Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423040 | sp|Q9FMY5|U2AFB_ARATH | 64.026 | 303 | 83 | 5 | 1 | 298 | 1 | 282 | 2.74e-114 | 335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423040 | A0A072U424 | 98.777 | 327 | 4 | 0 | 1 | 327 | 1 | 327 | 0.0 | 670 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094600 | Msa1423040 | 0.818468 | 1.929517e-52 | -8.615850e-47 |
| Msa0709390 | Msa1423040 | 0.991414 | 1.594181e-187 | -8.615850e-47 |
| Msa1041840 | Msa1423040 | 0.989251 | 2.506143e-177 | -8.615850e-47 |
| Msa1124970 | Msa1423040 | 0.998797 | 5.510002e-277 | -8.615850e-47 |
| Msa1167350 | Msa1423040 | 0.987035 | 7.908531e-169 | -8.615850e-47 |
| Msa0880030 | Msa1423040 | 0.918480 | 1.478794e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423040 | MtrunA17_Chr7g0265751 | 98.777 | 327 | 4 | 0 | 1 | 327 | 1 | 327 | 0.0 | 670 |
| Msa1423040 | MtrunA17_Chr2g0320801 | 60.377 | 318 | 87 | 4 | 1 | 305 | 1 | 292 | 8.14e-119 | 345 |
| Msa1423040 | MtrunA17_Chr1g0162821 | 72.362 | 199 | 41 | 2 | 1 | 199 | 1 | 185 | 1.26e-106 | 312 |
| Msa1423040 | MtrunA17_Chr2g0276901 | 37.755 | 98 | 58 | 1 | 92 | 186 | 28 | 125 | 5.28e-18 | 84.7 |
| Msa1423040 | MtrunA17_Chr2g0276891 | 55.102 | 49 | 22 | 0 | 9 | 57 | 184 | 232 | 2.88e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423040 | AT5G42820.1 | 64.026 | 303 | 83 | 5 | 1 | 298 | 1 | 282 | 2.79e-115 | 335 |
| Msa1423040 | AT5G42820.2 | 64.026 | 303 | 83 | 5 | 1 | 298 | 1 | 282 | 2.79e-115 | 335 |
| Msa1423040 | AT1G27650.1 | 65.461 | 304 | 74 | 7 | 1 | 292 | 1 | 285 | 5.07e-113 | 330 |
| Msa1423040 | AT1G27650.2 | 59.843 | 254 | 71 | 7 | 51 | 292 | 1 | 235 | 1.92e-73 | 227 |
| Msa1423040 | AT1G10320.2 | 34.426 | 183 | 97 | 3 | 9 | 186 | 228 | 392 | 1.51e-34 | 134 |
| Msa1423040 | AT1G10320.1 | 34.426 | 183 | 97 | 3 | 9 | 186 | 237 | 401 | 1.69e-34 | 134 |
| Msa1423040 | AT3G44785.1 | 65.753 | 73 | 24 | 1 | 1 | 73 | 1 | 72 | 3.90e-29 | 107 |
Find 123 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATATTTCATTTCTGTATT+TGG | 0.102491 | tig0025511:-7719 | Msa1423040:three_prime_UTR |
| ATGCTCCGCCATCGATTATT+AGG | 0.132506 | tig0025511:+10328 | None:intergenic |
| TAAGAGATGTGAAACAATTT+TGG | 0.157960 | tig0025511:-7613 | Msa1423040:three_prime_UTR |
| AAGTGTTCTTGGAGTTTATC+AGG | 0.235787 | tig0025511:+10065 | None:intergenic |
| TATGAGGGGCGTTCGTATTC+TGG | 0.248763 | tig0025511:-8210 | Msa1423040:CDS |
| CATTCAGAAGATCCACAAAA+TGG | 0.251545 | tig0025511:+7493 | None:intergenic |
| CTTGAATATTTGTGACAATT+TGG | 0.267256 | tig0025511:-9906 | Msa1423040:CDS |
| GATTTGAGGAAGCGATTATT+TGG | 0.276417 | tig0025511:-8300 | Msa1423040:CDS |
| TTATCAGGGTCAAGAGATTC+AGG | 0.286148 | tig0025511:+10080 | None:intergenic |
| TGCCGAGGACTACGGCTTCT+TGG | 0.303158 | tig0025511:+8132 | None:intergenic |
| TACATACATCGAAGTGTTCT+TGG | 0.310686 | tig0025511:+10054 | None:intergenic |
| TCGTATTCTGGCCGTGGTTC+TGG | 0.312884 | tig0025511:-8198 | Msa1423040:CDS |
| TTACTTGCAGAAATTATTAC+AGG | 0.313162 | tig0025511:+7857 | None:intergenic |
| AATAATTTCTGCAAGTAATC+TGG | 0.317375 | tig0025511:-7852 | Msa1423040:three_prime_UTR |
| GAGAAGGAAGTTGGAGATTC+TGG | 0.338699 | tig0025511:-7997 | Msa1423040:CDS |
| TGAGGTTGTTGAGGTTGATT+AGG | 0.344172 | tig0025511:+10122 | None:intergenic |
| TTACAGGGTCTTCTCACTTT+GGG | 0.346064 | tig0025511:+7873 | None:intergenic |
| GAGCATTTAGCATCGATATT+CGG | 0.354185 | tig0025511:-10311 | Msa1423040:CDS |
| CTTTCTCTTTCTCCTCTGAT+AGG | 0.355688 | tig0025511:+8060 | None:intergenic |
| TGAGGTGGTTGAGGAGGTTG+AGG | 0.362652 | tig0025511:+10104 | None:intergenic |
| TGCTCCGCCATCGATTATTA+GGG | 0.367053 | tig0025511:+10329 | None:intergenic |
| CTTTCTCCTCTGATAGGATT+CGG | 0.367164 | tig0025511:+8066 | None:intergenic |
| TGGTTCTGGTAGAAGGGATT+TGG | 0.369893 | tig0025511:-8184 | Msa1423040:CDS |
| CCCTCATAGTTACGATTTCT+CGG | 0.370767 | tig0025511:+8225 | None:intergenic |
| CTGGCCGTGGTTCTGGTAGA+AGG | 0.372740 | tig0025511:-8191 | Msa1423040:CDS |
| GATTCAGGTTGAGGTGGTTG+AGG | 0.376296 | tig0025511:+10095 | None:intergenic |
