Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167350 | XP_013450093.1 | 98.777 | 327 | 4 | 0 | 1 | 327 | 1 | 327 | 0.0 | 670 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167350 | sp|Q9FMY5|U2AFB_ARATH | 64.026 | 303 | 83 | 5 | 1 | 298 | 1 | 282 | 2.74e-114 | 335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167350 | A0A072U424 | 98.777 | 327 | 4 | 0 | 1 | 327 | 1 | 327 | 0.0 | 670 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094600 | Msa1167350 | 0.806961 | 6.380078e-50 | -8.615850e-47 |
| Msa0709390 | Msa1167350 | 0.978409 | 9.146580e-146 | -8.615850e-47 |
| Msa1041840 | Msa1167350 | 0.976110 | 3.334368e-141 | -8.615850e-47 |
| Msa1124970 | Msa1167350 | 0.986776 | 6.248756e-168 | -8.615850e-47 |
| Msa1167350 | Msa1423040 | 0.987035 | 7.908531e-169 | -8.615850e-47 |
| Msa0880030 | Msa1167350 | 0.900699 | 5.638013e-78 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167350 | MtrunA17_Chr7g0265751 | 98.777 | 327 | 4 | 0 | 1 | 327 | 1 | 327 | 0.0 | 670 |
| Msa1167350 | MtrunA17_Chr2g0320801 | 60.377 | 318 | 87 | 4 | 1 | 305 | 1 | 292 | 8.14e-119 | 345 |
| Msa1167350 | MtrunA17_Chr1g0162821 | 72.362 | 199 | 41 | 2 | 1 | 199 | 1 | 185 | 1.26e-106 | 312 |
| Msa1167350 | MtrunA17_Chr2g0276901 | 37.755 | 98 | 58 | 1 | 92 | 186 | 28 | 125 | 5.28e-18 | 84.7 |
| Msa1167350 | MtrunA17_Chr2g0276891 | 55.102 | 49 | 22 | 0 | 9 | 57 | 184 | 232 | 2.88e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167350 | AT5G42820.1 | 64.026 | 303 | 83 | 5 | 1 | 298 | 1 | 282 | 2.79e-115 | 335 |
| Msa1167350 | AT5G42820.2 | 64.026 | 303 | 83 | 5 | 1 | 298 | 1 | 282 | 2.79e-115 | 335 |
| Msa1167350 | AT1G27650.1 | 65.461 | 304 | 74 | 7 | 1 | 292 | 1 | 285 | 5.07e-113 | 330 |
| Msa1167350 | AT1G27650.2 | 59.843 | 254 | 71 | 7 | 51 | 292 | 1 | 235 | 1.92e-73 | 227 |
| Msa1167350 | AT1G10320.2 | 34.426 | 183 | 97 | 3 | 9 | 186 | 228 | 392 | 1.51e-34 | 134 |
| Msa1167350 | AT1G10320.1 | 34.426 | 183 | 97 | 3 | 9 | 186 | 237 | 401 | 1.69e-34 | 134 |
| Msa1167350 | AT3G44785.1 | 65.753 | 73 | 24 | 1 | 1 | 73 | 1 | 72 | 3.90e-29 | 107 |
Find 124 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATATTTCATTTCTGTATT+TGG | 0.102491 | 7_4:-59798937 | Msa1167350:three_prime_UTR |
| ATGCTCCGCCATCGATTATT+AGG | 0.132506 | 7_4:+59801555 | None:intergenic |
| TAAGAGATGTGAAACAATTT+TGG | 0.157960 | 7_4:-59798831 | Msa1167350:three_prime_UTR |
| AAGTGTTCTTGGAGTTTATC+AGG | 0.235787 | 7_4:+59801292 | None:intergenic |
| TATGAGGGGCGTTCGTATTC+TGG | 0.248763 | 7_4:-59799428 | Msa1167350:CDS |
| CTTGAATATTTGTGACAATT+TGG | 0.267256 | 7_4:-59801124 | Msa1167350:CDS |
| GATTTGAGGAAGCGATTATT+TGG | 0.276417 | 7_4:-59799518 | Msa1167350:CDS |
| TTATCAGGGTCAAGAGATTC+AGG | 0.286148 | 7_4:+59801307 | None:intergenic |
| TGCCGAGGACTACGGCTTCT+TGG | 0.303158 | 7_4:+59799350 | None:intergenic |
| TACATACATCGAAGTGTTCT+TGG | 0.310686 | 7_4:+59801281 | None:intergenic |
| TCGTATTCTGGCCGTGGTTC+TGG | 0.312884 | 7_4:-59799416 | Msa1167350:CDS |
| TTACTTGCAGAAATTATTAC+AGG | 0.313162 | 7_4:+59799075 | None:intergenic |
| AATAATTTCTGCAAGTAATC+TGG | 0.317375 | 7_4:-59799070 | Msa1167350:three_prime_UTR |
| GAGAAGGAAGTTGGAGATTC+TGG | 0.338699 | 7_4:-59799215 | Msa1167350:CDS |
