Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075320 | XP_003625289.1 | 98.636 | 220 | 3 | 0 | 1 | 220 | 1 | 220 | 9.24e-159 | 452 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075320 | sp|Q38910|XTH23_ARATH | 73.387 | 248 | 62 | 2 | 3 | 249 | 4 | 248 | 8.52e-132 | 377 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075320 | G7KW97 | 98.636 | 220 | 3 | 0 | 1 | 220 | 1 | 220 | 4.41e-159 | 452 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011040 | Msa1075320 | 0.803597 | 3.230555e-49 | -8.615850e-47 |
| Msa0024650 | Msa1075320 | 0.807219 | 5.624165e-50 | -8.615850e-47 |
| Msa0025570 | Msa1075320 | 0.814002 | 1.922585e-51 | -8.615850e-47 |
| Msa0045810 | Msa1075320 | 0.804468 | 2.129272e-49 | -8.615850e-47 |
| Msa0073110 | Msa1075320 | 0.821355 | 4.220479e-53 | -8.615850e-47 |
| Msa0092220 | Msa1075320 | 0.806001 | 1.016989e-49 | -8.615850e-47 |
| Msa0106540 | Msa1075320 | 0.807604 | 4.659749e-50 | -8.615850e-47 |
| Msa0108350 | Msa1075320 | 0.803637 | 3.169441e-49 | -8.615850e-47 |
| Msa0120450 | Msa1075320 | 0.840367 | 9.073078e-58 | -8.615850e-47 |
| Msa0609460 | Msa1075320 | 0.805898 | 1.068675e-49 | -8.615850e-47 |
| Msa0616300 | Msa1075320 | 0.803485 | 3.408997e-49 | -8.615850e-47 |
| Msa0618700 | Msa1075320 | 0.803395 | 3.558609e-49 | -8.615850e-47 |
| Msa0647300 | Msa1075320 | 0.811361 | 7.274123e-51 | -8.615850e-47 |
| Msa0686830 | Msa1075320 | 0.813225 | 2.850506e-51 | -8.615850e-47 |
| Msa0698280 | Msa1075320 | 0.802737 | 4.866620e-49 | -8.615850e-47 |
| Msa0708680 | Msa1075320 | 0.816636 | 4.992468e-52 | -8.615850e-47 |
| Msa0720810 | Msa1075320 | 0.818769 | 1.649027e-52 | -8.615850e-47 |
| Msa0761950 | Msa1075320 | 0.818709 | 1.701531e-52 | -8.615850e-47 |
| Msa0798840 | Msa1075320 | 0.805270 | 1.447379e-49 | -8.615850e-47 |
| Msa0803880 | Msa1075320 | 0.821527 | 3.850747e-53 | -8.615850e-47 |
| Msa0831890 | Msa1075320 | 0.807401 | 5.147490e-50 | -8.615850e-47 |
| Msa0841930 | Msa1075320 | 0.803409 | 3.535362e-49 | -8.615850e-47 |
| Msa0121320 | Msa1075320 | 0.814931 | 1.197865e-51 | -8.615850e-47 |
| Msa0154460 | Msa1075320 | 0.813049 | 3.116573e-51 | -8.615850e-47 |
| Msa0166180 | Msa1075320 | 0.803944 | 2.737443e-49 | -8.615850e-47 |
| Msa0192470 | Msa1075320 | 0.833507 | 5.125327e-56 | -8.615850e-47 |
| Msa0207680 | Msa1075320 | 0.800217 | 1.598183e-48 | -8.615850e-47 |
| Msa0238110 | Msa1075320 | 0.806330 | 8.670566e-50 | -8.615850e-47 |
| Msa0374040 | Msa1075320 | 0.811378 | 7.215690e-51 | -8.615850e-47 |
| Msa0380110 | Msa1075320 | 0.802779 | 4.771449e-49 | -8.615850e-47 |
| Msa0409500 | Msa1075320 | 0.813732 | 2.205307e-51 | -8.615850e-47 |
| Msa0423220 | Msa1075320 | 0.800811 | 1.209492e-48 | -8.615850e-47 |
| Msa0448230 | Msa1075320 | 0.808013 | 3.815564e-50 | -8.615850e-47 |
| Msa0996980 | Msa1075320 | 0.800651 | 1.303925e-48 | -8.615850e-47 |
| Msa1006170 | Msa1075320 | 0.803626 | 3.186492e-49 | -8.615850e-47 |
| Msa1024420 | Msa1075320 | 0.800680 | 1.286364e-48 | -8.615850e-47 |
| Msa1029820 | Msa1075320 | 0.801076 | 1.067892e-48 | -8.615850e-47 |
| Msa1035450 | Msa1075320 | 0.864241 | 1.400997e-64 | -8.615850e-47 |
| Msa1041250 | Msa1075320 | 0.813277 | 2.776526e-51 | -8.615850e-47 |
| Msa1068730 | Msa1075320 | 0.821556 | 3.792037e-53 | -8.615850e-47 |
| Msa1075320 | Msa1106680 | 0.808785 | 2.610838e-50 | -8.615850e-47 |
| Msa1075320 | Msa1108560 | 0.824154 | 9.414017e-54 | -8.615850e-47 |
| Msa1075320 | Msa1116610 | 0.851267 | 9.922469e-61 | -8.615850e-47 |
| Msa1075320 | Msa1155610 | 0.811023 | 8.614476e-51 | -8.615850e-47 |
| Msa1075320 | Msa1157210 | 0.800479 | 1.413995e-48 | -8.615850e-47 |
| Msa1075320 | Msa1162750 | 0.927285 | 1.453232e-91 | -8.615850e-47 |
| Msa1075320 | Msa1165460 | 0.800276 | 1.554907e-48 | -8.615850e-47 |
| Msa1075320 | Msa1170340 | 0.826594 | 2.490159e-54 | -8.615850e-47 |
| Msa1075320 | Msa1181090 | 0.847390 | 1.191878e-59 | -8.615850e-47 |
| Msa1075320 | Msa1186340 | 0.801907 | 7.214586e-49 | -8.615850e-47 |
| Msa1075320 | Msa1191640 | 0.841459 | 4.690232e-58 | -8.615850e-47 |
| Msa1075320 | Msa1200270 | 0.806960 | 6.382171e-50 | -8.615850e-47 |
| Msa1075320 | Msa1200290 | 0.803785 | 2.953067e-49 | -8.615850e-47 |
| Msa1075320 | Msa1221290 | 0.808743 | 2.666210e-50 | -8.615850e-47 |
| Msa1075320 | Msa1225890 | 0.805554 | 1.262183e-49 | -8.615850e-47 |
| Msa1075320 | Msa1238250 | 0.804419 | 2.180116e-49 | -8.615850e-47 |
| Msa1075320 | Msa1263110 | 0.819245 | 1.285473e-52 | -8.615850e-47 |
| Msa1075320 | Msa1263120 | 0.801287 | 9.668737e-49 | -8.615850e-47 |
| Msa1075320 | Msa1267990 | 0.814713 | 1.339391e-51 | -8.615850e-47 |
| Msa1075320 | Msa1269500 | 0.804606 | 1.992293e-49 | -8.615850e-47 |
| Msa1075320 | Msa1283600 | 0.805276 | 1.443388e-49 | -8.615850e-47 |
| Msa1075320 | Msa1284020 | 0.823598 | 1.270950e-53 | -8.615850e-47 |
| Msa1075320 | Msa1319030 | 0.802256 | 6.114963e-49 | -8.615850e-47 |
| Msa1075320 | Msa1319190 | 0.812804 | 3.525356e-51 | -8.615850e-47 |
