | Msa1162750 | 0.800218 | 1.597501e-48 | -8.615850e-47 |
| Msa0154460 | Msa1162750 | 0.816267 | 6.038582e-52 | -8.615850e-47 |
| Msa0163960 | Msa1162750 | -0.819347 | 1.218239e-52 | -8.615850e-47 |
| Msa0190670 | Msa1162750 | 0.810957 | 8.903692e-51 | -8.615850e-47 |
| Msa0192470 | Msa1162750 | 0.844796 | 6.055863e-59 | -8.615850e-47 |
| Msa0207640 | Msa1162750 | 0.803211 | 3.885116e-49 | -8.615850e-47 |
| Msa0207680 | Msa1162750 | 0.828442 | 8.971404e-55 | -8.615850e-47 |
| Msa0207690 | Msa1162750 | 0.800671 | 1.291961e-48 | -8.615850e-47 |
| Msa0209060 | Msa1162750 | 0.819827 | 9.467327e-53 | -8.615850e-47 |
| Msa0209360 | Msa1162750 | 0.824631 | 7.271074e-54 | -8.615850e-47 |
| Msa0220090 | Msa1162750 | 0.812182 | 4.822866e-51 | -8.615850e-47 |
| Msa0225070 | Msa1162750 | -0.801953 | 7.060595e-49 | -8.615850e-47 |
| Msa0238110 | Msa1162750 | 0.830645 | 2.613293e-55 | -8.615850e-47 |
| Msa0366510 | Msa1162750 | 0.803723 | 3.042495e-49 | -8.615850e-47 |
| Msa0374040 | Msa1162750 | 0.840402 | 8.886512e-58 | -8.615850e-47 |
| Msa0390160 | Msa1162750 | 0.808470 | 3.048188e-50 | -8.615850e-47 |
| Msa0390170 | Msa1162750 | 0.802521 | 5.392979e-49 | -8.615850e-47 |
| Msa0403740 | Msa1162750 | -0.802184 | 6.327896e-49 | -8.615850e-47 |
| Msa0409500 | Msa1162750 | 0.812983 | 3.221503e-51 | -8.615850e-47 |
| Msa0409530 | Msa1162750 | 0.803423 | 3.511074e-49 | -8.615850e-47 |
| Msa0414480 | Msa1162750 | 0.808350 | 3.234302e-50 | -8.615850e-47 |
| Msa0417400 | Msa1162750 | 0.811522 | 6.712001e-51 | -8.615850e-47 |
| Msa0423220 | Msa1162750 | 0.805191 | 1.504085e-49 | -8.615850e-47 |
| Msa0427560 | Msa1162750 | 0.802394 | 5.729699e-49 | -8.615850e-47 |
| Msa0454160 | Msa1162750 | 0.801373 | 9.285697e-49 | -8.615850e-47 |
| Msa0456450 | Msa1162750 | -0.805498 | 1.296674e-49 | -8.615850e-47 |
| Msa0457070 | Msa1162750 | -0.810074 | 1.381152e-50 | -8.615850e-47 |
| Msa0987640 | Msa1162750 | 0.801695 | 7.973380e-49 | -8.615850e-47 |
| Msa0996980 | Msa1162750 | 0.817224 | 3.684949e-52 | -8.615850e-47 |
| Msa1006170 | Msa1162750 | 0.830064 | 3.624652e-55 | -8.615850e-47 |
| Msa1018590 | Msa1162750 | 0.800664 | 1.296417e-48 | -8.615850e-47 |
| Msa1022510 | Msa1162750 | 0.826147 | 3.181926e-54 | -8.615850e-47 |
| Msa1024420 | Msa1162750 | 0.812779 | 3.570514e-51 | -8.615850e-47 |
| Msa1030320 | Msa1162750 | 0.819793 | 9.634847e-53 | -8.615850e-47 |
| Msa1035450 | Msa1162750 | 0.883040 | 6.281042e-71 | -8.615850e-47 |
| Msa1041250 | Msa1162750 | 0.823805 | 1.136334e-53 | -8.615850e-47 |
| Msa1063260 | Msa1162750 | 0.815005 | 1.153598e-51 | -8.615850e-47 |
| Msa1064940 | Msa1162750 | 0.807178 | 5.739600e-50 | -8.615850e-47 |
| Msa1069350 | Msa1162750 | 0.801142 | 1.035024e-48 | -8.615850e-47 |
| Msa1075320 | Msa1162750 | 0.927285 | 1.453232e-91 | -8.615850e-47 |
| Msa1087380 | Msa1162750 | 0.809424 | 1.905460e-50 | -8.615850e-47 |
| Msa1106680 | Msa1162750 | 0.832261 | 1.045863e-55 | -8.615850e-47 |
| Msa0242830 | Msa1162750 | 0.809442 | 1.888509e-50 | -8.615850e-47 |
| Msa0248320 | Msa1162750 | 0.804923 | 1.710973e-49 | -8.615850e-47 |
| Msa0261400 | Msa1162750 | 0.812243 | 4.676502e-51 | -8.615850e-47 |
| Msa0267400 | Msa1162750 | 0.934551 | 3.391978e-96 | -8.615850e-47 |
| Msa0269240 | Msa1162750 | 0.801763 | 7.724282e-49 | -8.615850e-47 |
| Msa0272840 | Msa1162750 | 0.843614 | 1.257435e-58 | -8.615850e-47 |
| Msa0278460 | Msa1162750 | 0.813609 | 2.347347e-51 | -8.615850e-47 |
| Msa0281190 | Msa1162750 | 0.801039 | 1.086622e-48 | -8.615850e-47 |
| Msa0288540 | Msa1162750 | 0.816081 | 6.644366e-52 | -8.615850e-47 |
| Msa0299030 | Msa1162750 | 0.809256 | 2.070458e-50 | -8.615850e-47 |
| Msa0303900 | Msa1162750 | 0.801802 | 7.582761e-49 | -8.615850e-47 |
| Msa0328090 | Msa1162750 | 0.819175 | 1.333490e-52 | -8.615850e-47 |
| Msa0333770 | Msa1162750 | 0.809308 | 2.017604e-50 | -8.615850e-47 |
| Msa0348370 | Msa1162750 | 0.804760 | 1.850531e-49 | -8.615850e-47 |
| Msa0349910 | Msa1162750 | 0.803444 | 3.476326e-49 | -8.615850e-47 |
| Msa0364030 | Msa1162750 | -0.801835 | 7.465464e-49 | -8.615850e-47 |
| Msa1108560 | Msa1162750 | 0.832916 | 7.193405e-56 | -8.615850e-47 |
| Msa1116610 | Msa1162750 | 0.842213 | 2.966372e-58 | -8.615850e-47 |
| Msa1143250 | Msa1162750 | 0.802795 | 4.735950e-49 | -8.615850e-47 |
| Msa1147030 | Msa1162750 | 0.802095 | 6.600529e-49 | -8.615850e-47 |
| Msa1148210 | Msa1162750 | 0.805646 | 1.207522e-49 | -8.615850e-47 |
| Msa1152330 | Msa1162750 | 0.804347 | 2.256371e-49 | -8.615850e-47 |
| Msa1156240 | Msa1162750 | 0.813184 | 2.909803e-51 | -8.615850e-47 |
| Msa1157210 | Msa1162750 | 0.809398 | 1.929530e-50 | -8.615850e-47 |
| Msa1162750 | Msa1165670 | 0.803412 | 3.530149e-49 | -8.615850e-47 |
| Msa1162750 | Msa1170340 | 0.843163 | 1.659501e-58 | -8.615850e-47 |
| Msa1162750 | Msa1181090 | 0.844338 | 8.041603e-59 | -8.615850e-47 |
| Msa1162750 | Msa1186340 | 0.812681 | 3.751823e-51 | -8.615850e-47 |
| Msa1162750 | Msa1188080 | 0.806816 | 6.846056e-50 | -8.615850e-47 |
| Msa1162750 | Msa1191640 | 0.845609 | 3.650912e-59 | -8.615850e-47 |
| Msa1162750 | Msa1200270 | 0.816212 | 6.211943e-52 | -8.615850e-47 |
| Msa1162750 | Msa1200290 | 0.802486 | 5.483765e-49 | -8.615850e-47 |
| Msa1162750 | Msa1205270 | -0.803373 | 3.595076e-49 | -8.615850e-47 |
| Msa1162750 | Msa1221290 | 0.857941 | 1.158240e-62 | -8.615850e-47 |
| Msa1162750 | Msa1236860 | -0.809782 | 1.595832e-50 | -8.615850e-47 |
| Msa1162750 | Msa1238250 | 0.800447 | 1.435206e-48 | -8.615850e-47 |
| Msa1162750 | Msa1245530 | 0.818829 | 1.597965e-52 | -8.615850e-47 |
| Msa1162750 | Msa1263110 | 0.808138 | 3.589035e-50 | -8.615850e-47 |
| Msa1162750 | Msa1267990 | 0.824853 | 6.444750e-54 | -8.615850e-47 |
| Msa1162750 | Msa1269500 | 0.800212 | 1.602273e-48 | -8.615850e-47 |
| Msa1162750 | Msa1283600 | 0.809739 | 1.630162e-50 | -8.615850e-47 |
| Msa1162750 | Msa1284020 | 0.805229 | 1.476470e-49 | -8.615850e-47 |
| Msa1162750 | Msa1306520 | 0.801892 | 7.266183e-49 | -8.615850e-47 |
| Msa1162750 | Msa1317240 | -0.805017 | 1.635456e-49 | -8.615850e-47 |
| Msa1162750 | Msa1319030 | 0.802920 | 4.462437e-49 | -8.615850e-47 |
| Msa1162750 | Msa1319190 | 0.807164 | 5.777384e-50 | -8.615850e-47 |
| Msa1162750 | Msa1321970 | 0.823595 | 1.272981e-53 | -8.615850e-47 |
| Msa1162750 | Msa1322500 | 0.836759 | 7.749895e-57 | -8.615850e-47 |
| Msa1162750 | Msa1323260 | -0.820406 | 6.974954e-53 | -8.615850e-47 |
| Msa1162750 | Msa1337450 | 0.851803 | 6.997186e-61 | -8.615850e-47 |
| Msa1162750 | Msa1342360 | -0.805119 | 1.557063e-49 | -8.615850e-47 |
| Msa1162750 | Msa1343450 | -0.801920 | 7.171231e-49 | -8.615850e-47 |
| Msa1162750 | Msa1366480 | 0.809240 | 2.087035e-50 | -8.615850e-47 |