| TGAGGTTGTTGAGGTTGATT+AGG | 0.344172 | 7_4:+59801349 | None:intergenic |
| TTACAGGGTCTTCTCACTTT+GGG | 0.346064 | 7_4:+59799091 | None:intergenic |
| CATTCAGAAGATCCACATAA+TGG | 0.347291 | 7_4:+59798711 | None:intergenic |
| GAGCATTTAGCATCGATATT+CGG | 0.354185 | 7_4:-59801538 | Msa1167350:CDS |
| CTTTCTCTTTCTCCTCTGAT+AGG | 0.355688 | 7_4:+59799278 | None:intergenic |
| TGAGGTGGTTGAGGAGGTTG+AGG | 0.362652 | 7_4:+59801331 | None:intergenic |
| TGCTCCGCCATCGATTATTA+GGG | 0.367053 | 7_4:+59801556 | None:intergenic |
| CTTTCTCCTCTGATAGGATT+CGG | 0.367164 | 7_4:+59799284 | None:intergenic |
| TGGTTCTGGTAGAAGGGATT+TGG | 0.369893 | 7_4:-59799402 | Msa1167350:CDS |
| CCCTCATAGTTACGATTTCT+CGG | 0.370767 | 7_4:+59799443 | None:intergenic |
| CTGGCCGTGGTTCTGGTAGA+AGG | 0.372740 | 7_4:-59799409 | Msa1167350:CDS |
| GATTCAGGTTGAGGTGGTTG+AGG | 0.376296 | 7_4:+59801322 | None:intergenic |
| ATAAAGTTAAGGTTCATATC+AGG | 0.384960 | 7_4:+59801382 | None:intergenic |
| TTTGAGGAGCTGAGCAAGTA+TGG | 0.394906 | 7_4:-59801159 | Msa1167350:CDS |
| GAGTAGGATTGATAAAGTTA+AGG | 0.396234 | 7_4:+59801371 | None:intergenic |
| GGCTTCTTGGCCTTCTACCA+TGG | 0.400878 | 7_4:+59799363 | None:intergenic |
| CTAGAATAGAACAATGGAAC+AGG | 0.401571 | 7_4:-59799238 | Msa1167350:CDS |
| TGTTGACTTCTCTCCTGTTA+CGG | 0.406173 | 7_4:-59799726 | Msa1167350:CDS |
| GCTTCTCGAAAATCCGTAAC+AGG | 0.408045 | 7_4:+59799713 | None:intergenic |
| ATTACAGGGTCTTCTCACTT+TGG | 0.418323 | 7_4:+59799090 | None:intergenic |
| AAAACTACAGCCAACTCAAT+AGG | 0.421667 | 7_4:+59799032 | None:intergenic |
| TGACAATTTGGCTGATCATA+TGG | 0.424836 | 7_4:-59801112 | Msa1167350:intron |
| ATTCAGAAGATCCACATAAT+GGG | 0.425677 | 7_4:+59798712 | None:intergenic |
| AGTAGGACTAATGGTGGGTT+TGG | 0.429071 | 7_4:+59801432 | None:intergenic |
| AACATAAATAAATCTCGAAA+GGG | 0.429853 | 7_4:-59801600 | Msa1167350:five_prime_UTR |
| CTCATGGCTCCCATGGTAGA+AGG | 0.441236 | 7_4:-59799373 | Msa1167350:CDS |
| AATCACTATAAAATAGTTAA+CGG | 0.444979 | 7_4:-59798763 | Msa1167350:three_prime_UTR |
| TGTTGAGGTTGATTAGGAGT+AGG | 0.451883 | 7_4:+59801355 | None:intergenic |
| CCTTTGATTTCAGAGATTTG+AGG | 0.452267 | 7_4:-59799532 | Msa1167350:intron |
| GATTATTTGGAAGAAGTAGT+AGG | 0.454782 | 7_4:-59799505 | Msa1167350:CDS |
| CCTCATAGTTACGATTTCTC+GGG | 0.458427 | 7_4:+59799444 | None:intergenic |
| TGCATCTAAAGAAGATTAGC+AGG | 0.461797 | 7_4:-59799634 | Msa1167350:intron |
| AGATTACCTGGGTGAAATAG+AGG | 0.463565 | 7_4:-59798886 | Msa1167350:three_prime_UTR |
| CCCGAGAAATCGTAACTATG+AGG | 0.480351 | 7_4:-59799444 | Msa1167350:CDS |
| TCAGGTTGAGGTGGTTGAGG+AGG | 0.483616 | 7_4:+59801325 | None:intergenic |
| AAAGAGAAAGTAGTGTAGAA+AGG | 0.483749 | 7_4:-59799265 | Msa1167350:CDS |
| TGGAACAGGGAGAAGGAAGT+TGG | 0.485919 | 7_4:-59799224 | Msa1167350:CDS |
| GGAGAGAAGTCAACAATGAT+TGG | 0.494146 | 7_4:+59799734 | None:intergenic |
| GGACTCCTGTCTCTTCCCAT+TGG | 0.497688 | 7_4:+59799305 | None:intergenic |
| AAACTCTGTTGGAGATTACC+TGG | 0.498335 | 7_4:-59798898 | Msa1167350:three_prime_UTR |
| GCTCCGATCTTGAAGTAGAA+TGG | 0.500982 | 7_4:+59801490 | None:intergenic |
| CTCATAGTTACGATTTCTCG+GGG | 0.504601 | 7_4:+59799445 | None:intergenic |