| Msa1075320 | Msa1321970 | 0.811335 | 7.371199e-51 | -8.615850e-47 |
| Msa1075320 | Msa1322500 | 0.816805 | 4.576555e-52 | -8.615850e-47 |
| Msa1075320 | Msa1322980 | 0.816755 | 4.696138e-52 | -8.615850e-47 |
| Msa1075320 | Msa1323260 | -0.811608 | 6.429630e-51 | -8.615850e-47 |
| Msa1075320 | Msa1337450 | 0.830689 | 2.549823e-55 | -8.615850e-47 |
| Msa1075320 | Msa1361980 | 0.801644 | 8.170759e-49 | -8.615850e-47 |
| Msa1075320 | Msa1380740 | 0.817798 | 2.735607e-52 | -8.615850e-47 |
| Msa1075320 | Msa1405830 | 0.807338 | 5.307017e-50 | -8.615850e-47 |
| Msa1075320 | Msa1407810 | 0.804373 | 2.228981e-49 | -8.615850e-47 |
| Msa1075320 | Msa1437780 | 0.804397 | 2.202718e-49 | -8.615850e-47 |
| Msa1075320 | Msa1441450 | 0.800671 | 1.291933e-48 | -8.615850e-47 |
| Msa1075320 | Msa1455360 | 0.803104 | 4.087783e-49 | -8.615850e-47 |
| Msa1075320 | Msa1461660 | 0.800392 | 1.472654e-48 | -8.615850e-47 |
| Msa0248320 | Msa1075320 | 0.804662 | 1.940195e-49 | -8.615850e-47 |
| Msa0261400 | Msa1075320 | 0.811434 | 7.015069e-51 | -8.615850e-47 |
| Msa0267400 | Msa1075320 | 0.928012 | 5.265516e-92 | -8.615850e-47 |
| Msa0272840 | Msa1075320 | 0.835825 | 1.338846e-56 | -8.615850e-47 |
| Msa0277520 | Msa1075320 | 0.812202 | 4.773402e-51 | -8.615850e-47 |
| Msa0299030 | Msa1075320 | 0.810416 | 1.165300e-50 | -8.615850e-47 |
| Msa0303900 | Msa1075320 | 0.814416 | 1.557756e-51 | -8.615850e-47 |
| Msa0333770 | Msa1075320 | 0.826412 | 2.752103e-54 | -8.615850e-47 |
| Msa0501080 | Msa1075320 | 0.822963 | 1.787644e-53 | -8.615850e-47 |
| Msa0502970 | Msa1075320 | 0.804409 | 2.190101e-49 | -8.615850e-47 |
| Msa0567330 | Msa1075320 | 0.812086 | 5.059017e-51 | -8.615850e-47 |
| Msa0576320 | Msa1075320 | 0.814961 | 1.179677e-51 | -8.615850e-47 |
| Msa0581370 | Msa1075320 | 0.807103 | 5.952377e-50 | -8.615850e-47 |
| Msa0583390 | Msa1075320 | 0.805497 | 1.297419e-49 | -8.615850e-47 |
| Msa0587870 | Msa1075320 | 0.808096 | 3.663279e-50 | -8.615850e-47 |
| Msa0591490 | Msa1075320 | 0.801239 | 9.887766e-49 | -8.615850e-47 |
| Msa0873880 | Msa1075320 | 0.801153 | 1.029891e-48 | -8.615850e-47 |
| Msa0873940 | Msa1075320 | 0.800159 | 1.642634e-48 | -8.615850e-47 |
| Msa0880910 | Msa1075320 | 0.817275 | 3.587702e-52 | -8.615850e-47 |
| Msa0896920 | Msa1075320 | 0.802485 | 5.486429e-49 | -8.615850e-47 |
| Msa0896950 | Msa1075320 | 0.807420 | 5.098564e-50 | -8.615850e-47 |
| Msa0898830 | Msa1075320 | -0.804008 | 2.654081e-49 | -8.615850e-47 |
| Msa0930210 | Msa1075320 | 0.817907 | 2.584168e-52 | -8.615850e-47 |
| Msa0932140 | Msa1075320 | 0.811833 | 5.744199e-51 | -8.615850e-47 |
| Msa0946010 | Msa1075320 | 0.807321 | 5.352064e-50 | -8.615850e-47 |
| Msa0967780 | Msa1075320 | 0.803892 | 2.806297e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075320 | MtrunA17_Chr7g0258911 | 98.636 | 220 | 3 | 0 | 1 | 220 | 1 | 220 | 8.50e-163 | 452 |
| Msa1075320 | MtrunA17_Chr4g0072611 | 93.162 | 234 | 15 | 1 | 1 | 233 | 1 | 234 | 1.05e-161 | 449 |
| Msa1075320 | MtrunA17_Chr4g0072671 | 93.171 | 205 | 14 | 0 | 21 | 225 | 23 | 227 | 6.49e-142 | 399 |
| Msa1075320 | MtrunA17_Chr4g0072601 | 75.330 | 227 | 51 | 1 | 4 | 225 | 3 | 229 | 5.18e-130 | 369 |
| Msa1075320 | MtrunA17_Chr2g0299061 | 72.510 | 251 | 68 | 1 | 8 | 258 | 10 | 259 | 3.06e-128 | 365 |
| Msa1075320 | MtrunA17_Chr4g0071341 | 82.439 | 205 | 36 | 0 | 16 | 220 | 17 | 221 | 1.01e-126 | 361 |
| Msa1075320 | MtrunA17_Chr3g0122021 | 80.769 | 208 | 40 | 0 | 10 | 217 | 14 | 221 | 4.43e-125 | 357 |
| Msa1075320 | MtrunA17_Chr3g0122031 | 80.769 | 208 | 40 | 0 | 10 | 217 | 14 | 221 | 4.89e-125 | 356 |
| Msa1075320 | MtrunA17_Chr8g0377841 | 77.674 | 215 | 48 | 0 | 3 | 217 | 10 | 224 | 5.58e-125 | 356 |
| Msa1075320 | MtrunA17_Chr8g0389641 | 77.249 | 189 | 43 | 0 | 10 | 198 | 15 | 203 | 2.90e-109 | 315 |
| Msa1075320 | MtrunA17_Chr4g0072681 | 80.447 | 179 | 32 | 1 | 45 | 220 | 1 | 179 | 1.19e-105 | 306 |
| Msa1075320 | MtrunA17_Chr5g0443391 | 60.360 | 222 | 87 | 1 | 8 | 229 | 12 | 232 | 2.34e-95 | 281 |
| Msa1075320 | MtrunA17_Chr6g0486581 | 59.070 | 215 | 85 | 2 | 6 | 220 | 9 | 220 | 3.33e-91 | 271 |
| Msa1075320 | MtrunA17_Chr3g0096651 | 57.143 | 224 | 95 | 1 | 21 | 243 | 27 | 250 | 3.95e-90 | 268 |
| Msa1075320 | MtrunA17_Chr4g0023961 | 54.113 | 231 | 98 | 2 | 7 | 231 | 10 | 238 | 8.26e-89 | 265 |
| Msa1075320 | MtrunA17_Chr6g0461761 | 55.230 | 239 | 99 | 1 | 1 | 231 | 1 | 239 | 3.51e-87 | 261 |
| Msa1075320 | MtrunA17_Chr6g0461731 | 55.411 | 231 | 95 | 1 | 9 | 231 | 32 | 262 | 4.15e-86 | 259 |
| Msa1075320 | MtrunA17_Chr7g0252631 | 58.654 | 208 | 86 | 0 | 24 | 231 | 32 | 239 | 5.11e-86 | 258 |
| Msa1075320 | MtrunA17_Chr7g0252621 | 56.881 | 218 | 90 | 1 | 14 | 231 | 26 | 239 | 6.15e-86 | 258 |
| Msa1075320 | MtrunA17_Chr7g0252601 | 53.138 | 239 | 104 | 1 | 1 | 231 | 1 | 239 | 6.71e-86 | 258 |
| Msa1075320 | MtrunA17_Chr4g0054451 | 51.754 | 228 | 107 | 3 | 6 | 231 | 15 | 241 | 1.79e-85 | 256 |
