Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124970 | XP_013450093.1 | 98.777 | 327 | 4 | 0 | 1 | 327 | 1 | 327 | 0.0 | 670 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124970 | sp|Q9FMY5|U2AFB_ARATH | 64.026 | 303 | 83 | 5 | 1 | 298 | 1 | 282 | 2.74e-114 | 335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124970 | A0A072U424 | 98.777 | 327 | 4 | 0 | 1 | 327 | 1 | 327 | 0.0 | 670 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094600 | Msa1124970 | 0.825070 | 5.726777e-54 | -8.615850e-47 |
| Msa0709390 | Msa1124970 | 0.991790 | 1.488248e-189 | -8.615850e-47 |
| Msa1041840 | Msa1124970 | 0.990769 | 3.104642e-184 | -8.615850e-47 |
| Msa1124970 | Msa1167350 | 0.986776 | 6.248756e-168 | -8.615850e-47 |
| Msa1124970 | Msa1423040 | 0.998797 | 5.510002e-277 | -8.615850e-47 |
| Msa0880030 | Msa1124970 | 0.921843 | 2.124342e-88 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124970 | MtrunA17_Chr7g0265751 | 98.777 | 327 | 4 | 0 | 1 | 327 | 1 | 327 | 0.0 | 670 |
| Msa1124970 | MtrunA17_Chr2g0320801 | 60.377 | 318 | 87 | 4 | 1 | 305 | 1 | 292 | 8.14e-119 | 345 |
| Msa1124970 | MtrunA17_Chr1g0162821 | 72.362 | 199 | 41 | 2 | 1 | 199 | 1 | 185 | 1.26e-106 | 312 |
| Msa1124970 | MtrunA17_Chr2g0276901 | 37.755 | 98 | 58 | 1 | 92 | 186 | 28 | 125 | 5.28e-18 | 84.7 |
| Msa1124970 | MtrunA17_Chr2g0276891 | 55.102 | 49 | 22 | 0 | 9 | 57 | 184 | 232 | 2.88e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124970 | AT5G42820.1 | 64.026 | 303 | 83 | 5 | 1 | 298 | 1 | 282 | 2.79e-115 | 335 |
| Msa1124970 | AT5G42820.2 | 64.026 | 303 | 83 | 5 | 1 | 298 | 1 | 282 | 2.79e-115 | 335 |
| Msa1124970 | AT1G27650.1 | 65.461 | 304 | 74 | 7 | 1 | 292 | 1 | 285 | 5.07e-113 | 330 |
| Msa1124970 | AT1G27650.2 | 59.843 | 254 | 71 | 7 | 51 | 292 | 1 | 235 | 1.92e-73 | 227 |
| Msa1124970 | AT1G10320.2 | 34.426 | 183 | 97 | 3 | 9 | 186 | 228 | 392 | 1.51e-34 | 134 |
| Msa1124970 | AT1G10320.1 | 34.426 | 183 | 97 | 3 | 9 | 186 | 237 | 401 | 1.69e-34 | 134 |
| Msa1124970 | AT3G44785.1 | 65.753 | 73 | 24 | 1 | 1 | 73 | 1 | 72 | 3.90e-29 | 107 |
Find 123 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATATTTCATTTCTGTATT+TGG | 0.102491 | 7_3:-76239462 | Msa1124970:three_prime_UTR |
| ATGCTCCGCCATCGATTATT+AGG | 0.132506 | 7_3:+76241924 | None:intergenic |
| TAAGAGATGTGAAACAATTT+TGG | 0.157960 | 7_3:-76239356 | Msa1124970:three_prime_UTR |
| AAGTGTTCTTGGAGTTTATC+AGG | 0.235787 | 7_3:+76241661 | None:intergenic |
| TATGAGGGGCGTTCGTATTC+TGG | 0.248763 | 7_3:-76239953 | Msa1124970:CDS |
| CATTCAGAAGATCCACAAAA+TGG | 0.251545 | 7_3:+76239236 | None:intergenic |
| CTTGAATATTTGTGACAATT+TGG | 0.267256 | 7_3:-76241503 | Msa1124970:CDS |
| GATTTGAGGAAGCGATTATT+TGG | 0.276417 | 7_3:-76240043 | Msa1124970:CDS |
| TTATCAGGGTCAAGAGATTC+AGG | 0.286148 | 7_3:+76241676 | None:intergenic |
| TGCCGAGGACTACGGCTTCT+TGG | 0.303158 | 7_3:+76239875 | None:intergenic |
| TACATACATCGAAGTGTTCT+TGG | 0.310686 | 7_3:+76241650 | None:intergenic |
| TCGTATTCTGGCCGTGGTTC+TGG | 0.312884 | 7_3:-76239941 | Msa1124970:CDS |
| TTACTTGCAGAAATTATTAC+AGG | 0.313162 | 7_3:+76239600 | None:intergenic |
| AATAATTTCTGCAAGTAATC+TGG | 0.317375 | 7_3:-76239595 | Msa1124970:three_prime_UTR |
| GAGAAGGAAGTTGGAGATTC+TGG | 0.338699 | 7_3:-76239740 | Msa1124970:CDS |
| TGAGGTTGTTGAGGTTGATT+AGG | 0.344172 | 7_3:+76241718 | None:intergenic |
| TTACAGGGTCTTCTCACTTT+GGG | 0.346064 | 7_3:+76239616 | None:intergenic |
| GAGCATTTAGCATCGATATT+CGG | 0.354185 | 7_3:-76241907 | Msa1124970:CDS |
| CTTTCTCTTTCTCCTCTGAT+AGG | 0.355688 | 7_3:+76239803 | None:intergenic |
| TGAGGTGGTTGAGGAGGTTG+AGG | 0.362652 | 7_3:+76241700 | None:intergenic |
| TGCTCCGCCATCGATTATTA+GGG | 0.367053 | 7_3:+76241925 | None:intergenic |
| CTTTCTCCTCTGATAGGATT+CGG | 0.367164 | 7_3:+76239809 | None:intergenic |
| TGGTTCTGGTAGAAGGGATT+TGG | 0.369893 | 7_3:-76239927 | Msa1124970:CDS |
| CCCTCATAGTTACGATTTCT+CGG | 0.370767 | 7_3:+76239968 | None:intergenic |
| CTGGCCGTGGTTCTGGTAGA+AGG | 0.372740 | 7_3:-76239934 | Msa1124970:CDS |