| CTGGTAGAAGGGATTTGGAC+AGG | 0.507028 | 7_4:-59799397 | Msa1167350:CDS |
| GGCCAAGAAGCCGTAGTCCT+CGG | 0.507965 | 7_4:-59799352 | Msa1167350:CDS |
| TGAGGAGGTTGAGGTTGTTG+AGG | 0.510776 | 7_4:+59801340 | None:intergenic |
| GCTTCTTGGCCTTCTACCAT+GGG | 0.511138 | 7_4:+59799364 | None:intergenic |
| GGGTCAAGAGATTCAGGTTG+AGG | 0.514083 | 7_4:+59801313 | None:intergenic |
| GGGCGTTCGTATTCTGGCCG+TGG | 0.515780 | 7_4:-59799422 | Msa1167350:CDS |
| TTGGAAGAAGTAGTAGGCGT+TGG | 0.517691 | 7_4:-59799499 | Msa1167350:CDS |
| GACAGGTCTCATGGCTCCCA+TGG | 0.524520 | 7_4:-59799380 | Msa1167350:CDS |
| TTAGTTTGCACCTATTGAGT+TGG | 0.528104 | 7_4:-59799042 | Msa1167350:three_prime_UTR |
| GAGAACAAGAGTAGGACTAA+TGG | 0.530039 | 7_4:+59801423 | None:intergenic |
| AGGCGGAGTAGAAGTCCAAT+GGG | 0.531064 | 7_4:-59799320 | Msa1167350:CDS |
| ATCAGGACGTTGATACATGT+TGG | 0.531267 | 7_4:+59801399 | None:intergenic |
| GAAGTCCAATGGGAAGAGAC+AGG | 0.531891 | 7_4:-59799310 | Msa1167350:CDS |
| TGTATATGTTCAGTATAAAG+AGG | 0.534599 | 7_4:-59800988 | Msa1167350:CDS |
| ACCGTAGTGGAAGCAGAAGC+CGG | 0.541010 | 7_4:-59799472 | Msa1167350:CDS |
| AGAAAATCTGACCCATTATG+TGG | 0.543064 | 7_4:-59798723 | Msa1167350:three_prime_UTR |
| CAACATAAATAAATCTCGAA+AGG | 0.544906 | 7_4:-59801601 | Msa1167350:five_prime_UTR |
| TGTTCGATGGTAAACTCTGT+TGG | 0.545340 | 7_4:-59798909 | Msa1167350:three_prime_UTR |
| TCCGGCTTCTGCTTCCACTA+CGG | 0.545385 | 7_4:+59799471 | None:intergenic |
| TGGCCGTGGTTCTGGTAGAA+GGG | 0.546507 | 7_4:-59799408 | Msa1167350:CDS |
| CCGAGAAATCGTAACTATGA+GGG | 0.550258 | 7_4:-59799443 | Msa1167350:CDS |
| AATAGTTAACGGAAGAAGTG+AGG | 0.560146 | 7_4:-59798752 | Msa1167350:three_prime_UTR |
| AGGGATTTGGACAGGTCTCA+TGG | 0.560557 | 7_4:-59799389 | Msa1167350:CDS |
| AGTGTTCTTGGAGTTTATCA+GGG | 0.562952 | 7_4:+59801293 | None:intergenic |
| AACAATGATTATGAAGAGGC+GGG | 0.563713 | 7_4:-59799173 | Msa1167350:CDS |
| TTCCTCTATGCCGAGGACTA+CGG | 0.567765 | 7_4:+59799342 | None:intergenic |
| AATGCTCTTATGAATCTCAC+TGG | 0.570244 | 7_4:-59800951 | Msa1167350:CDS |
| TGTCCATTCTACTTCAAGAT+CGG | 0.570630 | 7_4:-59801493 | Msa1167350:CDS |
| AAGGCGGAGTAGAAGTCCAA+TGG | 0.574467 | 7_4:-59799321 | Msa1167350:CDS |
| AGCCGTAGTCCTCGGCATAG+AGG | 0.581691 | 7_4:-59799344 | Msa1167350:CDS |
| AGAACAATGGAACAGGGAGA+AGG | 0.596602 | 7_4:-59799231 | Msa1167350:CDS |
| ATTTGCAACAGAACAAAGGA+AGG | 0.601935 | 7_4:+59798783 | None:intergenic |
| TCATAAGAGCATTAGCAGCA+TGG | 0.602037 | 7_4:+59800961 | None:intergenic |
| GTAGTCCTCGGCATAGAGGA+AGG | 0.603594 | 7_4:-59799340 | Msa1167350:CDS |
| GAAAGGGGTTCGTGAGAGAG+TGG | 0.603769 | 7_4:-59801584 | Msa1167350:five_prime_UTR |
| TAACAATGATTATGAAGAGG+CGG | 0.605105 | 7_4:-59799174 | Msa1167350:CDS |
| GATTACCTGGGTGAAATAGA+GGG | 0.605497 | 7_4:-59798885 | Msa1167350:three_prime_UTR |
| AGAAGTCAACAATGATTGGT+CGG | 0.606403 | 7_4:+59799738 | None:intergenic |
| CATAGTTACGATTTCTCGGG+GGG | 0.607441 | 7_4:+59799447 | None:intergenic |
| AGTGATTTGCAACAGAACAA+AGG | 0.611402 | 7_4:+59798779 | None:intergenic |
| GGCGAAACCCTAATAATCGA+TGG | 0.614459 | 7_4:-59801563 | Msa1167350:exon |
| AACAAGAGTAGGACTAATGG+TGG | 0.614682 | 7_4:+59801426 | None:intergenic |