| ATAAAGTTAAGGTTCATATC+AGG | 0.384960 | tig0025511:+10155 | None:intergenic |
| TTTGAGGAGCTGAGCAAGTA+TGG | 0.394906 | tig0025511:-9941 | Msa1423040:CDS |
| GAGTAGGATTGATAAAGTTA+AGG | 0.396234 | tig0025511:+10144 | None:intergenic |
| GGCTTCTTGGCCTTCTACCA+TGG | 0.400878 | tig0025511:+8145 | None:intergenic |
| CTAGAATAGAACAATGGAAC+AGG | 0.401571 | tig0025511:-8020 | Msa1423040:CDS |
| TGTTGACTTCTCTCCTGTTA+CGG | 0.406173 | tig0025511:-8508 | Msa1423040:CDS |
| GCTTCTCGAAAATCCGTAAC+AGG | 0.408045 | tig0025511:+8495 | None:intergenic |
| ATTACAGGGTCTTCTCACTT+TGG | 0.418323 | tig0025511:+7872 | None:intergenic |
| AAAACTACAGCCAACTCAAT+AGG | 0.421667 | tig0025511:+7814 | None:intergenic |
| TGACAATTTGGCTGATCATA+TGG | 0.424836 | tig0025511:-9894 | Msa1423040:intron |
| AGTAGGACTAATGGTGGGTT+TGG | 0.429071 | tig0025511:+10205 | None:intergenic |
| AACATAAATAAATCTCGAAA+GGG | 0.429853 | tig0025511:-10373 | Msa1423040:five_prime_UTR |
| CTCATGGCTCCCATGGTAGA+AGG | 0.441236 | tig0025511:-8155 | Msa1423040:CDS |
| AATCACTATAAAATAGTTAA+CGG | 0.444979 | tig0025511:-7545 | Msa1423040:three_prime_UTR |
| TGTTGAGGTTGATTAGGAGT+AGG | 0.451883 | tig0025511:+10128 | None:intergenic |
| CCTTTGATTTCAGAGATTTG+AGG | 0.452267 | tig0025511:-8314 | Msa1423040:intron |
| GATTATTTGGAAGAAGTAGT+AGG | 0.454782 | tig0025511:-8287 | Msa1423040:CDS |
| CCTCATAGTTACGATTTCTC+GGG | 0.458427 | tig0025511:+8226 | None:intergenic |
| TGCATCTAAAGAAGATTAGC+AGG | 0.461797 | tig0025511:-8416 | Msa1423040:intron |
| AGATTACCTGGGTGAAATAG+AGG | 0.463565 | tig0025511:-7668 | Msa1423040:three_prime_UTR |
| CCCGAGAAATCGTAACTATG+AGG | 0.480351 | tig0025511:-8226 | Msa1423040:CDS |
| TCAGGTTGAGGTGGTTGAGG+AGG | 0.483616 | tig0025511:+10098 | None:intergenic |
| AAAGAGAAAGTAGTGTAGAA+AGG | 0.483749 | tig0025511:-8047 | Msa1423040:CDS |
| TGGAACAGGGAGAAGGAAGT+TGG | 0.485919 | tig0025511:-8006 | Msa1423040:CDS |
| ATTCAGAAGATCCACAAAAT+GGG | 0.489931 | tig0025511:+7494 | None:intergenic |
| GGAGAGAAGTCAACAATGAT+TGG | 0.494146 | tig0025511:+8516 | None:intergenic |
| GGACTCCTGTCTCTTCCCAT+TGG | 0.497688 | tig0025511:+8087 | None:intergenic |
| AAACTCTGTTGGAGATTACC+TGG | 0.498335 | tig0025511:-7680 | Msa1423040:three_prime_UTR |
| GCTCCGATCTTGAAGTAGAA+TGG | 0.500982 | tig0025511:+10263 | None:intergenic |
| CTCATAGTTACGATTTCTCG+GGG | 0.504601 | tig0025511:+8227 | None:intergenic |
| CTGGTAGAAGGGATTTGGAC+AGG | 0.507028 | tig0025511:-8179 | Msa1423040:CDS |
| GGCCAAGAAGCCGTAGTCCT+CGG | 0.507965 | tig0025511:-8134 | Msa1423040:CDS |
| TGAGGAGGTTGAGGTTGTTG+AGG | 0.510776 | tig0025511:+10113 | None:intergenic |
| GCTTCTTGGCCTTCTACCAT+GGG | 0.511138 | tig0025511:+8146 | None:intergenic |
| GGGTCAAGAGATTCAGGTTG+AGG | 0.514083 | tig0025511:+10086 | None:intergenic |
| GGGCGTTCGTATTCTGGCCG+TGG | 0.515780 | tig0025511:-8204 | Msa1423040:CDS |
| TTGGAAGAAGTAGTAGGCGT+TGG | 0.517691 | tig0025511:-8281 | Msa1423040:CDS |
| GACAGGTCTCATGGCTCCCA+TGG | 0.524520 | tig0025511:-8162 | Msa1423040:CDS |
| TTAGTTTGCACCTATTGAGT+TGG | 0.528104 | tig0025511:-7824 | Msa1423040:three_prime_UTR |
| GAGAACAAGAGTAGGACTAA+TGG | 0.530039 | tig0025511:+10196 | None:intergenic |
| AGGCGGAGTAGAAGTCCAAT+GGG | 0.531064 | tig0025511:-8102 | Msa1423040:CDS |
| ATCAGGACGTTGATACATGT+TGG | 0.531267 | tig0025511:+10172 | None:intergenic |
| GAAGTCCAATGGGAAGAGAC+AGG | 0.531891 | tig0025511:-8092 | Msa1423040:CDS |
| TGTATATGTTCAGTATAAAG+AGG | 0.534599 | tig0025511:-9770 | Msa1423040:CDS |
| ACCGTAGTGGAAGCAGAAGC+CGG | 0.541010 | tig0025511:-8254 | Msa1423040:CDS |
| CAACATAAATAAATCTCGAA+AGG | 0.544906 | tig0025511:-10374 | Msa1423040:five_prime_UTR |
| TGTTCGATGGTAAACTCTGT+TGG | 0.545340 | tig0025511:-7691 | Msa1423040:three_prime_UTR |
| TCCGGCTTCTGCTTCCACTA+CGG | 0.545385 | tig0025511:+8253 | None:intergenic |
| TGGCCGTGGTTCTGGTAGAA+GGG | 0.546507 | tig0025511:-8190 | Msa1423040:CDS |
| CCGAGAAATCGTAACTATGA+GGG | 0.550258 | tig0025511:-8225 | Msa1423040:CDS |
| AATAGTTAACGGAAGAAGTG+AGG | 0.560146 | tig0025511:-7534 | Msa1423040:three_prime_UTR |
| AGGGATTTGGACAGGTCTCA+TGG | 0.560557 | tig0025511:-8171 | Msa1423040:CDS |