| Msa1162750 | Msa1380740 | 0.819088 | 1.395272e-52 | -8.615850e-47 |
| Msa1162750 | Msa1387480 | 0.801075 | 1.068310e-48 | -8.615850e-47 |
| Msa1162750 | Msa1406840 | 0.806048 | 9.937493e-50 | -8.615850e-47 |
| Msa1162750 | Msa1441450 | 0.806843 | 6.755072e-50 | -8.615850e-47 |
| Msa1162750 | Msa1456620 | -0.821576 | 3.752831e-53 | -8.615850e-47 |
| Msa1162750 | Msa1459610 | 0.813724 | 2.214371e-51 | -8.615850e-47 |
| Msa1162750 | Msa1461660 | 0.804517 | 2.080155e-49 | -8.615850e-47 |
| Msa0496070 | Msa1162750 | 0.810881 | 9.246442e-51 | -8.615850e-47 |
| Msa0501080 | Msa1162750 | 0.803284 | 3.752251e-49 | -8.615850e-47 |
| Msa0502970 | Msa1162750 | 0.815493 | 8.986489e-52 | -8.615850e-47 |
| Msa0515130 | Msa1162750 | 0.810594 | 1.066403e-50 | -8.615850e-47 |
| Msa0515150 | Msa1162750 | 0.821660 | 3.588448e-53 | -8.615850e-47 |
| Msa0524370 | Msa1162750 | 0.807649 | 4.560093e-50 | -8.615850e-47 |
| Msa0530990 | Msa1162750 | 0.816674 | 4.894969e-52 | -8.615850e-47 |
| Msa0554660 | Msa1162750 | 0.805356 | 1.388604e-49 | -8.615850e-47 |
| Msa0559660 | Msa1162750 | 0.818035 | 2.418288e-52 | -8.615850e-47 |
| Msa0565150 | Msa1162750 | -0.803391 | 3.564855e-49 | -8.615850e-47 |
| Msa0575380 | Msa1162750 | 0.813588 | 2.372278e-51 | -8.615850e-47 |
| Msa0576180 | Msa1162750 | 0.807572 | 4.735373e-50 | -8.615850e-47 |
| Msa0581370 | Msa1162750 | 0.856696 | 2.702487e-62 | -8.615850e-47 |
| Msa0587870 | Msa1162750 | 0.835436 | 1.680303e-56 | -8.615850e-47 |
| Msa0591490 | Msa1162750 | 0.828652 | 7.982939e-55 | -8.615850e-47 |
| Msa0873880 | Msa1162750 | 0.803673 | 3.115257e-49 | -8.615850e-47 |
| Msa0880910 | Msa1162750 | 0.811414 | 7.084896e-51 | -8.615850e-47 |
| Msa0896920 | Msa1162750 | 0.836106 | 1.136744e-56 | -8.615850e-47 |
| Msa0896950 | Msa1162750 | 0.823792 | 1.144401e-53 | -8.615850e-47 |
| Msa0898830 | Msa1162750 | -0.815306 | 9.891573e-52 | -8.615850e-47 |
| Msa0930210 | Msa1162750 | 0.824842 | 6.483969e-54 | -8.615850e-47 |
| Msa0932140 | Msa1162750 | 0.801740 | 7.807183e-49 | -8.615850e-47 |
| Msa0946010 | Msa1162750 | 0.825098 | 5.641711e-54 | -8.615850e-47 |
| Msa0951150 | Msa1162750 | 0.800319 | 1.523832e-48 | -8.615850e-47 |
| Msa0967780 | Msa1162750 | 0.804911 | 1.720884e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162750 | MtrunA17_Chr7g0258911 | 97.255 | 255 | 7 | 0 | 58 | 312 | 28 | 282 | 0.0 | 525 |
| Msa1162750 | MtrunA17_Chr4g0072611 | 92.549 | 255 | 19 | 0 | 58 | 312 | 29 | 283 | 0.0 | 501 |
| Msa1162750 | MtrunA17_Chr4g0072671 | 86.220 | 254 | 31 | 2 | 60 | 309 | 32 | 285 | 4.19e-161 | 450 |
| Msa1162750 | MtrunA17_Chr4g0072601 | 77.778 | 252 | 56 | 0 | 58 | 309 | 32 | 283 | 1.03e-150 | 424 |
| Msa1162750 | MtrunA17_Chr4g0071341 | 77.432 | 257 | 57 | 1 | 57 | 312 | 28 | 284 | 2.45e-147 | 415 |
| Msa1162750 | MtrunA17_Chr2g0299061 | 69.123 | 285 | 70 | 3 | 43 | 309 | 2 | 286 | 7.24e-141 | 399 |
| Msa1162750 | MtrunA17_Chr3g0122021 | 75.197 | 254 | 55 | 2 | 58 | 310 | 32 | 278 | 8.86e-137 | 389 |
| Msa1162750 | MtrunA17_Chr3g0122031 | 75.197 | 254 | 55 | 2 | 58 | 310 | 32 | 278 | 1.06e-136 | 388 |
| Msa1162750 | MtrunA17_Chr8g0377841 | 73.810 | 252 | 61 | 1 | 58 | 309 | 35 | 281 | 4.51e-135 | 384 |
| Msa1162750 | MtrunA17_Chr4g0072681 | 81.279 | 219 | 36 | 1 | 96 | 309 | 25 | 243 | 2.64e-131 | 373 |
| Msa1162750 | MtrunA17_Chr8g0389641 | 65.476 | 252 | 45 | 1 | 59 | 310 | 34 | 243 | 1.41e-117 | 338 |
| Msa1162750 | MtrunA17_Chr7g0252631 | 57.708 | 253 | 101 | 3 | 61 | 310 | 39 | 288 | 3.07e-102 | 301 |
| Msa1162750 | MtrunA17_Chr7g0252601 | 56.917 | 253 | 103 | 3 | 61 | 310 | 39 | 288 | 4.26e-102 | 301 |
| Msa1162750 | MtrunA17_Chr6g0461731 | 57.937 | 252 | 100 | 3 | 61 | 309 | 62 | 310 | 5.35e-102 | 301 |
| Msa1162750 | MtrunA17_Chr7g0252621 | 57.708 | 253 | 101 | 3 | 61 | 310 | 39 | 288 | 5.60e-102 | 300 |
| Msa1162750 | MtrunA17_Chr5g0443391 | 55.731 | 253 | 107 | 2 | 58 | 310 | 32 | 279 | 2.43e-101 | 299 |
| Msa1162750 | MtrunA17_Chr6g0461761 | 58.333 | 252 | 99 | 3 | 61 | 309 | 39 | 287 | 3.10e-101 | 298 |
| Msa1162750 | MtrunA17_Chr3g0096651 | 55.600 | 250 | 106 | 2 | 62 | 310 | 38 | 283 | 1.31e-100 | 297 |
| Msa1162750 | MtrunA17_Chr6g0486581 | 54.724 | 254 | 109 | 2 | 60 | 309 | 32 | 283 | 5.87e-100 | 295 |
| Msa1162750 | MtrunA17_Chr2g0323161 | 53.488 | 258 | 106 | 5 | 62 | 309 | 33 | 286 | 1.85e-97 | 289 |
| Msa1162750 | MtrunA17_Chr4g0023961 | 53.282 | 259 | 107 | 5 | 61 | 309 | 34 | 288 | 1.60e-95 | 284 |
| Msa1162750 | MtrunA17_Chr4g0054431 | 50.391 | 256 | 119 | 5 | 58 | 309 | 36 | 287 | 2.59e-92 | 276 |
| Msa1162750 | MtrunA17_Chr4g0054451 | 50.391 | 256 | 119 | 5 | 58 | 309 | 38 | 289 | 2.71e-92 | 276 |
| Msa1162750 | MtrunA17_Chr1g0206681 | 49.606 | 254 | 126 | 1 | 60 | 311 | 40 | 293 | 8.74e-90 | 270 |
| Msa1162750 | MtrunA17_Chr1g0206081 | 50.000 | 260 | 122 | 4 | 58 | 311 | 39 | 296 | 9.82e-86 | 259 |
| Msa1162750 | MtrunA17_Chr8g0390201 | 56.122 | 196 | 80 | 3 | 119 | 309 | 15 | 209 | 4.57e-75 | 229 |
| Msa1162750 | MtrunA17_Chr8g0340001 | 45.992 | 237 | 117 | 5 | 78 | 309 | 1 | 231 | 1.90e-68 | 213 |
| Msa1162750 | MtrunA17_Chr4g0072641 | 75.397 | 126 | 17 | 1 | 184 | 309 | 37 | 148 | 7.50e-65 | 201 |
| Msa1162750 | MtrunA17_Chr4g0028221 | 41.797 | 256 | 132 | 7 | 62 | 309 | 58 | 304 | 7.90e-62 | 198 |
| Msa1162750 | MtrunA17_Chr7g0264731 | 40.625 | 256 | 135 | 7 | 62 | 309 | 45 | 291 | 7.74e-60 | 193 |
| Msa1162750 | MtrunA17_Chr1g0180451 | 40.625 | 256 | 135 | 6 | 62 | 309 | 48 | 294 | 9.00e-60 | 193 |
| Msa1162750 | MtrunA17_Chr2g0327411 | 41.406 | 256 | 134 | 8 | 62 | 309 | 62 | 309 | 9.62e-59 | 191 |
| Msa1162750 | MtrunA17_Chr2g0303861 | 42.520 | 254 | 129 | 9 | 62 | 310 | 37 | 278 | 1.50e-58 | 189 |
| Msa1162750 | MtrunA17_Chr8g0375981 | 37.918 | 269 | 153 | 7 | 51 | 309 | 26 | 290 | 3.77e-57 | 187 |
| Msa1162750 | MtrunA17_Chr2g0303721 | 42.063 | 252 | 124 | 9 | 62 | 306 | 38 | 274 | 2.04e-55 | 181 |
| Msa1162750 | MtrunA17_Chr1g0161951 | 40.698 | 258 | 136 | 8 | 62 | 309 | 41 | 291 | 4.89e-55 | 182 |
| Msa1162750 | MtrunA17_Chr7g0235541 | 45.161 | 217 | 105 | 6 | 101 | 311 | 1 | 209 | 3.06e-54 | 176 |
| Msa1162750 | MtrunA17_Chr8g0365231 | 36.782 | 261 | 152 | 7 | 61 | 310 | 53 | 311 | 4.03e-51 | 171 |
| Msa1162750 | MtrunA17_Chr5g0410621 | 34.733 | 262 | 157 | 6 | 62 | 312 | 50 | 308 | 3.87e-49 | 167 |
| Msa1162750 | MtrunA17_Chr8g0382041 | 35.688 | 269 | 142 | 10 | 62 | 312 | 42 | 297 | 4.94e-44 | 153 |
| Msa1162750 | MtrunA17_Chr8g0374231 | 45.714 | 105 | 52 | 3 | 210 | 311 | 1 | 103 | 4.94e-24 | 94.4 |
| Msa1162750 | MtrunA17_Chr4g0072631 | 88.372 | 43 | 5 | 0 | 59 | 101 | 36 | 78 | 1.91e-19 | 82.0 |
