Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267400 | XP_003625289.1 | 98.227 | 282 | 5 | 0 | 1 | 282 | 1 | 282 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267400 | sp|Q38910|XTH23_ARATH | 75.000 | 280 | 67 | 2 | 3 | 279 | 4 | 283 | 1.16e-158 | 446 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267400 | G7KW97 | 98.227 | 282 | 5 | 0 | 1 | 282 | 1 | 282 | 0.0 | 580 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014590 | Msa0267400 | 0.825566 | 4.371037e-54 | -8.615850e-47 |
| Msa0025570 | Msa0267400 | 0.812733 | 3.654067e-51 | -8.615850e-47 |
| Msa0045810 | Msa0267400 | 0.805802 | 1.119550e-49 | -8.615850e-47 |
| Msa0046200 | Msa0267400 | 0.813141 | 2.974082e-51 | -8.615850e-47 |
| Msa0073110 | Msa0267400 | 0.823456 | 1.371870e-53 | -8.615850e-47 |
| Msa0106540 | Msa0267400 | 0.810116 | 1.352393e-50 | -8.615850e-47 |
| Msa0120450 | Msa0267400 | 0.818953 | 1.497612e-52 | -8.615850e-47 |
| Msa0121320 | Msa0267400 | 0.810774 | 9.749991e-51 | -8.615850e-47 |
| Msa0166180 | Msa0267400 | 0.801276 | 9.716642e-49 | -8.615850e-47 |
| Msa0192470 | Msa0267400 | 0.820910 | 5.343277e-53 | -8.615850e-47 |
| Msa0203880 | Msa0267400 | 0.804208 | 2.412083e-49 | -8.615850e-47 |
| Msa0207680 | Msa0267400 | 0.805303 | 1.424511e-49 | -8.615850e-47 |
| Msa0209060 | Msa0267400 | 0.804434 | 2.163943e-49 | -8.615850e-47 |
| Msa0238110 | Msa0267400 | 0.831332 | 1.773056e-55 | -8.615850e-47 |
| Msa0248320 | Msa0267400 | 0.805988 | 1.023031e-49 | -8.615850e-47 |
| Msa0258010 | Msa0267400 | 0.802158 | 6.407293e-49 | -8.615850e-47 |
| Msa0261400 | Msa0267400 | 0.821655 | 3.598332e-53 | -8.615850e-47 |
| Msa0267400 | Msa0269240 | 0.808976 | 2.376424e-50 | -8.615850e-47 |
| Msa0267400 | Msa0272840 | 0.821254 | 4.452963e-53 | -8.615850e-47 |
| Msa0267400 | Msa0285420 | 0.800245 | 1.577810e-48 | -8.615850e-47 |
| Msa0267400 | Msa0288540 | 0.800726 | 1.259196e-48 | -8.615850e-47 |
| Msa0267400 | Msa0299030 | 0.804162 | 2.465708e-49 | -8.615850e-47 |
| Msa0267400 | Msa0324220 | 0.801073 | 1.069513e-48 | -8.615850e-47 |
| Msa0267400 | Msa0333770 | 0.802979 | 4.338323e-49 | -8.615850e-47 |
| Msa0267400 | Msa0362170 | 0.807579 | 4.717206e-50 | -8.615850e-47 |
| Msa0267400 | Msa0374040 | 0.818009 | 2.450625e-52 | -8.615850e-47 |
| Msa0267400 | Msa0417400 | 0.801227 | 9.948044e-49 | -8.615850e-47 |
| Msa0267400 | Msa0502970 | 0.804262 | 2.350654e-49 | -8.615850e-47 |
| Msa0267400 | Msa0515150 | 0.802379 | 5.768441e-49 | -8.615850e-47 |
| Msa0267400 | Msa0530990 | 0.803920 | 2.768725e-49 | -8.615850e-47 |
| Msa0267400 | Msa0559660 | 0.812791 | 3.548188e-51 | -8.615850e-47 |
| Msa0267400 | Msa0565700 | 0.800461 | 1.425444e-48 | -8.615850e-47 |
| Msa0267400 | Msa0567330 | 0.803858 | 2.852189e-49 | -8.615850e-47 |
| Msa0267400 | Msa0576320 | 0.800673 | 1.290697e-48 | -8.615850e-47 |
| Msa0267400 | Msa0581370 | 0.840736 | 7.263536e-58 | -8.615850e-47 |
| Msa0267400 | Msa0587870 | 0.827215 | 1.768821e-54 | -8.615850e-47 |
| Msa0267400 | Msa0591490 | 0.801399 | 9.170999e-49 | -8.615850e-47 |
| Msa0267400 | Msa0649250 | -0.801435 | 9.017490e-49 | -8.615850e-47 |
| Msa0267400 | Msa0654420 | 0.810455 | 1.142700e-50 | -8.615850e-47 |
| Msa0267400 | Msa0685080 | 0.802082 | 6.642786e-49 | -8.615850e-47 |
| Msa0267400 | Msa0720810 | 0.800978 | 1.118459e-48 | -8.615850e-47 |
| Msa0267400 | Msa0761950 | 0.808305 | 3.305879e-50 | -8.615850e-47 |
| Msa0267400 | Msa0803880 | 0.819278 | 1.263101e-52 | -8.615850e-47 |
| Msa0267400 | Msa0880910 | 0.828934 | 6.822877e-55 | -8.615850e-47 |
| Msa0267400 | Msa0896920 | 0.805332 | 1.405099e-49 | -8.615850e-47 |
| Msa0267400 | Msa0896950 | 0.805888 | 1.073838e-49 | -8.615850e-47 |
| Msa0267400 | Msa0898830 | -0.804961 | 1.680037e-49 | -8.615850e-47 |
| Msa0267400 | Msa0930210 | 0.827697 | 1.355817e-54 | -8.615850e-47 |
| Msa0267400 | Msa0946010 | 0.811579 | 6.524969e-51 | -8.615850e-47 |
| Msa0267400 | Msa0967780 | 0.822728 | 2.028466e-53 | -8.615850e-47 |
| Msa0267400 | Msa1006170 | 0.810655 | 1.034802e-50 | -8.615850e-47 |
| Msa0267400 | Msa1030320 | 0.801665 | 8.090447e-49 | -8.615850e-47 |
| Msa0267400 | Msa1035450 | 0.869602 | 2.738890e-66 | -8.615850e-47 |
| Msa0267400 | Msa1064940 | 0.801289 | 9.661308e-49 | -8.615850e-47 |
| Msa0267400 | Msa1075320 | 0.928012 | 5.265516e-92 | -8.615850e-47 |
| Msa0267400 | Msa1076280 | 0.801167 | 1.022975e-48 | -8.615850e-47 |
| Msa0267400 | Msa1106680 | 0.802958 | 4.382440e-49 | -8.615850e-47 |
| Msa0267400 | Msa1108560 | 0.822356 | 2.474636e-53 | -8.615850e-47 |
| Msa0267400 | Msa1116610 | 0.825843 | 3.757715e-54 | -8.615850e-47 |
| Msa0267400 | Msa1162750 | 0.934551 | 3.391978e-96 | -8.615850e-47 |
| Msa0267400 | Msa1170340 | 0.816561 | 5.189264e-52 | -8.615850e-47 |
| Msa0267400 | Msa1181090 | 0.842477 | 2.525294e-58 | -8.615850e-47 |