| Msa1075320 | MtrunA17_Chr2g0323161 | 51.528 | 229 | 109 | 1 | 16 | 244 | 17 | 243 | 5.74e-85 | 255 |
| Msa1075320 | MtrunA17_Chr4g0054431 | 52.444 | 225 | 104 | 3 | 8 | 231 | 17 | 239 | 9.38e-85 | 254 |
| Msa1075320 | MtrunA17_Chr1g0206681 | 50.655 | 229 | 113 | 0 | 3 | 231 | 13 | 241 | 4.37e-82 | 248 |
| Msa1075320 | MtrunA17_Chr1g0206081 | 47.656 | 256 | 123 | 2 | 2 | 246 | 5 | 260 | 6.94e-79 | 240 |
| Msa1075320 | MtrunA17_Chr8g0390201 | 61.379 | 145 | 54 | 1 | 89 | 231 | 15 | 159 | 1.01e-62 | 196 |
| Msa1075320 | MtrunA17_Chr8g0340001 | 51.445 | 173 | 83 | 1 | 48 | 220 | 1 | 172 | 6.32e-59 | 187 |
| Msa1075320 | MtrunA17_Chr2g0303861 | 42.017 | 238 | 127 | 7 | 1 | 231 | 1 | 234 | 2.43e-56 | 182 |
| Msa1075320 | MtrunA17_Chr7g0264731 | 43.269 | 208 | 105 | 4 | 23 | 222 | 36 | 238 | 1.10e-53 | 175 |
| Msa1075320 | MtrunA17_Chr4g0028221 | 43.318 | 217 | 109 | 5 | 23 | 231 | 49 | 259 | 2.79e-53 | 174 |
| Msa1075320 | MtrunA17_Chr7g0235541 | 48.980 | 196 | 86 | 7 | 71 | 258 | 1 | 190 | 4.82e-52 | 168 |
| Msa1075320 | MtrunA17_Chr2g0303721 | 40.586 | 239 | 122 | 7 | 1 | 231 | 1 | 227 | 9.74e-52 | 170 |
| Msa1075320 | MtrunA17_Chr1g0180451 | 41.827 | 208 | 108 | 4 | 23 | 222 | 39 | 241 | 2.91e-51 | 169 |
| Msa1075320 | MtrunA17_Chr2g0327411 | 43.256 | 215 | 108 | 6 | 23 | 229 | 53 | 261 | 1.37e-50 | 167 |
| Msa1075320 | MtrunA17_Chr8g0375981 | 39.149 | 235 | 128 | 6 | 1 | 222 | 1 | 233 | 7.40e-49 | 164 |
| Msa1075320 | MtrunA17_Chr1g0161951 | 42.308 | 208 | 110 | 5 | 32 | 231 | 41 | 246 | 6.54e-48 | 161 |
| Msa1075320 | MtrunA17_Chr8g0365231 | 38.679 | 212 | 122 | 4 | 28 | 232 | 50 | 260 | 1.13e-44 | 152 |
| Msa1075320 | MtrunA17_Chr5g0410621 | 38.776 | 196 | 114 | 3 | 32 | 222 | 50 | 244 | 2.31e-43 | 150 |
| Msa1075320 | MtrunA17_Chr8g0382041 | 39.130 | 207 | 111 | 6 | 24 | 220 | 34 | 235 | 9.38e-41 | 143 |
| Msa1075320 | MtrunA17_Chr4g0072641 | 71.875 | 96 | 22 | 2 | 154 | 246 | 37 | 130 | 2.21e-40 | 136 |
| Msa1075320 | MtrunA17_Chr4g0072631 | 66.667 | 78 | 19 | 2 | 1 | 71 | 1 | 78 | 9.50e-29 | 105 |
| Msa1075320 | MtrunA17_Chr8g0390181 | 50.000 | 84 | 40 | 1 | 8 | 91 | 12 | 93 | 3.83e-18 | 77.4 |
| Msa1075320 | MtrunA17_Chr8g0350711 | 32.759 | 174 | 109 | 4 | 46 | 217 | 54 | 221 | 3.29e-15 | 72.8 |
| Msa1075320 | MtrunA17_Chr8g0374231 | 46.269 | 67 | 36 | 0 | 180 | 246 | 1 | 67 | 6.03e-15 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075320 | AT4G25810.1 | 73.387 | 248 | 62 | 2 | 3 | 249 | 4 | 248 | 8.66e-133 | 377 |
| Msa1075320 | AT5G57550.1 | 71.489 | 235 | 59 | 1 | 5 | 231 | 3 | 237 | 2.62e-128 | 365 |
| Msa1075320 | AT5G57560.1 | 74.336 | 226 | 56 | 1 | 6 | 229 | 3 | 228 | 4.25e-126 | 360 |
| Msa1075320 | AT4G30270.1 | 67.206 | 247 | 80 | 1 | 1 | 246 | 1 | 247 | 3.48e-122 | 349 |
| Msa1075320 | AT3G23730.1 | 71.053 | 228 | 65 | 1 | 3 | 229 | 5 | 232 | 2.32e-121 | 348 |
| Msa1075320 | AT4G14130.1 | 74.074 | 216 | 56 | 0 | 10 | 225 | 14 | 229 | 1.31e-119 | 343 |
| Msa1075320 | AT5G48070.1 | 63.306 | 248 | 79 | 3 | 5 | 249 | 8 | 246 | 4.27e-117 | 337 |
| Msa1075320 | AT2G18800.1 | 69.778 | 225 | 65 | 2 | 9 | 230 | 13 | 237 | 1.20e-116 | 336 |
| Msa1075320 | AT4G25820.1 | 78.607 | 201 | 43 | 0 | 16 | 216 | 22 | 222 | 1.26e-115 | 333 |
| Msa1075320 | AT5G57530.1 | 75.248 | 202 | 50 | 0 | 19 | 220 | 22 | 223 | 1.60e-115 | 333 |
| Msa1075320 | AT5G57540.1 | 68.103 | 232 | 63 | 2 | 21 | 249 | 23 | 246 | 1.63e-115 | 333 |
| Msa1075320 | AT4G30280.1 | 64.912 | 228 | 77 | 2 | 7 | 231 | 10 | 237 | 1.79e-103 | 302 |
| Msa1075320 | AT4G30290.1 | 64.912 | 228 | 77 | 2 | 7 | 231 | 5 | 232 | 3.79e-103 | 301 |
| Msa1075320 | AT1G65310.2 | 68.396 | 212 | 66 | 1 | 21 | 231 | 48 | 259 | 4.03e-103 | 302 |
| Msa1075320 | AT1G65310.1 | 68.396 | 212 | 66 | 1 | 21 | 231 | 26 | 237 | 6.87e-103 | 301 |
| Msa1075320 | AT5G13870.2 | 54.978 | 231 | 100 | 1 | 1 | 231 | 13 | 239 | 1.73e-86 | 259 |
| Msa1075320 | AT5G13870.1 | 54.978 | 231 | 100 | 1 | 1 | 231 | 13 | 239 | 1.73e-86 | 259 |
| Msa1075320 | AT5G13870.3 | 54.978 | 231 | 100 | 1 | 1 | 231 | 13 | 239 | 1.73e-86 | 259 |
| Msa1075320 | AT4G03210.1 | 50.628 | 239 | 110 | 2 | 6 | 244 | 11 | 241 | 2.04e-86 | 259 |
| Msa1075320 | AT2G06850.1 | 54.310 | 232 | 100 | 1 | 6 | 231 | 11 | 242 | 2.50e-84 | 254 |
| Msa1075320 | AT5G65730.1 | 50.442 | 226 | 111 | 1 | 9 | 233 | 20 | 245 | 5.62e-84 | 253 |
| Msa1075320 | AT4G28850.1 | 54.378 | 217 | 91 | 2 | 10 | 220 | 9 | 223 | 2.91e-83 | 251 |
| Msa1075320 | AT4G37800.1 | 52.778 | 216 | 100 | 2 | 17 | 231 | 27 | 241 | 7.61e-82 | 248 |
| Msa1075320 | AT2G14620.1 | 49.565 | 230 | 116 | 0 | 1 | 230 | 14 | 243 | 6.66e-81 | 245 |
| Msa1075320 | AT4G03210.2 | 56.281 | 199 | 78 | 2 | 46 | 244 | 24 | 213 | 7.90e-80 | 241 |
| Msa1075320 | AT2G06850.2 | 62.011 | 179 | 68 | 0 | 53 | 231 | 4 | 182 | 1.24e-78 | 237 |
| Msa1075320 | AT1G11545.1 | 48.790 | 248 | 116 | 4 | 8 | 246 | 20 | 265 | 9.72e-78 | 238 |
| Msa1075320 | AT4G13090.1 | 48.945 | 237 | 114 | 3 | 2 | 232 | 7 | 242 | 1.19e-73 | 226 |
