Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035450 | XP_003625289.1 | 97.872 | 282 | 6 | 0 | 1 | 282 | 1 | 282 | 0.0 | 578 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035450 | sp|Q38910|XTH23_ARATH | 75.000 | 280 | 67 | 2 | 3 | 279 | 4 | 283 | 5.19e-158 | 444 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035450 | G7KW97 | 97.872 | 282 | 6 | 0 | 1 | 282 | 1 | 282 | 0.0 | 578 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006080 | Msa1035450 | 0.801971 | 6.998713e-49 | -8.615850e-47 |
| Msa0013270 | Msa1035450 | 0.801615 | 8.280823e-49 | -8.615850e-47 |
| Msa0037180 | Msa1035450 | 0.809264 | 2.061835e-50 | -8.615850e-47 |
| Msa0040210 | Msa1035450 | 0.802963 | 4.370631e-49 | -8.615850e-47 |
| Msa0045810 | Msa1035450 | 0.818239 | 2.174631e-52 | -8.615850e-47 |
| Msa0062190 | Msa1035450 | 0.807056 | 6.090507e-50 | -8.615850e-47 |
| Msa0087900 | Msa1035450 | 0.825265 | 5.152192e-54 | -8.615850e-47 |
| Msa0092220 | Msa1035450 | 0.817264 | 3.608338e-52 | -8.615850e-47 |
| Msa0120450 | Msa1035450 | 0.804321 | 2.284618e-49 | -8.615850e-47 |
| Msa0618680 | Msa1035450 | 0.840583 | 7.969079e-58 | -8.615850e-47 |
| Msa0618700 | Msa1035450 | 0.831301 | 1.803698e-55 | -8.615850e-47 |
| Msa0701660 | Msa1035450 | 0.804710 | 1.895678e-49 | -8.615850e-47 |
| Msa0753270 | Msa1035450 | 0.806851 | 6.730724e-50 | -8.615850e-47 |
| Msa0831890 | Msa1035450 | 0.804524 | 2.072329e-49 | -8.615850e-47 |
| Msa0134570 | Msa1035450 | 0.811061 | 8.450991e-51 | -8.615850e-47 |
| Msa0203880 | Msa1035450 | 0.805741 | 1.153360e-49 | -8.615850e-47 |
| Msa0220090 | Msa1035450 | 0.808984 | 2.367369e-50 | -8.615850e-47 |
| Msa0369990 | Msa1035450 | 0.802703 | 4.946796e-49 | -8.615850e-47 |
| Msa0374040 | Msa1035450 | 0.823663 | 1.226952e-53 | -8.615850e-47 |
| Msa0380110 | Msa1035450 | 0.808335 | 3.257499e-50 | -8.615850e-47 |
| Msa0390160 | Msa1035450 | 0.803569 | 3.274927e-49 | -8.615850e-47 |
| Msa0417400 | Msa1035450 | 0.811008 | 8.678577e-51 | -8.615850e-47 |
| Msa1035450 | Msa1041250 | 0.838241 | 3.232839e-57 | -8.615850e-47 |
| Msa1035450 | Msa1069350 | 0.810757 | 9.834747e-51 | -8.615850e-47 |
| Msa1035450 | Msa1075320 | 0.864241 | 1.400997e-64 | -8.615850e-47 |
| Msa1035450 | Msa1108560 | 0.814490 | 1.500045e-51 | -8.615850e-47 |
| Msa1035450 | Msa1116610 | 0.819724 | 9.995237e-53 | -8.615850e-47 |
| Msa1035450 | Msa1147010 | 0.800741 | 1.250136e-48 | -8.615850e-47 |
| Msa1035450 | Msa1156240 | 0.802982 | 4.331542e-49 | -8.615850e-47 |
| Msa1035450 | Msa1162750 | 0.883040 | 6.281042e-71 | -8.615850e-47 |
| Msa1035450 | Msa1170340 | 0.815167 | 1.062233e-51 | -8.615850e-47 |
| Msa1035450 | Msa1181090 | 0.830882 | 2.286180e-55 | -8.615850e-47 |
| Msa1035450 | Msa1186340 | 0.825376 | 4.848558e-54 | -8.615850e-47 |
| Msa1035450 | Msa1191640 | 0.813417 | 2.587137e-51 | -8.615850e-47 |
| Msa1035450 | Msa1263110 | 0.820988 | 5.126882e-53 | -8.615850e-47 |
| Msa1035450 | Msa1267990 | 0.822468 | 2.331413e-53 | -8.615850e-47 |
| Msa1035450 | Msa1284020 | 0.821960 | 3.058371e-53 | -8.615850e-47 |
| Msa1035450 | Msa1311370 | 0.811915 | 5.512074e-51 | -8.615850e-47 |
| Msa1035450 | Msa1321970 | 0.819009 | 1.454543e-52 | -8.615850e-47 |
| Msa1035450 | Msa1322500 | 0.815163 | 1.064024e-51 | -8.615850e-47 |
| Msa1035450 | Msa1337450 | 0.805983 | 1.025763e-49 | -8.615850e-47 |
| Msa1035450 | Msa1366480 | 0.815399 | 9.429053e-52 | -8.615850e-47 |
| Msa0248320 | Msa1035450 | 0.806255 | 8.989582e-50 | -8.615850e-47 |
| Msa0267400 | Msa1035450 | 0.869602 | 2.738890e-66 | -8.615850e-47 |
| Msa0272840 | Msa1035450 | 0.803212 | 3.882007e-49 | -8.615850e-47 |
| Msa0299030 | Msa1035450 | 0.800882 | 1.170045e-48 | -8.615850e-47 |
| Msa0303900 | Msa1035450 | 0.805233 | 1.473744e-49 | -8.615850e-47 |
| Msa0333770 | Msa1035450 | 0.813008 | 3.181511e-51 | -8.615850e-47 |
| Msa0496070 | Msa1035450 | 0.819393 | 1.189179e-52 | -8.615850e-47 |
| Msa0502970 | Msa1035450 | 0.801451 | 8.948157e-49 | -8.615850e-47 |
| Msa0524370 | Msa1035450 | 0.807184 | 5.722367e-50 | -8.615850e-47 |
| Msa0565700 | Msa1035450 | 0.840300 | 9.447446e-58 | -8.615850e-47 |
| Msa0587870 | Msa1035450 | 0.820537 | 6.508241e-53 | -8.615850e-47 |
| Msa0873880 | Msa1035450 | 0.807963 | 3.909132e-50 | -8.615850e-47 |
| Msa0880910 | Msa1035450 | 0.819382 | 1.196315e-52 | -8.615850e-47 |
| Msa0896950 | Msa1035450 | 0.809080 | 2.257838e-50 | -8.615850e-47 |
| Msa0932140 | Msa1035450 | 0.812600 | 3.906904e-51 | -8.615850e-47 |
| Msa0967780 | Msa1035450 | 0.812372 | 4.383714e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035450 | MtrunA17_Chr7g0258911 | 97.872 | 282 | 6 | 0 | 1 | 282 | 1 | 282 | 0.0 | 578 |