| Msa0267400 | Msa1188080 | 0.815862 | 7.437287e-52 | -8.615850e-47 |
| Msa0267400 | Msa1191640 | 0.823236 | 1.544268e-53 | -8.615850e-47 |
| Msa0267400 | Msa1200270 | 0.807512 | 4.875545e-50 | -8.615850e-47 |
| Msa0267400 | Msa1221290 | 0.836443 | 9.331099e-57 | -8.615850e-47 |
| Msa0267400 | Msa1245530 | 0.824967 | 6.056030e-54 | -8.615850e-47 |
| Msa0267400 | Msa1284020 | 0.809311 | 2.015033e-50 | -8.615850e-47 |
| Msa0267400 | Msa1322500 | 0.832833 | 7.541720e-56 | -8.615850e-47 |
| Msa0267400 | Msa1323260 | -0.814215 | 1.725478e-51 | -8.615850e-47 |
| Msa0267400 | Msa1337450 | 0.844026 | 9.754052e-59 | -8.615850e-47 |
| Msa0267400 | Msa1380740 | 0.813182 | 2.913982e-51 | -8.615850e-47 |
| Msa0267400 | Msa1387480 | 0.805595 | 1.237453e-49 | -8.615850e-47 |
| Msa0267400 | Msa1405830 | 0.809588 | 1.756893e-50 | -8.615850e-47 |
| Msa0267400 | Msa1441450 | 0.808241 | 3.412025e-50 | -8.615850e-47 |
| Msa0267400 | Msa1458270 | 0.801794 | 7.608966e-49 | -8.615850e-47 |
| Msa0267400 | Msa1461660 | 0.803471 | 3.431417e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267400 | MtrunA17_Chr7g0258911 | 98.227 | 282 | 5 | 0 | 1 | 282 | 1 | 282 | 0.0 | 580 |
| Msa0267400 | MtrunA17_Chr4g0072611 | 92.933 | 283 | 19 | 1 | 1 | 282 | 1 | 283 | 0.0 | 548 |
| Msa0267400 | MtrunA17_Chr4g0072671 | 85.932 | 263 | 33 | 2 | 21 | 279 | 23 | 285 | 6.52e-167 | 464 |
| Msa0267400 | MtrunA17_Chr4g0072601 | 74.377 | 281 | 67 | 1 | 4 | 279 | 3 | 283 | 2.23e-158 | 442 |
| Msa0267400 | MtrunA17_Chr4g0071341 | 77.239 | 268 | 60 | 1 | 16 | 282 | 17 | 284 | 1.45e-152 | 427 |
| Msa0267400 | MtrunA17_Chr2g0299061 | 72.202 | 277 | 72 | 1 | 8 | 279 | 10 | 286 | 2.72e-149 | 419 |
| Msa0267400 | MtrunA17_Chr8g0377841 | 71.119 | 277 | 75 | 1 | 3 | 279 | 10 | 281 | 5.45e-145 | 408 |
| Msa0267400 | MtrunA17_Chr3g0122031 | 73.063 | 271 | 67 | 1 | 10 | 280 | 14 | 278 | 1.44e-144 | 407 |
| Msa0267400 | MtrunA17_Chr3g0122021 | 73.529 | 272 | 64 | 2 | 10 | 280 | 14 | 278 | 2.09e-144 | 406 |
| Msa0267400 | MtrunA17_Chr4g0072681 | 74.897 | 243 | 53 | 2 | 45 | 279 | 1 | 243 | 1.95e-131 | 372 |
| Msa0267400 | MtrunA17_Chr8g0389641 | 64.074 | 270 | 55 | 1 | 11 | 280 | 16 | 243 | 1.19e-125 | 358 |
| Msa0267400 | MtrunA17_Chr5g0443391 | 54.579 | 273 | 119 | 2 | 8 | 280 | 12 | 279 | 7.53e-107 | 311 |
| Msa0267400 | MtrunA17_Chr6g0486581 | 52.878 | 278 | 124 | 3 | 6 | 279 | 9 | 283 | 3.32e-104 | 305 |
| Msa0267400 | MtrunA17_Chr3g0096651 | 55.172 | 261 | 112 | 2 | 21 | 280 | 27 | 283 | 2.23e-103 | 303 |
| Msa0267400 | MtrunA17_Chr7g0252601 | 51.890 | 291 | 126 | 4 | 1 | 280 | 1 | 288 | 5.57e-102 | 299 |
| Msa0267400 | MtrunA17_Chr6g0461761 | 53.448 | 290 | 121 | 4 | 1 | 279 | 1 | 287 | 5.63e-102 | 299 |
| Msa0267400 | MtrunA17_Chr6g0461731 | 53.901 | 282 | 116 | 4 | 9 | 279 | 32 | 310 | 7.37e-102 | 300 |
| Msa0267400 | MtrunA17_Chr7g0252631 | 56.154 | 260 | 108 | 3 | 24 | 280 | 32 | 288 | 2.00e-101 | 298 |
| Msa0267400 | MtrunA17_Chr7g0252621 | 54.815 | 270 | 112 | 4 | 14 | 280 | 26 | 288 | 2.71e-101 | 298 |
| Msa0267400 | MtrunA17_Chr4g0023961 | 50.530 | 283 | 126 | 5 | 7 | 279 | 10 | 288 | 1.35e-99 | 293 |
| Msa0267400 | MtrunA17_Chr2g0323161 | 51.095 | 274 | 120 | 5 | 16 | 279 | 17 | 286 | 1.19e-98 | 291 |
| Msa0267400 | MtrunA17_Chr4g0054451 | 49.104 | 279 | 133 | 6 | 6 | 279 | 15 | 289 | 6.89e-97 | 286 |
| Msa0267400 | MtrunA17_Chr4g0054431 | 49.638 | 276 | 130 | 6 | 8 | 279 | 17 | 287 | 3.42e-96 | 285 |
| Msa0267400 | MtrunA17_Chr1g0206681 | 48.399 | 281 | 143 | 1 | 3 | 281 | 13 | 293 | 4.30e-96 | 285 |
| Msa0267400 | MtrunA17_Chr1g0206081 | 47.619 | 294 | 138 | 5 | 2 | 281 | 5 | 296 | 1.46e-90 | 271 |
| Msa0267400 | MtrunA17_Chr8g0390201 | 56.122 | 196 | 80 | 3 | 89 | 279 | 15 | 209 | 2.90e-75 | 228 |
| Msa0267400 | MtrunA17_Chr8g0340001 | 45.992 | 237 | 117 | 5 | 48 | 279 | 1 | 231 | 7.02e-69 | 213 |
| Msa0267400 | MtrunA17_Chr4g0072641 | 77.778 | 126 | 14 | 2 | 154 | 279 | 37 | 148 | 3.76e-65 | 201 |
| Msa0267400 | MtrunA17_Chr4g0028221 | 41.509 | 265 | 138 | 7 | 23 | 279 | 49 | 304 | 2.97e-63 | 201 |
| Msa0267400 | MtrunA17_Chr7g0264731 | 40.755 | 265 | 140 | 7 | 23 | 279 | 36 | 291 | 1.11e-62 | 199 |
| Msa0267400 | MtrunA17_Chr1g0180451 | 40.000 | 265 | 142 | 6 | 23 | 279 | 39 | 294 | 3.54e-61 | 195 |
| Msa0267400 | MtrunA17_Chr2g0303861 | 39.655 | 290 | 153 | 11 | 1 | 280 | 1 | 278 | 1.15e-60 | 194 |
| Msa0267400 | MtrunA17_Chr2g0327411 | 40.892 | 269 | 143 | 8 | 19 | 279 | 49 | 309 | 2.67e-60 | 194 |
| Msa0267400 | MtrunA17_Chr8g0375981 | 36.395 | 294 | 168 | 8 | 1 | 279 | 1 | 290 | 7.13e-58 | 188 |
| Msa0267400 | MtrunA17_Chr2g0303721 | 38.408 | 289 | 150 | 10 | 1 | 276 | 1 | 274 | 2.00e-56 | 182 |
| Msa0267400 | MtrunA17_Chr1g0161951 | 40.698 | 258 | 136 | 8 | 32 | 279 | 41 | 291 | 2.71e-55 | 181 |