| AGTGTTCTTGGAGTTTATCA+GGG | 0.562952 | tig0025511:+10066 | None:intergenic |
| AACAATGATTATGAAGAGGC+GGG | 0.563713 | tig0025511:-7955 | Msa1423040:CDS |
| TTCCTCTATGCCGAGGACTA+CGG | 0.567765 | tig0025511:+8124 | None:intergenic |
| AATGCTCTTATGAATCTCAC+TGG | 0.570244 | tig0025511:-9733 | Msa1423040:CDS |
| TGTCCATTCTACTTCAAGAT+CGG | 0.570630 | tig0025511:-10266 | Msa1423040:CDS |
| AAGGCGGAGTAGAAGTCCAA+TGG | 0.574467 | tig0025511:-8103 | Msa1423040:CDS |
| AGCCGTAGTCCTCGGCATAG+AGG | 0.581691 | tig0025511:-8126 | Msa1423040:CDS |
| AGAACAATGGAACAGGGAGA+AGG | 0.596602 | tig0025511:-8013 | Msa1423040:CDS |
| ATTTGCAACAGAACAAAGGA+AGG | 0.601935 | tig0025511:+7565 | None:intergenic |
| TCATAAGAGCATTAGCAGCA+TGG | 0.602037 | tig0025511:+9743 | None:intergenic |
| GTAGTCCTCGGCATAGAGGA+AGG | 0.603594 | tig0025511:-8122 | Msa1423040:CDS |
| GAAAGGGGTTCGTGAGAGAG+TGG | 0.603769 | tig0025511:-10357 | Msa1423040:five_prime_UTR |
| TAACAATGATTATGAAGAGG+CGG | 0.605105 | tig0025511:-7956 | Msa1423040:CDS |
| AGAAGTCAACAATGATTGGT+CGG | 0.606403 | tig0025511:+8520 | None:intergenic |
| CATAGTTACGATTTCTCGGG+GGG | 0.607441 | tig0025511:+8229 | None:intergenic |
| AGTGATTTGCAACAGAACAA+AGG | 0.611402 | tig0025511:+7561 | None:intergenic |
| GATTACCTGGGTGAAATAGA+GGG | 0.614308 | tig0025511:-7667 | Msa1423040:three_prime_UTR |
| GGCGAAACCCTAATAATCGA+TGG | 0.614459 | tig0025511:-10336 | Msa1423040:exon |
| AACAAGAGTAGGACTAATGG+TGG | 0.614682 | tig0025511:+10199 | None:intergenic |
| TCAAGAGATTCAGGTTGAGG+TGG | 0.615585 | tig0025511:+10089 | None:intergenic |
| AAGATCGGAGCTTGTAGACA+TGG | 0.618937 | tig0025511:-10251 | Msa1423040:CDS |
| CTCCGCCTTCCTCTATGCCG+AGG | 0.622022 | tig0025511:+8117 | None:intergenic |
| GTATTTGGATGAATGTTCGA+TGG | 0.623654 | tig0025511:-7704 | Msa1423040:three_prime_UTR |
| AGTTAACGGAAGAAGTGAGG+AGG | 0.623894 | tig0025511:-7531 | Msa1423040:three_prime_UTR |
| GAGTAACAATGATTATGAAG+AGG | 0.626539 | tig0025511:-7959 | Msa1423040:CDS |
| AGTTGGAGATTCTGGTAACA+AGG | 0.630652 | tig0025511:-7989 | Msa1423040:CDS |
| AGGAGTCCGAATCCTATCAG+AGG | 0.630679 | tig0025511:-8072 | Msa1423040:CDS |
| AACTCTGTTGGAGATTACCT+GGG | 0.633510 | tig0025511:-7679 | Msa1423040:three_prime_UTR |
| CGAGAAATCGTAACTATGAG+GGG | 0.636005 | tig0025511:-8224 | Msa1423040:CDS |
| GAAGAGAATGTATGCAATCG+AGG | 0.636366 | tig0025511:-8456 | Msa1423040:CDS |
| ACATAAATAAATCTCGAAAG+GGG | 0.642552 | tig0025511:-10372 | Msa1423040:five_prime_UTR |
| TACTTGCAGAAATTATTACA+GGG | 0.643592 | tig0025511:+7858 | None:intergenic |
| ATGTTGGAGAGAACAAGAGT+AGG | 0.650220 | tig0025511:+10188 | None:intergenic |
| TCATAGTTACGATTTCTCGG+GGG | 0.654148 | tig0025511:+8228 | None:intergenic |
| GGAGAGCTAGAATAGAACAA+TGG | 0.656515 | tig0025511:-8026 | Msa1423040:CDS |
| CGGTTCCCTCTATTTCACCC+AGG | 0.673223 | tig0025511:+7662 | None:intergenic |
| GCATAGTTGAAATTCAAACA+CGG | 0.675622 | tig0025511:+7642 | None:intergenic |
| AGGCGTTGGAATGACCGTAG+TGG | 0.684717 | tig0025511:-8267 | Msa1423040:CDS |
| TAGAATAGAACAATGGAACA+GGG | 0.687714 | tig0025511:-8019 | Msa1423040:CDS |
| AATCCCTTCTACCAGAACCA+CGG | 0.694334 | tig0025511:+8187 | None:intergenic |
| ACAAGAGTAGGACTAATGGT+GGG | 0.704223 | tig0025511:+10200 | None:intergenic |
| GAAACCCTAATAATCGATGG+CGG | 0.712302 | tig0025511:-10333 | Msa1423040:exon |
| GAGAATGTATGCAATCGAGG+TGG | 0.723621 | tig0025511:-8453 | Msa1423040:CDS |
| GTCCTCGGCATAGAGGAAGG+CGG | 0.728288 | tig0025511:-8119 | Msa1423040:CDS |
| TGGTATGAAGACGAGAACAG+CGG | 0.740225 | tig0025511:+10225 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAAAATAAAAAATTGAA+GGG | + | tig0025511:7888-7907 | None:intergenic | 10.0% |
| !! | AAATCAAAATAAAAAATTGA+AGG | + | tig0025511:7889-7908 | None:intergenic | 10.0% |
| !! | AACAAAAATCATAAAAATTA+GGG | + | tig0025511:8093-8112 | None:intergenic | 10.0% |
| !! | AAACAAAAATCATAAAAATT+AGG | + | tig0025511:8094-8113 | None:intergenic | 10.0% |
| !!! | TATGATTTTTGTTTTTTTAT+AGG | - | tig0025511:8100-8119 | Msa1423040:CDS | 10.0% |
| !! | TATATATATATATGATGATT+TGG | - | tig0025511:8238-8257 | Msa1423040:CDS | 10.0% |