| TCAAGAGATTCAGGTTGAGG+TGG | 0.615585 | 7_4:+59801316 | None:intergenic |
| AAGATCGGAGCTTGTAGACA+TGG | 0.618937 | 7_4:-59801478 | Msa1167350:CDS |
| CTCCGCCTTCCTCTATGCCG+AGG | 0.622022 | 7_4:+59799335 | None:intergenic |
| GTATTTGGATGAATGTTCGA+TGG | 0.623654 | 7_4:-59798922 | Msa1167350:three_prime_UTR |
| AGTTAACGGAAGAAGTGAGG+AGG | 0.623894 | 7_4:-59798749 | Msa1167350:three_prime_UTR |
| GAGTAACAATGATTATGAAG+AGG | 0.626539 | 7_4:-59799177 | Msa1167350:CDS |
| AGTTGGAGATTCTGGTAACA+AGG | 0.630652 | 7_4:-59799207 | Msa1167350:CDS |
| AGGAGTCCGAATCCTATCAG+AGG | 0.630679 | 7_4:-59799290 | Msa1167350:CDS |
| AACTCTGTTGGAGATTACCT+GGG | 0.633510 | 7_4:-59798897 | Msa1167350:three_prime_UTR |
| CGAGAAATCGTAACTATGAG+GGG | 0.636005 | 7_4:-59799442 | Msa1167350:CDS |
| GAAGAGAATGTATGCAATCG+AGG | 0.636366 | 7_4:-59799674 | Msa1167350:CDS |
| ACATAAATAAATCTCGAAAG+GGG | 0.642552 | 7_4:-59801599 | Msa1167350:five_prime_UTR |
| TACTTGCAGAAATTATTACA+GGG | 0.643592 | 7_4:+59799076 | None:intergenic |
| ATGTTGGAGAGAACAAGAGT+AGG | 0.650220 | 7_4:+59801415 | None:intergenic |
| TCATAGTTACGATTTCTCGG+GGG | 0.654148 | 7_4:+59799446 | None:intergenic |
| GGAGAGCTAGAATAGAACAA+TGG | 0.656515 | 7_4:-59799244 | Msa1167350:CDS |
| GCATAGTTGAAATTCAAACA+CGG | 0.660584 | 7_4:+59798860 | None:intergenic |
| CGGCTCCCTCTATTTCACCC+AGG | 0.683486 | 7_4:+59798880 | None:intergenic |
| AGGCGTTGGAATGACCGTAG+TGG | 0.684717 | 7_4:-59799485 | Msa1167350:CDS |
| TAGAATAGAACAATGGAACA+GGG | 0.687714 | 7_4:-59799237 | Msa1167350:CDS |
| AATCCCTTCTACCAGAACCA+CGG | 0.694334 | 7_4:+59799405 | None:intergenic |
| ACAAGAGTAGGACTAATGGT+GGG | 0.704223 | 7_4:+59801427 | None:intergenic |
| GAAACCCTAATAATCGATGG+CGG | 0.712302 | 7_4:-59801560 | Msa1167350:exon |
| GAGAATGTATGCAATCGAGG+TGG | 0.723621 | 7_4:-59799671 | Msa1167350:CDS |
| GTCCTCGGCATAGAGGAAGG+CGG | 0.728288 | 7_4:-59799337 | Msa1167350:CDS |
| TGGTATGAAGACGAGAACAG+CGG | 0.740225 | 7_4:+59801452 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAAAATAAAAAATTGAA+GGG | + | chr7_4:59799112-59799131 | None:intergenic | 10.0% |
| !! | AAATCAAAATAAAAAATTGA+AGG | + | chr7_4:59799113-59799132 | None:intergenic | 10.0% |
| !! | AACAAAAATCATAAAAATTA+GGG | + | chr7_4:59799320-59799339 | None:intergenic | 10.0% |
| !! | AAACAAAAATCATAAAAATT+AGG | + | chr7_4:59799321-59799340 | None:intergenic | 10.0% |
| !!! | TATGATTTTTGTTTTTTTAT+AGG | - | chr7_4:59799327-59799346 | Msa1167350:CDS | 10.0% |
| !! | AATATATATATATGATGATT+TGG | - | chr7_4:59799463-59799482 | Msa1167350:CDS | 10.0% |
| !! | ATCAAAATAAAAAATTGAAG+GGG | + | chr7_4:59799111-59799130 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTTTTTTATAGGT+TGG | - | chr7_4:59799331-59799350 | Msa1167350:CDS | 15.0% |
| !! | AAAAAGAAAATTACAATTGT+GGG | + | chr7_4:59800352-59800371 | None:intergenic | 15.0% |
| !! | CAAATATTAATGATTATTTC+AGG | - | chr7_4:59800453-59800472 | Msa1167350:intron | 15.0% |
| !! | AATCACTATAAAATAGTTAA+CGG | - | chr7_4:59801582-59801601 | Msa1167350:five_prime_UTR | 15.0% |
| !! | AACATAAATAAATCTCGAAA+GGG | - | chr7_4:59798745-59798764 | Msa1167350:three_prime_UTR | 20.0% |
| !!! | TTTTTATGAAGATCTATTTG+AGG | - | chr7_4:59799170-59799189 | Msa1167350:CDS | 20.0% |