| Msa1075320 | AT4G13080.1 | 46.218 | 238 | 120 | 3 | 1 | 232 | 10 | 245 | 1.09e-71 | 222 |
| Msa1075320 | AT3G25050.1 | 49.296 | 213 | 102 | 3 | 24 | 233 | 35 | 244 | 1.96e-71 | 221 |
| Msa1075320 | AT2G14620.2 | 54.545 | 176 | 80 | 0 | 55 | 230 | 18 | 193 | 1.72e-67 | 209 |
| Msa1075320 | AT2G14620.3 | 55.689 | 167 | 74 | 0 | 64 | 230 | 16 | 182 | 1.35e-65 | 204 |
| Msa1075320 | AT2G36870.1 | 44.286 | 210 | 104 | 4 | 23 | 224 | 42 | 246 | 7.96e-54 | 176 |
| Msa1075320 | AT3G44990.1 | 45.894 | 207 | 99 | 5 | 24 | 222 | 39 | 240 | 3.82e-53 | 174 |
| Msa1075320 | AT1G10550.1 | 40.299 | 201 | 114 | 3 | 35 | 230 | 52 | 251 | 3.47e-47 | 159 |
| Msa1075320 | AT1G32170.1 | 36.017 | 236 | 135 | 5 | 1 | 222 | 1 | 234 | 4.92e-46 | 157 |
| Msa1075320 | AT1G14720.1 | 40.291 | 206 | 115 | 4 | 23 | 222 | 30 | 233 | 9.79e-46 | 156 |
| Msa1075320 | AT2G01850.1 | 38.350 | 206 | 119 | 4 | 23 | 222 | 30 | 233 | 2.58e-44 | 152 |
| Msa1075320 | AT4G18990.1 | 38.462 | 208 | 112 | 5 | 30 | 223 | 38 | 243 | 1.73e-42 | 148 |
| Msa1075320 | AT3G48580.1 | 37.799 | 209 | 112 | 7 | 23 | 230 | 37 | 228 | 1.92e-37 | 133 |
| Msa1075320 | AT4G18990.2 | 43.411 | 129 | 70 | 2 | 97 | 223 | 42 | 169 | 5.87e-35 | 127 |
| Msa1075320 | AT2G36870.2 | 45.324 | 139 | 66 | 3 | 23 | 153 | 42 | 178 | 2.08e-32 | 117 |
| Msa1075320 | AT3G48580.3 | 36.517 | 178 | 100 | 5 | 54 | 230 | 4 | 169 | 6.38e-31 | 114 |
| Msa1075320 | AT3G48580.2 | 31.579 | 209 | 105 | 8 | 23 | 230 | 37 | 208 | 1.33e-20 | 88.6 |
Find 74 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGATGGATTGTGATATTT+TGG | 0.218711 | 7_2:+73496638 | None:intergenic |
| ATTTGATGTGCTTACATAAT+AGG | 0.234785 | 7_2:+73496322 | None:intergenic |
| AAGAATGGCAAGGTATTTAT+AGG | 0.244990 | 7_2:+73496661 | None:intergenic |
| GAAATTGACTTTGAATTCTT+AGG | 0.253040 | 7_2:-73496156 | Msa1075320:CDS |
| TGAGAATCTATTCTAGTCTT+TGG | 0.265403 | 7_2:-73495815 | Msa1075320:CDS |
| ATGTTCTTGAATTCTCTAAT+TGG | 0.274937 | 7_2:+73495876 | None:intergenic |
| AATGCATGCACTGTGTCTTC+TGG | 0.314712 | 7_2:-73495702 | Msa1075320:CDS |
| GTCTTTGGAATGCTGATGAT+TGG | 0.342081 | 7_2:-73495800 | Msa1075320:CDS |
| GAAATAATTTACCATAGAAA+TGG | 0.363559 | 7_2:+73495407 | None:intergenic |
| TTCACACCTATTCCATCCTC+TGG | 0.371800 | 7_2:-73496029 | Msa1075320:CDS |
| AGAATGGCAAGGTATTTATA+GGG | 0.386663 | 7_2:+73496662 | None:intergenic |
| AAAATGCCATTGGAAGCTAA+TGG | 0.394542 | 7_2:+73496591 | None:intergenic |
| ATTAGCATTGAAGTTTCTAT+AGG | 0.401233 | 7_2:+73495722 | None:intergenic |
| CTATAAAGAATCCATTTCTA+TGG | 0.407346 | 7_2:-73495418 | Msa1075320:three_prime_UTR |
| ACATTGGTATGAAGAATGTA+TGG | 0.415981 | 7_2:+73496117 | None:intergenic |
| TGCTTGGTTCTCAGAGGAGT+TGG | 0.433098 | 7_2:-73495644 | Msa1075320:CDS |
| AAGGCCCTGAGGAAATCTTT+TGG | 0.436526 | 7_2:+73495552 | None:intergenic |
| AGACTAGAATAGATTCTCAT+TGG | 0.441045 | 7_2:+73495819 | None:intergenic |
| CTTGACAAATCCTCTGGCTC+TGG | 0.442693 | 7_2:-73496431 | Msa1075320:CDS |
| ATGCAGCTTAAACTCGTTCC+TGG | 0.444564 | 7_2:-73496368 | Msa1075320:CDS |
| CTCGTTCCTGGCAACTCTGC+TGG | 0.457205 | 7_2:-73496356 | Msa1075320:CDS |
| TTGTCTCTTGACAAATCCTC+TGG | 0.457727 | 7_2:-73496437 | Msa1075320:CDS |
| TAGAATAGATTCTCATTGGT+TGG | 0.468992 | 7_2:+73495823 | None:intergenic |
| TCTTTGGAATGCTGATGATT+GGG | 0.473720 | 7_2:-73495799 | Msa1075320:CDS |
| GTGAGAAAGTGAGATGTTGA+TGG | 0.477554 | 7_2:+73496623 | None:intergenic |
| ACAGTTGCAATTGCCTCTGC+TGG | 0.489680 | 7_2:-73496536 | Msa1075320:CDS |
| TGATACCAAAAGATTTCCTC+AGG | 0.490646 | 7_2:-73495557 | Msa1075320:three_prime_UTR |
| TTCAAGAACATGGAATCAAA+TGG | 0.495147 | 7_2:-73495864 | Msa1075320:CDS |
| TGGGTTCCAGAGGATGGAAT+AGG | 0.498523 | 7_2:+73496023 | None:intergenic |
| GAGAGCAACAATTCTACCTA+TGG | 0.502278 | 7_2:-73496071 | Msa1075320:CDS |
| CTTAACAAGTCCACCTCTTG+TGG | 0.502433 | 7_2:+73495776 | None:intergenic |
| GTACTTACACAATGCGTTGT+GGG | 0.502506 | 7_2:+73496004 | None:intergenic |
| TTAATTCAGCTATCATCAAA+AGG | 0.502910 | 7_2:-73496192 | Msa1075320:intron |
| ACACATCTAATAAGAATGCT+TGG | 0.503201 | 7_2:-73495660 | Msa1075320:CDS |
| GTGGACTTGTTAAGACAGAT+TGG | 0.508499 | 7_2:-73495767 | Msa1075320:CDS |
| GCAACTCTTGAAAATGCCAT+TGG | 0.521914 | 7_2:+73496581 | None:intergenic |
| ATCAAGACTTTGATATAACA+TGG | 0.525397 | 7_2:-73496505 | Msa1075320:CDS |
| GGAAGCAGTGAAAGGAGCAT+TGG | 0.527846 | 7_2:+73495743 | None:intergenic |
| ACAGTGCCAGCAGAGTTGCC+AGG | 0.543526 | 7_2:+73496350 | None:intergenic |
| GCGTTGTGGGTTCCAGAGGA+TGG | 0.545929 | 7_2:+73496017 | None:intergenic |
| CTGCAGTTGGGTCAAACCAT+AGG | 0.546848 | 7_2:+73496055 | None:intergenic |
| CAAGAGACAAAGTAAGAAGT+TGG | 0.551315 | 7_2:+73496450 | None:intergenic |
| AATGTGTTTAGCCAAGGAAA+AGG | 0.552403 | 7_2:-73496099 | Msa1075320:CDS |
| TAGGTGTGAAAATCTGCAGT+TGG | 0.552711 | 7_2:+73496042 | None:intergenic |
| AGGGCCTTCCTCAAGAATGC+AGG | 0.553967 | 7_2:-73495537 | Msa1075320:three_prime_UTR |
| CTGTAGAGATCAAAATGACT+AGG | 0.554171 | 7_2:+73496555 | None:intergenic |