| GATTCAGGTTGAGGTGGTTG+AGG | 0.376296 | 7_3:+76241691 | None:intergenic |
| ATAAAGTTAAGGTTCATATC+AGG | 0.384960 | 7_3:+76241751 | None:intergenic |
| TTTGAGGAGCTGAGCAAGTA+TGG | 0.394906 | 7_3:-76241538 | Msa1124970:CDS |
| GAGTAGGATTGATAAAGTTA+AGG | 0.396234 | 7_3:+76241740 | None:intergenic |
| GGCTTCTTGGCCTTCTACCA+TGG | 0.400878 | 7_3:+76239888 | None:intergenic |
| CTAGAATAGAACAATGGAAC+AGG | 0.401571 | 7_3:-76239763 | Msa1124970:CDS |
| TGTTGACTTCTCTCCTGTTA+CGG | 0.406173 | 7_3:-76240251 | Msa1124970:CDS |
| GCTTCTCGAAAATCCGTAAC+AGG | 0.408045 | 7_3:+76240238 | None:intergenic |
| ATTACAGGGTCTTCTCACTT+TGG | 0.418323 | 7_3:+76239615 | None:intergenic |
| AAAACTACAGCCAACTCAAT+AGG | 0.421667 | 7_3:+76239557 | None:intergenic |
| TGACAATTTGGCTGATCATA+TGG | 0.424836 | 7_3:-76241491 | Msa1124970:intron |
| AGTAGGACTAATGGTGGGTT+TGG | 0.429071 | 7_3:+76241801 | None:intergenic |
| AACATAAATAAATCTCGAAA+GGG | 0.429853 | 7_3:-76241969 | Msa1124970:five_prime_UTR |
| CTCATGGCTCCCATGGTAGA+AGG | 0.441236 | 7_3:-76239898 | Msa1124970:CDS |
| AATCACTATAAAATAGTTAA+CGG | 0.444979 | 7_3:-76239288 | Msa1124970:three_prime_UTR |
| TGTTGAGGTTGATTAGGAGT+AGG | 0.451883 | 7_3:+76241724 | None:intergenic |
| CCTTTGATTTCAGAGATTTG+AGG | 0.452267 | 7_3:-76240057 | Msa1124970:intron |
| GATTATTTGGAAGAAGTAGT+AGG | 0.454782 | 7_3:-76240030 | Msa1124970:CDS |
| CCTCATAGTTACGATTTCTC+GGG | 0.458427 | 7_3:+76239969 | None:intergenic |
| TGCATCTAAAGAAGATTAGC+AGG | 0.461797 | 7_3:-76240159 | Msa1124970:intron |
| AGATTACCTGGGTGAAATAG+AGG | 0.463565 | 7_3:-76239411 | Msa1124970:three_prime_UTR |
| CCCGAGAAATCGTAACTATG+AGG | 0.480351 | 7_3:-76239969 | Msa1124970:CDS |
| TCAGGTTGAGGTGGTTGAGG+AGG | 0.483616 | 7_3:+76241694 | None:intergenic |
| AAAGAGAAAGTAGTGTAGAA+AGG | 0.483749 | 7_3:-76239790 | Msa1124970:CDS |
| TGGAACAGGGAGAAGGAAGT+TGG | 0.485919 | 7_3:-76239749 | Msa1124970:CDS |
| ATTCAGAAGATCCACAAAAT+GGG | 0.489931 | 7_3:+76239237 | None:intergenic |
| GGAGAGAAGTCAACAATGAT+TGG | 0.494146 | 7_3:+76240259 | None:intergenic |
| GGACTCCTGTCTCTTCCCAT+TGG | 0.497688 | 7_3:+76239830 | None:intergenic |
| AAACTCTGTTGGAGATTACC+TGG | 0.498335 | 7_3:-76239423 | Msa1124970:three_prime_UTR |
| GCTCCGATCTTGAAGTAGAA+TGG | 0.500982 | 7_3:+76241859 | None:intergenic |
| CTCATAGTTACGATTTCTCG+GGG | 0.504601 | 7_3:+76239970 | None:intergenic |
| CTGGTAGAAGGGATTTGGAC+AGG | 0.507028 | 7_3:-76239922 | Msa1124970:CDS |
| GGCCAAGAAGCCGTAGTCCT+CGG | 0.507965 | 7_3:-76239877 | Msa1124970:CDS |
| TGAGGAGGTTGAGGTTGTTG+AGG | 0.510776 | 7_3:+76241709 | None:intergenic |
| GCTTCTTGGCCTTCTACCAT+GGG | 0.511138 | 7_3:+76239889 | None:intergenic |
| GGGTCAAGAGATTCAGGTTG+AGG | 0.514083 | 7_3:+76241682 | None:intergenic |
| GGGCGTTCGTATTCTGGCCG+TGG | 0.515780 | 7_3:-76239947 | Msa1124970:CDS |
| TTGGAAGAAGTAGTAGGCGT+TGG | 0.517691 | 7_3:-76240024 | Msa1124970:CDS |
| GACAGGTCTCATGGCTCCCA+TGG | 0.524520 | 7_3:-76239905 | Msa1124970:CDS |
| TTAGTTTGCACCTATTGAGT+TGG | 0.528104 | 7_3:-76239567 | Msa1124970:three_prime_UTR |
| GAGAACAAGAGTAGGACTAA+TGG | 0.530039 | 7_3:+76241792 | None:intergenic |
| AGGCGGAGTAGAAGTCCAAT+GGG | 0.531064 | 7_3:-76239845 | Msa1124970:CDS |
| ATCAGGACGTTGATACATGT+TGG | 0.531267 | 7_3:+76241768 | None:intergenic |
| GAAGTCCAATGGGAAGAGAC+AGG | 0.531891 | 7_3:-76239835 | Msa1124970:CDS |
| TGTATATGTTCAGTATAAAG+AGG | 0.534599 | 7_3:-76241367 | Msa1124970:CDS |
| ACCGTAGTGGAAGCAGAAGC+CGG | 0.541010 | 7_3:-76239997 | Msa1124970:CDS |
| CAACATAAATAAATCTCGAA+AGG | 0.544906 | 7_3:-76241970 | Msa1124970:five_prime_UTR |
| TGTTCGATGGTAAACTCTGT+TGG | 0.545340 | 7_3:-76239434 | Msa1124970:three_prime_UTR |
| TCCGGCTTCTGCTTCCACTA+CGG | 0.545385 | 7_3:+76239996 | None:intergenic |
| TGGCCGTGGTTCTGGTAGAA+GGG | 0.546507 | 7_3:-76239933 | Msa1124970:CDS |
| CCGAGAAATCGTAACTATGA+GGG | 0.550258 | 7_3:-76239968 | Msa1124970:CDS |
| AATAGTTAACGGAAGAAGTG+AGG | 0.560146 | 7_3:-76239277 | Msa1124970:three_prime_UTR |