| !! | ATCAAAATAAAAAATTGAAG+GGG | + | tig0025511:7887-7906 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTTTTTTATAGGT+TGG | - | tig0025511:8104-8123 | Msa1423040:CDS | 15.0% |
| !! | AAAAAGAAAATTACAATTGT+GGG | + | tig0025511:9125-9144 | None:intergenic | 15.0% |
| !! | CAAATATTAATGATTATTTC+AGG | - | tig0025511:9226-9245 | Msa1423040:intron | 15.0% |
| !! | AATCACTATAAAATAGTTAA+CGG | - | tig0025511:10355-10374 | Msa1423040:five_prime_UTR | 15.0% |
| !! | AACATAAATAAATCTCGAAA+GGG | - | tig0025511:7527-7546 | Msa1423040:three_prime_UTR | 20.0% |
| !!! | TTTTTATGAAGATCTATTTG+AGG | - | tig0025511:7943-7962 | Msa1423040:CDS | 20.0% |
| !! | TTCATAAATCAAAAAGAGAA+AGG | + | tig0025511:8046-8065 | None:intergenic | 20.0% |
| !!! | TTTTTCTAAGACAAACTATT+AGG | - | tig0025511:8658-8677 | Msa1423040:intron | 20.0% |
| !! | TTTAGATTGAGATATTCAAT+TGG | - | tig0025511:8865-8884 | Msa1423040:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTCCTTCC+TGG | - | tig0025511:9097-9116 | Msa1423040:intron | 20.0% |
| !! | GAAAAAGAAAATTACAATTG+TGG | + | tig0025511:9126-9145 | None:intergenic | 20.0% |
| !!! | TATTAATGATTATTTCAGGT+AGG | - | tig0025511:9230-9249 | Msa1423040:intron | 20.0% |
| !!! | AAAAATTGAAAAGCATGAAT+AGG | + | tig0025511:9527-9546 | None:intergenic | 20.0% |
| ! | CAACATAAATAAATCTCGAA+AGG | - | tig0025511:7526-7545 | Msa1423040:three_prime_UTR | 25.0% |
| ! | ACATAAATAAATCTCGAAAG+GGG | - | tig0025511:7528-7547 | Msa1423040:three_prime_UTR | 25.0% |
| ! | ATAAAGTTAAGGTTCATATC+AGG | + | tig0025511:7748-7767 | None:intergenic | 25.0% |
| ! | CTTGAATATTTGTGACAATT+TGG | - | tig0025511:7994-8013 | Msa1423040:CDS | 25.0% |
| ! | TGTATATGTTCAGTATAAAG+AGG | - | tig0025511:8130-8149 | Msa1423040:CDS | 25.0% |
| !!! | TATATATGATGATTTGGTTG+TGG | - | tig0025511:8244-8263 | Msa1423040:CDS | 25.0% |
| ! | TTATTCAATTGTTTGTGCTT+TGG | - | tig0025511:8280-8299 | Msa1423040:CDS | 25.0% |
| ! | ACATGACATATATTGAAACA+TGG | + | tig0025511:8344-8363 | None:intergenic | 25.0% |
| !!! | CACTTGATTTATTTTTGTGT+TGG | + | tig0025511:8415-8434 | None:intergenic | 25.0% |
| ! | ACTAAAGGCAATATTCATAT+TGG | - | tig0025511:8826-8845 | Msa1423040:intron | 25.0% |
| ! | ATTGAGATATTCAATTGGTT+TGG | - | tig0025511:8870-8889 | Msa1423040:intron | 25.0% |
| !! | TTATCTGATGGAATGATTTT+TGG | - | tig0025511:8968-8987 | Msa1423040:intron | 25.0% |
| ! | TACTTGCAGAAATTATTACA+GGG | + | tig0025511:10045-10064 | None:intergenic | 25.0% |
| ! | TTACTTGCAGAAATTATTAC+AGG | + | tig0025511:10046-10065 | None:intergenic | 25.0% |
| ! | AATAATTTCTGCAAGTAATC+TGG | - | tig0025511:10048-10067 | Msa1423040:intron | 25.0% |
| ! | GGATATTTCATTTCTGTATT+TGG | - | tig0025511:10181-10200 | Msa1423040:CDS | 25.0% |
| !! | TAAGAGATGTGAAACAATTT+TGG | - | tig0025511:10287-10306 | Msa1423040:CDS | 25.0% |
| GAGTAGGATTGATAAAGTTA+AGG | + | tig0025511:7759-7778 | None:intergenic | 30.0% | |
| !!! | AGGTTCTGAATTTTGTAGTT+AGG | - | tig0025511:8202-8221 | Msa1423040:CDS | 30.0% |
| !!! | GGTTCTGAATTTTGTAGTTA+GGG | - | tig0025511:8203-8222 | Msa1423040:CDS | 30.0% |
| ! | CAACTTTAGAGAGATAGTTA+GGG | - | tig0025511:8500-8519 | Msa1423040:CDS | 30.0% |
| ! | TAATGAGTTGGATCGAAATT+TGG | - | tig0025511:8695-8714 | Msa1423040:intron | 30.0% |
| TGGTACATGATAGAACATTA+TGG | - | tig0025511:8715-8734 | Msa1423040:intron | 30.0% | |
| TGAATCCTTTGTGTAACTAA+AGG | - | tig0025511:8811-8830 | Msa1423040:intron | 30.0% | |
| TATTGCCTTTAGTTACACAA+AGG | + | tig0025511:8819-8838 | None:intergenic | 30.0% | |
| CAATAAAAGTGGGTACAATA+AGG | + | tig0025511:8915-8934 | None:intergenic | 30.0% | |
| !! | CTTATTGTACCCACTTTTAT+TGG | - | tig0025511:8913-8932 | Msa1423040:intron | 30.0% |
| !! | TGATGGAATGATTTTTGGAT+AGG | - | tig0025511:8973-8992 | Msa1423040:intron | 30.0% |
| !! | AATCTCTGAAATCAAAGGTA+AGG | + | tig0025511:9584-9603 | None:intergenic | 30.0% |
| GATTATTTGGAAGAAGTAGT+AGG | - | tig0025511:9613-9632 | Msa1423040:intron | 30.0% | |
| AAAGAGAAAGTAGTGTAGAA+AGG | - | tig0025511:9853-9872 | Msa1423040:intron | 30.0% | |
| TAGAATAGAACAATGGAACA+GGG | - | tig0025511:9881-9900 | Msa1423040:intron | 30.0% | |