| AAATACAATACGAAGGGTTG+AGG | 0.556496 | 7_2:+73495483 | None:intergenic |
| CATACCAATGTGTTTAGCCA+AGG | 0.557351 | 7_2:-73496105 | Msa1075320:CDS |
| AGGTGTGAAAATCTGCAGTT+GGG | 0.562198 | 7_2:+73496043 | None:intergenic |
| TTTCTATAGGAAGCAGTGAA+AGG | 0.568107 | 7_2:+73495735 | None:intergenic |
| ATCATCAAAAGGAGGTGCAT+GGG | 0.570048 | 7_2:-73496181 | Msa1075320:CDS |
| TCAAGACTTTGATATAACAT+GGG | 0.571188 | 7_2:-73496504 | Msa1075320:CDS |
| TTTGATATAACATGGGGAGA+TGG | 0.574885 | 7_2:-73496497 | Msa1075320:CDS |
| CAAGTCATGAGAGGCTCAAG+TGG | 0.575997 | 7_2:-73495615 | Msa1075320:CDS |
| TAAACCATCCTGCATTCTTG+AGG | 0.578265 | 7_2:+73495529 | None:intergenic |
| TATCATCAAAAGGAGGTGCA+TGG | 0.582020 | 7_2:-73496182 | Msa1075320:CDS |
| CAATGCGTTGTGGGTTCCAG+AGG | 0.582602 | 7_2:+73496013 | None:intergenic |
| AGTACTTACACAATGCGTTG+TGG | 0.583264 | 7_2:+73496003 | None:intergenic |
| AATTAGAGAATTCAAGAACA+TGG | 0.587989 | 7_2:-73495874 | Msa1075320:CDS |
| GATGATTGGGCCACAAGAGG+TGG | 0.592351 | 7_2:-73495786 | Msa1075320:CDS |
| CCATCCTGCATTCTTGAGGA+AGG | 0.601607 | 7_2:+73495533 | None:intergenic |
| CATTGGTATGAAGAATGTAT+GGG | 0.604051 | 7_2:+73496118 | None:intergenic |
| GGATTGAAAGCCAGAGCCAG+AGG | 0.618299 | 7_2:+73496421 | None:intergenic |
| CAAGACTTTGATATAACATG+GGG | 0.627432 | 7_2:-73496503 | Msa1075320:CDS |
| GAATTCTTAGGAAACTTGAG+TGG | 0.632192 | 7_2:-73496144 | Msa1075320:CDS |
| GCTGATGATTGGGCCACAAG+AGG | 0.655452 | 7_2:-73495789 | Msa1075320:CDS |
| CATTCTTGAGGAAGGCCCTG+AGG | 0.663273 | 7_2:+73495541 | None:intergenic |
| TAAGAATGCTTGGTTCTCAG+AGG | 0.671213 | 7_2:-73495650 | Msa1075320:CDS |
| CGTGCTAAAATACTCAACAA+TGG | 0.672548 | 7_2:-73496473 | Msa1075320:CDS |
| AAGTCATGAGAGGCTCAAGT+GGG | 0.675575 | 7_2:-73495614 | Msa1075320:CDS |
| TGGATTCTACAAGTCATGAG+AGG | 0.679866 | 7_2:-73495624 | Msa1075320:CDS |
| CCTTCCTCAAGAATGCAGGA+TGG | 0.683725 | 7_2:-73495533 | Msa1075320:three_prime_UTR |
| ATTCAGCTATCATCAAAAGG+AGG | 0.688497 | 7_2:-73496189 | Msa1075320:intron |
| GATACCAAAAGATTTCCTCA+GGG | 0.691000 | 7_2:-73495556 | Msa1075320:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAACTATACATTTTGTTTA+AGG | - | chr7_2:73495787-73495806 | Msa1075320:CDS | 15.0% |
| !!! | TTTTTTTTAATTACTTGTGT+CGG | - | chr7_2:73496108-73496127 | Msa1075320:CDS | 15.0% |
| !!! | ATAACTATACATTTTGTTTA+AGG | - | chr7_2:73495787-73495806 | Msa1075320:CDS | 15.0% |
| !!! | TTTTTTTTAATTACTTGTGT+CGG | - | chr7_2:73496108-73496127 | Msa1075320:CDS | 15.0% |
| !!! | TAAAAGTTCTTTTAACTCAT+TGG | - | chr7_2:73495837-73495856 | Msa1075320:CDS | 20.0% |
| !! | TTACAAAAATACAATACGAA+GGG | + | chr7_2:73496593-73496612 | None:intergenic | 20.0% |
| !! | ATTACAAAAATACAATACGA+AGG | + | chr7_2:73496594-73496613 | None:intergenic | 20.0% |
| !!! | TAAAAGTTCTTTTAACTCAT+TGG | - | chr7_2:73495837-73495856 | Msa1075320:CDS | 20.0% |
| !! | TTACAAAAATACAATACGAA+GGG | + | chr7_2:73496593-73496612 | None:intergenic | 20.0% |
| !! | ATTACAAAAATACAATACGA+AGG | + | chr7_2:73496594-73496613 | None:intergenic | 20.0% |
| !!! | ATTGTGATATTTTGGAAGAA+TGG | + | chr7_2:73495424-73495443 | None:intergenic | 25.0% |
| ! | ATCAAGACTTTGATATAACA+TGG | - | chr7_2:73495562-73495581 | Msa1075320:three_prime_UTR | 25.0% |
| ! | TCAAGACTTTGATATAACAT+GGG | - | chr7_2:73495563-73495582 | Msa1075320:three_prime_UTR | 25.0% |
| !! | TCCAAAAATGAATACCTTTT+TGG | - | chr7_2:73495666-73495685 | Msa1075320:CDS | 25.0% |
| ! | ATTTGATGTGCTTACATAAT+AGG | + | chr7_2:73495748-73495767 | None:intergenic | 25.0% |
| ! | TTAATTCAGCTATCATCAAA+AGG | - | chr7_2:73495875-73495894 | Msa1075320:CDS | 25.0% |
| !! | GAAATTGACTTTGAATTCTT+AGG | - | chr7_2:73495911-73495930 | Msa1075320:intron | 25.0% |
| !!! | TTTATTTTTCAGTTTCTCTG+TGG | - | chr7_2:73496160-73496179 | Msa1075320:CDS | 25.0% |
| ! | ATGTTCTTGAATTCTCTAAT+TGG | + | chr7_2:73496194-73496213 | None:intergenic | 25.0% |
| ! | AATTAGAGAATTCAAGAACA+TGG | - | chr7_2:73496193-73496212 | Msa1075320:intron | 25.0% |
| !! | ATTAGCATTGAAGTTTCTAT+AGG | + | chr7_2:73496348-73496367 | None:intergenic | 25.0% |
| ! | CTATAAAGAATCCATTTCTA+TGG | - | chr7_2:73496649-73496668 | Msa1075320:five_prime_UTR | 25.0% |
| !!! | ATTGTGATATTTTGGAAGAA+TGG | + | chr7_2:73495424-73495443 | None:intergenic | 25.0% |
| ! | ATCAAGACTTTGATATAACA+TGG | - | chr7_2:73495562-73495581 | Msa1075320:three_prime_UTR | 25.0% |
| ! | TCAAGACTTTGATATAACAT+GGG | - | chr7_2:73495563-73495582 | Msa1075320:three_prime_UTR | 25.0% |
| !! | TCCAAAAATGAATACCTTTT+TGG | - | chr7_2:73495666-73495685 | Msa1075320:CDS | 25.0% |
| ! | ATTTGATGTGCTTACATAAT+AGG | + | chr7_2:73495748-73495767 | None:intergenic | 25.0% |
| ! | TTAATTCAGCTATCATCAAA+AGG | - | chr7_2:73495875-73495894 | Msa1075320:CDS | 25.0% |
| !! | GAAATTGACTTTGAATTCTT+AGG | - | chr7_2:73495911-73495930 | Msa1075320:intron | 25.0% |
| !!! | TTTATTTTTCAGTTTCTCTG+TGG | - | chr7_2:73496160-73496179 | Msa1075320:CDS | 25.0% |