| AGGGATTTGGACAGGTCTCA+TGG | 0.560557 | 7_3:-76239914 | Msa1124970:CDS |
| AGTGTTCTTGGAGTTTATCA+GGG | 0.562952 | 7_3:+76241662 | None:intergenic |
| AACAATGATTATGAAGAGGC+GGG | 0.563713 | 7_3:-76239698 | Msa1124970:CDS |
| TTCCTCTATGCCGAGGACTA+CGG | 0.567765 | 7_3:+76239867 | None:intergenic |
| AATGCTCTTATGAATCTCAC+TGG | 0.570244 | 7_3:-76241330 | Msa1124970:CDS |
| TGTCCATTCTACTTCAAGAT+CGG | 0.570630 | 7_3:-76241862 | Msa1124970:CDS |
| AAGGCGGAGTAGAAGTCCAA+TGG | 0.574467 | 7_3:-76239846 | Msa1124970:CDS |
| AGCCGTAGTCCTCGGCATAG+AGG | 0.581691 | 7_3:-76239869 | Msa1124970:CDS |
| AGAACAATGGAACAGGGAGA+AGG | 0.596602 | 7_3:-76239756 | Msa1124970:CDS |
| ATTTGCAACAGAACAAAGGA+AGG | 0.601935 | 7_3:+76239308 | None:intergenic |
| TCATAAGAGCATTAGCAGCA+TGG | 0.602037 | 7_3:+76241340 | None:intergenic |
| GTAGTCCTCGGCATAGAGGA+AGG | 0.603594 | 7_3:-76239865 | Msa1124970:CDS |
| GAAAGGGGTTCGTGAGAGAG+TGG | 0.603769 | 7_3:-76241953 | Msa1124970:five_prime_UTR |
| TAACAATGATTATGAAGAGG+CGG | 0.605105 | 7_3:-76239699 | Msa1124970:CDS |
| AGAAGTCAACAATGATTGGT+CGG | 0.606403 | 7_3:+76240263 | None:intergenic |
| CATAGTTACGATTTCTCGGG+GGG | 0.607441 | 7_3:+76239972 | None:intergenic |
| AGTGATTTGCAACAGAACAA+AGG | 0.611402 | 7_3:+76239304 | None:intergenic |
| GATTACCTGGGTGAAATAGA+GGG | 0.614308 | 7_3:-76239410 | Msa1124970:three_prime_UTR |
| GGCGAAACCCTAATAATCGA+TGG | 0.614459 | 7_3:-76241932 | Msa1124970:exon |
| AACAAGAGTAGGACTAATGG+TGG | 0.614682 | 7_3:+76241795 | None:intergenic |
| TCAAGAGATTCAGGTTGAGG+TGG | 0.615585 | 7_3:+76241685 | None:intergenic |
| AAGATCGGAGCTTGTAGACA+TGG | 0.618937 | 7_3:-76241847 | Msa1124970:CDS |
| CTCCGCCTTCCTCTATGCCG+AGG | 0.622022 | 7_3:+76239860 | None:intergenic |
| GTATTTGGATGAATGTTCGA+TGG | 0.623654 | 7_3:-76239447 | Msa1124970:three_prime_UTR |
| AGTTAACGGAAGAAGTGAGG+AGG | 0.623894 | 7_3:-76239274 | Msa1124970:three_prime_UTR |
| GAGTAACAATGATTATGAAG+AGG | 0.626539 | 7_3:-76239702 | Msa1124970:CDS |
| AGTTGGAGATTCTGGTAACA+AGG | 0.630652 | 7_3:-76239732 | Msa1124970:CDS |
| AGGAGTCCGAATCCTATCAG+AGG | 0.630679 | 7_3:-76239815 | Msa1124970:CDS |
| AACTCTGTTGGAGATTACCT+GGG | 0.633510 | 7_3:-76239422 | Msa1124970:three_prime_UTR |
| CGAGAAATCGTAACTATGAG+GGG | 0.636005 | 7_3:-76239967 | Msa1124970:CDS |
| GAAGAGAATGTATGCAATCG+AGG | 0.636366 | 7_3:-76240199 | Msa1124970:CDS |
| ACATAAATAAATCTCGAAAG+GGG | 0.642552 | 7_3:-76241968 | Msa1124970:five_prime_UTR |
| TACTTGCAGAAATTATTACA+GGG | 0.643592 | 7_3:+76239601 | None:intergenic |
| ATGTTGGAGAGAACAAGAGT+AGG | 0.650220 | 7_3:+76241784 | None:intergenic |
| TCATAGTTACGATTTCTCGG+GGG | 0.654148 | 7_3:+76239971 | None:intergenic |
| GGAGAGCTAGAATAGAACAA+TGG | 0.656515 | 7_3:-76239769 | Msa1124970:CDS |
| CGGTTCCCTCTATTTCACCC+AGG | 0.673223 | 7_3:+76239405 | None:intergenic |
| GCATAGTTGAAATTCAAACA+CGG | 0.675622 | 7_3:+76239385 | None:intergenic |
| AGGCGTTGGAATGACCGTAG+TGG | 0.684717 | 7_3:-76240010 | Msa1124970:CDS |
| TAGAATAGAACAATGGAACA+GGG | 0.687714 | 7_3:-76239762 | Msa1124970:CDS |
| AATCCCTTCTACCAGAACCA+CGG | 0.694334 | 7_3:+76239930 | None:intergenic |
| ACAAGAGTAGGACTAATGGT+GGG | 0.704223 | 7_3:+76241796 | None:intergenic |
| GAAACCCTAATAATCGATGG+CGG | 0.712302 | 7_3:-76241929 | Msa1124970:exon |
| GAGAATGTATGCAATCGAGG+TGG | 0.723621 | 7_3:-76240196 | Msa1124970:CDS |
| GTCCTCGGCATAGAGGAAGG+CGG | 0.728288 | 7_3:-76239862 | Msa1124970:CDS |
| TGGTATGAAGACGAGAACAG+CGG | 0.740225 | 7_3:+76241821 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAAAATAAAAAATTGAA+GGG | + | chr7_3:76239631-76239650 | None:intergenic | 10.0% |
| !! | AAATCAAAATAAAAAATTGA+AGG | + | chr7_3:76239632-76239651 | None:intergenic | 10.0% |
| !! | AACAAAAATCATAAAAATTA+GGG | + | chr7_3:76239835-76239854 | None:intergenic | 10.0% |
| !! | AAACAAAAATCATAAAAATT+AGG | + | chr7_3:76239836-76239855 | None:intergenic | 10.0% |
| !!! | TATGATTTTTGTTTTTTTAT+AGG | - | chr7_3:76239842-76239861 | Msa1124970:CDS | 10.0% |
| !! | TATATATATATATGATGATT+TGG | - | chr7_3:76240014-76240033 | Msa1124970:CDS | 10.0% |