| GAGTAACAATGATTATGAAG+AGG | - | tig0025511:9941-9960 | Msa1423040:CDS | 30.0% | |
| TAACAATGATTATGAAGAGG+CGG | - | tig0025511:9944-9963 | Msa1423040:CDS | 30.0% | |
| GCATAGTTGAAATTCAAACA+CGG | + | tig0025511:10261-10280 | None:intergenic | 30.0% | |
| ! | AACAATTTTGGATCGAATCA+TGG | - | tig0025511:10299-10318 | Msa1423040:CDS | 30.0% |
| !! | GAGCATTTAGCATCGATATT+CGG | - | tig0025511:7589-7608 | Msa1423040:three_prime_UTR | 35.0% |
| TGTCCATTCTACTTCAAGAT+CGG | - | tig0025511:7634-7653 | Msa1423040:three_prime_UTR | 35.0% | |
| AGTGTTCTTGGAGTTTATCA+GGG | + | tig0025511:7837-7856 | None:intergenic | 35.0% | |
| AAGTGTTCTTGGAGTTTATC+AGG | + | tig0025511:7838-7857 | None:intergenic | 35.0% | |
| ! | TACATACATCGAAGTGTTCT+TGG | + | tig0025511:7849-7868 | None:intergenic | 35.0% |
| TGACAATTTGGCTGATCATA+TGG | - | tig0025511:8006-8025 | Msa1423040:CDS | 35.0% | |
| AATGCTCTTATGAATCTCAC+TGG | - | tig0025511:8167-8186 | Msa1423040:CDS | 35.0% | |
| ! | CTCACTGGAAGATTTTATTC+AGG | - | tig0025511:8182-8201 | Msa1423040:CDS | 35.0% |
| TATATACGTTGAAACACGAG+TGG | + | tig0025511:8380-8399 | None:intergenic | 35.0% | |
| AGACTAGAGAGGATATGATT+AGG | - | tig0025511:8472-8491 | Msa1423040:CDS | 35.0% | |
| !! | CCTAACTATCTCTCTAAAGT+TGG | + | tig0025511:8502-8521 | None:intergenic | 35.0% |
| ! | CCAACTTTAGAGAGATAGTT+AGG | - | tig0025511:8499-8518 | Msa1423040:CDS | 35.0% |
| AGCACTTACAGTAGAAAAGA+TGG | - | tig0025511:8524-8543 | Msa1423040:CDS | 35.0% | |
| TAGAAAAGATGGAGCAAACT+AGG | - | tig0025511:8535-8554 | Msa1423040:intron | 35.0% | |
| GACATGAGGATTAATTAGTG+AGG | - | tig0025511:8586-8605 | Msa1423040:intron | 35.0% | |
| TAAGAAGGGCCAATAAAAGT+GGG | + | tig0025511:8925-8944 | None:intergenic | 35.0% | |
| ACTCCCAAAATGAGTAAGAA+GGG | + | tig0025511:8939-8958 | None:intergenic | 35.0% | |
| ATTCCATCAGATAAAGCTCA+AGG | + | tig0025511:8962-8981 | None:intergenic | 35.0% | |
| AAATTACAATTGTGGGTACC+AGG | + | tig0025511:9118-9137 | None:intergenic | 35.0% | |
| AAGCAATGATAGACAATGCA+CGG | + | tig0025511:9306-9325 | None:intergenic | 35.0% | |
| TTGCTACTGACATTGTGATT+TGG | - | tig0025511:9341-9360 | Msa1423040:intron | 35.0% | |
| AGAAGTCAACAATGATTGGT+CGG | + | tig0025511:9383-9402 | None:intergenic | 35.0% | |
| !! | ATTTTCGAGAAGCTACTTGT+AGG | - | tig0025511:9415-9434 | Msa1423040:intron | 35.0% |
| TGCATCTAAAGAAGATTAGC+AGG | - | tig0025511:9484-9503 | Msa1423040:intron | 35.0% | |
| ! | AAAAGCATGAATAGGCTATG+TGG | + | tig0025511:9519-9538 | None:intergenic | 35.0% |
| !! | CCTCAAATCTCTGAAATCAA+AGG | + | tig0025511:9589-9608 | None:intergenic | 35.0% |
| ! | CCTTTGATTTCAGAGATTTG+AGG | - | tig0025511:9586-9605 | Msa1423040:intron | 35.0% |
| GATTTGAGGAAGCGATTATT+TGG | - | tig0025511:9600-9619 | Msa1423040:intron | 35.0% | |
| CTAGAATAGAACAATGGAAC+AGG | - | tig0025511:9880-9899 | Msa1423040:intron | 35.0% | |
| AACAATGATTATGAAGAGGC+GGG | - | tig0025511:9945-9964 | Msa1423040:CDS | 35.0% | |
| !! | TTAGTTTGCACCTATTGAGT+TGG | - | tig0025511:10076-10095 | Msa1423040:CDS | 35.0% |
| AAAACTACAGCCAACTCAAT+AGG | + | tig0025511:10089-10108 | None:intergenic | 35.0% | |
| !! | GTTTTGATATAGTTCAGCAG+TGG | - | tig0025511:10160-10179 | Msa1423040:CDS | 35.0% |
| GTATTTGGATGAATGTTCGA+TGG | - | tig0025511:10196-10215 | Msa1423040:CDS | 35.0% | |
| ATTTGCAACAGAACAAAGGA+AGG | + | tig0025511:10338-10357 | None:intergenic | 35.0% | |
| ! | AGTGATTTGCAACAGAACAA+AGG | + | tig0025511:10342-10361 | None:intergenic | 35.0% |
| AATAGTTAACGGAAGAAGTG+AGG | - | tig0025511:10366-10385 | Msa1423040:five_prime_UTR | 35.0% | |
| ! | AGAAAATCTGACCCATTTTG+TGG | - | tig0025511:10395-10414 | Msa1423040:five_prime_UTR | 35.0% |
| GAAACCCTAATAATCGATGG+CGG | - | tig0025511:7567-7586 | Msa1423040:three_prime_UTR | 40.0% | |
| ACAAGAGTAGGACTAATGGT+GGG | + | tig0025511:7703-7722 | None:intergenic | 40.0% | |
| AACAAGAGTAGGACTAATGG+TGG | + | tig0025511:7704-7723 | None:intergenic | 40.0% | |
| GAGAACAAGAGTAGGACTAA+TGG | + | tig0025511:7707-7726 | None:intergenic | 40.0% | |
| ATGTTGGAGAGAACAAGAGT+AGG | + | tig0025511:7715-7734 | None:intergenic | 40.0% | |