| Msa1035450 | MtrunA17_Chr4g0072611 | 92.580 | 283 | 20 | 1 | 1 | 282 | 1 | 283 | 0.0 | 546 |
| Msa1035450 | MtrunA17_Chr4g0072671 | 85.551 | 263 | 34 | 2 | 21 | 279 | 23 | 285 | 2.71e-166 | 462 |
| Msa1035450 | MtrunA17_Chr4g0072601 | 74.021 | 281 | 68 | 1 | 4 | 279 | 3 | 283 | 7.36e-158 | 441 |
| Msa1035450 | MtrunA17_Chr4g0071341 | 77.239 | 268 | 60 | 1 | 16 | 282 | 17 | 284 | 6.41e-152 | 426 |
| Msa1035450 | MtrunA17_Chr2g0299061 | 72.202 | 277 | 72 | 1 | 8 | 279 | 10 | 286 | 8.99e-149 | 418 |
| Msa1035450 | MtrunA17_Chr8g0377841 | 71.119 | 277 | 75 | 1 | 3 | 279 | 10 | 281 | 1.88e-144 | 407 |
| Msa1035450 | MtrunA17_Chr3g0122031 | 73.063 | 271 | 67 | 1 | 10 | 280 | 14 | 278 | 6.67e-144 | 405 |
| Msa1035450 | MtrunA17_Chr3g0122021 | 73.529 | 272 | 64 | 2 | 10 | 280 | 14 | 278 | 6.97e-144 | 405 |
| Msa1035450 | MtrunA17_Chr4g0072681 | 74.897 | 243 | 53 | 2 | 45 | 279 | 1 | 243 | 6.37e-131 | 371 |
| Msa1035450 | MtrunA17_Chr8g0389641 | 64.074 | 270 | 55 | 1 | 11 | 280 | 16 | 243 | 3.33e-125 | 357 |
| Msa1035450 | MtrunA17_Chr5g0443391 | 54.579 | 273 | 119 | 2 | 8 | 280 | 12 | 279 | 2.10e-106 | 310 |
| Msa1035450 | MtrunA17_Chr6g0486581 | 52.518 | 278 | 125 | 3 | 6 | 279 | 9 | 283 | 1.17e-103 | 303 |
| Msa1035450 | MtrunA17_Chr3g0096651 | 55.172 | 261 | 112 | 2 | 21 | 280 | 27 | 283 | 7.55e-103 | 301 |
| Msa1035450 | MtrunA17_Chr7g0252601 | 51.546 | 291 | 127 | 4 | 1 | 280 | 1 | 288 | 1.98e-101 | 298 |
| Msa1035450 | MtrunA17_Chr6g0461761 | 53.103 | 290 | 122 | 4 | 1 | 279 | 1 | 287 | 2.51e-101 | 298 |
| Msa1035450 | MtrunA17_Chr6g0461731 | 53.546 | 282 | 117 | 4 | 9 | 279 | 32 | 310 | 2.85e-101 | 298 |
| Msa1035450 | MtrunA17_Chr7g0252631 | 55.769 | 260 | 109 | 3 | 24 | 280 | 32 | 288 | 6.93e-101 | 296 |
| Msa1035450 | MtrunA17_Chr7g0252621 | 54.444 | 270 | 113 | 4 | 14 | 280 | 26 | 288 | 1.18e-100 | 296 |
| Msa1035450 | MtrunA17_Chr4g0023961 | 50.177 | 283 | 127 | 5 | 7 | 279 | 10 | 288 | 3.22e-99 | 292 |
| Msa1035450 | MtrunA17_Chr2g0323161 | 50.730 | 274 | 121 | 5 | 16 | 279 | 17 | 286 | 4.04e-98 | 290 |
| Msa1035450 | MtrunA17_Chr4g0054451 | 48.746 | 279 | 134 | 6 | 6 | 279 | 15 | 289 | 2.47e-96 | 285 |
| Msa1035450 | MtrunA17_Chr4g0054431 | 48.921 | 278 | 133 | 6 | 6 | 279 | 15 | 287 | 1.21e-95 | 283 |
| Msa1035450 | MtrunA17_Chr1g0206681 | 48.043 | 281 | 144 | 1 | 3 | 281 | 13 | 293 | 1.61e-95 | 283 |
| Msa1035450 | MtrunA17_Chr1g0206081 | 47.279 | 294 | 139 | 5 | 2 | 281 | 5 | 296 | 4.79e-90 | 269 |
| Msa1035450 | MtrunA17_Chr8g0390201 | 55.612 | 196 | 81 | 3 | 89 | 279 | 15 | 209 | 1.39e-74 | 227 |
| Msa1035450 | MtrunA17_Chr8g0340001 | 45.570 | 237 | 118 | 5 | 48 | 279 | 1 | 231 | 2.76e-68 | 211 |
| Msa1035450 | MtrunA17_Chr4g0072641 | 77.778 | 126 | 14 | 2 | 154 | 279 | 37 | 148 | 3.60e-65 | 201 |
| Msa1035450 | MtrunA17_Chr4g0028221 | 41.509 | 265 | 138 | 7 | 23 | 279 | 49 | 304 | 1.38e-62 | 199 |
| Msa1035450 | MtrunA17_Chr7g0264731 | 40.755 | 265 | 140 | 7 | 23 | 279 | 36 | 291 | 4.75e-62 | 197 |
| Msa1035450 | MtrunA17_Chr1g0180451 | 40.000 | 265 | 142 | 6 | 23 | 279 | 39 | 294 | 1.51e-60 | 194 |
| Msa1035450 | MtrunA17_Chr2g0303861 | 39.310 | 290 | 154 | 11 | 1 | 280 | 1 | 278 | 3.18e-60 | 192 |
| Msa1035450 | MtrunA17_Chr2g0327411 | 40.892 | 269 | 143 | 8 | 19 | 279 | 49 | 309 | 8.94e-60 | 192 |
| Msa1035450 | MtrunA17_Chr8g0375981 | 36.395 | 294 | 168 | 8 | 1 | 279 | 1 | 290 | 3.24e-57 | 186 |
| Msa1035450 | MtrunA17_Chr2g0303721 | 38.062 | 289 | 151 | 10 | 1 | 276 | 1 | 274 | 8.19e-56 | 181 |
| Msa1035450 | MtrunA17_Chr1g0161951 | 40.698 | 258 | 136 | 8 | 32 | 279 | 41 | 291 | 9.51e-55 | 180 |
| Msa1035450 | MtrunA17_Chr7g0235541 | 44.700 | 217 | 106 | 6 | 71 | 281 | 1 | 209 | 2.52e-54 | 175 |
| Msa1035450 | MtrunA17_Chr8g0365231 | 36.364 | 264 | 155 | 7 | 28 | 280 | 50 | 311 | 2.87e-51 | 170 |
| Msa1035450 | MtrunA17_Chr5g0410621 | 35.115 | 262 | 156 | 6 | 32 | 282 | 50 | 308 | 7.10e-50 | 168 |
| Msa1035450 | MtrunA17_Chr8g0382041 | 35.379 | 277 | 148 | 10 | 24 | 282 | 34 | 297 | 1.16e-44 | 154 |
| Msa1035450 | MtrunA17_Chr4g0072631 | 66.667 | 78 | 19 | 2 | 1 | 71 | 1 | 78 | 1.43e-28 | 105 |
| Msa1035450 | MtrunA17_Chr8g0374231 | 45.714 | 105 | 52 | 3 | 180 | 281 | 1 | 103 | 2.86e-24 | 94.4 |
| Msa1035450 | MtrunA17_Chr8g0390181 | 50.000 | 84 | 40 | 1 | 8 | 91 | 12 | 93 | 4.85e-18 | 77.4 |
| Msa1035450 | MtrunA17_Chr8g0350711 | 32.759 | 174 | 109 | 4 | 46 | 217 | 54 | 221 | 1.65e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035450 | AT4G25810.1 | 75.000 | 280 | 67 | 2 | 3 | 279 | 4 | 283 | 5.28e-159 | 444 |