| Msa0267400 | MtrunA17_Chr7g0235541 | 45.161 | 217 | 105 | 6 | 71 | 281 | 1 | 209 | 6.96e-55 | 176 |
| Msa0267400 | MtrunA17_Chr8g0365231 | 36.742 | 264 | 154 | 7 | 28 | 280 | 50 | 311 | 9.94e-52 | 171 |
| Msa0267400 | MtrunA17_Chr5g0410621 | 35.115 | 262 | 156 | 6 | 32 | 282 | 50 | 308 | 2.08e-50 | 169 |
| Msa0267400 | MtrunA17_Chr8g0382041 | 35.379 | 277 | 148 | 10 | 24 | 282 | 34 | 297 | 3.48e-45 | 155 |
| Msa0267400 | MtrunA17_Chr4g0072631 | 66.667 | 78 | 19 | 2 | 1 | 71 | 1 | 78 | 1.45e-28 | 105 |
| Msa0267400 | MtrunA17_Chr8g0374231 | 45.714 | 105 | 52 | 3 | 180 | 281 | 1 | 103 | 2.80e-24 | 94.4 |
| Msa0267400 | MtrunA17_Chr8g0390181 | 50.000 | 84 | 40 | 1 | 8 | 91 | 12 | 93 | 4.75e-18 | 77.4 |
| Msa0267400 | MtrunA17_Chr8g0350711 | 32.759 | 174 | 109 | 4 | 46 | 217 | 54 | 221 | 2.41e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267400 | AT4G25810.1 | 75.000 | 280 | 67 | 2 | 3 | 279 | 4 | 283 | 1.18e-159 | 446 |
| Msa0267400 | AT5G57560.1 | 71.685 | 279 | 74 | 2 | 6 | 279 | 3 | 281 | 6.40e-154 | 431 |
| Msa0267400 | AT5G57550.1 | 69.014 | 284 | 77 | 2 | 5 | 280 | 3 | 283 | 2.06e-152 | 427 |
| Msa0267400 | AT4G30270.1 | 69.176 | 279 | 72 | 2 | 1 | 279 | 1 | 265 | 1.15e-146 | 412 |
| Msa0267400 | AT3G23730.1 | 66.431 | 283 | 90 | 2 | 3 | 280 | 5 | 287 | 2.00e-142 | 402 |
| Msa0267400 | AT5G57530.1 | 69.202 | 263 | 81 | 0 | 19 | 281 | 22 | 284 | 1.42e-139 | 395 |
| Msa0267400 | AT4G14130.1 | 65.714 | 280 | 95 | 1 | 2 | 280 | 6 | 285 | 4.47e-139 | 394 |
| Msa0267400 | AT5G57540.1 | 68.966 | 261 | 81 | 0 | 21 | 281 | 23 | 283 | 1.04e-138 | 392 |
| Msa0267400 | AT4G25820.1 | 69.173 | 266 | 82 | 0 | 16 | 281 | 22 | 287 | 2.80e-138 | 392 |
| Msa0267400 | AT5G48070.1 | 64.388 | 278 | 92 | 3 | 5 | 279 | 8 | 281 | 2.95e-138 | 391 |
| Msa0267400 | AT2G18800.1 | 65.141 | 284 | 86 | 4 | 9 | 279 | 13 | 296 | 1.26e-134 | 383 |
| Msa0267400 | AT1G65310.2 | 65.385 | 260 | 85 | 2 | 21 | 279 | 48 | 303 | 7.68e-124 | 355 |
| Msa0267400 | AT4G30280.1 | 62.319 | 276 | 97 | 3 | 7 | 279 | 10 | 281 | 1.10e-123 | 354 |
| Msa0267400 | AT1G65310.1 | 65.385 | 260 | 85 | 2 | 21 | 279 | 26 | 281 | 1.26e-123 | 354 |
| Msa0267400 | AT4G30290.1 | 62.545 | 275 | 96 | 3 | 8 | 279 | 6 | 276 | 1.54e-123 | 354 |
| Msa0267400 | AT5G13870.2 | 54.064 | 283 | 120 | 4 | 1 | 280 | 13 | 288 | 1.28e-102 | 301 |
| Msa0267400 | AT5G13870.1 | 54.064 | 283 | 120 | 4 | 1 | 280 | 13 | 288 | 1.28e-102 | 301 |
| Msa0267400 | AT5G13870.3 | 54.064 | 283 | 120 | 4 | 1 | 280 | 13 | 288 | 1.28e-102 | 301 |
| Msa0267400 | AT4G03210.1 | 49.462 | 279 | 133 | 4 | 6 | 280 | 11 | 285 | 4.74e-98 | 290 |
| Msa0267400 | AT2G06850.1 | 52.113 | 284 | 124 | 4 | 6 | 280 | 11 | 291 | 5.59e-98 | 290 |
| Msa0267400 | AT5G65730.1 | 47.985 | 273 | 140 | 2 | 9 | 280 | 20 | 291 | 8.16e-97 | 286 |
| Msa0267400 | AT2G14620.1 | 47.183 | 284 | 146 | 2 | 1 | 281 | 14 | 296 | 3.24e-94 | 280 |
| Msa0267400 | AT4G28850.1 | 48.399 | 281 | 132 | 4 | 10 | 279 | 9 | 287 | 6.37e-94 | 279 |
| Msa0267400 | AT4G37800.1 | 49.813 | 267 | 126 | 5 | 17 | 279 | 27 | 289 | 2.93e-93 | 278 |
| Msa0267400 | AT2G06850.2 | 57.576 | 231 | 92 | 3 | 53 | 280 | 4 | 231 | 3.97e-92 | 273 |
| Msa0267400 | AT4G03210.2 | 53.975 | 239 | 101 | 4 | 46 | 280 | 24 | 257 | 1.41e-91 | 272 |
| Msa0267400 | AT1G11545.1 | 47.917 | 288 | 130 | 7 | 8 | 281 | 20 | 301 | 6.92e-89 | 267 |
| Msa0267400 | AT4G13090.1 | 45.965 | 285 | 146 | 4 | 2 | 280 | 7 | 289 | 3.99e-83 | 252 |
| Msa0267400 | AT2G14620.2 | 50.435 | 230 | 110 | 2 | 55 | 281 | 18 | 246 | 8.08e-81 | 244 |
| Msa0267400 | AT3G25050.1 | 46.332 | 259 | 132 | 4 | 24 | 279 | 35 | 289 | 1.06e-79 | 243 |
| Msa0267400 | AT2G14620.3 | 51.131 | 221 | 104 | 2 | 64 | 281 | 16 | 235 | 7.43e-79 | 239 |
| Msa0267400 | AT4G13080.1 | 43.357 | 286 | 153 | 4 | 1 | 280 | 10 | 292 | 2.38e-78 | 239 |
| Msa0267400 | AT2G36870.1 | 41.887 | 265 | 137 | 6 | 23 | 279 | 42 | 297 | 1.36e-63 | 202 |
| Msa0267400 | AT3G44990.1 | 42.424 | 264 | 135 | 7 | 24 | 279 | 39 | 293 | 3.31e-60 | 193 |
| Msa0267400 | AT1G32170.1 | 34.448 | 299 | 176 | 8 | 1 | 282 | 1 | 296 | 7.17e-55 | 181 |
| Msa0267400 | AT1G10550.1 | 35.769 | 260 | 150 | 5 | 35 | 279 | 52 | 309 | 4.60e-53 | 175 |
| Msa0267400 | AT1G14720.1 | 36.226 | 265 | 157 | 7 | 23 | 279 | 30 | 290 | 4.85e-52 | 173 |
| Msa0267400 | AT2G01850.1 | 33.962 | 265 | 163 | 7 | 23 | 279 | 30 | 290 | 4.29e-48 | 163 |
| Msa0267400 | AT3G48580.1 | 35.955 | 267 | 149 | 9 | 14 | 279 | 28 | 273 | 1.44e-46 | 157 |
| Msa0267400 | AT4G18990.1 | 34.737 | 285 | 147 | 10 | 30 | 282 | 38 | 315 | 7.83e-46 | 158 |
| Msa0267400 | AT3G48580.3 | 35.683 | 227 | 129 | 7 | 54 | 279 | 4 | 214 | 3.51e-40 | 139 |
| Msa0267400 | AT4G18990.2 | 36.408 | 206 | 105 | 7 | 97 | 282 | 42 | 241 | 4.52e-38 | 135 |