| !! | ATCAAAATAAAAAATTGAAG+GGG | + | chr7_3:76239630-76239649 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTTTTTTATAGGT+TGG | - | chr7_3:76239846-76239865 | Msa1124970:CDS | 15.0% |
| !! | AAAAAGAAAATTACAATTGT+GGG | + | chr7_3:76240721-76240740 | None:intergenic | 15.0% |
| !! | CAAATATTAATGATTATTTC+AGG | - | chr7_3:76240822-76240841 | Msa1124970:intron | 15.0% |
| !! | AATCACTATAAAATAGTTAA+CGG | - | chr7_3:76241951-76241970 | Msa1124970:five_prime_UTR | 15.0% |
| !! | AACATAAATAAATCTCGAAA+GGG | - | chr7_3:76239270-76239289 | Msa1124970:three_prime_UTR | 20.0% |
| !!! | TTTTTATGAAGATCTATTTG+AGG | - | chr7_3:76239685-76239704 | Msa1124970:CDS | 20.0% |
| !! | TTCATAAATCAAAAAGAGAA+AGG | + | chr7_3:76239788-76239807 | None:intergenic | 20.0% |
| !! | TTTAGATTGAGATATTCAAT+TGG | - | chr7_3:76240459-76240478 | Msa1124970:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTCCTTCC+TGG | - | chr7_3:76240693-76240712 | Msa1124970:intron | 20.0% |
| !! | GAAAAAGAAAATTACAATTG+TGG | + | chr7_3:76240722-76240741 | None:intergenic | 20.0% |
| !!! | TATTAATGATTATTTCAGGT+AGG | - | chr7_3:76240826-76240845 | Msa1124970:intron | 20.0% |
| !!! | AAAAATTGAAAAGCATGAAT+AGG | + | chr7_3:76241123-76241142 | None:intergenic | 20.0% |
| ! | CAACATAAATAAATCTCGAA+AGG | - | chr7_3:76239269-76239288 | Msa1124970:three_prime_UTR | 25.0% |
| ! | ACATAAATAAATCTCGAAAG+GGG | - | chr7_3:76239271-76239290 | Msa1124970:three_prime_UTR | 25.0% |
| ! | ATAAAGTTAAGGTTCATATC+AGG | + | chr7_3:76239491-76239510 | None:intergenic | 25.0% |
| ! | CTTGAATATTTGTGACAATT+TGG | - | chr7_3:76239736-76239755 | Msa1124970:CDS | 25.0% |
| ! | TGTATATGTTCAGTATAAAG+AGG | - | chr7_3:76239872-76239891 | Msa1124970:CDS | 25.0% |
| !!! | TATATATGATGATTTGGTTG+TGG | - | chr7_3:76240020-76240039 | Msa1124970:CDS | 25.0% |
| ! | TTATTCAATTGTTTGTGCTT+TGG | - | chr7_3:76240056-76240075 | Msa1124970:intron | 25.0% |
| ! | ACATGACATATATTGAAACA+TGG | + | chr7_3:76240120-76240139 | None:intergenic | 25.0% |
| !!! | CACTTGATTTATTTTTGTGT+TGG | + | chr7_3:76240191-76240210 | None:intergenic | 25.0% |
| ! | ACTAAAGGCAATATTCATAT+TGG | - | chr7_3:76240420-76240439 | Msa1124970:intron | 25.0% |
| ! | ATTGAGATATTCAATTGGTT+TGG | - | chr7_3:76240464-76240483 | Msa1124970:intron | 25.0% |
| !! | TTATCTGATGGAATGATTTT+TGG | - | chr7_3:76240562-76240581 | Msa1124970:intron | 25.0% |
| ! | TACTTGCAGAAATTATTACA+GGG | + | chr7_3:76241641-76241660 | None:intergenic | 25.0% |
| ! | TTACTTGCAGAAATTATTAC+AGG | + | chr7_3:76241642-76241661 | None:intergenic | 25.0% |
| ! | AATAATTTCTGCAAGTAATC+TGG | - | chr7_3:76241644-76241663 | Msa1124970:intron | 25.0% |
| ! | GGATATTTCATTTCTGTATT+TGG | - | chr7_3:76241777-76241796 | Msa1124970:CDS | 25.0% |
| !! | TAAGAGATGTGAAACAATTT+TGG | - | chr7_3:76241883-76241902 | Msa1124970:CDS | 25.0% |
| GAGTAGGATTGATAAAGTTA+AGG | + | chr7_3:76239502-76239521 | None:intergenic | 30.0% | |
| !!! | AGGTTCTGAATTTTGTAGTT+AGG | - | chr7_3:76239944-76239963 | Msa1124970:CDS | 30.0% |
| !!! | GGTTCTGAATTTTGTAGTTA+GGG | - | chr7_3:76239945-76239964 | Msa1124970:CDS | 30.0% |
| ! | TAATGAGTTGGATCGAAATT+TGG | - | chr7_3:76240289-76240308 | Msa1124970:intron | 30.0% |
| TGGTACATGATAGAACATTA+TGG | - | chr7_3:76240309-76240328 | Msa1124970:intron | 30.0% | |
| TGAATCCTTTGTGTAACTAA+AGG | - | chr7_3:76240405-76240424 | Msa1124970:intron | 30.0% | |
| TATTGCCTTTAGTTACACAA+AGG | + | chr7_3:76240413-76240432 | None:intergenic | 30.0% | |
| CAATAAAAGTGGGTACAATA+AGG | + | chr7_3:76240509-76240528 | None:intergenic | 30.0% | |
| !! | CTTATTGTACCCACTTTTAT+TGG | - | chr7_3:76240507-76240526 | Msa1124970:intron | 30.0% |
| !! | TGATGGAATGATTTTTGGAT+AGG | - | chr7_3:76240567-76240586 | Msa1124970:intron | 30.0% |
| !! | AATCTCTGAAATCAAAGGTA+AGG | + | chr7_3:76241180-76241199 | None:intergenic | 30.0% |
| GATTATTTGGAAGAAGTAGT+AGG | - | chr7_3:76241209-76241228 | Msa1124970:intron | 30.0% | |
| AAAGAGAAAGTAGTGTAGAA+AGG | - | chr7_3:76241449-76241468 | Msa1124970:intron | 30.0% | |