| Msa1035450 | AT5G57560.1 | 71.685 | 279 | 74 | 2 | 6 | 279 | 3 | 281 | 2.75e-153 | 429 |
| Msa1035450 | AT5G57550.1 | 68.662 | 284 | 78 | 2 | 5 | 280 | 3 | 283 | 7.68e-152 | 426 |
| Msa1035450 | AT4G30270.1 | 69.176 | 279 | 72 | 2 | 1 | 279 | 1 | 265 | 4.63e-146 | 410 |
| Msa1035450 | AT3G23730.1 | 66.431 | 283 | 90 | 2 | 3 | 280 | 5 | 287 | 7.51e-142 | 400 |
| Msa1035450 | AT5G57530.1 | 69.202 | 263 | 81 | 0 | 19 | 281 | 22 | 284 | 4.68e-139 | 393 |
| Msa1035450 | AT4G14130.1 | 65.714 | 280 | 95 | 1 | 2 | 280 | 6 | 285 | 1.78e-138 | 392 |
| Msa1035450 | AT5G57540.1 | 68.966 | 261 | 81 | 0 | 21 | 281 | 23 | 283 | 4.21e-138 | 391 |
| Msa1035450 | AT4G25820.1 | 69.173 | 266 | 82 | 0 | 16 | 281 | 22 | 287 | 9.22e-138 | 390 |
| Msa1035450 | AT5G48070.1 | 64.388 | 278 | 92 | 3 | 5 | 279 | 8 | 281 | 9.84e-138 | 390 |
| Msa1035450 | AT2G18800.1 | 64.789 | 284 | 87 | 4 | 9 | 279 | 13 | 296 | 4.10e-134 | 382 |
| Msa1035450 | AT1G65310.2 | 65.385 | 260 | 85 | 2 | 21 | 279 | 48 | 303 | 2.95e-123 | 354 |
| Msa1035450 | AT4G30280.1 | 62.319 | 276 | 97 | 3 | 7 | 279 | 10 | 281 | 4.08e-123 | 353 |
| Msa1035450 | AT1G65310.1 | 65.385 | 260 | 85 | 2 | 21 | 279 | 26 | 281 | 4.75e-123 | 353 |
| Msa1035450 | AT4G30290.1 | 62.545 | 275 | 96 | 3 | 8 | 279 | 6 | 276 | 6.61e-123 | 352 |
| Msa1035450 | AT5G13870.2 | 53.710 | 283 | 121 | 4 | 1 | 280 | 13 | 288 | 5.73e-102 | 300 |
| Msa1035450 | AT5G13870.1 | 53.710 | 283 | 121 | 4 | 1 | 280 | 13 | 288 | 5.73e-102 | 300 |
| Msa1035450 | AT5G13870.3 | 53.710 | 283 | 121 | 4 | 1 | 280 | 13 | 288 | 5.73e-102 | 300 |
| Msa1035450 | AT4G03210.1 | 49.104 | 279 | 134 | 4 | 6 | 280 | 11 | 285 | 1.61e-97 | 288 |
| Msa1035450 | AT2G06850.1 | 51.761 | 284 | 125 | 4 | 6 | 280 | 11 | 291 | 1.89e-97 | 288 |
| Msa1035450 | AT5G65730.1 | 47.619 | 273 | 141 | 2 | 9 | 280 | 20 | 291 | 3.19e-96 | 285 |
| Msa1035450 | AT2G14620.1 | 46.831 | 284 | 147 | 2 | 1 | 281 | 14 | 296 | 1.07e-93 | 279 |
| Msa1035450 | AT4G28850.1 | 48.043 | 281 | 133 | 4 | 10 | 279 | 9 | 287 | 2.75e-93 | 278 |
| Msa1035450 | AT4G37800.1 | 49.438 | 267 | 127 | 5 | 17 | 279 | 27 | 289 | 1.38e-92 | 276 |
| Msa1035450 | AT2G06850.2 | 57.143 | 231 | 93 | 3 | 53 | 280 | 4 | 231 | 1.77e-91 | 271 |
| Msa1035450 | AT4G03210.2 | 53.556 | 239 | 102 | 4 | 46 | 280 | 24 | 257 | 4.90e-91 | 271 |
| Msa1035450 | AT1G11545.1 | 47.569 | 288 | 131 | 7 | 8 | 281 | 20 | 301 | 3.18e-88 | 265 |
| Msa1035450 | AT4G13090.1 | 45.614 | 285 | 147 | 4 | 2 | 280 | 7 | 289 | 1.67e-82 | 250 |
| Msa1035450 | AT2G14620.2 | 50.000 | 230 | 111 | 2 | 55 | 281 | 18 | 246 | 2.74e-80 | 243 |
| Msa1035450 | AT3G25050.1 | 45.946 | 259 | 133 | 4 | 24 | 279 | 35 | 289 | 3.90e-79 | 241 |
| Msa1035450 | AT2G14620.3 | 50.679 | 221 | 105 | 2 | 64 | 281 | 16 | 235 | 2.38e-78 | 238 |
| Msa1035450 | AT4G13080.1 | 43.007 | 286 | 154 | 4 | 1 | 280 | 10 | 292 | 8.39e-78 | 238 |
| Msa1035450 | AT2G36870.1 | 41.887 | 265 | 137 | 6 | 23 | 279 | 42 | 297 | 5.78e-63 | 200 |
| Msa1035450 | AT3G44990.1 | 42.045 | 264 | 136 | 7 | 24 | 279 | 39 | 293 | 1.36e-59 | 191 |
| Msa1035450 | AT1G32170.1 | 34.448 | 299 | 176 | 8 | 1 | 282 | 1 | 296 | 2.21e-54 | 180 |
| Msa1035450 | AT1G10550.1 | 35.385 | 260 | 151 | 5 | 35 | 279 | 52 | 309 | 2.09e-52 | 174 |
| Msa1035450 | AT1G14720.1 | 36.226 | 265 | 157 | 7 | 23 | 279 | 30 | 290 | 1.75e-51 | 172 |
| Msa1035450 | AT2G01850.1 | 33.962 | 265 | 163 | 7 | 23 | 279 | 30 | 290 | 1.57e-47 | 162 |
| Msa1035450 | AT3G48580.1 | 35.581 | 267 | 150 | 9 | 14 | 279 | 28 | 273 | 5.04e-46 | 156 |
| Msa1035450 | AT4G18990.1 | 34.737 | 285 | 147 | 10 | 30 | 282 | 38 | 315 | 2.74e-45 | 156 |
| Msa1035450 | AT3G48580.3 | 35.242 | 227 | 130 | 7 | 54 | 279 | 4 | 214 | 1.31e-39 | 138 |
| Msa1035450 | AT4G18990.2 | 36.408 | 206 | 105 | 7 | 97 | 282 | 42 | 241 | 1.51e-37 | 134 |
| Msa1035450 | AT2G36870.2 | 45.652 | 138 | 65 | 3 | 23 | 152 | 42 | 177 | 7.02e-32 | 116 |
| Msa1035450 | AT3G48580.2 | 31.783 | 258 | 134 | 10 | 23 | 279 | 37 | 253 | 1.37e-29 | 112 |
Find 76 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATATGTGCTTACATAAT+AGG | 0.193887 | 7_1:-71262266 | None:intergenic |
| GTTGATGGATTGTGATATTT+TGG | 0.218711 | 7_1:-71261950 | None:intergenic |
| TGAAATTGACTTTGAATTCT+TGG | 0.239464 | 7_1:+71262425 | Msa1035450:CDS |
| AAGAATGGCAAGGTATTTAT+AGG | 0.244990 | 7_1:-71261927 | None:intergenic |
| TGAGAATCTATTCTAGTCTT+TGG | 0.265403 | 7_1:+71262767 | Msa1035450:CDS |
| ATGTTCTTGAATTCTCTAAT+TGG | 0.274937 | 7_1:-71262706 | None:intergenic |
| AATGCATGCACTGTGTCTTC+TGG | 0.314712 | 7_1:+71262880 | Msa1035450:CDS |