| Msa0267400 | AT2G36870.2 | 45.324 | 139 | 66 | 3 | 23 | 153 | 42 | 178 | 4.13e-32 | 117 |
| Msa0267400 | AT3G48580.2 | 31.783 | 258 | 134 | 10 | 23 | 279 | 37 | 253 | 1.37e-29 | 112 |
Find 76 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGATGGATTGTGATATTT+TGG | 0.218711 | 2_2:+68980167 | None:intergenic |
| ATTTGATGTGCTTACATAAT+AGG | 0.234785 | 2_2:+68979851 | None:intergenic |
| AAGAATGGCAAGGTATTTAT+AGG | 0.244990 | 2_2:+68980190 | None:intergenic |
| GAAATTGACTTTGAATTCTT+AGG | 0.253040 | 2_2:-68979685 | Msa0267400:CDS |
| TGAGAATCTATTCTAGTCTT+TGG | 0.265403 | 2_2:-68979344 | Msa0267400:CDS |
| ATGTTCTTGAATTCTCTAAT+TGG | 0.274937 | 2_2:+68979405 | None:intergenic |
| AATGCATGCACTGTGTCTTC+TGG | 0.314712 | 2_2:-68979231 | Msa0267400:CDS |
| GTCTTTGGAATGCTGATGAT+TGG | 0.342081 | 2_2:-68979329 | Msa0267400:CDS |
| GAAATAATTTACCATAGAAA+TGG | 0.363559 | 2_2:+68978935 | None:intergenic |
| TTCACACCTATTCCATCCTC+TGG | 0.371800 | 2_2:-68979558 | Msa0267400:CDS |
| AGAATGGCAAGGTATTTATA+GGG | 0.386663 | 2_2:+68980191 | None:intergenic |
| AAAATGCCATTGGAAGCTAA+TGG | 0.394542 | 2_2:+68980120 | None:intergenic |
| ATTAGCATTGAAGTTTCTAT+AGG | 0.401233 | 2_2:+68979251 | None:intergenic |
| CTATAAAGAATCCATTTCTA+TGG | 0.407346 | 2_2:-68978946 | Msa0267400:three_prime_UTR |
| ACATTGGTATGAAGAATGTA+TGG | 0.415981 | 2_2:+68979646 | None:intergenic |
| TGCTTGGTTCTCAGAGGAGT+TGG | 0.433098 | 2_2:-68979172 | Msa0267400:CDS |
| AAGGCCCTGAGGAAATCTTT+TGG | 0.436526 | 2_2:+68979080 | None:intergenic |
| AGACTAGAATAGATTCTCAT+TGG | 0.441045 | 2_2:+68979348 | None:intergenic |
| CTTGACAAATCCTCTGGCTC+TGG | 0.442693 | 2_2:-68979960 | Msa0267400:CDS |
| ATGCAGCTTAAACTCGTTCC+TGG | 0.444564 | 2_2:-68979897 | Msa0267400:CDS |
| CTCGTTCCTGGCAACTCTGC+TGG | 0.457205 | 2_2:-68979885 | Msa0267400:CDS |
| TTGTCCCTTGACAAATCCTC+TGG | 0.468358 | 2_2:-68979966 | Msa0267400:CDS |
| TAGAATAGATTCTCATTGGT+TGG | 0.468992 | 2_2:+68979352 | None:intergenic |
| TCTTTGGAATGCTGATGATT+GGG | 0.473720 | 2_2:-68979328 | Msa0267400:CDS |
| GTGAGAAAGTGAGATGTTGA+TGG | 0.477554 | 2_2:+68980152 | None:intergenic |
| CACAGTCTAATAAGAATGCT+TGG | 0.481977 | 2_2:-68979188 | Msa0267400:CDS |
| ACAGTTGCAATTGCCTCTGC+TGG | 0.489680 | 2_2:-68980065 | Msa0267400:CDS |
| TGATACCAAAAGATTTCCTC+AGG | 0.490646 | 2_2:-68979085 | Msa0267400:CDS |
| TTCAAGAACATGGAATCAAA+TGG | 0.495147 | 2_2:-68979393 | Msa0267400:CDS |
| TGGGTTCCAGAGGATGGAAT+AGG | 0.498523 | 2_2:+68979552 | None:intergenic |
| GAGAGCAACAATTCTACCTA+TGG | 0.502278 | 2_2:-68979600 | Msa0267400:CDS |
| CTTAACAAGTCCACCTCTTG+TGG | 0.502433 | 2_2:+68979305 | None:intergenic |
| GTACTTACACAATGCGTTGT+GGG | 0.502506 | 2_2:+68979533 | None:intergenic |
| TTAATTCAGCTATCATCAAA+AGG | 0.502910 | 2_2:-68979721 | Msa0267400:intron |
| GTGGACTTGTTAAGACAGAT+TGG | 0.508499 | 2_2:-68979296 | Msa0267400:CDS |
| GCAACTCTTGAAAATGCCAT+TGG | 0.521914 | 2_2:+68980110 | None:intergenic |
| ATCAAGACTTTGATATAACA+TGG | 0.525397 | 2_2:-68980034 | Msa0267400:CDS |
| GGAAGCAGTGAAAGGAGCAT+TGG | 0.527846 | 2_2:+68979272 | None:intergenic |
| ACAGTGCCAGCAGAGTTGCC+AGG | 0.543526 | 2_2:+68979879 | None:intergenic |
| GCGTTGTGGGTTCCAGAGGA+TGG | 0.545929 | 2_2:+68979546 | None:intergenic |
| CTGCAGTTGGGTCAAACCAT+AGG | 0.546848 | 2_2:+68979584 | None:intergenic |
| AATGTGTTTAGCCAAGGAAA+AGG | 0.552403 | 2_2:-68979628 | Msa0267400:CDS |
| TAGGTGTGAAAATCTGCAGT+TGG | 0.552711 | 2_2:+68979571 | None:intergenic |
| AGGGCCTTCCTCAAGAATGC+AGG | 0.553967 | 2_2:-68979065 | Msa0267400:CDS |
| CTGTAGAGATCAAAATGACT+AGG | 0.554171 | 2_2:+68980084 | None:intergenic |
| AAATACAATACGAAGGGTTG+AGG | 0.556496 | 2_2:+68979011 | None:intergenic |
| CATACCAATGTGTTTAGCCA+AGG | 0.557351 | 2_2:-68979634 | Msa0267400:CDS |
| AGGTGTGAAAATCTGCAGTT+GGG | 0.562198 | 2_2:+68979572 | None:intergenic |
| CAAGGGACAAAGTAAGAAGT+TGG | 0.564881 | 2_2:+68979979 | None:intergenic |
| TTTCTATAGGAAGCAGTGAA+AGG | 0.568107 | 2_2:+68979264 | None:intergenic |
| ATCATCAAAAGGAGGTGCAT+GGG | 0.570048 | 2_2:-68979710 | Msa0267400:CDS |
| TCAAGACTTTGATATAACAT+GGG | 0.571188 | 2_2:-68980033 | Msa0267400:CDS |
| CAGAGCCAGAGGATTTGTCA+AGG | 0.573276 | 2_2:+68979961 | None:intergenic |
| TTTGATATAACATGGGGAGA+TGG | 0.574885 | 2_2:-68980026 | Msa0267400:CDS |
| CAAGTCATGAGAGGCTCAAG+TGG | 0.575997 | 2_2:-68979143 | Msa0267400:CDS |
| TAAACCATCCTGCATTCTTG+AGG | 0.578265 | 2_2:+68979057 | None:intergenic |
| TATCATCAAAAGGAGGTGCA+TGG | 0.582020 | 2_2:-68979711 | Msa0267400:CDS |
| CAATGCGTTGTGGGTTCCAG+AGG | 0.582602 | 2_2:+68979542 | None:intergenic |
| AGTACTTACACAATGCGTTG+TGG | 0.583264 | 2_2:+68979532 | None:intergenic |
| AATTAGAGAATTCAAGAACA+TGG | 0.587989 | 2_2:-68979403 | Msa0267400:CDS |
| GATGATTGGGCCACAAGAGG+TGG | 0.592351 | 2_2:-68979315 | Msa0267400:CDS |