| TAGAATAGAACAATGGAACA+GGG | - | chr7_3:76241477-76241496 | Msa1124970:intron | 30.0% | |
| GAGTAACAATGATTATGAAG+AGG | - | chr7_3:76241537-76241556 | Msa1124970:CDS | 30.0% | |
| TAACAATGATTATGAAGAGG+CGG | - | chr7_3:76241540-76241559 | Msa1124970:CDS | 30.0% | |
| GCATAGTTGAAATTCAAACA+CGG | + | chr7_3:76241857-76241876 | None:intergenic | 30.0% | |
| ! | AACAATTTTGGATCGAATCA+TGG | - | chr7_3:76241895-76241914 | Msa1124970:CDS | 30.0% |
| !! | GAGCATTTAGCATCGATATT+CGG | - | chr7_3:76239332-76239351 | Msa1124970:three_prime_UTR | 35.0% |
| TGTCCATTCTACTTCAAGAT+CGG | - | chr7_3:76239377-76239396 | Msa1124970:three_prime_UTR | 35.0% | |
| AGTGTTCTTGGAGTTTATCA+GGG | + | chr7_3:76239580-76239599 | None:intergenic | 35.0% | |
| AAGTGTTCTTGGAGTTTATC+AGG | + | chr7_3:76239581-76239600 | None:intergenic | 35.0% | |
| ! | TACATACATCGAAGTGTTCT+TGG | + | chr7_3:76239592-76239611 | None:intergenic | 35.0% |
| TGACAATTTGGCTGATCATA+TGG | - | chr7_3:76239748-76239767 | Msa1124970:CDS | 35.0% | |
| AATGCTCTTATGAATCTCAC+TGG | - | chr7_3:76239909-76239928 | Msa1124970:CDS | 35.0% | |
| ! | CTCACTGGAAGATTTTATTC+AGG | - | chr7_3:76239924-76239943 | Msa1124970:CDS | 35.0% |
| TATATACGTTGAAACACGAG+TGG | + | chr7_3:76240156-76240175 | None:intergenic | 35.0% | |
| AGACTAGAGAGGATATGATT+AGG | - | chr7_3:76240248-76240267 | Msa1124970:CDS | 35.0% | |
| TAAGAAGGGCCAATAAAAGT+GGG | + | chr7_3:76240519-76240538 | None:intergenic | 35.0% | |
| ACTCCCAAAATGAGTAAGAA+GGG | + | chr7_3:76240533-76240552 | None:intergenic | 35.0% | |
| ATTCCATCAGATAAAGCTCA+AGG | + | chr7_3:76240556-76240575 | None:intergenic | 35.0% | |
| AAATTACAATTGTGGGTACC+AGG | + | chr7_3:76240714-76240733 | None:intergenic | 35.0% | |
| AAGCAATGATAGACAATGCA+CGG | + | chr7_3:76240902-76240921 | None:intergenic | 35.0% | |
| TTGCTACTGACATTGTGATT+TGG | - | chr7_3:76240937-76240956 | Msa1124970:intron | 35.0% | |
| AGAAGTCAACAATGATTGGT+CGG | + | chr7_3:76240979-76240998 | None:intergenic | 35.0% | |
| !! | ATTTTCGAGAAGCTACTTGT+AGG | - | chr7_3:76241011-76241030 | Msa1124970:intron | 35.0% |
| TGCATCTAAAGAAGATTAGC+AGG | - | chr7_3:76241080-76241099 | Msa1124970:intron | 35.0% | |
| ! | AAAAGCATGAATAGGCTATG+TGG | + | chr7_3:76241115-76241134 | None:intergenic | 35.0% |
| !! | CCTCAAATCTCTGAAATCAA+AGG | + | chr7_3:76241185-76241204 | None:intergenic | 35.0% |
| ! | CCTTTGATTTCAGAGATTTG+AGG | - | chr7_3:76241182-76241201 | Msa1124970:intron | 35.0% |
| GATTTGAGGAAGCGATTATT+TGG | - | chr7_3:76241196-76241215 | Msa1124970:intron | 35.0% | |
| CTAGAATAGAACAATGGAAC+AGG | - | chr7_3:76241476-76241495 | Msa1124970:intron | 35.0% | |
| AACAATGATTATGAAGAGGC+GGG | - | chr7_3:76241541-76241560 | Msa1124970:CDS | 35.0% | |
| !! | TTAGTTTGCACCTATTGAGT+TGG | - | chr7_3:76241672-76241691 | Msa1124970:CDS | 35.0% |
| AAAACTACAGCCAACTCAAT+AGG | + | chr7_3:76241685-76241704 | None:intergenic | 35.0% | |
| !! | GTTTTGATATAGTTCAGCAG+TGG | - | chr7_3:76241756-76241775 | Msa1124970:CDS | 35.0% |
| GTATTTGGATGAATGTTCGA+TGG | - | chr7_3:76241792-76241811 | Msa1124970:CDS | 35.0% | |
| ATTTGCAACAGAACAAAGGA+AGG | + | chr7_3:76241934-76241953 | None:intergenic | 35.0% | |
| ! | AGTGATTTGCAACAGAACAA+AGG | + | chr7_3:76241938-76241957 | None:intergenic | 35.0% |
| AATAGTTAACGGAAGAAGTG+AGG | - | chr7_3:76241962-76241981 | Msa1124970:five_prime_UTR | 35.0% | |
| ! | AGAAAATCTGACCCATTTTG+TGG | - | chr7_3:76241991-76242010 | Msa1124970:five_prime_UTR | 35.0% |
| GAAACCCTAATAATCGATGG+CGG | - | chr7_3:76239310-76239329 | Msa1124970:three_prime_UTR | 40.0% | |
| ACAAGAGTAGGACTAATGGT+GGG | + | chr7_3:76239446-76239465 | None:intergenic | 40.0% | |
| AACAAGAGTAGGACTAATGG+TGG | + | chr7_3:76239447-76239466 | None:intergenic | 40.0% | |
| GAGAACAAGAGTAGGACTAA+TGG | + | chr7_3:76239450-76239469 | None:intergenic | 40.0% | |
| ATGTTGGAGAGAACAAGAGT+AGG | + | chr7_3:76239458-76239477 | None:intergenic | 40.0% | |
| ATCAGGACGTTGATACATGT+TGG | + | chr7_3:76239474-76239493 | None:intergenic | 40.0% | |