| GTCTTTGGAATGCTGATGAT+TGG | 0.342081 | 7_1:+71262782 | Msa1035450:CDS |
| GAAATAATTTACCATAGAAA+TGG | 0.363559 | 7_1:-71263176 | None:intergenic |
| TTCACACCTATTCCATCCTC+TGG | 0.371800 | 7_1:+71262553 | Msa1035450:CDS |
| GAAATTGACTTTGAATTCTT+GGG | 0.375587 | 7_1:+71262426 | Msa1035450:CDS |
| AGAATGGCAAGGTATTTATA+GGG | 0.386663 | 7_1:-71261926 | None:intergenic |
| AAAATGCCATTGGAAGCTAA+TGG | 0.394542 | 7_1:-71261997 | None:intergenic |
| ATTAGCATTGAAGTTTCTAT+AGG | 0.401233 | 7_1:-71262860 | None:intergenic |
| CTATAAAGAATCCATTTCTA+TGG | 0.407346 | 7_1:+71263165 | Msa1035450:three_prime_UTR |
| CTTGACAAATCCTCTGGCTC+TGG | 0.413692 | 7_1:+71262157 | Msa1035450:CDS |
| TGCTTGGTTCTCAGAGGAGT+TGG | 0.433098 | 7_1:+71262939 | Msa1035450:CDS |
| AAGGCCCTGAGGAAATCTTT+TGG | 0.436526 | 7_1:-71263031 | None:intergenic |
| AGACTAGAATAGATTCTCAT+TGG | 0.441045 | 7_1:-71262763 | None:intergenic |
| ATGCAGCTTAAACTCGTTCC+TGG | 0.444564 | 7_1:+71262220 | Msa1035450:CDS |
| TTGTCTCTTGACAAATCCTC+TGG | 0.457727 | 7_1:+71262151 | Msa1035450:CDS |
| TAGAATAGATTCTCATTGGT+TGG | 0.468992 | 7_1:-71262759 | None:intergenic |
| TCTTTGGAATGCTGATGATT+GGG | 0.473720 | 7_1:+71262783 | Msa1035450:CDS |
| CTCGTTCCTGGCAACTCTGC+TGG | 0.477190 | 7_1:+71262232 | Msa1035450:CDS |
| GTGAGAAAGTGAGATGTTGA+TGG | 0.477554 | 7_1:-71261965 | None:intergenic |
| GTACTTACGCAATGCGTTGT+GGG | 0.480368 | 7_1:-71262578 | None:intergenic |
| CACAGTCTAATAAGAATGCT+TGG | 0.481977 | 7_1:+71262923 | Msa1035450:CDS |
| ACAGTTGCAATTGCCTCTGC+TGG | 0.489680 | 7_1:+71262052 | Msa1035450:CDS |
| TGATACCAAAAGATTTCCTC+AGG | 0.490646 | 7_1:+71263026 | Msa1035450:CDS |
| TTCAAGAACATGGAATCAAA+TGG | 0.495147 | 7_1:+71262718 | Msa1035450:CDS |
| TGGGTTCCAGAGGATGGAAT+AGG | 0.498523 | 7_1:-71262559 | None:intergenic |
| ATTAATTCAGCTATCATCAA+AGG | 0.499625 | 7_1:+71262389 | Msa1035450:intron |
| GAGAGCAACAATTCTACCTA+TGG | 0.502278 | 7_1:+71262511 | Msa1035450:CDS |
| CTTAACAAGTCCACCTCTTG+TGG | 0.502433 | 7_1:-71262806 | None:intergenic |
| GTGGACTTGTTAAGACAGAT+TGG | 0.508499 | 7_1:+71262815 | Msa1035450:CDS |
| ACATTGGTGTGTAGAATGTA+CGG | 0.517352 | 7_1:-71262465 | None:intergenic |
| GCAACTCTTGAAAATGCCAT+TGG | 0.521914 | 7_1:-71262007 | None:intergenic |
| ATCAAGACTTTGATATAACA+TGG | 0.525397 | 7_1:+71262083 | Msa1035450:CDS |
| GGAAGCAGTGAAAGGAGCAT+TGG | 0.527846 | 7_1:-71262839 | None:intergenic |
| ACAGTACCAGCAGAGTTGCC+AGG | 0.530020 | 7_1:-71262238 | None:intergenic |
| ATCATCAAAGGGAGGTGCAT+GGG | 0.532090 | 7_1:+71262401 | Msa1035450:CDS |
| TTAATTCAGCTATCATCAAA+GGG | 0.532906 | 7_1:+71262390 | Msa1035450:intron |
| AATGTGTTTAGCCAAGGAAA+AGG | 0.538333 | 7_1:+71262483 | Msa1035450:CDS |
| GCGTTGTGGGTTCCAGAGGA+TGG | 0.545929 | 7_1:-71262565 | None:intergenic |
| AGTACTTACGCAATGCGTTG+TGG | 0.545984 | 7_1:-71262579 | None:intergenic |
| CTGCAGTTGGGTCAAACCAT+AGG | 0.546848 | 7_1:-71262527 | None:intergenic |
| CAAGAGACAAAGTAAGAAGT+TGG | 0.551315 | 7_1:-71262138 | None:intergenic |
| TAGGTGTGAAAATCTGCAGT+TGG | 0.552711 | 7_1:-71262540 | None:intergenic |
| AGGGCCTTCCTCAAGAATGC+AGG | 0.553967 | 7_1:+71263046 | Msa1035450:CDS |
| CTGTAGAGATCAAAATGACT+AGG | 0.554171 | 7_1:-71262033 | None:intergenic |
| AAATACAATACGAAGGGTTG+AGG | 0.556496 | 7_1:-71263100 | None:intergenic |
| AGGTGTGAAAATCTGCAGTT+GGG | 0.562198 | 7_1:-71262539 | None:intergenic |
| TTTCTATAGGAAGCAGTGAA+AGG | 0.568107 | 7_1:-71262847 | None:intergenic |
| TCAAGACTTTGATATAACAT+GGG | 0.571188 | 7_1:+71262084 | Msa1035450:CDS |
| TTTGATATAACATGGGGAGA+TGG | 0.574885 | 7_1:+71262091 | Msa1035450:CDS |
| CAAGTCATGAGAGGCTCAAG+TGG | 0.575997 | 7_1:+71262968 | Msa1035450:CDS |
| TAAACCATCCTGCATTCTTG+AGG | 0.578265 | 7_1:-71263054 | None:intergenic |
| AATTAGAGAATTCAAGAACA+TGG | 0.587989 | 7_1:+71262708 | Msa1035450:CDS |
| GATGATTGGGCCACAAGAGG+TGG | 0.592351 | 7_1:+71262796 | Msa1035450:CDS |
| CAATGCGTTGTGGGTTCCAG+AGG | 0.599167 | 7_1:-71262569 | None:intergenic |
| CCATCCTGCATTCTTGAGGA+AGG | 0.601607 | 7_1:-71263050 | None:intergenic |
| TATCATCAAAGGGAGGTGCA+TGG | 0.604599 | 7_1:+71262400 | Msa1035450:CDS |
| CATTGGTGTGTAGAATGTAC+GGG | 0.607920 | 7_1:-71262464 | None:intergenic |
| CACACCAATGTGTTTAGCCA+AGG | 0.612143 | 7_1:+71262477 | Msa1035450:CDS |
| GGATTGAAAACCAGAGCCAG+AGG | 0.618155 | 7_1:-71262167 | None:intergenic |
| CAAGACTTTGATATAACATG+GGG | 0.627432 | 7_1:+71262085 | Msa1035450:CDS |
| GAATTCTTGGGAAATTTGAG+TGG | 0.630242 | 7_1:+71262438 | Msa1035450:CDS |
| GCTGATGATTGGGCCACAAG+AGG | 0.655452 | 7_1:+71262793 | Msa1035450:CDS |