| Msa1162750 | MtrunA17_Chr4g0017101 | 82.000 | 50 | 9 | 0 | 1 | 50 | 232 | 281 | 2.20e-19 | 86.7 |
| Msa1162750 | MtrunA17_Chr4g0015901 | 82.000 | 50 | 9 | 0 | 1 | 50 | 271 | 320 | 3.73e-19 | 86.3 |
| Msa1162750 | MtrunA17_CPg0492641 | 82.000 | 50 | 9 | 0 | 1 | 50 | 271 | 320 | 3.73e-19 | 86.3 |
| Msa1162750 | MtrunA17_Chr8g0390181 | 58.065 | 62 | 24 | 1 | 60 | 121 | 34 | 93 | 1.85e-16 | 73.6 |
| Msa1162750 | MtrunA17_Chr8g0350711 | 32.759 | 174 | 109 | 4 | 76 | 247 | 54 | 221 | 2.29e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162750 | AT4G25810.1 | 79.134 | 254 | 51 | 1 | 58 | 309 | 30 | 283 | 1.10e-154 | 434 |
| Msa1162750 | AT5G57560.1 | 75.294 | 255 | 60 | 1 | 58 | 309 | 27 | 281 | 1.65e-148 | 419 |
| Msa1162750 | AT5G57550.1 | 73.518 | 253 | 64 | 1 | 58 | 310 | 34 | 283 | 4.68e-146 | 412 |
| Msa1162750 | AT4G30270.1 | 73.810 | 252 | 52 | 2 | 58 | 309 | 28 | 265 | 4.83e-142 | 402 |
| Msa1162750 | AT3G23730.1 | 69.650 | 257 | 74 | 1 | 58 | 310 | 31 | 287 | 2.78e-136 | 388 |
| Msa1162750 | AT5G57530.1 | 69.291 | 254 | 78 | 0 | 58 | 311 | 31 | 284 | 5.76e-134 | 382 |
| Msa1162750 | AT4G14130.1 | 69.291 | 254 | 77 | 1 | 58 | 310 | 32 | 285 | 1.84e-132 | 378 |
| Msa1162750 | AT5G57540.1 | 68.110 | 254 | 81 | 0 | 58 | 311 | 30 | 283 | 2.27e-132 | 378 |
| Msa1162750 | AT5G48070.1 | 66.798 | 253 | 79 | 2 | 58 | 309 | 33 | 281 | 1.16e-131 | 376 |
| Msa1162750 | AT2G18800.1 | 67.547 | 265 | 73 | 4 | 58 | 309 | 32 | 296 | 2.06e-129 | 371 |
| Msa1162750 | AT4G25820.1 | 68.110 | 254 | 81 | 0 | 58 | 311 | 34 | 287 | 2.76e-129 | 370 |
| Msa1162750 | AT1G65310.2 | 65.217 | 253 | 83 | 2 | 58 | 309 | 55 | 303 | 2.02e-119 | 345 |
| Msa1162750 | AT1G65310.1 | 65.217 | 253 | 83 | 2 | 58 | 309 | 33 | 281 | 2.71e-119 | 344 |
| Msa1162750 | AT4G30280.1 | 64.822 | 253 | 84 | 2 | 58 | 309 | 33 | 281 | 1.14e-118 | 343 |
| Msa1162750 | AT4G30290.1 | 64.822 | 253 | 84 | 2 | 58 | 309 | 28 | 276 | 1.94e-118 | 342 |
| Msa1162750 | AT5G13870.2 | 58.893 | 253 | 98 | 3 | 61 | 310 | 39 | 288 | 1.41e-102 | 302 |
| Msa1162750 | AT5G13870.1 | 58.893 | 253 | 98 | 3 | 61 | 310 | 39 | 288 | 1.41e-102 | 302 |
| Msa1162750 | AT5G13870.3 | 58.893 | 253 | 98 | 3 | 61 | 310 | 39 | 288 | 1.41e-102 | 302 |
| Msa1162750 | AT2G06850.1 | 56.299 | 254 | 103 | 3 | 61 | 310 | 42 | 291 | 3.13e-98 | 291 |
| Msa1162750 | AT4G03210.1 | 53.150 | 254 | 111 | 4 | 61 | 310 | 36 | 285 | 3.06e-96 | 286 |
| Msa1162750 | AT5G65730.1 | 49.801 | 251 | 124 | 2 | 61 | 310 | 42 | 291 | 1.67e-92 | 277 |
| Msa1162750 | AT4G28850.1 | 52.549 | 255 | 114 | 3 | 60 | 309 | 35 | 287 | 1.97e-92 | 276 |
| Msa1162750 | AT2G06850.2 | 57.826 | 230 | 91 | 3 | 84 | 310 | 5 | 231 | 5.40e-92 | 273 |
| Msa1162750 | AT4G03210.2 | 53.975 | 239 | 101 | 4 | 76 | 310 | 24 | 257 | 3.70e-91 | 272 |
| Msa1162750 | AT4G37800.1 | 50.781 | 256 | 118 | 5 | 58 | 309 | 38 | 289 | 2.09e-90 | 271 |
| Msa1162750 | AT2G14620.1 | 49.020 | 255 | 126 | 2 | 60 | 311 | 43 | 296 | 2.69e-86 | 261 |
| Msa1162750 | AT1G11545.1 | 50.000 | 266 | 115 | 6 | 58 | 311 | 42 | 301 | 2.82e-86 | 261 |
| Msa1162750 | AT4G13090.1 | 49.213 | 254 | 124 | 3 | 60 | 310 | 38 | 289 | 2.33e-82 | 251 |
| Msa1162750 | AT2G14620.2 | 50.435 | 230 | 110 | 2 | 85 | 311 | 18 | 246 | 1.78e-80 | 244 |
| Msa1162750 | AT2G14620.3 | 51.131 | 221 | 104 | 2 | 94 | 311 | 16 | 235 | 1.57e-78 | 239 |
| Msa1162750 | AT3G25050.1 | 46.640 | 253 | 128 | 4 | 60 | 309 | 41 | 289 | 4.60e-78 | 240 |
| Msa1162750 | AT4G13080.1 | 46.614 | 251 | 131 | 3 | 60 | 310 | 45 | 292 | 2.56e-76 | 236 |
| Msa1162750 | AT2G36870.1 | 41.797 | 256 | 132 | 6 | 62 | 309 | 51 | 297 | 1.32e-60 | 195 |
| Msa1162750 | AT3G44990.1 | 43.320 | 247 | 124 | 6 | 62 | 300 | 47 | 285 | 5.98e-59 | 191 |
| Msa1162750 | AT1G32170.1 | 38.618 | 246 | 139 | 7 | 76 | 312 | 54 | 296 | 5.84e-54 | 179 |
| Msa1162750 | AT1G10550.1 | 35.938 | 256 | 147 | 5 | 69 | 309 | 56 | 309 | 2.01e-52 | 175 |
| Msa1162750 | AT1G14720.1 | 36.667 | 270 | 157 | 8 | 50 | 309 | 25 | 290 | 3.26e-52 | 175 |
| Msa1162750 | AT2G01850.1 | 34.766 | 256 | 155 | 7 | 62 | 309 | 39 | 290 | 1.53e-47 | 162 |
| Msa1162750 | AT4G18990.1 | 36.398 | 261 | 135 | 9 | 76 | 312 | 62 | 315 | 2.68e-45 | 157 |
| Msa1162750 | AT3G48580.1 | 36.800 | 250 | 140 | 8 | 61 | 309 | 41 | 273 | 3.71e-45 | 155 |
| Msa1162750 | AT3G48580.3 | 35.683 | 227 | 129 | 7 | 84 | 309 | 4 | 214 | 1.46e-39 | 139 |
| Msa1162750 | AT4G18990.2 | 36.408 | 206 | 105 | 7 | 127 | 312 | 42 | 241 | 9.68e-38 | 135 |
| Msa1162750 | AT2G36870.2 | 45.385 | 130 | 61 | 3 | 62 | 183 | 51 | 178 | 2.24e-29 | 110 |
| Msa1162750 | AT3G48580.2 | 31.600 | 250 | 133 | 9 | 61 | 309 | 41 | 253 | 2.34e-28 | 110 |
| Msa1162750 | ATCG00740.1 | 77.778 | 45 | 10 | 0 | 6 | 50 | 276 | 320 | 4.93e-15 | 75.1 |
Find 68 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGATGTGCTTACATAAT+AGG | 0.234785 | 7_4:-53547867 | None:intergenic |
| GTCTAATATACATACATTAT+TGG | 0.249537 | 7_4:+53546585 | Msa1162750:CDS |
| GAAATTGACTTTGAATTCTT+AGG | 0.253040 | 7_4:+53548034 | Msa1162750:CDS |
| TGAGAATCTATTCTAGTCTT+TGG | 0.265403 | 7_4:+53548375 | Msa1162750:CDS |
| ATGTTCTTGAATTCTCTAAT+TGG | 0.274937 | 7_4:-53548314 | None:intergenic |
| AATGCATGCACTGTGTCTTC+TGG | 0.314712 | 7_4:+53548488 | Msa1162750:CDS |
| GTCTTTGGAATGCTGATGAT+TGG | 0.342081 | 7_4:+53548390 | Msa1162750:CDS |
| GAAATAATTTACCATAGAAA+TGG | 0.363559 | 7_4:-53548784 | None:intergenic |
| TTCACACCTATTCCATCCTC+TGG | 0.371800 | 7_4:+53548161 | Msa1162750:CDS |
| TCCTGGGAGACAATTCTAAT+TGG | 0.386134 | 7_4:-53546543 | None:intergenic |
| ATTAGCATTGAAGTTTCTAT+AGG | 0.401233 | 7_4:-53548468 | None:intergenic |
| CTATAAAGAATCCATTTCTA+TGG | 0.407346 | 7_4:+53548773 | Msa1162750:three_prime_UTR |
| ACATTGGTATGAAGAATGTA+TGG | 0.415981 | 7_4:-53548073 | None:intergenic |
| TGCTTGGTTCTCAGAGGAGT+TGG | 0.433098 | 7_4:+53548547 | Msa1162750:CDS |
| AAGGCCCTGAGGAAATCTTT+TGG | 0.436526 | 7_4:-53548639 | None:intergenic |
| AGACTAGAATAGATTCTCAT+TGG | 0.441045 | 7_4:-53548371 | None:intergenic |
| CTTGACAAATCCTCTGGCTC+TGG | 0.442693 | 7_4:+53547758 | Msa1162750:CDS |
| ATGCAGCTTAAACTCGTTCC+TGG | 0.444564 | 7_4:+53547821 | Msa1162750:CDS |
| CTCGTTCCTGGCAACTCTGC+TGG | 0.457205 | 7_4:+53547833 | Msa1162750:CDS |
| TTGTCTCTTGACAAATCCTC+TGG | 0.457727 | 7_4:+53547752 | Msa1162750:CDS |
| TAGAATAGATTCTCATTGGT+TGG | 0.468992 | 7_4:-53548367 | None:intergenic |
| TCTTTGGAATGCTGATGATT+GGG | 0.473720 | 7_4:+53548391 | Msa1162750:CDS |
| TTTAAGACAAGTATAGATCC+TGG | 0.474514 | 7_4:-53546560 | None:intergenic |
| CACAGTCTAATAAGAATGCT+TGG | 0.481977 | 7_4:+53548531 | Msa1162750:CDS |
| ACAGTTGCAATTGCCTCTGC+TGG | 0.489680 | 7_4:+53547661 | Msa1162750:intron |