| !! | TTCATAAATCAAAAAGAGAA+AGG | + | chr7_4:59799273-59799292 | None:intergenic | 20.0% |
| !!! | TTTTTCTAAGACAAACTATT+AGG | - | chr7_4:59799883-59799902 | Msa1167350:intron | 20.0% |
| !! | TTTAGATTGAGATATTCAAT+TGG | - | chr7_4:59800090-59800109 | Msa1167350:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTCCTTCC+TGG | - | chr7_4:59800324-59800343 | Msa1167350:intron | 20.0% |
| !! | GAAAAAGAAAATTACAATTG+TGG | + | chr7_4:59800353-59800372 | None:intergenic | 20.0% |
| !!! | TATTAATGATTATTTCAGGT+AGG | - | chr7_4:59800457-59800476 | Msa1167350:intron | 20.0% |
| !!! | AAAAATTGAAAAGCATGAAT+AGG | + | chr7_4:59800754-59800773 | None:intergenic | 20.0% |
| ! | CAACATAAATAAATCTCGAA+AGG | - | chr7_4:59798744-59798763 | Msa1167350:three_prime_UTR | 25.0% |
| ! | ACATAAATAAATCTCGAAAG+GGG | - | chr7_4:59798746-59798765 | Msa1167350:three_prime_UTR | 25.0% |
| ! | ATAAAGTTAAGGTTCATATC+AGG | + | chr7_4:59798966-59798985 | None:intergenic | 25.0% |
| ! | CTTGAATATTTGTGACAATT+TGG | - | chr7_4:59799221-59799240 | Msa1167350:CDS | 25.0% |
| ! | TGTATATGTTCAGTATAAAG+AGG | - | chr7_4:59799357-59799376 | Msa1167350:CDS | 25.0% |
| !!! | TATATATGATGATTTGGTTG+TGG | - | chr7_4:59799469-59799488 | Msa1167350:CDS | 25.0% |
| ! | TTATTCAATTGTTTGTGCTT+TGG | - | chr7_4:59799505-59799524 | Msa1167350:CDS | 25.0% |
| ! | ACATGACATATATTGAAACA+TGG | + | chr7_4:59799569-59799588 | None:intergenic | 25.0% |
| !!! | CACTTGATTTATTTTTGTGT+TGG | + | chr7_4:59799640-59799659 | None:intergenic | 25.0% |
| ! | ACTAAAGGCAATATTCATAT+TGG | - | chr7_4:59800051-59800070 | Msa1167350:intron | 25.0% |
| ! | ATTGAGATATTCAATTGGTT+TGG | - | chr7_4:59800095-59800114 | Msa1167350:intron | 25.0% |
| !! | TTATCTGATGGAATGATTTT+TGG | - | chr7_4:59800193-59800212 | Msa1167350:intron | 25.0% |
| ! | TACTTGCAGAAATTATTACA+GGG | + | chr7_4:59801272-59801291 | None:intergenic | 25.0% |
| ! | TTACTTGCAGAAATTATTAC+AGG | + | chr7_4:59801273-59801292 | None:intergenic | 25.0% |
| ! | AATAATTTCTGCAAGTAATC+TGG | - | chr7_4:59801275-59801294 | Msa1167350:intron | 25.0% |
| ! | GGATATTTCATTTCTGTATT+TGG | - | chr7_4:59801408-59801427 | Msa1167350:CDS | 25.0% |
| !! | TAAGAGATGTGAAACAATTT+TGG | - | chr7_4:59801514-59801533 | Msa1167350:CDS | 25.0% |
| GAGTAGGATTGATAAAGTTA+AGG | + | chr7_4:59798977-59798996 | None:intergenic | 30.0% | |
| !!! | AGGTTCTGAATTTTGTAGTT+AGG | - | chr7_4:59799429-59799448 | Msa1167350:CDS | 30.0% |
| !!! | GGTTCTGAATTTTGTAGTTA+GGG | - | chr7_4:59799430-59799449 | Msa1167350:CDS | 30.0% |
| ! | CAACTTTAGAGAGATAGTTA+GGG | - | chr7_4:59799725-59799744 | Msa1167350:CDS | 30.0% |
| ! | TAATGAGTTGGATCGAAATT+TGG | - | chr7_4:59799920-59799939 | Msa1167350:intron | 30.0% |
| TGGTACATGATAGAACATTA+TGG | - | chr7_4:59799940-59799959 | Msa1167350:intron | 30.0% | |
| TGAATCCTTTGTGTAACTAA+AGG | - | chr7_4:59800036-59800055 | Msa1167350:intron | 30.0% | |
| TATTGCCTTTAGTTACACAA+AGG | + | chr7_4:59800044-59800063 | None:intergenic | 30.0% | |
| CAATAAAAGTGGGTACAATA+AGG | + | chr7_4:59800140-59800159 | None:intergenic | 30.0% | |
| !! | CTTATTGTACCCACTTTTAT+TGG | - | chr7_4:59800138-59800157 | Msa1167350:intron | 30.0% |
| !! | TGATGGAATGATTTTTGGAT+AGG | - | chr7_4:59800198-59800217 | Msa1167350:intron | 30.0% |