| CCATCCTGCATTCTTGAGGA+AGG | 0.601607 | 2_2:+68979061 | None:intergenic |
| CATTGGTATGAAGAATGTAT+GGG | 0.604051 | 2_2:+68979647 | None:intergenic |
| AGAGCCAGAGGATTTGTCAA+GGG | 0.612252 | 2_2:+68979962 | None:intergenic |
| GGATTGAAAGCCAGAGCCAG+AGG | 0.618299 | 2_2:+68979950 | None:intergenic |
| CAAGACTTTGATATAACATG+GGG | 0.627432 | 2_2:-68980032 | Msa0267400:CDS |
| GAATTCTTAGGAAACTTGAG+TGG | 0.632192 | 2_2:-68979673 | Msa0267400:CDS |
| GCTGATGATTGGGCCACAAG+AGG | 0.655452 | 2_2:-68979318 | Msa0267400:CDS |
| CATTCTTGAGGAAGGCCCTG+AGG | 0.663273 | 2_2:+68979069 | None:intergenic |
| TAAGAATGCTTGGTTCTCAG+AGG | 0.671213 | 2_2:-68979178 | Msa0267400:CDS |
| CGTGCTAAAATACTCAACAA+TGG | 0.672548 | 2_2:-68980002 | Msa0267400:CDS |
| AAGTCATGAGAGGCTCAAGT+GGG | 0.675575 | 2_2:-68979142 | Msa0267400:CDS |
| TGGATTCTACAAGTCATGAG+AGG | 0.679866 | 2_2:-68979152 | Msa0267400:CDS |
| CCTTCCTCAAGAATGCAGGA+TGG | 0.683725 | 2_2:-68979061 | Msa0267400:CDS |
| ATTCAGCTATCATCAAAAGG+AGG | 0.688497 | 2_2:-68979718 | Msa0267400:intron |
| GATACCAAAAGATTTCCTCA+GGG | 0.691000 | 2_2:-68979084 | Msa0267400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAACTATACATTTTGTTTA+AGG | - | chr2_2:68979315-68979334 | Msa0267400:CDS | 15.0% |
| !!! | TTTTTTTTAATTACTTGTGT+CGG | - | chr2_2:68979636-68979655 | Msa0267400:CDS | 15.0% |
| !!! | ATAACTATACATTTTGTTTA+AGG | - | chr2_2:68979315-68979334 | Msa0267400:CDS | 15.0% |
| !!! | TTTTTTTTAATTACTTGTGT+CGG | - | chr2_2:68979636-68979655 | Msa0267400:CDS | 15.0% |
| !!! | TAAAAGTTCTTTTAACTCAT+TGG | - | chr2_2:68979365-68979384 | Msa0267400:CDS | 20.0% |
| !! | TTACAAAAATACAATACGAA+GGG | + | chr2_2:68980122-68980141 | None:intergenic | 20.0% |
| !! | ATTACAAAAATACAATACGA+AGG | + | chr2_2:68980123-68980142 | None:intergenic | 20.0% |
| !!! | TAAAAGTTCTTTTAACTCAT+TGG | - | chr2_2:68979365-68979384 | Msa0267400:CDS | 20.0% |
| !! | TTACAAAAATACAATACGAA+GGG | + | chr2_2:68980122-68980141 | None:intergenic | 20.0% |
| !! | ATTACAAAAATACAATACGA+AGG | + | chr2_2:68980123-68980142 | None:intergenic | 20.0% |
| !!! | ATTGTGATATTTTGGAAGAA+TGG | + | chr2_2:68978952-68978971 | None:intergenic | 25.0% |
| ! | ATCAAGACTTTGATATAACA+TGG | - | chr2_2:68979090-68979109 | Msa0267400:CDS | 25.0% |
| ! | TCAAGACTTTGATATAACAT+GGG | - | chr2_2:68979091-68979110 | Msa0267400:CDS | 25.0% |
| !! | TCCAAAAATGAATACCTTTT+TGG | - | chr2_2:68979194-68979213 | Msa0267400:CDS | 25.0% |
| ! | ATTTGATGTGCTTACATAAT+AGG | + | chr2_2:68979276-68979295 | None:intergenic | 25.0% |
| ! | TTAATTCAGCTATCATCAAA+AGG | - | chr2_2:68979403-68979422 | Msa0267400:CDS | 25.0% |
| !! | GAAATTGACTTTGAATTCTT+AGG | - | chr2_2:68979439-68979458 | Msa0267400:intron | 25.0% |
| !!! | TTTATTTTTCAGTTTCTCTG+TGG | - | chr2_2:68979688-68979707 | Msa0267400:CDS | 25.0% |
| ! | ATGTTCTTGAATTCTCTAAT+TGG | + | chr2_2:68979722-68979741 | None:intergenic | 25.0% |
| ! | AATTAGAGAATTCAAGAACA+TGG | - | chr2_2:68979721-68979740 | Msa0267400:intron | 25.0% |
| !! | ATTAGCATTGAAGTTTCTAT+AGG | + | chr2_2:68979876-68979895 | None:intergenic | 25.0% |
| ! | CTATAAAGAATCCATTTCTA+TGG | - | chr2_2:68980178-68980197 | Msa0267400:five_prime_UTR | 25.0% |
| !!! | ATTGTGATATTTTGGAAGAA+TGG | + | chr2_2:68978952-68978971 | None:intergenic | 25.0% |
| ! | ATCAAGACTTTGATATAACA+TGG | - | chr2_2:68979090-68979109 | Msa0267400:CDS | 25.0% |
| ! | TCAAGACTTTGATATAACAT+GGG | - | chr2_2:68979091-68979110 | Msa0267400:CDS | 25.0% |
| !! | TCCAAAAATGAATACCTTTT+TGG | - | chr2_2:68979194-68979213 | Msa0267400:CDS | 25.0% |
| ! | ATTTGATGTGCTTACATAAT+AGG | + | chr2_2:68979276-68979295 | None:intergenic | 25.0% |
| ! | TTAATTCAGCTATCATCAAA+AGG | - | chr2_2:68979403-68979422 | Msa0267400:CDS | 25.0% |
| !! | GAAATTGACTTTGAATTCTT+AGG | - | chr2_2:68979439-68979458 | Msa0267400:intron | 25.0% |
| !!! | TTTATTTTTCAGTTTCTCTG+TGG | - | chr2_2:68979688-68979707 | Msa0267400:CDS | 25.0% |
| ! | ATGTTCTTGAATTCTCTAAT+TGG | + | chr2_2:68979722-68979741 | None:intergenic | 25.0% |
| ! | AATTAGAGAATTCAAGAACA+TGG | - | chr2_2:68979721-68979740 | Msa0267400:intron | 25.0% |
| !! | ATTAGCATTGAAGTTTCTAT+AGG | + | chr2_2:68979876-68979895 | None:intergenic | 25.0% |
| ! | CTATAAAGAATCCATTTCTA+TGG | - | chr2_2:68980178-68980197 | Msa0267400:five_prime_UTR | 25.0% |
| !!! | GTTGATGGATTGTGATATTT+TGG | + | chr2_2:68978960-68978979 | None:intergenic | 30.0% |
| ! | AAAAATCCATTAGCTTCCAA+TGG | - | chr2_2:68978998-68979017 | Msa0267400:three_prime_UTR | 30.0% |
| CAAGACTTTGATATAACATG+GGG | - | chr2_2:68979092-68979111 | Msa0267400:CDS | 30.0% | |
| !!! | GCCAAAAAGGTATTCATTTT+TGG | + | chr2_2:68979198-68979217 | None:intergenic | 30.0% |
| ! | GCATATCAATTTTGCCAAAA+AGG | + | chr2_2:68979211-68979230 | None:intergenic | 30.0% |