| ! | ATGTTCTTGAATTCTCTAAT+TGG | + | chr7_2:73496194-73496213 | None:intergenic | 25.0% |
| ! | AATTAGAGAATTCAAGAACA+TGG | - | chr7_2:73496193-73496212 | Msa1075320:intron | 25.0% |
| !! | ATTAGCATTGAAGTTTCTAT+AGG | + | chr7_2:73496348-73496367 | None:intergenic | 25.0% |
| ! | CTATAAAGAATCCATTTCTA+TGG | - | chr7_2:73496649-73496668 | Msa1075320:five_prime_UTR | 25.0% |
| !!! | GTTGATGGATTGTGATATTT+TGG | + | chr7_2:73495432-73495451 | None:intergenic | 30.0% |
| ! | AAAAATCCATTAGCTTCCAA+TGG | - | chr7_2:73495470-73495489 | Msa1075320:three_prime_UTR | 30.0% |
| CAAGACTTTGATATAACATG+GGG | - | chr7_2:73495564-73495583 | Msa1075320:three_prime_UTR | 30.0% | |
| !!! | GCCAAAAAGGTATTCATTTT+TGG | + | chr7_2:73495670-73495689 | None:intergenic | 30.0% |
| ! | GCATATCAATTTTGCCAAAA+AGG | + | chr7_2:73495683-73495702 | None:intergenic | 30.0% |
| CATTGGTATGAAGAATGTAT+GGG | + | chr7_2:73495952-73495971 | None:intergenic | 30.0% | |
| ACATTGGTATGAAGAATGTA+TGG | + | chr7_2:73495953-73495972 | None:intergenic | 30.0% | |
| TTCAAGAACATGGAATCAAA+TGG | - | chr7_2:73496203-73496222 | Msa1075320:intron | 30.0% | |
| !!! | ATTCTCATTGGTTGGTTTTT+GGG | + | chr7_2:73496239-73496258 | None:intergenic | 30.0% |
| TAGAATAGATTCTCATTGGT+TGG | + | chr7_2:73496247-73496266 | None:intergenic | 30.0% | |
| AGACTAGAATAGATTCTCAT+TGG | + | chr7_2:73496251-73496270 | None:intergenic | 30.0% | |
| ! | TGAGAATCTATTCTAGTCTT+TGG | - | chr7_2:73496252-73496271 | Msa1075320:intron | 30.0% |
| ACACATCTAATAAGAATGCT+TGG | - | chr7_2:73496407-73496426 | Msa1075320:CDS | 30.0% | |
| !!! | GTTGATGGATTGTGATATTT+TGG | + | chr7_2:73495432-73495451 | None:intergenic | 30.0% |
| ! | AAAAATCCATTAGCTTCCAA+TGG | - | chr7_2:73495470-73495489 | Msa1075320:three_prime_UTR | 30.0% |
| CAAGACTTTGATATAACATG+GGG | - | chr7_2:73495564-73495583 | Msa1075320:three_prime_UTR | 30.0% | |
| !!! | GCCAAAAAGGTATTCATTTT+TGG | + | chr7_2:73495670-73495689 | None:intergenic | 30.0% |
| ! | GCATATCAATTTTGCCAAAA+AGG | + | chr7_2:73495683-73495702 | None:intergenic | 30.0% |
| CATTGGTATGAAGAATGTAT+GGG | + | chr7_2:73495952-73495971 | None:intergenic | 30.0% | |
| ACATTGGTATGAAGAATGTA+TGG | + | chr7_2:73495953-73495972 | None:intergenic | 30.0% | |
| TTCAAGAACATGGAATCAAA+TGG | - | chr7_2:73496203-73496222 | Msa1075320:intron | 30.0% | |
| !!! | ATTCTCATTGGTTGGTTTTT+GGG | + | chr7_2:73496239-73496258 | None:intergenic | 30.0% |
| TAGAATAGATTCTCATTGGT+TGG | + | chr7_2:73496247-73496266 | None:intergenic | 30.0% | |
| AGACTAGAATAGATTCTCAT+TGG | + | chr7_2:73496251-73496270 | None:intergenic | 30.0% | |
| ! | TGAGAATCTATTCTAGTCTT+TGG | - | chr7_2:73496252-73496271 | Msa1075320:intron | 30.0% |
| ACACATCTAATAAGAATGCT+TGG | - | chr7_2:73496407-73496426 | Msa1075320:CDS | 30.0% | |
| !! | GATATTTTGGAAGAATGGCA+AGG | + | chr7_2:73495419-73495438 | None:intergenic | 35.0% |
| AAAATGCCATTGGAAGCTAA+TGG | + | chr7_2:73495479-73495498 | None:intergenic | 35.0% | |
| CTGTAGAGATCAAAATGACT+AGG | + | chr7_2:73495515-73495534 | None:intergenic | 35.0% | |
| TTGATAAAAATTGCCAGCAG+AGG | + | chr7_2:73495547-73495566 | None:intergenic | 35.0% | |
| TTTGATATAACATGGGGAGA+TGG | - | chr7_2:73495570-73495589 | Msa1075320:three_prime_UTR | 35.0% | |
| CGTGCTAAAATACTCAACAA+TGG | - | chr7_2:73495594-73495613 | Msa1075320:exon | 35.0% | |
| CAAGAGACAAAGTAAGAAGT+TGG | + | chr7_2:73495620-73495639 | None:intergenic | 35.0% | |
| ATTCAGCTATCATCAAAAGG+AGG | - | chr7_2:73495878-73495897 | Msa1075320:CDS | 35.0% | |
| GAATTCTTAGGAAACTTGAG+TGG | - | chr7_2:73495923-73495942 | Msa1075320:intron | 35.0% | |
| ! | TTTTCCTTGGCTAAACACAT+TGG | + | chr7_2:73495969-73495988 | None:intergenic | 35.0% |
| AATGTGTTTAGCCAAGGAAA+AGG | - | chr7_2:73495968-73495987 | Msa1075320:intron | 35.0% | |
| !! | TTTTTCAGTTTCTCTGTGGA+TGG | - | chr7_2:73496164-73496183 | Msa1075320:CDS | 35.0% |
| !!! | ATTGGTTGGTTTTTGGGAAA+TGG | + | chr7_2:73496233-73496252 | None:intergenic | 35.0% |
| !!! | GATTCTCATTGGTTGGTTTT+TGG | + | chr7_2:73496240-73496259 | None:intergenic | 35.0% |
| !! | TCTTTGGAATGCTGATGATT+GGG | - | chr7_2:73496268-73496287 | Msa1075320:intron | 35.0% |
| TTTCTATAGGAAGCAGTGAA+AGG | + | chr7_2:73496335-73496354 | None:intergenic | 35.0% | |
| TGATACCAAAAGATTTCCTC+AGG | - | chr7_2:73496510-73496529 | Msa1075320:CDS | 35.0% | |
| GATACCAAAAGATTTCCTCA+GGG | - | chr7_2:73496511-73496530 | Msa1075320:CDS | 35.0% | |
| AAATACAATACGAAGGGTTG+AGG | + | chr7_2:73496587-73496606 | None:intergenic | 35.0% | |
| !! | GATATTTTGGAAGAATGGCA+AGG | + | chr7_2:73495419-73495438 | None:intergenic | 35.0% |
| AAAATGCCATTGGAAGCTAA+TGG | + | chr7_2:73495479-73495498 | None:intergenic | 35.0% | |
| CTGTAGAGATCAAAATGACT+AGG | + | chr7_2:73495515-73495534 | None:intergenic | 35.0% | |
| TTGATAAAAATTGCCAGCAG+AGG | + | chr7_2:73495547-73495566 | None:intergenic | 35.0% | |
| TTTGATATAACATGGGGAGA+TGG | - | chr7_2:73495570-73495589 | Msa1075320:three_prime_UTR | 35.0% | |
| CGTGCTAAAATACTCAACAA+TGG | - | chr7_2:73495594-73495613 | Msa1075320:exon | 35.0% | |