| !! | AATCTCTGAAATCAAAGGTA+AGG | + | chr7_4:59800811-59800830 | None:intergenic | 30.0% |
| GATTATTTGGAAGAAGTAGT+AGG | - | chr7_4:59800840-59800859 | Msa1167350:intron | 30.0% | |
| AAAGAGAAAGTAGTGTAGAA+AGG | - | chr7_4:59801080-59801099 | Msa1167350:intron | 30.0% | |
| TAGAATAGAACAATGGAACA+GGG | - | chr7_4:59801108-59801127 | Msa1167350:intron | 30.0% | |
| GAGTAACAATGATTATGAAG+AGG | - | chr7_4:59801168-59801187 | Msa1167350:CDS | 30.0% | |
| TAACAATGATTATGAAGAGG+CGG | - | chr7_4:59801171-59801190 | Msa1167350:CDS | 30.0% | |
| GCATAGTTGAAATTCAAACA+CGG | + | chr7_4:59801488-59801507 | None:intergenic | 30.0% | |
| ! | AACAATTTTGGATCGAATCA+TGG | - | chr7_4:59801526-59801545 | Msa1167350:CDS | 30.0% |
| !! | GAGCATTTAGCATCGATATT+CGG | - | chr7_4:59798807-59798826 | Msa1167350:three_prime_UTR | 35.0% |
| TGTCCATTCTACTTCAAGAT+CGG | - | chr7_4:59798852-59798871 | Msa1167350:three_prime_UTR | 35.0% | |
| AGTGTTCTTGGAGTTTATCA+GGG | + | chr7_4:59799055-59799074 | None:intergenic | 35.0% | |
| AAGTGTTCTTGGAGTTTATC+AGG | + | chr7_4:59799056-59799075 | None:intergenic | 35.0% | |
| ! | TACATACATCGAAGTGTTCT+TGG | + | chr7_4:59799067-59799086 | None:intergenic | 35.0% |
| TGACAATTTGGCTGATCATA+TGG | - | chr7_4:59799233-59799252 | Msa1167350:CDS | 35.0% | |
| AATGCTCTTATGAATCTCAC+TGG | - | chr7_4:59799394-59799413 | Msa1167350:CDS | 35.0% | |
| ! | CTCACTGGAAGATTTTATTC+AGG | - | chr7_4:59799409-59799428 | Msa1167350:CDS | 35.0% |
| TATATACGTTGAAACACGAG+TGG | + | chr7_4:59799605-59799624 | None:intergenic | 35.0% | |
| AGACTAGAGAGGATATGATT+AGG | - | chr7_4:59799697-59799716 | Msa1167350:CDS | 35.0% | |
| !! | CCTAACTATCTCTCTAAAGT+TGG | + | chr7_4:59799727-59799746 | None:intergenic | 35.0% |
| ! | CCAACTTTAGAGAGATAGTT+AGG | - | chr7_4:59799724-59799743 | Msa1167350:CDS | 35.0% |
| AGCACTTACAGTAGAAAAGA+TGG | - | chr7_4:59799749-59799768 | Msa1167350:intron | 35.0% | |
| TAGAAAAGATGGAGCAAACT+AGG | - | chr7_4:59799760-59799779 | Msa1167350:intron | 35.0% | |
| GACATGAGGATTAATTAGTG+AGG | - | chr7_4:59799811-59799830 | Msa1167350:intron | 35.0% | |
| TAAGAAGGGCCAATAAAAGT+GGG | + | chr7_4:59800150-59800169 | None:intergenic | 35.0% | |
| ACTCCCAAAATGAGTAAGAA+GGG | + | chr7_4:59800164-59800183 | None:intergenic | 35.0% | |
| ATTCCATCAGATAAAGCTCA+AGG | + | chr7_4:59800187-59800206 | None:intergenic | 35.0% | |
| AAATTACAATTGTGGGTACC+AGG | + | chr7_4:59800345-59800364 | None:intergenic | 35.0% | |
| AAGCAATGATAGACAATGCA+CGG | + | chr7_4:59800533-59800552 | None:intergenic | 35.0% | |
| TTGCTACTGACATTGTGATT+TGG | - | chr7_4:59800568-59800587 | Msa1167350:intron | 35.0% | |
| AGAAGTCAACAATGATTGGT+CGG | + | chr7_4:59800610-59800629 | None:intergenic | 35.0% | |
| !! | ATTTTCGAGAAGCTACTTGT+AGG | - | chr7_4:59800642-59800661 | Msa1167350:intron | 35.0% |
| TGCATCTAAAGAAGATTAGC+AGG | - | chr7_4:59800711-59800730 | Msa1167350:intron | 35.0% | |
| ! | AAAAGCATGAATAGGCTATG+TGG | + | chr7_4:59800746-59800765 | None:intergenic | 35.0% |
| !! | CCTCAAATCTCTGAAATCAA+AGG | + | chr7_4:59800816-59800835 | None:intergenic | 35.0% |
| ! | CCTTTGATTTCAGAGATTTG+AGG | - | chr7_4:59800813-59800832 | Msa1167350:intron | 35.0% |