| ! | TGTTGAGGTTGATTAGGAGT+AGG | + | chr7_3:76239518-76239537 | None:intergenic | 40.0% |
| ! | TGAGGTTGTTGAGGTTGATT+AGG | + | chr7_3:76239524-76239543 | None:intergenic | 40.0% |
| TTATCAGGGTCAAGAGATTC+AGG | + | chr7_3:76239566-76239585 | None:intergenic | 40.0% | |
| !! | TCATAAGAGCATTAGCAGCA+TGG | + | chr7_3:76239902-76239921 | None:intergenic | 40.0% |
| ! | GATGCGTGATCTGATAATGA+TGG | - | chr7_3:76240092-76240111 | Msa1124970:intron | 40.0% |
| AATCAAGTGTAGCAAAGACG+AGG | - | chr7_3:76240202-76240221 | Msa1124970:CDS | 40.0% | |
| ATCAAGTGTAGCAAAGACGA+GGG | - | chr7_3:76240203-76240222 | Msa1124970:CDS | 40.0% | |
| GGGTGTTAGCATTTGATGTA+TGG | - | chr7_3:76240223-76240242 | Msa1124970:CDS | 40.0% | |
| GATGTATGGTAAGACTAGAG+AGG | - | chr7_3:76240237-76240256 | Msa1124970:CDS | 40.0% | |
| AGATCCAGAGACTAATGAGT+TGG | - | chr7_3:76240277-76240296 | Msa1124970:intron | 40.0% | |
| !! | ACTAAATGGGGTTGGCTAAA+TGG | + | chr7_3:76240346-76240365 | None:intergenic | 40.0% |
| ATTTAGCCAACCCCATTTAG+TGG | - | chr7_3:76240345-76240364 | Msa1124970:intron | 40.0% | |
| TTTAGCCAACCCCATTTAGT+GGG | - | chr7_3:76240346-76240365 | Msa1124970:intron | 40.0% | |
| AAACCTTACCCCACTAAATG+GGG | + | chr7_3:76240358-76240377 | None:intergenic | 40.0% | |
| CAAACCTTACCCCACTAAAT+GGG | + | chr7_3:76240359-76240378 | None:intergenic | 40.0% | |
| GTAAGAAGGGCCAATAAAAG+TGG | + | chr7_3:76240520-76240539 | None:intergenic | 40.0% | |
| ! | TTGGCCCTTCTTACTCATTT+TGG | - | chr7_3:76240526-76240545 | Msa1124970:intron | 40.0% |
| ! | TGGCCCTTCTTACTCATTTT+GGG | - | chr7_3:76240527-76240546 | Msa1124970:intron | 40.0% |
| GACTCCCAAAATGAGTAAGA+AGG | + | chr7_3:76240534-76240553 | None:intergenic | 40.0% | |
| ! | AGTCCTTGAGCTTTATCTGA+TGG | - | chr7_3:76240550-76240569 | Msa1124970:intron | 40.0% |
| ACAAGCAGTAAGGACAACAT+TGG | + | chr7_3:76240652-76240671 | None:intergenic | 40.0% | |
| TGCAAACAACACAAGCAGTA+AGG | + | chr7_3:76240662-76240681 | None:intergenic | 40.0% | |
| CTACCGAGTTCAGTATTGTT+TGG | - | chr7_3:76240759-76240778 | Msa1124970:intron | 40.0% | |
| CAGCCAAACAATACTGAACT+CGG | + | chr7_3:76240765-76240784 | None:intergenic | 40.0% | |
| AGTATTGTTTGGCTGAGATG+AGG | - | chr7_3:76240770-76240789 | Msa1124970:intron | 40.0% | |
| GATTTGGCTGTCATTCTTCT+AGG | - | chr7_3:76240953-76240972 | Msa1124970:intron | 40.0% | |
| GGAGAGAAGTCAACAATGAT+TGG | + | chr7_3:76240983-76241002 | None:intergenic | 40.0% | |
| !! | TGTTGACTTCTCTCCTGTTA+CGG | - | chr7_3:76240988-76241007 | Msa1124970:intron | 40.0% |
| GAAGAGAATGTATGCAATCG+AGG | - | chr7_3:76241040-76241059 | Msa1124970:intron | 40.0% | |
| TCATAGTTACGATTTCTCGG+GGG | + | chr7_3:76241271-76241290 | None:intergenic | 40.0% | |
| CTCATAGTTACGATTTCTCG+GGG | + | chr7_3:76241272-76241291 | None:intergenic | 40.0% | |
| CCTCATAGTTACGATTTCTC+GGG | + | chr7_3:76241273-76241292 | None:intergenic | 40.0% | |
| CCCTCATAGTTACGATTTCT+CGG | + | chr7_3:76241274-76241293 | None:intergenic | 40.0% | |
| CCGAGAAATCGTAACTATGA+GGG | - | chr7_3:76241271-76241290 | Msa1124970:intron | 40.0% | |
| CGAGAAATCGTAACTATGAG+GGG | - | chr7_3:76241272-76241291 | Msa1124970:intron | 40.0% | |
| CTTTCTCCTCTGATAGGATT+CGG | + | chr7_3:76241433-76241452 | None:intergenic | 40.0% | |
| CTTTCTCTTTCTCCTCTGAT+AGG | + | chr7_3:76241439-76241458 | None:intergenic | 40.0% | |
| GGAGAGCTAGAATAGAACAA+TGG | - | chr7_3:76241470-76241489 | Msa1124970:intron | 40.0% | |
| AGTTGGAGATTCTGGTAACA+AGG | - | chr7_3:76241507-76241526 | Msa1124970:CDS | 40.0% | |
| TTACAGGGTCTTCTCACTTT+GGG | + | chr7_3:76241626-76241645 | None:intergenic | 40.0% | |
| ATTACAGGGTCTTCTCACTT+TGG | + | chr7_3:76241627-76241646 | None:intergenic | 40.0% | |
| TGTTCGATGGTAAACTCTGT+TGG | - | chr7_3:76241805-76241824 | Msa1124970:CDS | 40.0% | |
| AAACTCTGTTGGAGATTACC+TGG | - | chr7_3:76241816-76241835 | Msa1124970:CDS | 40.0% | |
| AACTCTGTTGGAGATTACCT+GGG | - | chr7_3:76241817-76241836 | Msa1124970:CDS | 40.0% | |