| CATTCTTGAGGAAGGCCCTG+AGG | 0.663273 | 7_1:-71263042 | None:intergenic |
| TAAGAATGCTTGGTTCTCAG+AGG | 0.671213 | 7_1:+71262933 | Msa1035450:CDS |
| CGTGCTAAAATACTCAACAA+TGG | 0.672548 | 7_1:+71262115 | Msa1035450:CDS |
| AAGTCATGAGAGGCTCAAGT+GGG | 0.675575 | 7_1:+71262969 | Msa1035450:CDS |
| TGGATTCTACAAGTCATGAG+AGG | 0.679866 | 7_1:+71262959 | Msa1035450:CDS |
| CCTTCCTCAAGAATGCAGGA+TGG | 0.683725 | 7_1:+71263050 | Msa1035450:CDS |
| GATACCAAAAGATTTCCTCA+GGG | 0.691000 | 7_1:+71263027 | Msa1035450:CDS |
| ATTCAGCTATCATCAAAGGG+AGG | 0.711975 | 7_1:+71262393 | Msa1035450:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTATAATATTTTTGTACA+AGG | + | chr7_1:71262299-71262318 | Msa1035450:intron | 15.0% |
| !!! | TAAAAGTTCTTTTAACTTAT+TGG | + | chr7_1:71262351-71262370 | Msa1035450:intron | 15.0% |
| !!! | TTTTTTTTAATTACTTGTGT+CGG | + | chr7_1:71262623-71262642 | Msa1035450:intron | 15.0% |
| !!! | CTTTATAATATTTTTGTACA+AGG | + | chr7_1:71262299-71262318 | Msa1035450:intron | 15.0% |
| !!! | TAAAAGTTCTTTTAACTTAT+TGG | + | chr7_1:71262351-71262370 | Msa1035450:intron | 15.0% |
| !!! | TTTTTTTTAATTACTTGTGT+CGG | + | chr7_1:71262623-71262642 | Msa1035450:intron | 15.0% |
| !!! | TCCAAAAATGAATATCTTTT+TGG | + | chr7_1:71262187-71262206 | Msa1035450:CDS | 20.0% |
| !! | TTACAAAAATACAATACGAA+GGG | - | chr7_1:71263109-71263128 | None:intergenic | 20.0% |
| !! | ATTACAAAAATACAATACGA+AGG | - | chr7_1:71263110-71263129 | None:intergenic | 20.0% |
| !!! | TCCAAAAATGAATATCTTTT+TGG | + | chr7_1:71262187-71262206 | Msa1035450:CDS | 20.0% |
| !! | TTACAAAAATACAATACGAA+GGG | - | chr7_1:71263109-71263128 | None:intergenic | 20.0% |
| !! | ATTACAAAAATACAATACGA+AGG | - | chr7_1:71263110-71263129 | None:intergenic | 20.0% |
| !!! | ATTGTGATATTTTGGAAGAA+TGG | - | chr7_1:71261945-71261964 | None:intergenic | 25.0% |
| ! | ATCAAGACTTTGATATAACA+TGG | + | chr7_1:71262083-71262102 | Msa1035450:CDS | 25.0% |
| ! | TCAAGACTTTGATATAACAT+GGG | + | chr7_1:71262084-71262103 | Msa1035450:CDS | 25.0% |
| !! | GCCAAAAAGATATTCATTTT+TGG | - | chr7_1:71262191-71262210 | None:intergenic | 25.0% |
| ! | TGAATATGTGCTTACATAAT+AGG | - | chr7_1:71262269-71262288 | None:intergenic | 25.0% |
| ! | ATTAATTCAGCTATCATCAA+AGG | + | chr7_1:71262389-71262408 | Msa1035450:intron | 25.0% |
| ! | TTAATTCAGCTATCATCAAA+GGG | + | chr7_1:71262390-71262409 | Msa1035450:intron | 25.0% |
| !! | TGAAATTGACTTTGAATTCT+TGG | + | chr7_1:71262425-71262444 | Msa1035450:CDS | 25.0% |
| !! | GAAATTGACTTTGAATTCTT+GGG | + | chr7_1:71262426-71262445 | Msa1035450:CDS | 25.0% |
| !!! | TTTATTTTTCAGTTTCTCTG+TGG | + | chr7_1:71262675-71262694 | Msa1035450:intron | 25.0% |
| ! | ATGTTCTTGAATTCTCTAAT+TGG | - | chr7_1:71262709-71262728 | None:intergenic | 25.0% |
| ! | AATTAGAGAATTCAAGAACA+TGG | + | chr7_1:71262708-71262727 | Msa1035450:CDS | 25.0% |
| !! | ATTAGCATTGAAGTTTCTAT+AGG | - | chr7_1:71262863-71262882 | None:intergenic | 25.0% |
| ! | CTATAAAGAATCCATTTCTA+TGG | + | chr7_1:71263165-71263184 | Msa1035450:three_prime_UTR | 25.0% |
| !!! | ATTGTGATATTTTGGAAGAA+TGG | - | chr7_1:71261945-71261964 | None:intergenic | 25.0% |
| ! | ATCAAGACTTTGATATAACA+TGG | + | chr7_1:71262083-71262102 | Msa1035450:CDS | 25.0% |
| ! | TCAAGACTTTGATATAACAT+GGG | + | chr7_1:71262084-71262103 | Msa1035450:CDS | 25.0% |
| !! | GCCAAAAAGATATTCATTTT+TGG | - | chr7_1:71262191-71262210 | None:intergenic | 25.0% |
| ! | TGAATATGTGCTTACATAAT+AGG | - | chr7_1:71262269-71262288 | None:intergenic | 25.0% |
| ! | ATTAATTCAGCTATCATCAA+AGG | + | chr7_1:71262389-71262408 | Msa1035450:intron | 25.0% |
| ! | TTAATTCAGCTATCATCAAA+GGG | + | chr7_1:71262390-71262409 | Msa1035450:intron | 25.0% |
| !! | TGAAATTGACTTTGAATTCT+TGG | + | chr7_1:71262425-71262444 | Msa1035450:CDS | 25.0% |
| !! | GAAATTGACTTTGAATTCTT+GGG | + | chr7_1:71262426-71262445 | Msa1035450:CDS | 25.0% |
| !!! | TTTATTTTTCAGTTTCTCTG+TGG | + | chr7_1:71262675-71262694 | Msa1035450:intron | 25.0% |
| ! | ATGTTCTTGAATTCTCTAAT+TGG | - | chr7_1:71262709-71262728 | None:intergenic | 25.0% |
| ! | AATTAGAGAATTCAAGAACA+TGG | + | chr7_1:71262708-71262727 | Msa1035450:CDS | 25.0% |
| !! | ATTAGCATTGAAGTTTCTAT+AGG | - | chr7_1:71262863-71262882 | None:intergenic | 25.0% |
| ! | CTATAAAGAATCCATTTCTA+TGG | + | chr7_1:71263165-71263184 | Msa1035450:three_prime_UTR | 25.0% |
| !!! | GTTGATGGATTGTGATATTT+TGG | - | chr7_1:71261953-71261972 | None:intergenic | 30.0% |
| ! | AAAAATCCATTAGCTTCCAA+TGG | + | chr7_1:71261991-71262010 | Msa1035450:exon | 30.0% |
| CAAGACTTTGATATAACATG+GGG | + | chr7_1:71262085-71262104 | Msa1035450:CDS | 30.0% | |