| CATTGGTATGAAGAATGTAT+GGG | + | chr2_2:68979480-68979499 | None:intergenic | 30.0% | |
| ACATTGGTATGAAGAATGTA+TGG | + | chr2_2:68979481-68979500 | None:intergenic | 30.0% | |
| TTCAAGAACATGGAATCAAA+TGG | - | chr2_2:68979731-68979750 | Msa0267400:intron | 30.0% | |
| !!! | ATTCTCATTGGTTGGTTTTT+GGG | + | chr2_2:68979767-68979786 | None:intergenic | 30.0% |
| TAGAATAGATTCTCATTGGT+TGG | + | chr2_2:68979775-68979794 | None:intergenic | 30.0% | |
| AGACTAGAATAGATTCTCAT+TGG | + | chr2_2:68979779-68979798 | None:intergenic | 30.0% | |
| ! | TGAGAATCTATTCTAGTCTT+TGG | - | chr2_2:68979780-68979799 | Msa0267400:intron | 30.0% |
| !!! | GTTGATGGATTGTGATATTT+TGG | + | chr2_2:68978960-68978979 | None:intergenic | 30.0% |
| ! | AAAAATCCATTAGCTTCCAA+TGG | - | chr2_2:68978998-68979017 | Msa0267400:three_prime_UTR | 30.0% |
| CAAGACTTTGATATAACATG+GGG | - | chr2_2:68979092-68979111 | Msa0267400:CDS | 30.0% | |
| !!! | GCCAAAAAGGTATTCATTTT+TGG | + | chr2_2:68979198-68979217 | None:intergenic | 30.0% |
| ! | GCATATCAATTTTGCCAAAA+AGG | + | chr2_2:68979211-68979230 | None:intergenic | 30.0% |
| CATTGGTATGAAGAATGTAT+GGG | + | chr2_2:68979480-68979499 | None:intergenic | 30.0% | |
| ACATTGGTATGAAGAATGTA+TGG | + | chr2_2:68979481-68979500 | None:intergenic | 30.0% | |
| TTCAAGAACATGGAATCAAA+TGG | - | chr2_2:68979731-68979750 | Msa0267400:intron | 30.0% | |
| !!! | ATTCTCATTGGTTGGTTTTT+GGG | + | chr2_2:68979767-68979786 | None:intergenic | 30.0% |
| TAGAATAGATTCTCATTGGT+TGG | + | chr2_2:68979775-68979794 | None:intergenic | 30.0% | |
| AGACTAGAATAGATTCTCAT+TGG | + | chr2_2:68979779-68979798 | None:intergenic | 30.0% | |
| ! | TGAGAATCTATTCTAGTCTT+TGG | - | chr2_2:68979780-68979799 | Msa0267400:intron | 30.0% |
| !! | GATATTTTGGAAGAATGGCA+AGG | + | chr2_2:68978947-68978966 | None:intergenic | 35.0% |
| AAAATGCCATTGGAAGCTAA+TGG | + | chr2_2:68979007-68979026 | None:intergenic | 35.0% | |
| CTGTAGAGATCAAAATGACT+AGG | + | chr2_2:68979043-68979062 | None:intergenic | 35.0% | |
| TTGATAAAAATTGCCAGCAG+AGG | + | chr2_2:68979075-68979094 | None:intergenic | 35.0% | |
| TTTGATATAACATGGGGAGA+TGG | - | chr2_2:68979098-68979117 | Msa0267400:CDS | 35.0% | |
| CGTGCTAAAATACTCAACAA+TGG | - | chr2_2:68979122-68979141 | Msa0267400:CDS | 35.0% | |
| ATTCAGCTATCATCAAAAGG+AGG | - | chr2_2:68979406-68979425 | Msa0267400:CDS | 35.0% | |
| GAATTCTTAGGAAACTTGAG+TGG | - | chr2_2:68979451-68979470 | Msa0267400:intron | 35.0% | |
| ! | TTTTCCTTGGCTAAACACAT+TGG | + | chr2_2:68979497-68979516 | None:intergenic | 35.0% |
| AATGTGTTTAGCCAAGGAAA+AGG | - | chr2_2:68979496-68979515 | Msa0267400:intron | 35.0% | |
| !! | TTTTTCAGTTTCTCTGTGGA+TGG | - | chr2_2:68979692-68979711 | Msa0267400:CDS | 35.0% |
| !!! | ATTGGTTGGTTTTTGGGAAA+TGG | + | chr2_2:68979761-68979780 | None:intergenic | 35.0% |
| !!! | GATTCTCATTGGTTGGTTTT+TGG | + | chr2_2:68979768-68979787 | None:intergenic | 35.0% |
| !! | TCTTTGGAATGCTGATGATT+GGG | - | chr2_2:68979796-68979815 | Msa0267400:intron | 35.0% |
| TTTCTATAGGAAGCAGTGAA+AGG | + | chr2_2:68979863-68979882 | None:intergenic | 35.0% | |
| CACAGTCTAATAAGAATGCT+TGG | - | chr2_2:68979936-68979955 | Msa0267400:CDS | 35.0% | |
| TGATACCAAAAGATTTCCTC+AGG | - | chr2_2:68980039-68980058 | Msa0267400:CDS | 35.0% | |
| GATACCAAAAGATTTCCTCA+GGG | - | chr2_2:68980040-68980059 | Msa0267400:CDS | 35.0% | |
| AAATACAATACGAAGGGTTG+AGG | + | chr2_2:68980116-68980135 | None:intergenic | 35.0% | |
| !! | GATATTTTGGAAGAATGGCA+AGG | + | chr2_2:68978947-68978966 | None:intergenic | 35.0% |
| AAAATGCCATTGGAAGCTAA+TGG | + | chr2_2:68979007-68979026 | None:intergenic | 35.0% | |
| CTGTAGAGATCAAAATGACT+AGG | + | chr2_2:68979043-68979062 | None:intergenic | 35.0% | |
| TTGATAAAAATTGCCAGCAG+AGG | + | chr2_2:68979075-68979094 | None:intergenic | 35.0% | |
| TTTGATATAACATGGGGAGA+TGG | - | chr2_2:68979098-68979117 | Msa0267400:CDS | 35.0% | |
| CGTGCTAAAATACTCAACAA+TGG | - | chr2_2:68979122-68979141 | Msa0267400:CDS | 35.0% | |
| ATTCAGCTATCATCAAAAGG+AGG | - | chr2_2:68979406-68979425 | Msa0267400:CDS | 35.0% | |
| GAATTCTTAGGAAACTTGAG+TGG | - | chr2_2:68979451-68979470 | Msa0267400:intron | 35.0% | |
| ! | TTTTCCTTGGCTAAACACAT+TGG | + | chr2_2:68979497-68979516 | None:intergenic | 35.0% |
| AATGTGTTTAGCCAAGGAAA+AGG | - | chr2_2:68979496-68979515 | Msa0267400:intron | 35.0% | |
| !! | TTTTTCAGTTTCTCTGTGGA+TGG | - | chr2_2:68979692-68979711 | Msa0267400:CDS | 35.0% |
| !!! | ATTGGTTGGTTTTTGGGAAA+TGG | + | chr2_2:68979761-68979780 | None:intergenic | 35.0% |
| !!! | GATTCTCATTGGTTGGTTTT+TGG | + | chr2_2:68979768-68979787 | None:intergenic | 35.0% |
| !! | TCTTTGGAATGCTGATGATT+GGG | - | chr2_2:68979796-68979815 | Msa0267400:intron | 35.0% |
| TTTCTATAGGAAGCAGTGAA+AGG | + | chr2_2:68979863-68979882 | None:intergenic | 35.0% | |