| ATCAGGACGTTGATACATGT+TGG | + | tig0025511:7731-7750 | None:intergenic | 40.0% | |
| ! | TGTTGAGGTTGATTAGGAGT+AGG | + | tig0025511:7775-7794 | None:intergenic | 40.0% |
| ! | TGAGGTTGTTGAGGTTGATT+AGG | + | tig0025511:7781-7800 | None:intergenic | 40.0% |
| TTATCAGGGTCAAGAGATTC+AGG | + | tig0025511:7823-7842 | None:intergenic | 40.0% | |
| !! | TCATAAGAGCATTAGCAGCA+TGG | + | tig0025511:8160-8179 | None:intergenic | 40.0% |
| ! | GATGCGTGATCTGATAATGA+TGG | - | tig0025511:8316-8335 | Msa1423040:intron | 40.0% |
| AATCAAGTGTAGCAAAGACG+AGG | - | tig0025511:8426-8445 | Msa1423040:CDS | 40.0% | |
| ATCAAGTGTAGCAAAGACGA+GGG | - | tig0025511:8427-8446 | Msa1423040:CDS | 40.0% | |
| GGGTGTTAGCATTTGATGTA+TGG | - | tig0025511:8447-8466 | Msa1423040:CDS | 40.0% | |
| GATGTATGGTAAGACTAGAG+AGG | - | tig0025511:8461-8480 | Msa1423040:CDS | 40.0% | |
| ACATGTAGAGAGAAGACATG+AGG | - | tig0025511:8572-8591 | Msa1423040:intron | 40.0% | |
| GAAGGTAGTCAAATCACTAG+AGG | - | tig0025511:8624-8643 | Msa1423040:intron | 40.0% | |
| AGATCCAGAGACTAATGAGT+TGG | - | tig0025511:8683-8702 | Msa1423040:intron | 40.0% | |
| !! | ACTAAATGGGGTTGGCTAAA+TGG | + | tig0025511:8752-8771 | None:intergenic | 40.0% |
| ATTTAGCCAACCCCATTTAG+TGG | - | tig0025511:8751-8770 | Msa1423040:intron | 40.0% | |
| TTTAGCCAACCCCATTTAGT+GGG | - | tig0025511:8752-8771 | Msa1423040:intron | 40.0% | |
| AAACCTTACCCCACTAAATG+GGG | + | tig0025511:8764-8783 | None:intergenic | 40.0% | |
| CAAACCTTACCCCACTAAAT+GGG | + | tig0025511:8765-8784 | None:intergenic | 40.0% | |
| GTAAGAAGGGCCAATAAAAG+TGG | + | tig0025511:8926-8945 | None:intergenic | 40.0% | |
| ! | TTGGCCCTTCTTACTCATTT+TGG | - | tig0025511:8932-8951 | Msa1423040:intron | 40.0% |
| ! | TGGCCCTTCTTACTCATTTT+GGG | - | tig0025511:8933-8952 | Msa1423040:intron | 40.0% |
| GACTCCCAAAATGAGTAAGA+AGG | + | tig0025511:8940-8959 | None:intergenic | 40.0% | |
| ! | AGTCCTTGAGCTTTATCTGA+TGG | - | tig0025511:8956-8975 | Msa1423040:intron | 40.0% |
| ACAAGCAGTAAGGACAACAT+TGG | + | tig0025511:9058-9077 | None:intergenic | 40.0% | |
| TGCAAACAACACAAGCAGTA+AGG | + | tig0025511:9068-9087 | None:intergenic | 40.0% | |
| CTACCGAGTTCAGTATTGTT+TGG | - | tig0025511:9163-9182 | Msa1423040:intron | 40.0% | |
| CAGCCAAACAATACTGAACT+CGG | + | tig0025511:9169-9188 | None:intergenic | 40.0% | |
| AGTATTGTTTGGCTGAGATG+AGG | - | tig0025511:9174-9193 | Msa1423040:intron | 40.0% | |
| GATTTGGCTGTCATTCTTCT+AGG | - | tig0025511:9357-9376 | Msa1423040:intron | 40.0% | |
| GGAGAGAAGTCAACAATGAT+TGG | + | tig0025511:9387-9406 | None:intergenic | 40.0% | |
| !! | TGTTGACTTCTCTCCTGTTA+CGG | - | tig0025511:9392-9411 | Msa1423040:intron | 40.0% |
| GAAGAGAATGTATGCAATCG+AGG | - | tig0025511:9444-9463 | Msa1423040:intron | 40.0% | |
| TCATAGTTACGATTTCTCGG+GGG | + | tig0025511:9675-9694 | None:intergenic | 40.0% | |
| CTCATAGTTACGATTTCTCG+GGG | + | tig0025511:9676-9695 | None:intergenic | 40.0% | |
| CCTCATAGTTACGATTTCTC+GGG | + | tig0025511:9677-9696 | None:intergenic | 40.0% | |
| CCCTCATAGTTACGATTTCT+CGG | + | tig0025511:9678-9697 | None:intergenic | 40.0% | |
| CCGAGAAATCGTAACTATGA+GGG | - | tig0025511:9675-9694 | Msa1423040:intron | 40.0% | |
| CGAGAAATCGTAACTATGAG+GGG | - | tig0025511:9676-9695 | Msa1423040:intron | 40.0% | |
| CTTTCTCCTCTGATAGGATT+CGG | + | tig0025511:9837-9856 | None:intergenic | 40.0% | |
| CTTTCTCTTTCTCCTCTGAT+AGG | + | tig0025511:9843-9862 | None:intergenic | 40.0% | |
| GGAGAGCTAGAATAGAACAA+TGG | - | tig0025511:9874-9893 | Msa1423040:intron | 40.0% | |
| AGTTGGAGATTCTGGTAACA+AGG | - | tig0025511:9911-9930 | Msa1423040:CDS | 40.0% | |
| TTACAGGGTCTTCTCACTTT+GGG | + | tig0025511:10030-10049 | None:intergenic | 40.0% | |
| ATTACAGGGTCTTCTCACTT+TGG | + | tig0025511:10031-10050 | None:intergenic | 40.0% | |
| TGTTCGATGGTAAACTCTGT+TGG | - | tig0025511:10209-10228 | Msa1423040:CDS | 40.0% | |
| AAACTCTGTTGGAGATTACC+TGG | - | tig0025511:10220-10239 | Msa1423040:CDS | 40.0% | |
| AACTCTGTTGGAGATTACCT+GGG | - | tig0025511:10221-10240 | Msa1423040:CDS | 40.0% | |
| AGATTACCTGGGTGAAATAG+AGG | - | tig0025511:10232-10251 | Msa1423040:CDS | 40.0% | |