| TTCAAGAACATGGAATCAAA+TGG | + | chr7_1:71262718-71262737 | Msa1035450:CDS | 30.0% | |
| !!! | ATTCTCATTGGTTGGTTTTT+GGG | - | chr7_1:71262754-71262773 | None:intergenic | 30.0% |
| TAGAATAGATTCTCATTGGT+TGG | - | chr7_1:71262762-71262781 | None:intergenic | 30.0% | |
| AGACTAGAATAGATTCTCAT+TGG | - | chr7_1:71262766-71262785 | None:intergenic | 30.0% | |
| ! | TGAGAATCTATTCTAGTCTT+TGG | + | chr7_1:71262767-71262786 | Msa1035450:CDS | 30.0% |
| !!! | GTTGATGGATTGTGATATTT+TGG | - | chr7_1:71261953-71261972 | None:intergenic | 30.0% |
| ! | AAAAATCCATTAGCTTCCAA+TGG | + | chr7_1:71261991-71262010 | Msa1035450:exon | 30.0% |
| CAAGACTTTGATATAACATG+GGG | + | chr7_1:71262085-71262104 | Msa1035450:CDS | 30.0% | |
| TTCAAGAACATGGAATCAAA+TGG | + | chr7_1:71262718-71262737 | Msa1035450:CDS | 30.0% | |
| !!! | ATTCTCATTGGTTGGTTTTT+GGG | - | chr7_1:71262754-71262773 | None:intergenic | 30.0% |
| TAGAATAGATTCTCATTGGT+TGG | - | chr7_1:71262762-71262781 | None:intergenic | 30.0% | |
| AGACTAGAATAGATTCTCAT+TGG | - | chr7_1:71262766-71262785 | None:intergenic | 30.0% | |
| ! | TGAGAATCTATTCTAGTCTT+TGG | + | chr7_1:71262767-71262786 | Msa1035450:CDS | 30.0% |
| !! | GATATTTTGGAAGAATGGCA+AGG | - | chr7_1:71261940-71261959 | None:intergenic | 35.0% |
| AAAATGCCATTGGAAGCTAA+TGG | - | chr7_1:71262000-71262019 | None:intergenic | 35.0% | |
| CTGTAGAGATCAAAATGACT+AGG | - | chr7_1:71262036-71262055 | None:intergenic | 35.0% | |
| TTGATAAAAATTGCCAGCAG+AGG | - | chr7_1:71262068-71262087 | None:intergenic | 35.0% | |
| TTTGATATAACATGGGGAGA+TGG | + | chr7_1:71262091-71262110 | Msa1035450:CDS | 35.0% | |
| CGTGCTAAAATACTCAACAA+TGG | + | chr7_1:71262115-71262134 | Msa1035450:CDS | 35.0% | |
| CAAGAGACAAAGTAAGAAGT+TGG | - | chr7_1:71262141-71262160 | None:intergenic | 35.0% | |
| GAATTCTTGGGAAATTTGAG+TGG | + | chr7_1:71262438-71262457 | Msa1035450:CDS | 35.0% | |
| ACATTGGTGTGTAGAATGTA+CGG | - | chr7_1:71262468-71262487 | None:intergenic | 35.0% | |
| ! | TTTTCCTTGGCTAAACACAT+TGG | - | chr7_1:71262484-71262503 | None:intergenic | 35.0% |
| AATGTGTTTAGCCAAGGAAA+AGG | + | chr7_1:71262483-71262502 | Msa1035450:CDS | 35.0% | |
| !! | TTTTTCAGTTTCTCTGTGGA+TGG | + | chr7_1:71262679-71262698 | Msa1035450:intron | 35.0% |
| !!! | ATTGGTTGGTTTTTGGGAAA+TGG | - | chr7_1:71262748-71262767 | None:intergenic | 35.0% |
| !!! | GATTCTCATTGGTTGGTTTT+TGG | - | chr7_1:71262755-71262774 | None:intergenic | 35.0% |
| !! | TCTTTGGAATGCTGATGATT+GGG | + | chr7_1:71262783-71262802 | Msa1035450:CDS | 35.0% |
| TTTCTATAGGAAGCAGTGAA+AGG | - | chr7_1:71262850-71262869 | None:intergenic | 35.0% | |
| CACAGTCTAATAAGAATGCT+TGG | + | chr7_1:71262923-71262942 | Msa1035450:CDS | 35.0% | |
| TGATACCAAAAGATTTCCTC+AGG | + | chr7_1:71263026-71263045 | Msa1035450:CDS | 35.0% | |
| GATACCAAAAGATTTCCTCA+GGG | + | chr7_1:71263027-71263046 | Msa1035450:CDS | 35.0% | |
| AAATACAATACGAAGGGTTG+AGG | - | chr7_1:71263103-71263122 | None:intergenic | 35.0% | |
| !! | GATATTTTGGAAGAATGGCA+AGG | - | chr7_1:71261940-71261959 | None:intergenic | 35.0% |
| AAAATGCCATTGGAAGCTAA+TGG | - | chr7_1:71262000-71262019 | None:intergenic | 35.0% | |
| CTGTAGAGATCAAAATGACT+AGG | - | chr7_1:71262036-71262055 | None:intergenic | 35.0% | |
| TTGATAAAAATTGCCAGCAG+AGG | - | chr7_1:71262068-71262087 | None:intergenic | 35.0% | |
| TTTGATATAACATGGGGAGA+TGG | + | chr7_1:71262091-71262110 | Msa1035450:CDS | 35.0% | |
| CGTGCTAAAATACTCAACAA+TGG | + | chr7_1:71262115-71262134 | Msa1035450:CDS | 35.0% | |
| CAAGAGACAAAGTAAGAAGT+TGG | - | chr7_1:71262141-71262160 | None:intergenic | 35.0% | |
| GAATTCTTGGGAAATTTGAG+TGG | + | chr7_1:71262438-71262457 | Msa1035450:CDS | 35.0% | |
| ACATTGGTGTGTAGAATGTA+CGG | - | chr7_1:71262468-71262487 | None:intergenic | 35.0% | |
| ! | TTTTCCTTGGCTAAACACAT+TGG | - | chr7_1:71262484-71262503 | None:intergenic | 35.0% |
| AATGTGTTTAGCCAAGGAAA+AGG | + | chr7_1:71262483-71262502 | Msa1035450:CDS | 35.0% | |
| !! | TTTTTCAGTTTCTCTGTGGA+TGG | + | chr7_1:71262679-71262698 | Msa1035450:intron | 35.0% |
| !!! | ATTGGTTGGTTTTTGGGAAA+TGG | - | chr7_1:71262748-71262767 | None:intergenic | 35.0% |
| !!! | GATTCTCATTGGTTGGTTTT+TGG | - | chr7_1:71262755-71262774 | None:intergenic | 35.0% |
| !! | TCTTTGGAATGCTGATGATT+GGG | + | chr7_1:71262783-71262802 | Msa1035450:CDS | 35.0% |
| TTTCTATAGGAAGCAGTGAA+AGG | - | chr7_1:71262850-71262869 | None:intergenic | 35.0% | |
| CACAGTCTAATAAGAATGCT+TGG | + | chr7_1:71262923-71262942 | Msa1035450:CDS | 35.0% | |
| TGATACCAAAAGATTTCCTC+AGG | + | chr7_1:71263026-71263045 | Msa1035450:CDS | 35.0% | |