| GATTTGAGGAAGCGATTATT+TGG | - | chr7_4:59800827-59800846 | Msa1167350:intron | 35.0% | |
| CTAGAATAGAACAATGGAAC+AGG | - | chr7_4:59801107-59801126 | Msa1167350:intron | 35.0% | |
| AACAATGATTATGAAGAGGC+GGG | - | chr7_4:59801172-59801191 | Msa1167350:CDS | 35.0% | |
| !! | TTAGTTTGCACCTATTGAGT+TGG | - | chr7_4:59801303-59801322 | Msa1167350:CDS | 35.0% |
| AAAACTACAGCCAACTCAAT+AGG | + | chr7_4:59801316-59801335 | None:intergenic | 35.0% | |
| !! | GTTTTGATATAGTTCAGCAG+TGG | - | chr7_4:59801387-59801406 | Msa1167350:CDS | 35.0% |
| GTATTTGGATGAATGTTCGA+TGG | - | chr7_4:59801423-59801442 | Msa1167350:CDS | 35.0% | |
| ATTTGCAACAGAACAAAGGA+AGG | + | chr7_4:59801565-59801584 | None:intergenic | 35.0% | |
| ! | AGTGATTTGCAACAGAACAA+AGG | + | chr7_4:59801569-59801588 | None:intergenic | 35.0% |
| AATAGTTAACGGAAGAAGTG+AGG | - | chr7_4:59801593-59801612 | Msa1167350:five_prime_UTR | 35.0% | |
| AGAAAATCTGACCCATTATG+TGG | - | chr7_4:59801622-59801641 | Msa1167350:five_prime_UTR | 35.0% | |
| GAAACCCTAATAATCGATGG+CGG | - | chr7_4:59798785-59798804 | Msa1167350:three_prime_UTR | 40.0% | |
| ACAAGAGTAGGACTAATGGT+GGG | + | chr7_4:59798921-59798940 | None:intergenic | 40.0% | |
| AACAAGAGTAGGACTAATGG+TGG | + | chr7_4:59798922-59798941 | None:intergenic | 40.0% | |
| GAGAACAAGAGTAGGACTAA+TGG | + | chr7_4:59798925-59798944 | None:intergenic | 40.0% | |
| ATGTTGGAGAGAACAAGAGT+AGG | + | chr7_4:59798933-59798952 | None:intergenic | 40.0% | |
| ATCAGGACGTTGATACATGT+TGG | + | chr7_4:59798949-59798968 | None:intergenic | 40.0% | |
| ! | TGTTGAGGTTGATTAGGAGT+AGG | + | chr7_4:59798993-59799012 | None:intergenic | 40.0% |
| ! | TGAGGTTGTTGAGGTTGATT+AGG | + | chr7_4:59798999-59799018 | None:intergenic | 40.0% |
| TTATCAGGGTCAAGAGATTC+AGG | + | chr7_4:59799041-59799060 | None:intergenic | 40.0% | |
| !! | TCATAAGAGCATTAGCAGCA+TGG | + | chr7_4:59799387-59799406 | None:intergenic | 40.0% |
| ! | GATGCGTGATCTGATAATGA+TGG | - | chr7_4:59799541-59799560 | Msa1167350:intron | 40.0% |
| AATCAAGTGTAGCAAAGACG+AGG | - | chr7_4:59799651-59799670 | Msa1167350:CDS | 40.0% | |
| ATCAAGTGTAGCAAAGACGA+GGG | - | chr7_4:59799652-59799671 | Msa1167350:CDS | 40.0% | |
| GGGTGTTAGCATTTGATGTA+TGG | - | chr7_4:59799672-59799691 | Msa1167350:CDS | 40.0% | |
| GATGTATGGTAAGACTAGAG+AGG | - | chr7_4:59799686-59799705 | Msa1167350:CDS | 40.0% | |
| ACATGTAGAGAGAAGACATG+AGG | - | chr7_4:59799797-59799816 | Msa1167350:intron | 40.0% | |
| GAAGGTAGTCAAATCACTAG+AGG | - | chr7_4:59799849-59799868 | Msa1167350:intron | 40.0% | |
| AGATCCAGAGACTAATGAGT+TGG | - | chr7_4:59799908-59799927 | Msa1167350:intron | 40.0% | |
| GTAAGAAGGGCCAATAAAAG+TGG | + | chr7_4:59800151-59800170 | None:intergenic | 40.0% | |
| ! | TTGGCCCTTCTTACTCATTT+TGG | - | chr7_4:59800157-59800176 | Msa1167350:intron | 40.0% |
| ! | TGGCCCTTCTTACTCATTTT+GGG | - | chr7_4:59800158-59800177 | Msa1167350:intron | 40.0% |
| GACTCCCAAAATGAGTAAGA+AGG | + | chr7_4:59800165-59800184 | None:intergenic | 40.0% | |
| ! | AGTCCTTGAGCTTTATCTGA+TGG | - | chr7_4:59800181-59800200 | Msa1167350:intron | 40.0% |
| ACAAGCAGTAAGGACAACAT+TGG | + | chr7_4:59800283-59800302 | None:intergenic | 40.0% | |