| TGATACCAAAAGATTTCCTC+AGG | 0.490646 | 7_4:+53548634 | Msa1162750:CDS |
| TTCAAGAACATGGAATCAAA+TGG | 0.495147 | 7_4:+53548326 | Msa1162750:CDS |
| TGGGTTCCAGAGGATGGAAT+AGG | 0.498523 | 7_4:-53548167 | None:intergenic |
| GAGAGCAACAATTCTACCTA+TGG | 0.502278 | 7_4:+53548119 | Msa1162750:CDS |
| CTTAACAAGTCCACCTCTTG+TGG | 0.502433 | 7_4:-53548414 | None:intergenic |
| GTACTTACACAATGCGTTGT+GGG | 0.502506 | 7_4:-53548186 | None:intergenic |
| TTAATTCAGCTATCATCAAA+AGG | 0.502910 | 7_4:+53547998 | Msa1162750:intron |
| GTGGACTTGTTAAGACAGAT+TGG | 0.508499 | 7_4:+53548423 | Msa1162750:CDS |
| ACCAATTAGAATTGTCTCCC+AGG | 0.525817 | 7_4:+53546542 | Msa1162750:CDS |
| GGAAGCAGTGAAAGGAGCAT+TGG | 0.527846 | 7_4:-53548447 | None:intergenic |
| TTAAGACAAGTATAGATCCT+GGG | 0.530556 | 7_4:-53546559 | None:intergenic |
| ACAGTGCCAGCAGAGTTGCC+AGG | 0.543526 | 7_4:-53547839 | None:intergenic |
| GCGTTGTGGGTTCCAGAGGA+TGG | 0.545929 | 7_4:-53548173 | None:intergenic |
| CTGCAGTTGGGTCAAACCAT+AGG | 0.546848 | 7_4:-53548135 | None:intergenic |
| CAAGAGACAAAGTAAGAAGT+TGG | 0.551315 | 7_4:-53547739 | None:intergenic |
| AATGTGTTTAGCCAAGGAAA+AGG | 0.552403 | 7_4:+53548091 | Msa1162750:CDS |
| TAGGTGTGAAAATCTGCAGT+TGG | 0.552711 | 7_4:-53548148 | None:intergenic |
| AGGGCCTTCCTCAAGAATGC+AGG | 0.553967 | 7_4:+53548654 | Msa1162750:CDS |
| AAATACAATACGAAGGGTTG+AGG | 0.556496 | 7_4:-53548708 | None:intergenic |
| CATACCAATGTGTTTAGCCA+AGG | 0.557351 | 7_4:+53548085 | Msa1162750:CDS |
| AGGTGTGAAAATCTGCAGTT+GGG | 0.562198 | 7_4:-53548147 | None:intergenic |
| TTTCTATAGGAAGCAGTGAA+AGG | 0.568107 | 7_4:-53548455 | None:intergenic |
| ATCATCAAAAGGAGGTGCAT+GGG | 0.570048 | 7_4:+53548009 | Msa1162750:CDS |
| CAAGTCATGAGAGGCTCAAG+TGG | 0.575997 | 7_4:+53548576 | Msa1162750:CDS |
| TAAACCATCCTGCATTCTTG+AGG | 0.578265 | 7_4:-53548662 | None:intergenic |
| TATCATCAAAAGGAGGTGCA+TGG | 0.582020 | 7_4:+53548008 | Msa1162750:CDS |
| CAATGCGTTGTGGGTTCCAG+AGG | 0.582602 | 7_4:-53548177 | None:intergenic |
| AGTACTTACACAATGCGTTG+TGG | 0.583264 | 7_4:-53548187 | None:intergenic |
| AATTAGAGAATTCAAGAACA+TGG | 0.587989 | 7_4:+53548316 | Msa1162750:CDS |
| GATGATTGGGCCACAAGAGG+TGG | 0.592351 | 7_4:+53548404 | Msa1162750:CDS |
| CCATCCTGCATTCTTGAGGA+AGG | 0.601607 | 7_4:-53548658 | None:intergenic |
| CATTGGTATGAAGAATGTAT+GGG | 0.604051 | 7_4:-53548072 | None:intergenic |
| GGATTGAAAGCCAGAGCCAG+AGG | 0.618299 | 7_4:-53547768 | None:intergenic |
| GAATTCTTAGGAAACTTGAG+TGG | 0.632192 | 7_4:+53548046 | Msa1162750:CDS |
| GCTGATGATTGGGCCACAAG+AGG | 0.655452 | 7_4:+53548401 | Msa1162750:CDS |
| CATTCTTGAGGAAGGCCCTG+AGG | 0.663273 | 7_4:-53548650 | None:intergenic |
| TAAGAATGCTTGGTTCTCAG+AGG | 0.671213 | 7_4:+53548541 | Msa1162750:CDS |
| CGTGCTAAAATACTCAACAA+TGG | 0.672548 | 7_4:+53547716 | Msa1162750:CDS |
| AAGTCATGAGAGGCTCAAGT+GGG | 0.675575 | 7_4:+53548577 | Msa1162750:CDS |
| TGGATTCTACAAGTCATGAG+AGG | 0.679866 | 7_4:+53548567 | Msa1162750:CDS |
| CCTTCCTCAAGAATGCAGGA+TGG | 0.683725 | 7_4:+53548658 | Msa1162750:CDS |
| ATTCAGCTATCATCAAAAGG+AGG | 0.688497 | 7_4:+53548001 | Msa1162750:intron |
| GATACCAAAAGATTTCCTCA+GGG | 0.691000 | 7_4:+53548635 | Msa1162750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTAATTTTTAGAAAAATAAA+TGG | - | chr7_4:53546783-53546802 | None:intergenic | 10.0% |
| !! | TTATTAATATAAACATATAC+GGG | + | chr7_4:53546908-53546927 | Msa1162750:intron | 10.0% |
| !!! | AATTTTTATCAATATAACAT+GGG | + | chr7_4:53547685-53547704 | Msa1162750:CDS | 10.0% |
| !!! | CTAATTTTTAGAAAAATAAA+TGG | - | chr7_4:53546783-53546802 | None:intergenic | 10.0% |
| !! | TTATTAATATAAACATATAC+GGG | + | chr7_4:53546908-53546927 | Msa1162750:intron | 10.0% |
| !!! | AATTTTTATCAATATAACAT+GGG | + | chr7_4:53547685-53547704 | Msa1162750:CDS | 10.0% |
| !!! | ATAAGCAAATTTTACTTTTT+AGG | - | chr7_4:53547045-53547064 | None:intergenic | 15.0% |
| !!! | AATTTGCTTATAAAAAGAAA+TGG | + | chr7_4:53547143-53547162 | Msa1162750:intron | 15.0% |
| !! | ATGTTAAATATACTTATTGT+GGG | - | chr7_4:53547246-53547265 | None:intergenic | 15.0% |
| !! | AATGTTAAATATACTTATTG+TGG | - | chr7_4:53547247-53547266 | None:intergenic | 15.0% |
| !! | TTCTACTAAATTAATGTAAT+TGG | + | chr7_4:53547267-53547286 | Msa1162750:intron | 15.0% |
| !!! | CAATTTTTATCAATATAACA+TGG | + | chr7_4:53547684-53547703 | Msa1162750:CDS | 15.0% |
| !!! | ATTTTTATCAATATAACATG+GGG | + | chr7_4:53547686-53547705 | Msa1162750:CDS | 15.0% |
| !!! | TAACTATACATTTTTGTTTA+AGG | + | chr7_4:53547910-53547929 | Msa1162750:intron | 15.0% |
| !!! | TTTTTTTTAATTACTTGTGT+CGG | + | chr7_4:53548231-53548250 | Msa1162750:intron | 15.0% |
| !!! | ATAAGCAAATTTTACTTTTT+AGG | - | chr7_4:53547045-53547064 | None:intergenic | 15.0% |
| !!! | AATTTGCTTATAAAAAGAAA+TGG | + | chr7_4:53547143-53547162 | Msa1162750:intron | 15.0% |
| !! | ATGTTAAATATACTTATTGT+GGG | - | chr7_4:53547246-53547265 | None:intergenic | 15.0% |
| !! | AATGTTAAATATACTTATTG+TGG | - | chr7_4:53547247-53547266 | None:intergenic | 15.0% |
| !! | TTCTACTAAATTAATGTAAT+TGG | + | chr7_4:53547267-53547286 | Msa1162750:intron | 15.0% |
| !!! | CAATTTTTATCAATATAACA+TGG | + | chr7_4:53547684-53547703 | Msa1162750:CDS | 15.0% |
| !!! | ATTTTTATCAATATAACATG+GGG | + | chr7_4:53547686-53547705 | Msa1162750:CDS | 15.0% |
| !!! | TAACTATACATTTTTGTTTA+AGG | + | chr7_4:53547910-53547929 | Msa1162750:intron | 15.0% |
| !!! | TTTTTTTTAATTACTTGTGT+CGG | + | chr7_4:53548231-53548250 | Msa1162750:intron | 15.0% |
| !! | GTCTAATATACATACATTAT+TGG | + | chr7_4:53546585-53546604 | Msa1162750:CDS | 20.0% |
| !! | CAAATCTATATATTCAGAAT+AGG | + | chr7_4:53546805-53546824 | Msa1162750:intron | 20.0% |
| !! | AGACTTAAAAAAAATCTACT+AGG | - | chr7_4:53546947-53546966 | None:intergenic | 20.0% |
| !! | ACTAAATTAATGTAATTGGA+AGG | + | chr7_4:53547271-53547290 | Msa1162750:intron | 20.0% |
| !! | TTCAATTGAAGATATAGTAT+GGG | - | chr7_4:53547480-53547499 | None:intergenic | 20.0% |
| !!! | TAAAAGTTCTTTTAACTCAT+TGG | + | chr7_4:53547960-53547979 | Msa1162750:intron | 20.0% |
| !! | TTACAAAAATACAATACGAA+GGG | - | chr7_4:53548717-53548736 | None:intergenic | 20.0% |
| !! | ATTACAAAAATACAATACGA+AGG | - | chr7_4:53548718-53548737 | None:intergenic | 20.0% |
| !! | GTCTAATATACATACATTAT+TGG | + | chr7_4:53546585-53546604 | Msa1162750:CDS | 20.0% |
| !! | CAAATCTATATATTCAGAAT+AGG | + | chr7_4:53546805-53546824 | Msa1162750:intron | 20.0% |
| !! | AGACTTAAAAAAAATCTACT+AGG | - | chr7_4:53546947-53546966 | None:intergenic | 20.0% |
| !! | ACTAAATTAATGTAATTGGA+AGG | + | chr7_4:53547271-53547290 | Msa1162750:intron | 20.0% |
| !! | TTCAATTGAAGATATAGTAT+GGG | - | chr7_4:53547480-53547499 | None:intergenic | 20.0% |