| GATACCAAAAGATTTCCTCA+GGG | + | chr7_1:71263027-71263046 | Msa1035450:CDS | 35.0% | |
| AAATACAATACGAAGGGTTG+AGG | - | chr7_1:71263103-71263122 | None:intergenic | 35.0% | |
| GTGAGAAAGTGAGATGTTGA+TGG | - | chr7_1:71261968-71261987 | None:intergenic | 40.0% | |
| GCAACTCTTGAAAATGCCAT+TGG | - | chr7_1:71262010-71262029 | None:intergenic | 40.0% | |
| TTGTCTCTTGACAAATCCTC+TGG | + | chr7_1:71262151-71262170 | Msa1035450:CDS | 40.0% | |
| ATTCAGCTATCATCAAAGGG+AGG | + | chr7_1:71262393-71262412 | Msa1035450:intron | 40.0% | |
| CATTGGTGTGTAGAATGTAC+GGG | - | chr7_1:71262467-71262486 | None:intergenic | 40.0% | |
| GAGAGCAACAATTCTACCTA+TGG | + | chr7_1:71262511-71262530 | Msa1035450:CDS | 40.0% | |
| AGGTGTGAAAATCTGCAGTT+GGG | - | chr7_1:71262542-71262561 | None:intergenic | 40.0% | |
| TAGGTGTGAAAATCTGCAGT+TGG | - | chr7_1:71262543-71262562 | None:intergenic | 40.0% | |
| !! | GTCTTTGGAATGCTGATGAT+TGG | + | chr7_1:71262782-71262801 | Msa1035450:CDS | 40.0% |
| !! | GTGGACTTGTTAAGACAGAT+TGG | + | chr7_1:71262815-71262834 | Msa1035450:CDS | 40.0% |
| ! | TAAGAATGCTTGGTTCTCAG+AGG | + | chr7_1:71262933-71262952 | Msa1035450:CDS | 40.0% |
| TGGATTCTACAAGTCATGAG+AGG | + | chr7_1:71262959-71262978 | Msa1035450:CDS | 40.0% | |
| TAAACCATCCTGCATTCTTG+AGG | - | chr7_1:71263057-71263076 | None:intergenic | 40.0% | |
| GTGAGAAAGTGAGATGTTGA+TGG | - | chr7_1:71261968-71261987 | None:intergenic | 40.0% | |
| GCAACTCTTGAAAATGCCAT+TGG | - | chr7_1:71262010-71262029 | None:intergenic | 40.0% | |
| TTGTCTCTTGACAAATCCTC+TGG | + | chr7_1:71262151-71262170 | Msa1035450:CDS | 40.0% | |
| ATTCAGCTATCATCAAAGGG+AGG | + | chr7_1:71262393-71262412 | Msa1035450:intron | 40.0% | |
| CATTGGTGTGTAGAATGTAC+GGG | - | chr7_1:71262467-71262486 | None:intergenic | 40.0% | |
| GAGAGCAACAATTCTACCTA+TGG | + | chr7_1:71262511-71262530 | Msa1035450:CDS | 40.0% | |
| AGGTGTGAAAATCTGCAGTT+GGG | - | chr7_1:71262542-71262561 | None:intergenic | 40.0% | |
| TAGGTGTGAAAATCTGCAGT+TGG | - | chr7_1:71262543-71262562 | None:intergenic | 40.0% | |
| !! | GTCTTTGGAATGCTGATGAT+TGG | + | chr7_1:71262782-71262801 | Msa1035450:CDS | 40.0% |
| !! | GTGGACTTGTTAAGACAGAT+TGG | + | chr7_1:71262815-71262834 | Msa1035450:CDS | 40.0% |
| ! | TAAGAATGCTTGGTTCTCAG+AGG | + | chr7_1:71262933-71262952 | Msa1035450:CDS | 40.0% |
| TGGATTCTACAAGTCATGAG+AGG | + | chr7_1:71262959-71262978 | Msa1035450:CDS | 40.0% | |
| TAAACCATCCTGCATTCTTG+AGG | - | chr7_1:71263057-71263076 | None:intergenic | 40.0% | |
| ATGCAGCTTAAACTCGTTCC+TGG | + | chr7_1:71262220-71262239 | Msa1035450:CDS | 45.0% | |
| ! | TATCATCAAAGGGAGGTGCA+TGG | + | chr7_1:71262400-71262419 | Msa1035450:CDS | 45.0% |
| ! | ATCATCAAAGGGAGGTGCAT+GGG | + | chr7_1:71262401-71262420 | Msa1035450:CDS | 45.0% |
| CACACCAATGTGTTTAGCCA+AGG | + | chr7_1:71262477-71262496 | Msa1035450:CDS | 45.0% | |
| ! | GCTCTCTGTTACCTTTTCCT+TGG | - | chr7_1:71262497-71262516 | None:intergenic | 45.0% |
| TTCACACCTATTCCATCCTC+TGG | + | chr7_1:71262553-71262572 | Msa1035450:CDS | 45.0% | |
| GTACTTACGCAATGCGTTGT+GGG | - | chr7_1:71262581-71262600 | None:intergenic | 45.0% | |
| AGTACTTACGCAATGCGTTG+TGG | - | chr7_1:71262582-71262601 | None:intergenic | 45.0% | |
| CTTAACAAGTCCACCTCTTG+TGG | - | chr7_1:71262809-71262828 | None:intergenic | 45.0% | |
| AATGCATGCACTGTGTCTTC+TGG | + | chr7_1:71262880-71262899 | Msa1035450:CDS | 45.0% | |
| AAGTCATGAGAGGCTCAAGT+GGG | + | chr7_1:71262969-71262988 | Msa1035450:CDS | 45.0% | |
| ! | AAGGCCCTGAGGAAATCTTT+TGG | - | chr7_1:71263034-71263053 | None:intergenic | 45.0% |
| ATGCAGCTTAAACTCGTTCC+TGG | + | chr7_1:71262220-71262239 | Msa1035450:CDS | 45.0% | |
| ! | TATCATCAAAGGGAGGTGCA+TGG | + | chr7_1:71262400-71262419 | Msa1035450:CDS | 45.0% |
| ! | ATCATCAAAGGGAGGTGCAT+GGG | + | chr7_1:71262401-71262420 | Msa1035450:CDS | 45.0% |
| CACACCAATGTGTTTAGCCA+AGG | + | chr7_1:71262477-71262496 | Msa1035450:CDS | 45.0% | |
| ! | GCTCTCTGTTACCTTTTCCT+TGG | - | chr7_1:71262497-71262516 | None:intergenic | 45.0% |
| TTCACACCTATTCCATCCTC+TGG | + | chr7_1:71262553-71262572 | Msa1035450:CDS | 45.0% | |
| GTACTTACGCAATGCGTTGT+GGG | - | chr7_1:71262581-71262600 | None:intergenic | 45.0% | |
| AGTACTTACGCAATGCGTTG+TGG | - | chr7_1:71262582-71262601 | None:intergenic | 45.0% | |
| CTTAACAAGTCCACCTCTTG+TGG | - | chr7_1:71262809-71262828 | None:intergenic | 45.0% | |
| AATGCATGCACTGTGTCTTC+TGG | + | chr7_1:71262880-71262899 | Msa1035450:CDS | 45.0% | |
| AAGTCATGAGAGGCTCAAGT+GGG | + | chr7_1:71262969-71262988 | Msa1035450:CDS | 45.0% | |
| ! | AAGGCCCTGAGGAAATCTTT+TGG | - | chr7_1:71263034-71263053 | None:intergenic | 45.0% |