| AGATTACCTGGGTGAAATAG+AGG | - | chr7_3:76241828-76241847 | Msa1124970:CDS | 40.0% | |
| GATTACCTGGGTGAAATAGA+GGG | - | chr7_3:76241829-76241848 | Msa1124970:CDS | 40.0% | |
| GGCGAAACCCTAATAATCGA+TGG | - | chr7_3:76239307-76239326 | Msa1124970:three_prime_UTR | 45.0% | |
| ! | TGCTCCGCCATCGATTATTA+GGG | + | chr7_3:76239317-76239336 | None:intergenic | 45.0% |
| ! | ATGCTCCGCCATCGATTATT+AGG | + | chr7_3:76239318-76239337 | None:intergenic | 45.0% |
| GCTCCGATCTTGAAGTAGAA+TGG | + | chr7_3:76239383-76239402 | None:intergenic | 45.0% | |
| AAGATCGGAGCTTGTAGACA+TGG | - | chr7_3:76239392-76239411 | Msa1124970:three_prime_UTR | 45.0% | |
| TGGTATGAAGACGAGAACAG+CGG | + | chr7_3:76239421-76239440 | None:intergenic | 45.0% | |
| !! | AGTAGGACTAATGGTGGGTT+TGG | + | chr7_3:76239441-76239460 | None:intergenic | 45.0% |
| !! | TCAAGAGATTCAGGTTGAGG+TGG | + | chr7_3:76239557-76239576 | None:intergenic | 45.0% |
| TTTGAGGAGCTGAGCAAGTA+TGG | - | chr7_3:76239701-76239720 | Msa1124970:CDS | 45.0% | |
| ! | CGATCCAACTCATTAGTCTC+TGG | + | chr7_3:76240284-76240303 | None:intergenic | 45.0% |
| TTAGCCAACCCCATTTAGTG+GGG | - | chr7_3:76240347-76240366 | Msa1124970:intron | 45.0% | |
| CCAAACCTTACCCCACTAAA+TGG | + | chr7_3:76240360-76240379 | None:intergenic | 45.0% | |
| CCATTTAGTGGGGTAAGGTT+TGG | - | chr7_3:76240357-76240376 | Msa1124970:intron | 45.0% | |
| TTGGACAGTAGCAGATGTAC+TGG | + | chr7_3:76240633-76240652 | None:intergenic | 45.0% | |
| TACAATTGTGGGTACCAGGA+AGG | + | chr7_3:76240710-76240729 | None:intergenic | 45.0% | |
| AATGTCAGTAGCAATGAGCG+AGG | + | chr7_3:76240931-76240950 | None:intergenic | 45.0% | |
| GCTTCTCGAAAATCCGTAAC+AGG | + | chr7_3:76241004-76241023 | None:intergenic | 45.0% | |
| GAGAATGTATGCAATCGAGG+TGG | - | chr7_3:76241043-76241062 | Msa1124970:intron | 45.0% | |
| TTGGAAGAAGTAGTAGGCGT+TGG | - | chr7_3:76241215-76241234 | Msa1124970:intron | 45.0% | |
| CATAGTTACGATTTCTCGGG+GGG | + | chr7_3:76241270-76241289 | None:intergenic | 45.0% | |
| CCCGAGAAATCGTAACTATG+AGG | - | chr7_3:76241270-76241289 | Msa1124970:intron | 45.0% | |
| AATCCCTTCTACCAGAACCA+CGG | + | chr7_3:76241312-76241331 | None:intergenic | 45.0% | |
| !! | TGGTTCTGGTAGAAGGGATT+TGG | - | chr7_3:76241312-76241331 | Msa1124970:intron | 45.0% |
| AGAACAATGGAACAGGGAGA+AGG | - | chr7_3:76241483-76241502 | Msa1124970:intron | 45.0% | |
| GAGAAGGAAGTTGGAGATTC+TGG | - | chr7_3:76241499-76241518 | Msa1124970:CDS | 45.0% | |
| !!! | CAGACTCGCTGCCATTTTTT+AGG | + | chr7_3:76241567-76241586 | None:intergenic | 45.0% |
| CTAAAAAATGGCAGCGAGTC+TGG | - | chr7_3:76241565-76241584 | Msa1124970:intron | 45.0% | |
| AGTTAACGGAAGAAGTGAGG+AGG | - | chr7_3:76241965-76241984 | Msa1124970:five_prime_UTR | 45.0% | |
| !!! | TTTGATTTTTTTTTTTTTTT+AGG | - | chr7_3:76239661-76239680 | Msa1124970:CDS | 5.0% |
| TGAGGAGGTTGAGGTTGTTG+AGG | + | chr7_3:76239533-76239552 | None:intergenic | 50.0% | |
| !! | GATTCAGGTTGAGGTGGTTG+AGG | + | chr7_3:76239551-76239570 | None:intergenic | 50.0% |
| !! | GGGTCAAGAGATTCAGGTTG+AGG | + | chr7_3:76239560-76239579 | None:intergenic | 50.0% |
| CTTACCCCACTAAATGGGGT+TGG | + | chr7_3:76240354-76240373 | None:intergenic | 50.0% | |
| CAACCCCATTTAGTGGGGTA+AGG | - | chr7_3:76240352-76240371 | Msa1124970:intron | 50.0% | |
| ACCTTGTGCTCTGTCACACA+TGG | - | chr7_3:76240591-76240610 | Msa1124970:intron | 50.0% | |
| ACCATGTGTGACAGAGCACA+AGG | + | chr7_3:76240595-76240614 | None:intergenic | 50.0% | |
| !! | TATGAGGGGCGTTCGTATTC+TGG | - | chr7_3:76241286-76241305 | Msa1124970:intron | 50.0% |
| CTGGTAGAAGGGATTTGGAC+AGG | - | chr7_3:76241317-76241336 | Msa1124970:CDS | 50.0% | |
| AGGGATTTGGACAGGTCTCA+TGG | - | chr7_3:76241325-76241344 | Msa1124970:CDS | 50.0% | |
| ! | GCTTCTTGGCCTTCTACCAT+GGG | + | chr7_3:76241353-76241372 | None:intergenic | 50.0% |
| TTCCTCTATGCCGAGGACTA+CGG | + | chr7_3:76241375-76241394 | None:intergenic | 50.0% | |
| AAGGCGGAGTAGAAGTCCAA+TGG | - | chr7_3:76241393-76241412 | Msa1124970:intron | 50.0% | |
| AGGCGGAGTAGAAGTCCAAT+GGG | - | chr7_3:76241394-76241413 | Msa1124970:intron | 50.0% | |