| !!! | TAAAAGTTCTTTTAACTCAT+TGG | + | chr7_4:53547960-53547979 | Msa1162750:intron | 20.0% |
| !! | TTACAAAAATACAATACGAA+GGG | - | chr7_4:53548717-53548736 | None:intergenic | 20.0% |
| !! | ATTACAAAAATACAATACGA+AGG | - | chr7_4:53548718-53548737 | None:intergenic | 20.0% |
| !! | GAAAACGTTCAATTTTCATA+AGG | - | chr7_4:53546636-53546655 | None:intergenic | 25.0% |
| !! | TGCATAAATTTGAAATCCAT+TGG | + | chr7_4:53546744-53546763 | Msa1162750:intron | 25.0% |
| ! | TGGTGAAAAAAAAAATCCAA+TGG | - | chr7_4:53546763-53546782 | None:intergenic | 25.0% |
| ! | TATATATTCAGAATAGGTCA+CGG | + | chr7_4:53546811-53546830 | Msa1162750:intron | 25.0% |
| ! | TAATATAAACATATACGGGA+CGG | + | chr7_4:53546912-53546931 | Msa1162750:intron | 25.0% |
| ! | TGCTTATAAAAAGAAACAGA+GGG | - | chr7_4:53547032-53547051 | None:intergenic | 25.0% |
| ! | TTGCTTATAAAAAGAAACAG+AGG | - | chr7_4:53547033-53547052 | None:intergenic | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | + | chr7_4:53547070-53547089 | Msa1162750:intron | 25.0% |
| ! | TTGCTTATAAAAAGAAATGG+AGG | + | chr7_4:53547146-53547165 | Msa1162750:intron | 25.0% |
| ! | TGCTTATAAAAAGAAATGGA+GGG | + | chr7_4:53547147-53547166 | Msa1162750:intron | 25.0% |
| !! | TGTTTTGCACATTAATTGTA+TGG | + | chr7_4:53547325-53547344 | Msa1162750:intron | 25.0% |
| ! | GTTCAATTGAAGATATAGTA+TGG | - | chr7_4:53547481-53547500 | None:intergenic | 25.0% |
| !!! | ATTGTGATATTTTGGAAGAA+TGG | - | chr7_4:53547554-53547573 | None:intergenic | 25.0% |
| !! | TCCAAAAATGAATACCTTTT+TGG | + | chr7_4:53547788-53547807 | Msa1162750:CDS | 25.0% |
| ! | ATTTGATGTGCTTACATAAT+AGG | - | chr7_4:53547870-53547889 | None:intergenic | 25.0% |
| ! | TTAATTCAGCTATCATCAAA+AGG | + | chr7_4:53547998-53548017 | Msa1162750:intron | 25.0% |
| !! | GAAATTGACTTTGAATTCTT+AGG | + | chr7_4:53548034-53548053 | Msa1162750:CDS | 25.0% |
| !!! | TTTATTTTTCAGTTTCTCTG+TGG | + | chr7_4:53548283-53548302 | Msa1162750:intron | 25.0% |
| ! | ATGTTCTTGAATTCTCTAAT+TGG | - | chr7_4:53548317-53548336 | None:intergenic | 25.0% |
| ! | AATTAGAGAATTCAAGAACA+TGG | + | chr7_4:53548316-53548335 | Msa1162750:CDS | 25.0% |
| !! | ATTAGCATTGAAGTTTCTAT+AGG | - | chr7_4:53548471-53548490 | None:intergenic | 25.0% |
| ! | CTATAAAGAATCCATTTCTA+TGG | + | chr7_4:53548773-53548792 | Msa1162750:three_prime_UTR | 25.0% |
| !! | GAAAACGTTCAATTTTCATA+AGG | - | chr7_4:53546636-53546655 | None:intergenic | 25.0% |
| !! | TGCATAAATTTGAAATCCAT+TGG | + | chr7_4:53546744-53546763 | Msa1162750:intron | 25.0% |
| ! | TGGTGAAAAAAAAAATCCAA+TGG | - | chr7_4:53546763-53546782 | None:intergenic | 25.0% |
| ! | TATATATTCAGAATAGGTCA+CGG | + | chr7_4:53546811-53546830 | Msa1162750:intron | 25.0% |
| ! | TAATATAAACATATACGGGA+CGG | + | chr7_4:53546912-53546931 | Msa1162750:intron | 25.0% |
| ! | TGCTTATAAAAAGAAACAGA+GGG | - | chr7_4:53547032-53547051 | None:intergenic | 25.0% |
| ! | TTGCTTATAAAAAGAAACAG+AGG | - | chr7_4:53547033-53547052 | None:intergenic | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | + | chr7_4:53547070-53547089 | Msa1162750:intron | 25.0% |
| ! | TTGCTTATAAAAAGAAATGG+AGG | + | chr7_4:53547146-53547165 | Msa1162750:intron | 25.0% |
| ! | TGCTTATAAAAAGAAATGGA+GGG | + | chr7_4:53547147-53547166 | Msa1162750:intron | 25.0% |
| !! | TGTTTTGCACATTAATTGTA+TGG | + | chr7_4:53547325-53547344 | Msa1162750:intron | 25.0% |
| ! | GTTCAATTGAAGATATAGTA+TGG | - | chr7_4:53547481-53547500 | None:intergenic | 25.0% |
| !!! | ATTGTGATATTTTGGAAGAA+TGG | - | chr7_4:53547554-53547573 | None:intergenic | 25.0% |
| !! | TCCAAAAATGAATACCTTTT+TGG | + | chr7_4:53547788-53547807 | Msa1162750:CDS | 25.0% |
| ! | ATTTGATGTGCTTACATAAT+AGG | - | chr7_4:53547870-53547889 | None:intergenic | 25.0% |
| ! | TTAATTCAGCTATCATCAAA+AGG | + | chr7_4:53547998-53548017 | Msa1162750:intron | 25.0% |
| !! | GAAATTGACTTTGAATTCTT+AGG | + | chr7_4:53548034-53548053 | Msa1162750:CDS | 25.0% |
| !!! | TTTATTTTTCAGTTTCTCTG+TGG | + | chr7_4:53548283-53548302 | Msa1162750:intron | 25.0% |
| ! | ATGTTCTTGAATTCTCTAAT+TGG | - | chr7_4:53548317-53548336 | None:intergenic | 25.0% |
| ! | AATTAGAGAATTCAAGAACA+TGG | + | chr7_4:53548316-53548335 | Msa1162750:CDS | 25.0% |
| !! | ATTAGCATTGAAGTTTCTAT+AGG | - | chr7_4:53548471-53548490 | None:intergenic | 25.0% |
| ! | CTATAAAGAATCCATTTCTA+TGG | + | chr7_4:53548773-53548792 | Msa1162750:three_prime_UTR | 25.0% |
| TTAAGACAAGTATAGATCCT+GGG | - | chr7_4:53546562-53546581 | None:intergenic | 30.0% | |
| ! | TTTAAGACAAGTATAGATCC+TGG | - | chr7_4:53546563-53546582 | None:intergenic | 30.0% |
| ! | ATGAAAATTGAACGTTTTCG+CGG | + | chr7_4:53546637-53546656 | Msa1162750:CDS | 30.0% |
| AAAAATCTACTAGGTTTGTC+AGG | - | chr7_4:53546938-53546957 | None:intergenic | 30.0% | |
| !! | GAGGGAGTATTATATAAGTT+AGG | - | chr7_4:53547014-53547033 | None:intergenic | 30.0% |
| GATGTATGTGGTTCATATTA+TGG | + | chr7_4:53547082-53547101 | Msa1162750:intron | 30.0% | |
| !! | GAGTCAAATTTTAAGTAGAC+CGG | + | chr7_4:53547187-53547206 | Msa1162750:intron | 30.0% |
| ACTTATTGTGGGAATATGTT+AGG | - | chr7_4:53547235-53547254 | None:intergenic | 30.0% | |
| AAGAAAGGAAAGTTAGAAGA+AGG | - | chr7_4:53547503-53547522 | None:intergenic | 30.0% | |
| ! | CAAGGTATTTATAGGGTTTA+GGG | - | chr7_4:53547531-53547550 | None:intergenic | 30.0% |
| ! | AGAATGGCAAGGTATTTATA+GGG | - | chr7_4:53547538-53547557 | None:intergenic | 30.0% |
| ! | AAGAATGGCAAGGTATTTAT+AGG | - | chr7_4:53547539-53547558 | None:intergenic | 30.0% |
| !!! | GTTGATGGATTGTGATATTT+TGG | - | chr7_4:53547562-53547581 | None:intergenic | 30.0% |
| ! | AAAAATCCATTAGCTTCCAA+TGG | + | chr7_4:53547600-53547619 | Msa1162750:intron | 30.0% |
| !!! | GCCAAAAAGGTATTCATTTT+TGG | - | chr7_4:53547792-53547811 | None:intergenic | 30.0% |
| ! | GCATATCAATTTTGCCAAAA+AGG | - | chr7_4:53547805-53547824 | None:intergenic | 30.0% |
| CATTGGTATGAAGAATGTAT+GGG | - | chr7_4:53548075-53548094 | None:intergenic | 30.0% | |
| ACATTGGTATGAAGAATGTA+TGG | - | chr7_4:53548076-53548095 | None:intergenic | 30.0% | |
| TTCAAGAACATGGAATCAAA+TGG | + | chr7_4:53548326-53548345 | Msa1162750:CDS | 30.0% | |
| !!! | ATTCTCATTGGTTGGTTTTT+GGG | - | chr7_4:53548362-53548381 | None:intergenic | 30.0% |
| TAGAATAGATTCTCATTGGT+TGG | - | chr7_4:53548370-53548389 | None:intergenic | 30.0% | |
| AGACTAGAATAGATTCTCAT+TGG | - | chr7_4:53548374-53548393 | None:intergenic | 30.0% | |
| ! | TGAGAATCTATTCTAGTCTT+TGG | + | chr7_4:53548375-53548394 | Msa1162750:CDS | 30.0% |
| TTAAGACAAGTATAGATCCT+GGG | - | chr7_4:53546562-53546581 | None:intergenic | 30.0% | |
| ! | TTTAAGACAAGTATAGATCC+TGG | - | chr7_4:53546563-53546582 | None:intergenic | 30.0% |
| ! | ATGAAAATTGAACGTTTTCG+CGG | + | chr7_4:53546637-53546656 | Msa1162750:CDS | 30.0% |