| CACAGTCTAATAAGAATGCT+TGG | - | chr2_2:68979936-68979955 | Msa0267400:CDS | 35.0% | |
| TGATACCAAAAGATTTCCTC+AGG | - | chr2_2:68980039-68980058 | Msa0267400:CDS | 35.0% | |
| GATACCAAAAGATTTCCTCA+GGG | - | chr2_2:68980040-68980059 | Msa0267400:CDS | 35.0% | |
| AAATACAATACGAAGGGTTG+AGG | + | chr2_2:68980116-68980135 | None:intergenic | 35.0% | |
| GTGAGAAAGTGAGATGTTGA+TGG | + | chr2_2:68978975-68978994 | None:intergenic | 40.0% | |
| GCAACTCTTGAAAATGCCAT+TGG | + | chr2_2:68979017-68979036 | None:intergenic | 40.0% | |
| CAAGGGACAAAGTAAGAAGT+TGG | + | chr2_2:68979148-68979167 | None:intergenic | 40.0% | |
| ! | TATCATCAAAAGGAGGTGCA+TGG | - | chr2_2:68979413-68979432 | Msa0267400:CDS | 40.0% |
| ! | ATCATCAAAAGGAGGTGCAT+GGG | - | chr2_2:68979414-68979433 | Msa0267400:CDS | 40.0% |
| CATACCAATGTGTTTAGCCA+AGG | - | chr2_2:68979490-68979509 | Msa0267400:intron | 40.0% | |
| GAGAGCAACAATTCTACCTA+TGG | - | chr2_2:68979524-68979543 | Msa0267400:intron | 40.0% | |
| AGGTGTGAAAATCTGCAGTT+GGG | + | chr2_2:68979555-68979574 | None:intergenic | 40.0% | |
| TAGGTGTGAAAATCTGCAGT+TGG | + | chr2_2:68979556-68979575 | None:intergenic | 40.0% | |
| GTACTTACACAATGCGTTGT+GGG | + | chr2_2:68979594-68979613 | None:intergenic | 40.0% | |
| AGTACTTACACAATGCGTTG+TGG | + | chr2_2:68979595-68979614 | None:intergenic | 40.0% | |
| !! | GTCTTTGGAATGCTGATGAT+TGG | - | chr2_2:68979795-68979814 | Msa0267400:intron | 40.0% |
| !! | GTGGACTTGTTAAGACAGAT+TGG | - | chr2_2:68979828-68979847 | Msa0267400:intron | 40.0% |
| ! | TAAGAATGCTTGGTTCTCAG+AGG | - | chr2_2:68979946-68979965 | Msa0267400:CDS | 40.0% |
| TGGATTCTACAAGTCATGAG+AGG | - | chr2_2:68979972-68979991 | Msa0267400:CDS | 40.0% | |
| TAAACCATCCTGCATTCTTG+AGG | + | chr2_2:68980070-68980089 | None:intergenic | 40.0% | |
| GTGAGAAAGTGAGATGTTGA+TGG | + | chr2_2:68978975-68978994 | None:intergenic | 40.0% | |
| GCAACTCTTGAAAATGCCAT+TGG | + | chr2_2:68979017-68979036 | None:intergenic | 40.0% | |
| CAAGGGACAAAGTAAGAAGT+TGG | + | chr2_2:68979148-68979167 | None:intergenic | 40.0% | |
| ! | TATCATCAAAAGGAGGTGCA+TGG | - | chr2_2:68979413-68979432 | Msa0267400:CDS | 40.0% |
| ! | ATCATCAAAAGGAGGTGCAT+GGG | - | chr2_2:68979414-68979433 | Msa0267400:CDS | 40.0% |
| CATACCAATGTGTTTAGCCA+AGG | - | chr2_2:68979490-68979509 | Msa0267400:intron | 40.0% | |
| GAGAGCAACAATTCTACCTA+TGG | - | chr2_2:68979524-68979543 | Msa0267400:intron | 40.0% | |
| AGGTGTGAAAATCTGCAGTT+GGG | + | chr2_2:68979555-68979574 | None:intergenic | 40.0% | |
| TAGGTGTGAAAATCTGCAGT+TGG | + | chr2_2:68979556-68979575 | None:intergenic | 40.0% | |
| GTACTTACACAATGCGTTGT+GGG | + | chr2_2:68979594-68979613 | None:intergenic | 40.0% | |
| AGTACTTACACAATGCGTTG+TGG | + | chr2_2:68979595-68979614 | None:intergenic | 40.0% | |
| !! | GTCTTTGGAATGCTGATGAT+TGG | - | chr2_2:68979795-68979814 | Msa0267400:intron | 40.0% |
| !! | GTGGACTTGTTAAGACAGAT+TGG | - | chr2_2:68979828-68979847 | Msa0267400:intron | 40.0% |
| ! | TAAGAATGCTTGGTTCTCAG+AGG | - | chr2_2:68979946-68979965 | Msa0267400:CDS | 40.0% |
| TGGATTCTACAAGTCATGAG+AGG | - | chr2_2:68979972-68979991 | Msa0267400:CDS | 40.0% | |
| TAAACCATCCTGCATTCTTG+AGG | + | chr2_2:68980070-68980089 | None:intergenic | 40.0% | |
| TTGTCCCTTGACAAATCCTC+TGG | - | chr2_2:68979158-68979177 | Msa0267400:CDS | 45.0% | |
| AGAGCCAGAGGATTTGTCAA+GGG | + | chr2_2:68979165-68979184 | None:intergenic | 45.0% | |
| ATGCAGCTTAAACTCGTTCC+TGG | - | chr2_2:68979227-68979246 | Msa0267400:CDS | 45.0% | |
| TTCACACCTATTCCATCCTC+TGG | - | chr2_2:68979566-68979585 | Msa0267400:CDS | 45.0% | |
| CTTAACAAGTCCACCTCTTG+TGG | + | chr2_2:68979822-68979841 | None:intergenic | 45.0% | |
| AATGCATGCACTGTGTCTTC+TGG | - | chr2_2:68979893-68979912 | Msa0267400:CDS | 45.0% | |
| AAGTCATGAGAGGCTCAAGT+GGG | - | chr2_2:68979982-68980001 | Msa0267400:CDS | 45.0% | |
| ! | AAGGCCCTGAGGAAATCTTT+TGG | + | chr2_2:68980047-68980066 | None:intergenic | 45.0% |
| TTGTCCCTTGACAAATCCTC+TGG | - | chr2_2:68979158-68979177 | Msa0267400:CDS | 45.0% | |
| AGAGCCAGAGGATTTGTCAA+GGG | + | chr2_2:68979165-68979184 | None:intergenic | 45.0% | |
| ATGCAGCTTAAACTCGTTCC+TGG | - | chr2_2:68979227-68979246 | Msa0267400:CDS | 45.0% | |
| TTCACACCTATTCCATCCTC+TGG | - | chr2_2:68979566-68979585 | Msa0267400:CDS | 45.0% | |
| CTTAACAAGTCCACCTCTTG+TGG | + | chr2_2:68979822-68979841 | None:intergenic | 45.0% | |
| AATGCATGCACTGTGTCTTC+TGG | - | chr2_2:68979893-68979912 | Msa0267400:CDS | 45.0% | |
| AAGTCATGAGAGGCTCAAGT+GGG | - | chr2_2:68979982-68980001 | Msa0267400:CDS | 45.0% | |
| ! | AAGGCCCTGAGGAAATCTTT+TGG | + | chr2_2:68980047-68980066 | None:intergenic | 45.0% |
| !!! | ATTAAAAAAAATCAATTTTA+AGG | + | chr2_2:68979627-68979646 | None:intergenic | 5.0% |
| !!! | ATTAAAAAAAATCAATTTTA+AGG | + | chr2_2:68979627-68979646 | None:intergenic | 5.0% |