| CAAGAGACAAAGTAAGAAGT+TGG | + | chr7_2:73495620-73495639 | None:intergenic | 35.0% | |
| ATTCAGCTATCATCAAAAGG+AGG | - | chr7_2:73495878-73495897 | Msa1075320:CDS | 35.0% | |
| GAATTCTTAGGAAACTTGAG+TGG | - | chr7_2:73495923-73495942 | Msa1075320:intron | 35.0% | |
| ! | TTTTCCTTGGCTAAACACAT+TGG | + | chr7_2:73495969-73495988 | None:intergenic | 35.0% |
| AATGTGTTTAGCCAAGGAAA+AGG | - | chr7_2:73495968-73495987 | Msa1075320:intron | 35.0% | |
| !! | TTTTTCAGTTTCTCTGTGGA+TGG | - | chr7_2:73496164-73496183 | Msa1075320:CDS | 35.0% |
| !!! | ATTGGTTGGTTTTTGGGAAA+TGG | + | chr7_2:73496233-73496252 | None:intergenic | 35.0% |
| !!! | GATTCTCATTGGTTGGTTTT+TGG | + | chr7_2:73496240-73496259 | None:intergenic | 35.0% |
| !! | TCTTTGGAATGCTGATGATT+GGG | - | chr7_2:73496268-73496287 | Msa1075320:intron | 35.0% |
| TTTCTATAGGAAGCAGTGAA+AGG | + | chr7_2:73496335-73496354 | None:intergenic | 35.0% | |
| TGATACCAAAAGATTTCCTC+AGG | - | chr7_2:73496510-73496529 | Msa1075320:CDS | 35.0% | |
| GATACCAAAAGATTTCCTCA+GGG | - | chr7_2:73496511-73496530 | Msa1075320:CDS | 35.0% | |
| AAATACAATACGAAGGGTTG+AGG | + | chr7_2:73496587-73496606 | None:intergenic | 35.0% | |
| GTGAGAAAGTGAGATGTTGA+TGG | + | chr7_2:73495447-73495466 | None:intergenic | 40.0% | |
| GCAACTCTTGAAAATGCCAT+TGG | + | chr7_2:73495489-73495508 | None:intergenic | 40.0% | |
| TTGTCTCTTGACAAATCCTC+TGG | - | chr7_2:73495630-73495649 | Msa1075320:CDS | 40.0% | |
| ! | TATCATCAAAAGGAGGTGCA+TGG | - | chr7_2:73495885-73495904 | Msa1075320:CDS | 40.0% |
| ! | ATCATCAAAAGGAGGTGCAT+GGG | - | chr7_2:73495886-73495905 | Msa1075320:CDS | 40.0% |
| CATACCAATGTGTTTAGCCA+AGG | - | chr7_2:73495962-73495981 | Msa1075320:intron | 40.0% | |
| GAGAGCAACAATTCTACCTA+TGG | - | chr7_2:73495996-73496015 | Msa1075320:intron | 40.0% | |
| AGGTGTGAAAATCTGCAGTT+GGG | + | chr7_2:73496027-73496046 | None:intergenic | 40.0% | |
| TAGGTGTGAAAATCTGCAGT+TGG | + | chr7_2:73496028-73496047 | None:intergenic | 40.0% | |
| GTACTTACACAATGCGTTGT+GGG | + | chr7_2:73496066-73496085 | None:intergenic | 40.0% | |
| AGTACTTACACAATGCGTTG+TGG | + | chr7_2:73496067-73496086 | None:intergenic | 40.0% | |
| !! | GTCTTTGGAATGCTGATGAT+TGG | - | chr7_2:73496267-73496286 | Msa1075320:intron | 40.0% |
| !! | GTGGACTTGTTAAGACAGAT+TGG | - | chr7_2:73496300-73496319 | Msa1075320:intron | 40.0% |
| ! | TAAGAATGCTTGGTTCTCAG+AGG | - | chr7_2:73496417-73496436 | Msa1075320:CDS | 40.0% |
| TGGATTCTACAAGTCATGAG+AGG | - | chr7_2:73496443-73496462 | Msa1075320:CDS | 40.0% | |
| TAAACCATCCTGCATTCTTG+AGG | + | chr7_2:73496541-73496560 | None:intergenic | 40.0% | |
| GTGAGAAAGTGAGATGTTGA+TGG | + | chr7_2:73495447-73495466 | None:intergenic | 40.0% | |
| GCAACTCTTGAAAATGCCAT+TGG | + | chr7_2:73495489-73495508 | None:intergenic | 40.0% | |
| TTGTCTCTTGACAAATCCTC+TGG | - | chr7_2:73495630-73495649 | Msa1075320:CDS | 40.0% | |
| ! | TATCATCAAAAGGAGGTGCA+TGG | - | chr7_2:73495885-73495904 | Msa1075320:CDS | 40.0% |
| ! | ATCATCAAAAGGAGGTGCAT+GGG | - | chr7_2:73495886-73495905 | Msa1075320:CDS | 40.0% |
| CATACCAATGTGTTTAGCCA+AGG | - | chr7_2:73495962-73495981 | Msa1075320:intron | 40.0% | |
| GAGAGCAACAATTCTACCTA+TGG | - | chr7_2:73495996-73496015 | Msa1075320:intron | 40.0% | |
| AGGTGTGAAAATCTGCAGTT+GGG | + | chr7_2:73496027-73496046 | None:intergenic | 40.0% | |
| TAGGTGTGAAAATCTGCAGT+TGG | + | chr7_2:73496028-73496047 | None:intergenic | 40.0% | |
| GTACTTACACAATGCGTTGT+GGG | + | chr7_2:73496066-73496085 | None:intergenic | 40.0% | |
| AGTACTTACACAATGCGTTG+TGG | + | chr7_2:73496067-73496086 | None:intergenic | 40.0% | |
| !! | GTCTTTGGAATGCTGATGAT+TGG | - | chr7_2:73496267-73496286 | Msa1075320:intron | 40.0% |
| !! | GTGGACTTGTTAAGACAGAT+TGG | - | chr7_2:73496300-73496319 | Msa1075320:intron | 40.0% |
| ! | TAAGAATGCTTGGTTCTCAG+AGG | - | chr7_2:73496417-73496436 | Msa1075320:CDS | 40.0% |
| TGGATTCTACAAGTCATGAG+AGG | - | chr7_2:73496443-73496462 | Msa1075320:CDS | 40.0% | |
| TAAACCATCCTGCATTCTTG+AGG | + | chr7_2:73496541-73496560 | None:intergenic | 40.0% | |
| ATGCAGCTTAAACTCGTTCC+TGG | - | chr7_2:73495699-73495718 | Msa1075320:CDS | 45.0% | |
| TTCACACCTATTCCATCCTC+TGG | - | chr7_2:73496038-73496057 | Msa1075320:CDS | 45.0% | |
| CTTAACAAGTCCACCTCTTG+TGG | + | chr7_2:73496294-73496313 | None:intergenic | 45.0% | |
| AATGCATGCACTGTGTCTTC+TGG | - | chr7_2:73496365-73496384 | Msa1075320:CDS | 45.0% | |
| AAGTCATGAGAGGCTCAAGT+GGG | - | chr7_2:73496453-73496472 | Msa1075320:CDS | 45.0% | |
| ! | AAGGCCCTGAGGAAATCTTT+TGG | + | chr7_2:73496518-73496537 | None:intergenic | 45.0% |
| ATGCAGCTTAAACTCGTTCC+TGG | - | chr7_2:73495699-73495718 | Msa1075320:CDS | 45.0% | |
| TTCACACCTATTCCATCCTC+TGG | - | chr7_2:73496038-73496057 | Msa1075320:CDS | 45.0% | |
| CTTAACAAGTCCACCTCTTG+TGG | + | chr7_2:73496294-73496313 | None:intergenic | 45.0% | |
| AATGCATGCACTGTGTCTTC+TGG | - | chr7_2:73496365-73496384 | Msa1075320:CDS | 45.0% | |