| AAAAATCTACTAGGTTTGTC+AGG | - | chr7_4:53546938-53546957 | None:intergenic | 30.0% | |
| !! | GAGGGAGTATTATATAAGTT+AGG | - | chr7_4:53547014-53547033 | None:intergenic | 30.0% |
| GATGTATGTGGTTCATATTA+TGG | + | chr7_4:53547082-53547101 | Msa1162750:intron | 30.0% | |
| !! | GAGTCAAATTTTAAGTAGAC+CGG | + | chr7_4:53547187-53547206 | Msa1162750:intron | 30.0% |
| ACTTATTGTGGGAATATGTT+AGG | - | chr7_4:53547235-53547254 | None:intergenic | 30.0% | |
| AAGAAAGGAAAGTTAGAAGA+AGG | - | chr7_4:53547503-53547522 | None:intergenic | 30.0% | |
| ! | CAAGGTATTTATAGGGTTTA+GGG | - | chr7_4:53547531-53547550 | None:intergenic | 30.0% |
| ! | AGAATGGCAAGGTATTTATA+GGG | - | chr7_4:53547538-53547557 | None:intergenic | 30.0% |
| ! | AAGAATGGCAAGGTATTTAT+AGG | - | chr7_4:53547539-53547558 | None:intergenic | 30.0% |
| !!! | GTTGATGGATTGTGATATTT+TGG | - | chr7_4:53547562-53547581 | None:intergenic | 30.0% |
| ! | AAAAATCCATTAGCTTCCAA+TGG | + | chr7_4:53547600-53547619 | Msa1162750:intron | 30.0% |
| !!! | GCCAAAAAGGTATTCATTTT+TGG | - | chr7_4:53547792-53547811 | None:intergenic | 30.0% |
| ! | GCATATCAATTTTGCCAAAA+AGG | - | chr7_4:53547805-53547824 | None:intergenic | 30.0% |
| CATTGGTATGAAGAATGTAT+GGG | - | chr7_4:53548075-53548094 | None:intergenic | 30.0% | |
| ACATTGGTATGAAGAATGTA+TGG | - | chr7_4:53548076-53548095 | None:intergenic | 30.0% | |
| TTCAAGAACATGGAATCAAA+TGG | + | chr7_4:53548326-53548345 | Msa1162750:CDS | 30.0% | |
| !!! | ATTCTCATTGGTTGGTTTTT+GGG | - | chr7_4:53548362-53548381 | None:intergenic | 30.0% |
| TAGAATAGATTCTCATTGGT+TGG | - | chr7_4:53548370-53548389 | None:intergenic | 30.0% | |
| AGACTAGAATAGATTCTCAT+TGG | - | chr7_4:53548374-53548393 | None:intergenic | 30.0% | |
| ! | TGAGAATCTATTCTAGTCTT+TGG | + | chr7_4:53548375-53548394 | Msa1162750:CDS | 30.0% |
| ! | CAAACGTGTACACATACTTT+TGG | - | chr7_4:53546874-53546893 | None:intergenic | 35.0% |
| AAGTATGTGTACACGTTTGA+AGG | + | chr7_4:53546875-53546894 | Msa1162750:intron | 35.0% | |
| AGACGATAGGATTTGATCAA+AGG | + | chr7_4:53547295-53547314 | Msa1162750:intron | 35.0% | |
| TTGCACATTAATTGTATGGC+TGG | + | chr7_4:53547329-53547348 | Msa1162750:intron | 35.0% | |
| ! | TTAATTGTATGGCTGGCTAT+TGG | + | chr7_4:53547336-53547355 | Msa1162750:intron | 35.0% |
| ! | TAATTGTATGGCTGGCTATT+GGG | + | chr7_4:53547337-53547356 | Msa1162750:intron | 35.0% |
| TGTGATGATATCATTTGGGT+GGG | + | chr7_4:53547386-53547405 | Msa1162750:intron | 35.0% | |
| AAGTAAAAGCTGGTTGGATT+TGG | - | chr7_4:53547424-53547443 | None:intergenic | 35.0% | |
| !! | ATAGTATGGGTGTTGAAAGT+TGG | - | chr7_4:53547467-53547486 | None:intergenic | 35.0% |
| ! | GCAAGGTATTTATAGGGTTT+AGG | - | chr7_4:53547532-53547551 | None:intergenic | 35.0% |
| !! | GATATTTTGGAAGAATGGCA+AGG | - | chr7_4:53547549-53547568 | None:intergenic | 35.0% |
| AAAATGCCATTGGAAGCTAA+TGG | - | chr7_4:53547609-53547628 | None:intergenic | 35.0% | |
| CTGTAGAGATCAAAATGACT+AGG | - | chr7_4:53547645-53547664 | None:intergenic | 35.0% | |
| TTGATAAAAATTGCCAGCAG+AGG | - | chr7_4:53547677-53547696 | None:intergenic | 35.0% | |
| CGTGCTAAAATACTCAACAA+TGG | + | chr7_4:53547716-53547735 | Msa1162750:CDS | 35.0% | |
| CAAGAGACAAAGTAAGAAGT+TGG | - | chr7_4:53547742-53547761 | None:intergenic | 35.0% | |
| ATTCAGCTATCATCAAAAGG+AGG | + | chr7_4:53548001-53548020 | Msa1162750:intron | 35.0% | |
| GAATTCTTAGGAAACTTGAG+TGG | + | chr7_4:53548046-53548065 | Msa1162750:CDS | 35.0% | |
| ! | TTTTCCTTGGCTAAACACAT+TGG | - | chr7_4:53548092-53548111 | None:intergenic | 35.0% |
| AATGTGTTTAGCCAAGGAAA+AGG | + | chr7_4:53548091-53548110 | Msa1162750:CDS | 35.0% | |
| !! | TTTTTCAGTTTCTCTGTGGA+TGG | + | chr7_4:53548287-53548306 | Msa1162750:intron | 35.0% |
| !!! | ATTGGTTGGTTTTTGGGAAA+TGG | - | chr7_4:53548356-53548375 | None:intergenic | 35.0% |
| !!! | GATTCTCATTGGTTGGTTTT+TGG | - | chr7_4:53548363-53548382 | None:intergenic | 35.0% |
| !! | TCTTTGGAATGCTGATGATT+GGG | + | chr7_4:53548391-53548410 | Msa1162750:CDS | 35.0% |
| TTTCTATAGGAAGCAGTGAA+AGG | - | chr7_4:53548458-53548477 | None:intergenic | 35.0% | |
| CACAGTCTAATAAGAATGCT+TGG | + | chr7_4:53548531-53548550 | Msa1162750:CDS | 35.0% | |
| TGATACCAAAAGATTTCCTC+AGG | + | chr7_4:53548634-53548653 | Msa1162750:CDS | 35.0% | |
| GATACCAAAAGATTTCCTCA+GGG | + | chr7_4:53548635-53548654 | Msa1162750:CDS | 35.0% | |
| AAATACAATACGAAGGGTTG+AGG | - | chr7_4:53548711-53548730 | None:intergenic | 35.0% | |
| ! | CAAACGTGTACACATACTTT+TGG | - | chr7_4:53546874-53546893 | None:intergenic | 35.0% |
| AAGTATGTGTACACGTTTGA+AGG | + | chr7_4:53546875-53546894 | Msa1162750:intron | 35.0% | |
| AGACGATAGGATTTGATCAA+AGG | + | chr7_4:53547295-53547314 | Msa1162750:intron | 35.0% | |
| TTGCACATTAATTGTATGGC+TGG | + | chr7_4:53547329-53547348 | Msa1162750:intron | 35.0% | |
| ! | TTAATTGTATGGCTGGCTAT+TGG | + | chr7_4:53547336-53547355 | Msa1162750:intron | 35.0% |
| ! | TAATTGTATGGCTGGCTATT+GGG | + | chr7_4:53547337-53547356 | Msa1162750:intron | 35.0% |
| TGTGATGATATCATTTGGGT+GGG | + | chr7_4:53547386-53547405 | Msa1162750:intron | 35.0% | |
| AAGTAAAAGCTGGTTGGATT+TGG | - | chr7_4:53547424-53547443 | None:intergenic | 35.0% | |
| !! | ATAGTATGGGTGTTGAAAGT+TGG | - | chr7_4:53547467-53547486 | None:intergenic | 35.0% |
| ! | GCAAGGTATTTATAGGGTTT+AGG | - | chr7_4:53547532-53547551 | None:intergenic | 35.0% |
| !! | GATATTTTGGAAGAATGGCA+AGG | - | chr7_4:53547549-53547568 | None:intergenic | 35.0% |
| AAAATGCCATTGGAAGCTAA+TGG | - | chr7_4:53547609-53547628 | None:intergenic | 35.0% | |
| CTGTAGAGATCAAAATGACT+AGG | - | chr7_4:53547645-53547664 | None:intergenic | 35.0% | |
| TTGATAAAAATTGCCAGCAG+AGG | - | chr7_4:53547677-53547696 | None:intergenic | 35.0% | |
| CGTGCTAAAATACTCAACAA+TGG | + | chr7_4:53547716-53547735 | Msa1162750:CDS | 35.0% | |
| CAAGAGACAAAGTAAGAAGT+TGG | - | chr7_4:53547742-53547761 | None:intergenic | 35.0% | |
| ATTCAGCTATCATCAAAAGG+AGG | + | chr7_4:53548001-53548020 | Msa1162750:intron | 35.0% | |
| GAATTCTTAGGAAACTTGAG+TGG | + | chr7_4:53548046-53548065 | Msa1162750:CDS | 35.0% | |
| ! | TTTTCCTTGGCTAAACACAT+TGG | - | chr7_4:53548092-53548111 | None:intergenic | 35.0% |
| AATGTGTTTAGCCAAGGAAA+AGG | + | chr7_4:53548091-53548110 | Msa1162750:CDS | 35.0% | |
| !! | TTTTTCAGTTTCTCTGTGGA+TGG | + | chr7_4:53548287-53548306 | Msa1162750:intron | 35.0% |
| !!! | ATTGGTTGGTTTTTGGGAAA+TGG | - | chr7_4:53548356-53548375 | None:intergenic | 35.0% |
| !!! | GATTCTCATTGGTTGGTTTT+TGG | - | chr7_4:53548363-53548382 | None:intergenic | 35.0% |
| !! | TCTTTGGAATGCTGATGATT+GGG | + | chr7_4:53548391-53548410 | Msa1162750:CDS | 35.0% |
| TTTCTATAGGAAGCAGTGAA+AGG | - | chr7_4:53548458-53548477 | None:intergenic | 35.0% | |