| !!! | ATTAAAAAAAATCAATTTTA+AGG | - | chr7_1:71262614-71262633 | None:intergenic | 5.0% |
| !!! | ATTAAAAAAAATCAATTTTA+AGG | - | chr7_1:71262614-71262633 | None:intergenic | 5.0% |
| ACAGTTGCAATTGCCTCTGC+TGG | + | chr7_1:71262052-71262071 | Msa1035450:CDS | 50.0% | |
| ! | CTTGACAAATCCTCTGGCTC+TGG | + | chr7_1:71262157-71262176 | Msa1035450:CDS | 50.0% |
| GGATTGAAAACCAGAGCCAG+AGG | - | chr7_1:71262170-71262189 | None:intergenic | 50.0% | |
| CTGCAGTTGGGTCAAACCAT+AGG | - | chr7_1:71262530-71262549 | None:intergenic | 50.0% | |
| TGGGTTCCAGAGGATGGAAT+AGG | - | chr7_1:71262562-71262581 | None:intergenic | 50.0% | |
| ! | GGAAGCAGTGAAAGGAGCAT+TGG | - | chr7_1:71262842-71262861 | None:intergenic | 50.0% |
| ! | TGCTTGGTTCTCAGAGGAGT+TGG | + | chr7_1:71262939-71262958 | Msa1035450:CDS | 50.0% |
| CAAGTCATGAGAGGCTCAAG+TGG | + | chr7_1:71262968-71262987 | Msa1035450:CDS | 50.0% | |
| CCATCCTGCATTCTTGAGGA+AGG | - | chr7_1:71263053-71263072 | None:intergenic | 50.0% | |
| CCTTCCTCAAGAATGCAGGA+TGG | + | chr7_1:71263050-71263069 | Msa1035450:CDS | 50.0% | |
| ACAGTTGCAATTGCCTCTGC+TGG | + | chr7_1:71262052-71262071 | Msa1035450:CDS | 50.0% | |
| ! | CTTGACAAATCCTCTGGCTC+TGG | + | chr7_1:71262157-71262176 | Msa1035450:CDS | 50.0% |
| GGATTGAAAACCAGAGCCAG+AGG | - | chr7_1:71262170-71262189 | None:intergenic | 50.0% | |
| CTGCAGTTGGGTCAAACCAT+AGG | - | chr7_1:71262530-71262549 | None:intergenic | 50.0% | |
| TGGGTTCCAGAGGATGGAAT+AGG | - | chr7_1:71262562-71262581 | None:intergenic | 50.0% | |
| ! | GGAAGCAGTGAAAGGAGCAT+TGG | - | chr7_1:71262842-71262861 | None:intergenic | 50.0% |
| ! | TGCTTGGTTCTCAGAGGAGT+TGG | + | chr7_1:71262939-71262958 | Msa1035450:CDS | 50.0% |
| CAAGTCATGAGAGGCTCAAG+TGG | + | chr7_1:71262968-71262987 | Msa1035450:CDS | 50.0% | |
| CCATCCTGCATTCTTGAGGA+AGG | - | chr7_1:71263053-71263072 | None:intergenic | 50.0% | |
| CCTTCCTCAAGAATGCAGGA+TGG | + | chr7_1:71263050-71263069 | Msa1035450:CDS | 50.0% | |
| ACAGTACCAGCAGAGTTGCC+AGG | - | chr7_1:71262241-71262260 | None:intergenic | 55.0% | |
| CAATGCGTTGTGGGTTCCAG+AGG | - | chr7_1:71262572-71262591 | None:intergenic | 55.0% | |
| GCTGATGATTGGGCCACAAG+AGG | + | chr7_1:71262793-71262812 | Msa1035450:CDS | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | + | chr7_1:71262796-71262815 | Msa1035450:CDS | 55.0% | |
| CATTCTTGAGGAAGGCCCTG+AGG | - | chr7_1:71263045-71263064 | None:intergenic | 55.0% | |
| AGGGCCTTCCTCAAGAATGC+AGG | + | chr7_1:71263046-71263065 | Msa1035450:CDS | 55.0% | |
| ACAGTACCAGCAGAGTTGCC+AGG | - | chr7_1:71262241-71262260 | None:intergenic | 55.0% | |
| CAATGCGTTGTGGGTTCCAG+AGG | - | chr7_1:71262572-71262591 | None:intergenic | 55.0% | |
| GCTGATGATTGGGCCACAAG+AGG | + | chr7_1:71262793-71262812 | Msa1035450:CDS | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | + | chr7_1:71262796-71262815 | Msa1035450:CDS | 55.0% | |
| CATTCTTGAGGAAGGCCCTG+AGG | - | chr7_1:71263045-71263064 | None:intergenic | 55.0% | |
| AGGGCCTTCCTCAAGAATGC+AGG | + | chr7_1:71263046-71263065 | Msa1035450:CDS | 55.0% | |
| CTCGTTCCTGGCAACTCTGC+TGG | + | chr7_1:71262232-71262251 | Msa1035450:CDS | 60.0% | |
| GCGTTGTGGGTTCCAGAGGA+TGG | - | chr7_1:71262568-71262587 | None:intergenic | 60.0% | |
| CTCGTTCCTGGCAACTCTGC+TGG | + | chr7_1:71262232-71262251 | Msa1035450:CDS | 60.0% | |
| GCGTTGTGGGTTCCAGAGGA+TGG | - | chr7_1:71262568-71262587 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 71261929 | 71263197 | 71261929 | ID=Msa1035450;Name=Msa1035450 |
| chr7_1 | mRNA | 71261929 | 71263197 | 71261929 | ID=Msa1035450-mRNA-1;Parent=Msa1035450;Name=Msa1035450-mRNA-1;_AED=0.02;_eAED=0.02;_QI=81|1|1|1|1|1|3|120|282 |
| chr7_1 | exon | 71261929 | 71262273 | 71261929 | ID=Msa1035450-mRNA-1:exon:17166;Parent=Msa1035450-mRNA-1 |
| chr7_1 | exon | 71262399 | 71262592 | 71262399 | ID=Msa1035450-mRNA-1:exon:17167;Parent=Msa1035450-mRNA-1 |
| chr7_1 | exon | 71262687 | 71263197 | 71262687 | ID=Msa1035450-mRNA-1:exon:17168;Parent=Msa1035450-mRNA-1 |
| chr7_1 | five_prime_UTR | 71261929 | 71262009 | 71261929 | ID=Msa1035450-mRNA-1:five_prime_utr;Parent=Msa1035450-mRNA-1 |
| chr7_1 | CDS | 71262010 | 71262273 | 71262010 | ID=Msa1035450-mRNA-1:cds;Parent=Msa1035450-mRNA-1 |
| chr7_1 | CDS | 71262399 | 71262592 | 71262399 | ID=Msa1035450-mRNA-1:cds;Parent=Msa1035450-mRNA-1 |
| chr7_1 | CDS | 71262687 | 71263077 | 71262687 | ID=Msa1035450-mRNA-1:cds;Parent=Msa1035450-mRNA-1 |
| chr7_1 | three_prime_UTR | 71263078 | 71263197 | 71263078 | ID=Msa1035450-mRNA-1:three_prime_utr;Parent=Msa1035450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