| AAGTCATGAGAGGCTCAAGT+GGG | - | chr7_2:73496453-73496472 | Msa1075320:CDS | 45.0% | |
| ! | AAGGCCCTGAGGAAATCTTT+TGG | + | chr7_2:73496518-73496537 | None:intergenic | 45.0% |
| !!! | ATTAAAAAAAATCAATTTTA+AGG | + | chr7_2:73496099-73496118 | None:intergenic | 5.0% |
| !!! | ATTAAAAAAAATCAATTTTA+AGG | + | chr7_2:73496099-73496118 | None:intergenic | 5.0% |
| ACAGTTGCAATTGCCTCTGC+TGG | - | chr7_2:73495531-73495550 | Msa1075320:three_prime_UTR | 50.0% | |
| ! | CTTGACAAATCCTCTGGCTC+TGG | - | chr7_2:73495636-73495655 | Msa1075320:CDS | 50.0% |
| ! | GCTCTCTGTTGCCTTTTCCT+TGG | + | chr7_2:73495982-73496001 | None:intergenic | 50.0% |
| CTGCAGTTGGGTCAAACCAT+AGG | + | chr7_2:73496015-73496034 | None:intergenic | 50.0% | |
| TGGGTTCCAGAGGATGGAAT+AGG | + | chr7_2:73496047-73496066 | None:intergenic | 50.0% | |
| ! | GGAAGCAGTGAAAGGAGCAT+TGG | + | chr7_2:73496327-73496346 | None:intergenic | 50.0% |
| ! | TGCTTGGTTCTCAGAGGAGT+TGG | - | chr7_2:73496423-73496442 | Msa1075320:CDS | 50.0% |
| CAAGTCATGAGAGGCTCAAG+TGG | - | chr7_2:73496452-73496471 | Msa1075320:CDS | 50.0% | |
| CCATCCTGCATTCTTGAGGA+AGG | + | chr7_2:73496537-73496556 | None:intergenic | 50.0% | |
| CCTTCCTCAAGAATGCAGGA+TGG | - | chr7_2:73496534-73496553 | Msa1075320:CDS | 50.0% | |
| ACAGTTGCAATTGCCTCTGC+TGG | - | chr7_2:73495531-73495550 | Msa1075320:three_prime_UTR | 50.0% | |
| ! | CTTGACAAATCCTCTGGCTC+TGG | - | chr7_2:73495636-73495655 | Msa1075320:CDS | 50.0% |
| ! | GCTCTCTGTTGCCTTTTCCT+TGG | + | chr7_2:73495982-73496001 | None:intergenic | 50.0% |
| CTGCAGTTGGGTCAAACCAT+AGG | + | chr7_2:73496015-73496034 | None:intergenic | 50.0% | |
| TGGGTTCCAGAGGATGGAAT+AGG | + | chr7_2:73496047-73496066 | None:intergenic | 50.0% | |
| ! | GGAAGCAGTGAAAGGAGCAT+TGG | + | chr7_2:73496327-73496346 | None:intergenic | 50.0% |
| ! | TGCTTGGTTCTCAGAGGAGT+TGG | - | chr7_2:73496423-73496442 | Msa1075320:CDS | 50.0% |
| CAAGTCATGAGAGGCTCAAG+TGG | - | chr7_2:73496452-73496471 | Msa1075320:CDS | 50.0% | |
| CCATCCTGCATTCTTGAGGA+AGG | + | chr7_2:73496537-73496556 | None:intergenic | 50.0% | |
| CCTTCCTCAAGAATGCAGGA+TGG | - | chr7_2:73496534-73496553 | Msa1075320:CDS | 50.0% | |
| GGATTGAAAGCCAGAGCCAG+AGG | + | chr7_2:73495649-73495668 | None:intergenic | 55.0% | |
| CAATGCGTTGTGGGTTCCAG+AGG | + | chr7_2:73496057-73496076 | None:intergenic | 55.0% | |
| GCTGATGATTGGGCCACAAG+AGG | - | chr7_2:73496278-73496297 | Msa1075320:intron | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | - | chr7_2:73496281-73496300 | Msa1075320:intron | 55.0% | |
| CATTCTTGAGGAAGGCCCTG+AGG | + | chr7_2:73496529-73496548 | None:intergenic | 55.0% | |
| AGGGCCTTCCTCAAGAATGC+AGG | - | chr7_2:73496530-73496549 | Msa1075320:CDS | 55.0% | |
| GGATTGAAAGCCAGAGCCAG+AGG | + | chr7_2:73495649-73495668 | None:intergenic | 55.0% | |
| CAATGCGTTGTGGGTTCCAG+AGG | + | chr7_2:73496057-73496076 | None:intergenic | 55.0% | |
| GCTGATGATTGGGCCACAAG+AGG | - | chr7_2:73496278-73496297 | Msa1075320:intron | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | - | chr7_2:73496281-73496300 | Msa1075320:intron | 55.0% | |
| CATTCTTGAGGAAGGCCCTG+AGG | + | chr7_2:73496529-73496548 | None:intergenic | 55.0% | |
| AGGGCCTTCCTCAAGAATGC+AGG | - | chr7_2:73496530-73496549 | Msa1075320:CDS | 55.0% | |
| CTCGTTCCTGGCAACTCTGC+TGG | - | chr7_2:73495711-73495730 | Msa1075320:CDS | 60.0% | |
| ACAGTGCCAGCAGAGTTGCC+AGG | + | chr7_2:73495720-73495739 | None:intergenic | 60.0% | |
| GCGTTGTGGGTTCCAGAGGA+TGG | + | chr7_2:73496053-73496072 | None:intergenic | 60.0% | |
| CTCGTTCCTGGCAACTCTGC+TGG | - | chr7_2:73495711-73495730 | Msa1075320:CDS | 60.0% | |
| ACAGTGCCAGCAGAGTTGCC+AGG | + | chr7_2:73495720-73495739 | None:intergenic | 60.0% | |
| GCGTTGTGGGTTCCAGAGGA+TGG | + | chr7_2:73496053-73496072 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 73495408 | 73496681 | 73495408 | ID=Msa1075320;Name=Msa1075320 |
| chr7_2 | mRNA | 73495408 | 73496681 | 73495408 | ID=Msa1075320-mRNA-1;Parent=Msa1075320;Name=Msa1075320-mRNA-1;_AED=0.03;_eAED=0.03;_QI=81|1|1|1|1|1|3|188|259 |
| chr7_2 | exon | 73495408 | 73495917 | 73495408 | ID=Msa1075320-mRNA-1:exon:17124;Parent=Msa1075320-mRNA-1 |
| chr7_2 | exon | 73496012 | 73496205 | 73496012 | ID=Msa1075320-mRNA-1:exon:17123;Parent=Msa1075320-mRNA-1 |
| chr7_2 | exon | 73496337 | 73496681 | 73496337 | ID=Msa1075320-mRNA-1:exon:17122;Parent=Msa1075320-mRNA-1 |
| chr7_2 | five_prime_UTR | 73496601 | 73496681 | 73496601 | ID=Msa1075320-mRNA-1:five_prime_utr;Parent=Msa1075320-mRNA-1 |
| chr7_2 | CDS | 73496337 | 73496600 | 73496337 | ID=Msa1075320-mRNA-1:cds;Parent=Msa1075320-mRNA-1 |
| chr7_2 | CDS | 73496012 | 73496205 | 73496012 | ID=Msa1075320-mRNA-1:cds;Parent=Msa1075320-mRNA-1 |
| chr7_2 | CDS | 73495596 | 73495917 | 73495596 | ID=Msa1075320-mRNA-1:cds;Parent=Msa1075320-mRNA-1 |
| chr7_2 | three_prime_UTR | 73495408 | 73495595 | 73495408 | ID=Msa1075320-mRNA-1:three_prime_utr;Parent=Msa1075320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