| CACAGTCTAATAAGAATGCT+TGG | + | chr7_4:53548531-53548550 | Msa1162750:CDS | 35.0% | |
| TGATACCAAAAGATTTCCTC+AGG | + | chr7_4:53548634-53548653 | Msa1162750:CDS | 35.0% | |
| GATACCAAAAGATTTCCTCA+GGG | + | chr7_4:53548635-53548654 | Msa1162750:CDS | 35.0% | |
| AAATACAATACGAAGGGTTG+AGG | - | chr7_4:53548711-53548730 | None:intergenic | 35.0% | |
| ACCAATTAGAATTGTCTCCC+AGG | + | chr7_4:53546542-53546561 | Msa1162750:CDS | 40.0% | |
| TCCTGGGAGACAATTCTAAT+TGG | - | chr7_4:53546546-53546565 | None:intergenic | 40.0% | |
| ATTGTGGGAATATGTTAGGC+TGG | - | chr7_4:53547231-53547250 | None:intergenic | 40.0% | |
| GTAATTGGAAGGAAGACGAT+AGG | + | chr7_4:53547282-53547301 | Msa1162750:intron | 40.0% | |
| CGATAGGATTTGATCAAAGG+CGG | + | chr7_4:53547298-53547317 | Msa1162750:intron | 40.0% | |
| CCAAATGATATCATCACACG+CGG | - | chr7_4:53547384-53547403 | None:intergenic | 40.0% | |
| CGCGTGTGATGATATCATTT+GGG | + | chr7_4:53547382-53547401 | Msa1162750:intron | 40.0% | |
| GTGTGATGATATCATTTGGG+TGG | + | chr7_4:53547385-53547404 | Msa1162750:intron | 40.0% | |
| ! | AAGCTGGTTGGATTTGGTAT+AGG | - | chr7_4:53547418-53547437 | None:intergenic | 40.0% |
| TGGGTAAAGTAAAAGCTGGT+TGG | - | chr7_4:53547430-53547449 | None:intergenic | 40.0% | |
| !! | TTGAAAGTTGGTGAGGAATG+AGG | - | chr7_4:53547455-53547474 | None:intergenic | 40.0% |
| GTGAGAAAGTGAGATGTTGA+TGG | - | chr7_4:53547577-53547596 | None:intergenic | 40.0% | |
| GCAACTCTTGAAAATGCCAT+TGG | - | chr7_4:53547619-53547638 | None:intergenic | 40.0% | |
| TTGTCTCTTGACAAATCCTC+TGG | + | chr7_4:53547752-53547771 | Msa1162750:CDS | 40.0% | |
| ! | TATCATCAAAAGGAGGTGCA+TGG | + | chr7_4:53548008-53548027 | Msa1162750:CDS | 40.0% |
| ! | ATCATCAAAAGGAGGTGCAT+GGG | + | chr7_4:53548009-53548028 | Msa1162750:CDS | 40.0% |
| CATACCAATGTGTTTAGCCA+AGG | + | chr7_4:53548085-53548104 | Msa1162750:CDS | 40.0% | |
| GAGAGCAACAATTCTACCTA+TGG | + | chr7_4:53548119-53548138 | Msa1162750:CDS | 40.0% | |
| AGGTGTGAAAATCTGCAGTT+GGG | - | chr7_4:53548150-53548169 | None:intergenic | 40.0% | |
| TAGGTGTGAAAATCTGCAGT+TGG | - | chr7_4:53548151-53548170 | None:intergenic | 40.0% | |
| GTACTTACACAATGCGTTGT+GGG | - | chr7_4:53548189-53548208 | None:intergenic | 40.0% | |
| AGTACTTACACAATGCGTTG+TGG | - | chr7_4:53548190-53548209 | None:intergenic | 40.0% | |
| !! | GTCTTTGGAATGCTGATGAT+TGG | + | chr7_4:53548390-53548409 | Msa1162750:CDS | 40.0% |
| !! | GTGGACTTGTTAAGACAGAT+TGG | + | chr7_4:53548423-53548442 | Msa1162750:CDS | 40.0% |
| ! | TAAGAATGCTTGGTTCTCAG+AGG | + | chr7_4:53548541-53548560 | Msa1162750:CDS | 40.0% |
| TGGATTCTACAAGTCATGAG+AGG | + | chr7_4:53548567-53548586 | Msa1162750:CDS | 40.0% | |
| TAAACCATCCTGCATTCTTG+AGG | - | chr7_4:53548665-53548684 | None:intergenic | 40.0% | |
| ACCAATTAGAATTGTCTCCC+AGG | + | chr7_4:53546542-53546561 | Msa1162750:CDS | 40.0% | |
| TCCTGGGAGACAATTCTAAT+TGG | - | chr7_4:53546546-53546565 | None:intergenic | 40.0% | |
| ATTGTGGGAATATGTTAGGC+TGG | - | chr7_4:53547231-53547250 | None:intergenic | 40.0% | |
| GTAATTGGAAGGAAGACGAT+AGG | + | chr7_4:53547282-53547301 | Msa1162750:intron | 40.0% | |
| CGATAGGATTTGATCAAAGG+CGG | + | chr7_4:53547298-53547317 | Msa1162750:intron | 40.0% | |
| CCAAATGATATCATCACACG+CGG | - | chr7_4:53547384-53547403 | None:intergenic | 40.0% | |
| CGCGTGTGATGATATCATTT+GGG | + | chr7_4:53547382-53547401 | Msa1162750:intron | 40.0% | |
| GTGTGATGATATCATTTGGG+TGG | + | chr7_4:53547385-53547404 | Msa1162750:intron | 40.0% | |
| ! | AAGCTGGTTGGATTTGGTAT+AGG | - | chr7_4:53547418-53547437 | None:intergenic | 40.0% |
| TGGGTAAAGTAAAAGCTGGT+TGG | - | chr7_4:53547430-53547449 | None:intergenic | 40.0% | |
| !! | TTGAAAGTTGGTGAGGAATG+AGG | - | chr7_4:53547455-53547474 | None:intergenic | 40.0% |
| GTGAGAAAGTGAGATGTTGA+TGG | - | chr7_4:53547577-53547596 | None:intergenic | 40.0% | |
| GCAACTCTTGAAAATGCCAT+TGG | - | chr7_4:53547619-53547638 | None:intergenic | 40.0% | |
| TTGTCTCTTGACAAATCCTC+TGG | + | chr7_4:53547752-53547771 | Msa1162750:CDS | 40.0% | |
| ! | TATCATCAAAAGGAGGTGCA+TGG | + | chr7_4:53548008-53548027 | Msa1162750:CDS | 40.0% |
| ! | ATCATCAAAAGGAGGTGCAT+GGG | + | chr7_4:53548009-53548028 | Msa1162750:CDS | 40.0% |
| CATACCAATGTGTTTAGCCA+AGG | + | chr7_4:53548085-53548104 | Msa1162750:CDS | 40.0% | |
| GAGAGCAACAATTCTACCTA+TGG | + | chr7_4:53548119-53548138 | Msa1162750:CDS | 40.0% | |
| AGGTGTGAAAATCTGCAGTT+GGG | - | chr7_4:53548150-53548169 | None:intergenic | 40.0% | |
| TAGGTGTGAAAATCTGCAGT+TGG | - | chr7_4:53548151-53548170 | None:intergenic | 40.0% | |
| GTACTTACACAATGCGTTGT+GGG | - | chr7_4:53548189-53548208 | None:intergenic | 40.0% | |
| AGTACTTACACAATGCGTTG+TGG | - | chr7_4:53548190-53548209 | None:intergenic | 40.0% | |
| !! | GTCTTTGGAATGCTGATGAT+TGG | + | chr7_4:53548390-53548409 | Msa1162750:CDS | 40.0% |
| !! | GTGGACTTGTTAAGACAGAT+TGG | + | chr7_4:53548423-53548442 | Msa1162750:CDS | 40.0% |
| ! | TAAGAATGCTTGGTTCTCAG+AGG | + | chr7_4:53548541-53548560 | Msa1162750:CDS | 40.0% |
| TGGATTCTACAAGTCATGAG+AGG | + | chr7_4:53548567-53548586 | Msa1162750:CDS | 40.0% | |
| TAAACCATCCTGCATTCTTG+AGG | - | chr7_4:53548665-53548684 | None:intergenic | 40.0% | |
| ATGGAGGGAGTAAACGAGAT+AGG | + | chr7_4:53547162-53547181 | Msa1162750:intron | 45.0% | |
| CCGCGTGTGATGATATCATT+TGG | + | chr7_4:53547381-53547400 | Msa1162750:intron | 45.0% | |
| ! | CTGGTTGGATTTGGTATAGG+TGG | - | chr7_4:53547415-53547434 | None:intergenic | 45.0% |
| GGAGTGGGTAAAGTAAAAGC+TGG | - | chr7_4:53547434-53547453 | None:intergenic | 45.0% | |
| !! | ATGGGTGTTGAAAGTTGGTG+AGG | - | chr7_4:53547462-53547481 | None:intergenic | 45.0% |
| ! | GGGTTTAGGGTGCAAAAGAA+AGG | - | chr7_4:53547518-53547537 | None:intergenic | 45.0% |
| ATGCAGCTTAAACTCGTTCC+TGG | + | chr7_4:53547821-53547840 | Msa1162750:CDS | 45.0% | |
| TTCACACCTATTCCATCCTC+TGG | + | chr7_4:53548161-53548180 | Msa1162750:CDS | 45.0% | |
| CTTAACAAGTCCACCTCTTG+TGG | - | chr7_4:53548417-53548436 | None:intergenic | 45.0% | |
| AATGCATGCACTGTGTCTTC+TGG | + | chr7_4:53548488-53548507 | Msa1162750:CDS | 45.0% | |
| AAGTCATGAGAGGCTCAAGT+GGG | + | chr7_4:53548577-53548596 | Msa1162750:CDS | 45.0% | |
| ! | AAGGCCCTGAGGAAATCTTT+TGG | - | chr7_4:53548642-53548661 | None:intergenic | 45.0% |
| ATGGAGGGAGTAAACGAGAT+AGG | + | chr7_4:53547162-53547181 | Msa1162750:intron | 45.0% | |
| CCGCGTGTGATGATATCATT+TGG | + | chr7_4:53547381-53547400 | Msa1162750:intron | 45.0% | |
| ! | CTGGTTGGATTTGGTATAGG+TGG | - | chr7_4:53547415-53547434 | None:intergenic | 45.0% |
| GGAGTGGGTAAAGTAAAAGC+TGG | - | chr7_4:53547434-53547453 | None:intergenic | 45.0% | |