| ACAGTTGCAATTGCCTCTGC+TGG | - | chr2_2:68979059-68979078 | Msa0267400:CDS | 50.0% | |
| CAGAGCCAGAGGATTTGTCA+AGG | + | chr2_2:68979166-68979185 | None:intergenic | 50.0% | |
| ! | CTTGACAAATCCTCTGGCTC+TGG | - | chr2_2:68979164-68979183 | Msa0267400:CDS | 50.0% |
| ! | GCTCTCTGTTGCCTTTTCCT+TGG | + | chr2_2:68979510-68979529 | None:intergenic | 50.0% |
| CTGCAGTTGGGTCAAACCAT+AGG | + | chr2_2:68979543-68979562 | None:intergenic | 50.0% | |
| TGGGTTCCAGAGGATGGAAT+AGG | + | chr2_2:68979575-68979594 | None:intergenic | 50.0% | |
| ! | GGAAGCAGTGAAAGGAGCAT+TGG | + | chr2_2:68979855-68979874 | None:intergenic | 50.0% |
| ! | TGCTTGGTTCTCAGAGGAGT+TGG | - | chr2_2:68979952-68979971 | Msa0267400:CDS | 50.0% |
| CAAGTCATGAGAGGCTCAAG+TGG | - | chr2_2:68979981-68980000 | Msa0267400:CDS | 50.0% | |
| CCATCCTGCATTCTTGAGGA+AGG | + | chr2_2:68980066-68980085 | None:intergenic | 50.0% | |
| CCTTCCTCAAGAATGCAGGA+TGG | - | chr2_2:68980063-68980082 | Msa0267400:CDS | 50.0% | |
| ACAGTTGCAATTGCCTCTGC+TGG | - | chr2_2:68979059-68979078 | Msa0267400:CDS | 50.0% | |
| CAGAGCCAGAGGATTTGTCA+AGG | + | chr2_2:68979166-68979185 | None:intergenic | 50.0% | |
| ! | CTTGACAAATCCTCTGGCTC+TGG | - | chr2_2:68979164-68979183 | Msa0267400:CDS | 50.0% |
| ! | GCTCTCTGTTGCCTTTTCCT+TGG | + | chr2_2:68979510-68979529 | None:intergenic | 50.0% |
| CTGCAGTTGGGTCAAACCAT+AGG | + | chr2_2:68979543-68979562 | None:intergenic | 50.0% | |
| TGGGTTCCAGAGGATGGAAT+AGG | + | chr2_2:68979575-68979594 | None:intergenic | 50.0% | |
| ! | GGAAGCAGTGAAAGGAGCAT+TGG | + | chr2_2:68979855-68979874 | None:intergenic | 50.0% |
| ! | TGCTTGGTTCTCAGAGGAGT+TGG | - | chr2_2:68979952-68979971 | Msa0267400:CDS | 50.0% |
| CAAGTCATGAGAGGCTCAAG+TGG | - | chr2_2:68979981-68980000 | Msa0267400:CDS | 50.0% | |
| CCATCCTGCATTCTTGAGGA+AGG | + | chr2_2:68980066-68980085 | None:intergenic | 50.0% | |
| CCTTCCTCAAGAATGCAGGA+TGG | - | chr2_2:68980063-68980082 | Msa0267400:CDS | 50.0% | |
| GGATTGAAAGCCAGAGCCAG+AGG | + | chr2_2:68979177-68979196 | None:intergenic | 55.0% | |
| CAATGCGTTGTGGGTTCCAG+AGG | + | chr2_2:68979585-68979604 | None:intergenic | 55.0% | |
| GCTGATGATTGGGCCACAAG+AGG | - | chr2_2:68979806-68979825 | Msa0267400:intron | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | - | chr2_2:68979809-68979828 | Msa0267400:intron | 55.0% | |
| CATTCTTGAGGAAGGCCCTG+AGG | + | chr2_2:68980058-68980077 | None:intergenic | 55.0% | |
| AGGGCCTTCCTCAAGAATGC+AGG | - | chr2_2:68980059-68980078 | Msa0267400:CDS | 55.0% | |
| GGATTGAAAGCCAGAGCCAG+AGG | + | chr2_2:68979177-68979196 | None:intergenic | 55.0% | |
| CAATGCGTTGTGGGTTCCAG+AGG | + | chr2_2:68979585-68979604 | None:intergenic | 55.0% | |
| GCTGATGATTGGGCCACAAG+AGG | - | chr2_2:68979806-68979825 | Msa0267400:intron | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | - | chr2_2:68979809-68979828 | Msa0267400:intron | 55.0% | |
| CATTCTTGAGGAAGGCCCTG+AGG | + | chr2_2:68980058-68980077 | None:intergenic | 55.0% | |
| AGGGCCTTCCTCAAGAATGC+AGG | - | chr2_2:68980059-68980078 | Msa0267400:CDS | 55.0% | |
| CTCGTTCCTGGCAACTCTGC+TGG | - | chr2_2:68979239-68979258 | Msa0267400:CDS | 60.0% | |
| ACAGTGCCAGCAGAGTTGCC+AGG | + | chr2_2:68979248-68979267 | None:intergenic | 60.0% | |
| GCGTTGTGGGTTCCAGAGGA+TGG | + | chr2_2:68979581-68979600 | None:intergenic | 60.0% | |
| CTCGTTCCTGGCAACTCTGC+TGG | - | chr2_2:68979239-68979258 | Msa0267400:CDS | 60.0% | |
| ACAGTGCCAGCAGAGTTGCC+AGG | + | chr2_2:68979248-68979267 | None:intergenic | 60.0% | |
| GCGTTGTGGGTTCCAGAGGA+TGG | + | chr2_2:68979581-68979600 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 68978936 | 68980210 | 68978936 | ID=Msa0267400;Name=Msa0267400 |
| chr2_2 | mRNA | 68978936 | 68980210 | 68978936 | ID=Msa0267400-mRNA-1;Parent=Msa0267400;Name=Msa0267400-mRNA-1;_AED=0.03;_eAED=0.03;_QI=81|1|1|1|1|1|3|120|282 |
| chr2_2 | exon | 68978936 | 68979446 | 68978936 | ID=Msa0267400-mRNA-1:exon:21893;Parent=Msa0267400-mRNA-1 |
| chr2_2 | exon | 68979541 | 68979734 | 68979541 | ID=Msa0267400-mRNA-1:exon:21892;Parent=Msa0267400-mRNA-1 |
| chr2_2 | exon | 68979866 | 68980210 | 68979866 | ID=Msa0267400-mRNA-1:exon:21891;Parent=Msa0267400-mRNA-1 |
| chr2_2 | five_prime_UTR | 68980130 | 68980210 | 68980130 | ID=Msa0267400-mRNA-1:five_prime_utr;Parent=Msa0267400-mRNA-1 |
| chr2_2 | CDS | 68979866 | 68980129 | 68979866 | ID=Msa0267400-mRNA-1:cds;Parent=Msa0267400-mRNA-1 |
| chr2_2 | CDS | 68979541 | 68979734 | 68979541 | ID=Msa0267400-mRNA-1:cds;Parent=Msa0267400-mRNA-1 |
| chr2_2 | CDS | 68979056 | 68979446 | 68979056 | ID=Msa0267400-mRNA-1:cds;Parent=Msa0267400-mRNA-1 |
| chr2_2 | three_prime_UTR | 68978936 | 68979055 | 68978936 | ID=Msa0267400-mRNA-1:three_prime_utr;Parent=Msa0267400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