| GATTACCTGGGTGAAATAGA+GGG | - | tig0025511:10233-10252 | Msa1423040:CDS | 40.0% | |
| GGCGAAACCCTAATAATCGA+TGG | - | tig0025511:7564-7583 | Msa1423040:three_prime_UTR | 45.0% | |
| ! | TGCTCCGCCATCGATTATTA+GGG | + | tig0025511:7574-7593 | None:intergenic | 45.0% |
| ! | ATGCTCCGCCATCGATTATT+AGG | + | tig0025511:7575-7594 | None:intergenic | 45.0% |
| GCTCCGATCTTGAAGTAGAA+TGG | + | tig0025511:7640-7659 | None:intergenic | 45.0% | |
| AAGATCGGAGCTTGTAGACA+TGG | - | tig0025511:7649-7668 | Msa1423040:three_prime_UTR | 45.0% | |
| TGGTATGAAGACGAGAACAG+CGG | + | tig0025511:7678-7697 | None:intergenic | 45.0% | |
| !! | AGTAGGACTAATGGTGGGTT+TGG | + | tig0025511:7698-7717 | None:intergenic | 45.0% |
| !! | TCAAGAGATTCAGGTTGAGG+TGG | + | tig0025511:7814-7833 | None:intergenic | 45.0% |
| TTTGAGGAGCTGAGCAAGTA+TGG | - | tig0025511:7959-7978 | Msa1423040:CDS | 45.0% | |
| AGATGGAGCAAACTAGGCTT+AGG | - | tig0025511:8541-8560 | Msa1423040:intron | 45.0% | |
| CAAACTAGGCTTAGGTGGTT+TGG | - | tig0025511:8549-8568 | Msa1423040:intron | 45.0% | |
| AGTGAGGAGAGTCAATCAGA+TGG | - | tig0025511:8602-8621 | Msa1423040:intron | 45.0% | |
| AGGAGAGTCAATCAGATGGA+AGG | - | tig0025511:8606-8625 | Msa1423040:intron | 45.0% | |
| GGTAGTCAAATCACTAGAGG+CGG | - | tig0025511:8627-8646 | Msa1423040:intron | 45.0% | |
| ! | CGATCCAACTCATTAGTCTC+TGG | + | tig0025511:8690-8709 | None:intergenic | 45.0% |
| TTAGCCAACCCCATTTAGTG+GGG | - | tig0025511:8753-8772 | Msa1423040:intron | 45.0% | |
| CCAAACCTTACCCCACTAAA+TGG | + | tig0025511:8766-8785 | None:intergenic | 45.0% | |
| CCATTTAGTGGGGTAAGGTT+TGG | - | tig0025511:8763-8782 | Msa1423040:intron | 45.0% | |
| TTGGACAGTAGCAGATGTAC+TGG | + | tig0025511:9039-9058 | None:intergenic | 45.0% | |
| TACAATTGTGGGTACCAGGA+AGG | + | tig0025511:9114-9133 | None:intergenic | 45.0% | |
| AATGTCAGTAGCAATGAGCG+AGG | + | tig0025511:9335-9354 | None:intergenic | 45.0% | |
| GCTTCTCGAAAATCCGTAAC+AGG | + | tig0025511:9408-9427 | None:intergenic | 45.0% | |
| GAGAATGTATGCAATCGAGG+TGG | - | tig0025511:9447-9466 | Msa1423040:intron | 45.0% | |
| TTGGAAGAAGTAGTAGGCGT+TGG | - | tig0025511:9619-9638 | Msa1423040:intron | 45.0% | |
| CATAGTTACGATTTCTCGGG+GGG | + | tig0025511:9674-9693 | None:intergenic | 45.0% | |
| CCCGAGAAATCGTAACTATG+AGG | - | tig0025511:9674-9693 | Msa1423040:intron | 45.0% | |
| AATCCCTTCTACCAGAACCA+CGG | + | tig0025511:9716-9735 | None:intergenic | 45.0% | |
| !! | TGGTTCTGGTAGAAGGGATT+TGG | - | tig0025511:9716-9735 | Msa1423040:intron | 45.0% |
| AGAACAATGGAACAGGGAGA+AGG | - | tig0025511:9887-9906 | Msa1423040:intron | 45.0% | |
| GAGAAGGAAGTTGGAGATTC+TGG | - | tig0025511:9903-9922 | Msa1423040:CDS | 45.0% | |
| !!! | CAGACTCGCTGCCATTTTTT+AGG | + | tig0025511:9971-9990 | None:intergenic | 45.0% |
| CTAAAAAATGGCAGCGAGTC+TGG | - | tig0025511:9969-9988 | Msa1423040:intron | 45.0% | |
| AGTTAACGGAAGAAGTGAGG+AGG | - | tig0025511:10369-10388 | Msa1423040:five_prime_UTR | 45.0% | |
| !!! | TTGATTTTTTTTTTTTTTTT+AGG | - | tig0025511:7919-7938 | Msa1423040:CDS | 5.0% |
| TGAGGAGGTTGAGGTTGTTG+AGG | + | tig0025511:7790-7809 | None:intergenic | 50.0% | |
| !! | GATTCAGGTTGAGGTGGTTG+AGG | + | tig0025511:7808-7827 | None:intergenic | 50.0% |
| !! | GGGTCAAGAGATTCAGGTTG+AGG | + | tig0025511:7817-7836 | None:intergenic | 50.0% |
| TGGAGCAAACTAGGCTTAGG+TGG | - | tig0025511:8544-8563 | Msa1423040:intron | 50.0% | |
| AGTCAAATCACTAGAGGCGG+AGG | - | tig0025511:8630-8649 | Msa1423040:intron | 50.0% | |
| CTTACCCCACTAAATGGGGT+TGG | + | tig0025511:8760-8779 | None:intergenic | 50.0% | |
| CAACCCCATTTAGTGGGGTA+AGG | - | tig0025511:8758-8777 | Msa1423040:intron | 50.0% | |
| ACCTTGTGCTCTGTCACACA+TGG | - | tig0025511:8997-9016 | Msa1423040:intron | 50.0% | |
| ACCATGTGTGACAGAGCACA+AGG | + | tig0025511:9001-9020 | None:intergenic | 50.0% | |
| !! | TATGAGGGGCGTTCGTATTC+TGG | - | tig0025511:9690-9709 | Msa1423040:intron | 50.0% |
| CTGGTAGAAGGGATTTGGAC+AGG | - | tig0025511:9721-9740 | Msa1423040:CDS | 50.0% | |
| AGGGATTTGGACAGGTCTCA+TGG | - | tig0025511:9729-9748 | Msa1423040:CDS | 50.0% | |