| !! | ATGGGTGTTGAAAGTTGGTG+AGG | - | chr7_4:53547462-53547481 | None:intergenic | 45.0% |
| ! | GGGTTTAGGGTGCAAAAGAA+AGG | - | chr7_4:53547518-53547537 | None:intergenic | 45.0% |
| ATGCAGCTTAAACTCGTTCC+TGG | + | chr7_4:53547821-53547840 | Msa1162750:CDS | 45.0% | |
| TTCACACCTATTCCATCCTC+TGG | + | chr7_4:53548161-53548180 | Msa1162750:CDS | 45.0% | |
| CTTAACAAGTCCACCTCTTG+TGG | - | chr7_4:53548417-53548436 | None:intergenic | 45.0% | |
| AATGCATGCACTGTGTCTTC+TGG | + | chr7_4:53548488-53548507 | Msa1162750:CDS | 45.0% | |
| AAGTCATGAGAGGCTCAAGT+GGG | + | chr7_4:53548577-53548596 | Msa1162750:CDS | 45.0% | |
| ! | AAGGCCCTGAGGAAATCTTT+TGG | - | chr7_4:53548642-53548661 | None:intergenic | 45.0% |
| !!! | TGTTTATATTAATAAATTTT+TGG | - | chr7_4:53546903-53546922 | None:intergenic | 5.0% |
| !! | TTTATTAATATAAACATATA+CGG | + | chr7_4:53546907-53546926 | Msa1162750:intron | 5.0% |
| !!! | ATTAAAAAAAATCAATTTTA+AGG | - | chr7_4:53548222-53548241 | None:intergenic | 5.0% |
| !!! | TGTTTATATTAATAAATTTT+TGG | - | chr7_4:53546903-53546922 | None:intergenic | 5.0% |
| !! | TTTATTAATATAAACATATA+CGG | + | chr7_4:53546907-53546926 | Msa1162750:intron | 5.0% |
| !!! | ATTAAAAAAAATCAATTTTA+AGG | - | chr7_4:53548222-53548241 | None:intergenic | 5.0% |
| GTCGTCATGAGTCTATGGTC+CGG | - | chr7_4:53547209-53547228 | None:intergenic | 50.0% | |
| ! | GTTGGTGAGGAATGAGGAGT+GGG | - | chr7_4:53547449-53547468 | None:intergenic | 50.0% |
| !! | AGTTGGTGAGGAATGAGGAG+TGG | - | chr7_4:53547450-53547469 | None:intergenic | 50.0% |
| ACAGTTGCAATTGCCTCTGC+TGG | + | chr7_4:53547661-53547680 | Msa1162750:intron | 50.0% | |
| ! | CTTGACAAATCCTCTGGCTC+TGG | + | chr7_4:53547758-53547777 | Msa1162750:CDS | 50.0% |
| ! | GCTCTCTGTTGCCTTTTCCT+TGG | - | chr7_4:53548105-53548124 | None:intergenic | 50.0% |
| CTGCAGTTGGGTCAAACCAT+AGG | - | chr7_4:53548138-53548157 | None:intergenic | 50.0% | |
| TGGGTTCCAGAGGATGGAAT+AGG | - | chr7_4:53548170-53548189 | None:intergenic | 50.0% | |
| ! | GGAAGCAGTGAAAGGAGCAT+TGG | - | chr7_4:53548450-53548469 | None:intergenic | 50.0% |
| ! | TGCTTGGTTCTCAGAGGAGT+TGG | + | chr7_4:53548547-53548566 | Msa1162750:CDS | 50.0% |
| CAAGTCATGAGAGGCTCAAG+TGG | + | chr7_4:53548576-53548595 | Msa1162750:CDS | 50.0% | |
| CCATCCTGCATTCTTGAGGA+AGG | - | chr7_4:53548661-53548680 | None:intergenic | 50.0% | |
| CCTTCCTCAAGAATGCAGGA+TGG | + | chr7_4:53548658-53548677 | Msa1162750:CDS | 50.0% | |
| GTCGTCATGAGTCTATGGTC+CGG | - | chr7_4:53547209-53547228 | None:intergenic | 50.0% | |
| ! | GTTGGTGAGGAATGAGGAGT+GGG | - | chr7_4:53547449-53547468 | None:intergenic | 50.0% |
| !! | AGTTGGTGAGGAATGAGGAG+TGG | - | chr7_4:53547450-53547469 | None:intergenic | 50.0% |
| ACAGTTGCAATTGCCTCTGC+TGG | + | chr7_4:53547661-53547680 | Msa1162750:intron | 50.0% | |
| ! | CTTGACAAATCCTCTGGCTC+TGG | + | chr7_4:53547758-53547777 | Msa1162750:CDS | 50.0% |
| ! | GCTCTCTGTTGCCTTTTCCT+TGG | - | chr7_4:53548105-53548124 | None:intergenic | 50.0% |
| CTGCAGTTGGGTCAAACCAT+AGG | - | chr7_4:53548138-53548157 | None:intergenic | 50.0% | |
| TGGGTTCCAGAGGATGGAAT+AGG | - | chr7_4:53548170-53548189 | None:intergenic | 50.0% | |
| ! | GGAAGCAGTGAAAGGAGCAT+TGG | - | chr7_4:53548450-53548469 | None:intergenic | 50.0% |
| ! | TGCTTGGTTCTCAGAGGAGT+TGG | + | chr7_4:53548547-53548566 | Msa1162750:CDS | 50.0% |
| CAAGTCATGAGAGGCTCAAG+TGG | + | chr7_4:53548576-53548595 | Msa1162750:CDS | 50.0% | |
| CCATCCTGCATTCTTGAGGA+AGG | - | chr7_4:53548661-53548680 | None:intergenic | 50.0% | |
| CCTTCCTCAAGAATGCAGGA+TGG | + | chr7_4:53548658-53548677 | Msa1162750:CDS | 50.0% | |
| ! | GGCTGGTCGTCATGAGTCTA+TGG | - | chr7_4:53547214-53547233 | None:intergenic | 55.0% |
| GGATTGAAAGCCAGAGCCAG+AGG | - | chr7_4:53547771-53547790 | None:intergenic | 55.0% | |
| CAATGCGTTGTGGGTTCCAG+AGG | - | chr7_4:53548180-53548199 | None:intergenic | 55.0% | |
| GCTGATGATTGGGCCACAAG+AGG | + | chr7_4:53548401-53548420 | Msa1162750:CDS | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | + | chr7_4:53548404-53548423 | Msa1162750:CDS | 55.0% | |
| CATTCTTGAGGAAGGCCCTG+AGG | - | chr7_4:53548653-53548672 | None:intergenic | 55.0% | |
| AGGGCCTTCCTCAAGAATGC+AGG | + | chr7_4:53548654-53548673 | Msa1162750:CDS | 55.0% | |
| ! | GGCTGGTCGTCATGAGTCTA+TGG | - | chr7_4:53547214-53547233 | None:intergenic | 55.0% |
| GGATTGAAAGCCAGAGCCAG+AGG | - | chr7_4:53547771-53547790 | None:intergenic | 55.0% | |
| CAATGCGTTGTGGGTTCCAG+AGG | - | chr7_4:53548180-53548199 | None:intergenic | 55.0% | |
| GCTGATGATTGGGCCACAAG+AGG | + | chr7_4:53548401-53548420 | Msa1162750:CDS | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | + | chr7_4:53548404-53548423 | Msa1162750:CDS | 55.0% | |
| CATTCTTGAGGAAGGCCCTG+AGG | - | chr7_4:53548653-53548672 | None:intergenic | 55.0% | |
| AGGGCCTTCCTCAAGAATGC+AGG | + | chr7_4:53548654-53548673 | Msa1162750:CDS | 55.0% | |
| CTCGTTCCTGGCAACTCTGC+TGG | + | chr7_4:53547833-53547852 | Msa1162750:CDS | 60.0% | |
| ACAGTGCCAGCAGAGTTGCC+AGG | - | chr7_4:53547842-53547861 | None:intergenic | 60.0% | |
| GCGTTGTGGGTTCCAGAGGA+TGG | - | chr7_4:53548176-53548195 | None:intergenic | 60.0% | |
| CTCGTTCCTGGCAACTCTGC+TGG | + | chr7_4:53547833-53547852 | Msa1162750:CDS | 60.0% | |
| ACAGTGCCAGCAGAGTTGCC+AGG | - | chr7_4:53547842-53547861 | None:intergenic | 60.0% | |
| GCGTTGTGGGTTCCAGAGGA+TGG | - | chr7_4:53548176-53548195 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 53546523 | 53548805 | 53546523 | ID=Msa1162750;Name=Msa1162750 |
| chr7_4 | mRNA | 53546523 | 53548805 | 53546523 | ID=Msa1162750-mRNA-1;Parent=Msa1162750;Name=Msa1162750-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.66|0.5|0.75|1|1|4|120|312 |
| chr7_4 | exon | 53546523 | 53546666 | 53546523 | ID=Msa1162750-mRNA-1:exon:15509;Parent=Msa1162750-mRNA-1 |
| chr7_4 | exon | 53547665 | 53547874 | 53547665 | ID=Msa1162750-mRNA-1:exon:15510;Parent=Msa1162750-mRNA-1 |
| chr7_4 | exon | 53548007 | 53548200 | 53548007 | ID=Msa1162750-mRNA-1:exon:15511;Parent=Msa1162750-mRNA-1 |
| chr7_4 | exon | 53548295 | 53548805 | 53548295 | ID=Msa1162750-mRNA-1:exon:15512;Parent=Msa1162750-mRNA-1 |
| chr7_4 | CDS | 53546523 | 53546666 | 53546523 | ID=Msa1162750-mRNA-1:cds;Parent=Msa1162750-mRNA-1 |
| chr7_4 | CDS | 53547665 | 53547874 | 53547665 | ID=Msa1162750-mRNA-1:cds;Parent=Msa1162750-mRNA-1 |
| chr7_4 | CDS | 53548007 | 53548200 | 53548007 | ID=Msa1162750-mRNA-1:cds;Parent=Msa1162750-mRNA-1 |
| chr7_4 | CDS | 53548295 | 53548685 | 53548295 | ID=Msa1162750-mRNA-1:cds;Parent=Msa1162750-mRNA-1 |
| chr7_4 | three_prime_UTR | 53548686 | 53548805 | 53548686 | ID=Msa1162750-mRNA-1:three_prime_utr;Parent=Msa1162750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