| GAAGTCCAATGGGAAGAGAC+AGG | - | chr7_3:76241404-76241423 | Msa1124970:intron | 50.0% | |
| AGGAGTCCGAATCCTATCAG+AGG | - | chr7_3:76241424-76241443 | Msa1124970:intron | 50.0% | |
| TGGAACAGGGAGAAGGAAGT+TGG | - | chr7_3:76241490-76241509 | Msa1124970:intron | 50.0% | |
| GAAGAGGCGGGCCTAAAAAA+TGG | - | chr7_3:76241553-76241572 | Msa1124970:CDS | 50.0% | |
| GAAAGGGGTTCGTGAGAGAG+TGG | - | chr7_3:76239286-76239305 | Msa1124970:three_prime_UTR | 55.0% | |
| TGAGGTGGTTGAGGAGGTTG+AGG | + | chr7_3:76239542-76239561 | None:intergenic | 55.0% | |
| !! | TCAGGTTGAGGTGGTTGAGG+AGG | + | chr7_3:76239548-76239567 | None:intergenic | 55.0% |
| !! | AGGCGTTGGAATGACCGTAG+TGG | - | chr7_3:76241229-76241248 | Msa1124970:intron | 55.0% |
| ! | ACCGTAGTGGAAGCAGAAGC+CGG | - | chr7_3:76241242-76241261 | Msa1124970:intron | 55.0% |
| TCCGGCTTCTGCTTCCACTA+CGG | + | chr7_3:76241246-76241265 | None:intergenic | 55.0% | |
| TCGTATTCTGGCCGTGGTTC+TGG | - | chr7_3:76241298-76241317 | Msa1124970:intron | 55.0% | |
| !! | TGGCCGTGGTTCTGGTAGAA+GGG | - | chr7_3:76241306-76241325 | Msa1124970:intron | 55.0% |
| CTCATGGCTCCCATGGTAGA+AGG | - | chr7_3:76241341-76241360 | Msa1124970:CDS | 55.0% | |
| ! | GGCTTCTTGGCCTTCTACCA+TGG | + | chr7_3:76241354-76241373 | None:intergenic | 55.0% |
| GTAGTCCTCGGCATAGAGGA+AGG | - | chr7_3:76241374-76241393 | Msa1124970:CDS | 55.0% | |
| GGACTCCTGTCTCTTCCCAT+TGG | + | chr7_3:76241412-76241431 | None:intergenic | 55.0% | |
| CGGTTCCCTCTATTTCACCC+AGG | + | chr7_3:76241837-76241856 | None:intergenic | 55.0% | |
| TACGATTTCTCGGGGGGCTC+CGG | + | chr7_3:76241264-76241283 | None:intergenic | 60.0% | |
| !! | CTGGCCGTGGTTCTGGTAGA+AGG | - | chr7_3:76241305-76241324 | Msa1124970:intron | 60.0% |
| GACAGGTCTCATGGCTCCCA+TGG | - | chr7_3:76241334-76241353 | Msa1124970:CDS | 60.0% | |
| GGCCAAGAAGCCGTAGTCCT+CGG | - | chr7_3:76241362-76241381 | Msa1124970:CDS | 60.0% | |
| TGCCGAGGACTACGGCTTCT+TGG | + | chr7_3:76241367-76241386 | None:intergenic | 60.0% | |
| AGCCGTAGTCCTCGGCATAG+AGG | - | chr7_3:76241370-76241389 | Msa1124970:CDS | 60.0% | |
| GTCCTCGGCATAGAGGAAGG+CGG | - | chr7_3:76241377-76241396 | Msa1124970:CDS | 60.0% | |
| GGGCGTTCGTATTCTGGCCG+TGG | - | chr7_3:76241292-76241311 | Msa1124970:intron | 65.0% | |
| CTCCGCCTTCCTCTATGCCG+AGG | + | chr7_3:76241382-76241401 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 76239239 | 76242022 | 76239239 | ID=Msa1124970;Name=Msa1124970 |
| chr7_3 | mRNA | 76239239 | 76242022 | 76239239 | ID=Msa1124970-mRNA-1;Parent=Msa1124970;Name=Msa1124970-mRNA-1;_AED=0.18;_eAED=0.18;_QI=87|1|1|1|1|1|5|419|327 |
| chr7_3 | exon | 76239239 | 76240066 | 76239239 | ID=Msa1124970-mRNA-1:exon:20757;Parent=Msa1124970-mRNA-1 |
| chr7_3 | exon | 76240160 | 76240286 | 76240160 | ID=Msa1124970-mRNA-1:exon:20756;Parent=Msa1124970-mRNA-1 |
| chr7_3 | exon | 76241316 | 76241397 | 76241316 | ID=Msa1124970-mRNA-1:exon:20755;Parent=Msa1124970-mRNA-1 |
| chr7_3 | exon | 76241492 | 76241578 | 76241492 | ID=Msa1124970-mRNA-1:exon:20754;Parent=Msa1124970-mRNA-1 |
| chr7_3 | exon | 76241657 | 76242022 | 76241657 | ID=Msa1124970-mRNA-1:exon:20753;Parent=Msa1124970-mRNA-1 |
| chr7_3 | five_prime_UTR | 76241936 | 76242022 | 76241936 | ID=Msa1124970-mRNA-1:five_prime_utr;Parent=Msa1124970-mRNA-1 |
| chr7_3 | CDS | 76241657 | 76241935 | 76241657 | ID=Msa1124970-mRNA-1:cds;Parent=Msa1124970-mRNA-1 |
| chr7_3 | CDS | 76241492 | 76241578 | 76241492 | ID=Msa1124970-mRNA-1:cds;Parent=Msa1124970-mRNA-1 |
| chr7_3 | CDS | 76241316 | 76241397 | 76241316 | ID=Msa1124970-mRNA-1:cds;Parent=Msa1124970-mRNA-1 |
| chr7_3 | CDS | 76240160 | 76240286 | 76240160 | ID=Msa1124970-mRNA-1:cds;Parent=Msa1124970-mRNA-1 |
| chr7_3 | CDS | 76239658 | 76240066 | 76239658 | ID=Msa1124970-mRNA-1:cds;Parent=Msa1124970-mRNA-1 |
| chr7_3 | three_prime_UTR | 76239239 | 76239657 | 76239239 | ID=Msa1124970-mRNA-1:three_prime_utr;Parent=Msa1124970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