| ! | GCTTCTTGGCCTTCTACCAT+GGG | + | tig0025511:9757-9776 | None:intergenic | 50.0% |
| TTCCTCTATGCCGAGGACTA+CGG | + | tig0025511:9779-9798 | None:intergenic | 50.0% | |
| AAGGCGGAGTAGAAGTCCAA+TGG | - | tig0025511:9797-9816 | Msa1423040:intron | 50.0% | |
| AGGCGGAGTAGAAGTCCAAT+GGG | - | tig0025511:9798-9817 | Msa1423040:intron | 50.0% | |
| GAAGTCCAATGGGAAGAGAC+AGG | - | tig0025511:9808-9827 | Msa1423040:intron | 50.0% | |
| AGGAGTCCGAATCCTATCAG+AGG | - | tig0025511:9828-9847 | Msa1423040:intron | 50.0% | |
| TGGAACAGGGAGAAGGAAGT+TGG | - | tig0025511:9894-9913 | Msa1423040:intron | 50.0% | |
| GAAGAGGCGGGCCTAAAAAA+TGG | - | tig0025511:9957-9976 | Msa1423040:CDS | 50.0% | |
| GAAAGGGGTTCGTGAGAGAG+TGG | - | tig0025511:7543-7562 | Msa1423040:three_prime_UTR | 55.0% | |
| TGAGGTGGTTGAGGAGGTTG+AGG | + | tig0025511:7799-7818 | None:intergenic | 55.0% | |
| !! | TCAGGTTGAGGTGGTTGAGG+AGG | + | tig0025511:7805-7824 | None:intergenic | 55.0% |
| !! | AGGCGTTGGAATGACCGTAG+TGG | - | tig0025511:9633-9652 | Msa1423040:intron | 55.0% |
| ! | ACCGTAGTGGAAGCAGAAGC+CGG | - | tig0025511:9646-9665 | Msa1423040:intron | 55.0% |
| TCCGGCTTCTGCTTCCACTA+CGG | + | tig0025511:9650-9669 | None:intergenic | 55.0% | |
| TCGTATTCTGGCCGTGGTTC+TGG | - | tig0025511:9702-9721 | Msa1423040:intron | 55.0% | |
| !! | TGGCCGTGGTTCTGGTAGAA+GGG | - | tig0025511:9710-9729 | Msa1423040:intron | 55.0% |
| CTCATGGCTCCCATGGTAGA+AGG | - | tig0025511:9745-9764 | Msa1423040:CDS | 55.0% | |
| ! | GGCTTCTTGGCCTTCTACCA+TGG | + | tig0025511:9758-9777 | None:intergenic | 55.0% |
| GTAGTCCTCGGCATAGAGGA+AGG | - | tig0025511:9778-9797 | Msa1423040:CDS | 55.0% | |
| GGACTCCTGTCTCTTCCCAT+TGG | + | tig0025511:9816-9835 | None:intergenic | 55.0% | |
| CGGTTCCCTCTATTTCACCC+AGG | + | tig0025511:10241-10260 | None:intergenic | 55.0% | |
| TACGATTTCTCGGGGGGCTC+CGG | + | tig0025511:9668-9687 | None:intergenic | 60.0% | |
| !! | CTGGCCGTGGTTCTGGTAGA+AGG | - | tig0025511:9709-9728 | Msa1423040:intron | 60.0% |
| GACAGGTCTCATGGCTCCCA+TGG | - | tig0025511:9738-9757 | Msa1423040:CDS | 60.0% | |
| GGCCAAGAAGCCGTAGTCCT+CGG | - | tig0025511:9766-9785 | Msa1423040:CDS | 60.0% | |
| TGCCGAGGACTACGGCTTCT+TGG | + | tig0025511:9771-9790 | None:intergenic | 60.0% | |
| AGCCGTAGTCCTCGGCATAG+AGG | - | tig0025511:9774-9793 | Msa1423040:CDS | 60.0% | |
| GTCCTCGGCATAGAGGAAGG+CGG | - | tig0025511:9781-9800 | Msa1423040:CDS | 60.0% | |
| GGGCGTTCGTATTCTGGCCG+TGG | - | tig0025511:9696-9715 | Msa1423040:intron | 65.0% | |
| CTCCGCCTTCCTCTATGCCG+AGG | + | tig0025511:9786-9805 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025511 | gene | 7496 | 10426 | 7496 | ID=Msa1423040;Name=Msa1423040 |
| tig0025511 | mRNA | 7496 | 10426 | 7496 | ID=Msa1423040-mRNA-1;Parent=Msa1423040;Name=Msa1423040-mRNA-1;_AED=0.18;_eAED=0.18;_QI=87|1|1|1|1|1|5|419|327 |
| tig0025511 | exon | 7496 | 8323 | 7496 | ID=Msa1423040-mRNA-1:exon:3049;Parent=Msa1423040-mRNA-1 |
| tig0025511 | exon | 8417 | 8543 | 8417 | ID=Msa1423040-mRNA-1:exon:3048;Parent=Msa1423040-mRNA-1 |
| tig0025511 | exon | 9719 | 9800 | 9719 | ID=Msa1423040-mRNA-1:exon:3047;Parent=Msa1423040-mRNA-1 |
| tig0025511 | exon | 9895 | 9981 | 9895 | ID=Msa1423040-mRNA-1:exon:3046;Parent=Msa1423040-mRNA-1 |
| tig0025511 | exon | 10061 | 10426 | 10061 | ID=Msa1423040-mRNA-1:exon:3045;Parent=Msa1423040-mRNA-1 |
| tig0025511 | five_prime_UTR | 10340 | 10426 | 10340 | ID=Msa1423040-mRNA-1:five_prime_utr;Parent=Msa1423040-mRNA-1 |
| tig0025511 | CDS | 10061 | 10339 | 10061 | ID=Msa1423040-mRNA-1:cds;Parent=Msa1423040-mRNA-1 |
| tig0025511 | CDS | 9895 | 9981 | 9895 | ID=Msa1423040-mRNA-1:cds;Parent=Msa1423040-mRNA-1 |
| tig0025511 | CDS | 9719 | 9800 | 9719 | ID=Msa1423040-mRNA-1:cds;Parent=Msa1423040-mRNA-1 |
| tig0025511 | CDS | 8417 | 8543 | 8417 | ID=Msa1423040-mRNA-1:cds;Parent=Msa1423040-mRNA-1 |
| tig0025511 | CDS | 7915 | 8323 | 7915 | ID=Msa1423040-mRNA-1:cds;Parent=Msa1423040-mRNA-1 |
| tig0025511 | three_prime_UTR | 7496 | 7914 | 7496 | ID=Msa1423040-mRNA-1:three_prime_utr;Parent=Msa1423040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