| TGCAAACAACACAAGCAGTA+AGG | + | chr7_4:59800293-59800312 | None:intergenic | 40.0% | |
| CTACCGAGTTCAGTATTGTT+TGG | - | chr7_4:59800390-59800409 | Msa1167350:intron | 40.0% | |
| CAGCCAAACAATACTGAACT+CGG | + | chr7_4:59800396-59800415 | None:intergenic | 40.0% | |
| AGTATTGTTTGGCTGAGATG+AGG | - | chr7_4:59800401-59800420 | Msa1167350:intron | 40.0% | |
| GATTTGGCTGTCATTCTTCT+AGG | - | chr7_4:59800584-59800603 | Msa1167350:intron | 40.0% | |
| GGAGAGAAGTCAACAATGAT+TGG | + | chr7_4:59800614-59800633 | None:intergenic | 40.0% | |
| !! | TGTTGACTTCTCTCCTGTTA+CGG | - | chr7_4:59800619-59800638 | Msa1167350:intron | 40.0% |
| GAAGAGAATGTATGCAATCG+AGG | - | chr7_4:59800671-59800690 | Msa1167350:intron | 40.0% | |
| TCATAGTTACGATTTCTCGG+GGG | + | chr7_4:59800902-59800921 | None:intergenic | 40.0% | |
| CTCATAGTTACGATTTCTCG+GGG | + | chr7_4:59800903-59800922 | None:intergenic | 40.0% | |
| CCTCATAGTTACGATTTCTC+GGG | + | chr7_4:59800904-59800923 | None:intergenic | 40.0% | |
| CCCTCATAGTTACGATTTCT+CGG | + | chr7_4:59800905-59800924 | None:intergenic | 40.0% | |
| CCGAGAAATCGTAACTATGA+GGG | - | chr7_4:59800902-59800921 | Msa1167350:intron | 40.0% | |
| CGAGAAATCGTAACTATGAG+GGG | - | chr7_4:59800903-59800922 | Msa1167350:intron | 40.0% | |
| CTTTCTCCTCTGATAGGATT+CGG | + | chr7_4:59801064-59801083 | None:intergenic | 40.0% | |
| CTTTCTCTTTCTCCTCTGAT+AGG | + | chr7_4:59801070-59801089 | None:intergenic | 40.0% | |
| GGAGAGCTAGAATAGAACAA+TGG | - | chr7_4:59801101-59801120 | Msa1167350:intron | 40.0% | |
| AGTTGGAGATTCTGGTAACA+AGG | - | chr7_4:59801138-59801157 | Msa1167350:CDS | 40.0% | |
| TTACAGGGTCTTCTCACTTT+GGG | + | chr7_4:59801257-59801276 | None:intergenic | 40.0% | |
| ATTACAGGGTCTTCTCACTT+TGG | + | chr7_4:59801258-59801277 | None:intergenic | 40.0% | |
| TGTTCGATGGTAAACTCTGT+TGG | - | chr7_4:59801436-59801455 | Msa1167350:CDS | 40.0% | |
| AAACTCTGTTGGAGATTACC+TGG | - | chr7_4:59801447-59801466 | Msa1167350:CDS | 40.0% | |
| AACTCTGTTGGAGATTACCT+GGG | - | chr7_4:59801448-59801467 | Msa1167350:CDS | 40.0% | |
| AGATTACCTGGGTGAAATAG+AGG | - | chr7_4:59801459-59801478 | Msa1167350:CDS | 40.0% | |
| GATTACCTGGGTGAAATAGA+GGG | - | chr7_4:59801460-59801479 | Msa1167350:CDS | 40.0% | |
| GGCGAAACCCTAATAATCGA+TGG | - | chr7_4:59798782-59798801 | Msa1167350:three_prime_UTR | 45.0% | |
| ! | TGCTCCGCCATCGATTATTA+GGG | + | chr7_4:59798792-59798811 | None:intergenic | 45.0% |
| ! | ATGCTCCGCCATCGATTATT+AGG | + | chr7_4:59798793-59798812 | None:intergenic | 45.0% |
| GCTCCGATCTTGAAGTAGAA+TGG | + | chr7_4:59798858-59798877 | None:intergenic | 45.0% | |
| AAGATCGGAGCTTGTAGACA+TGG | - | chr7_4:59798867-59798886 | Msa1167350:three_prime_UTR | 45.0% | |
| TGGTATGAAGACGAGAACAG+CGG | + | chr7_4:59798896-59798915 | None:intergenic | 45.0% | |
| !! | AGTAGGACTAATGGTGGGTT+TGG | + | chr7_4:59798916-59798935 | None:intergenic | 45.0% |
| !! | TCAAGAGATTCAGGTTGAGG+TGG | + | chr7_4:59799032-59799051 | None:intergenic | 45.0% |
| TTTGAGGAGCTGAGCAAGTA+TGG | - | chr7_4:59799186-59799205 | Msa1167350:CDS | 45.0% | |
| AGATGGAGCAAACTAGGCTT+AGG | - | chr7_4:59799766-59799785 | Msa1167350:intron | 45.0% | |
| CAAACTAGGCTTAGGTGGTT+TGG | - | chr7_4:59799774-59799793 | Msa1167350:intron | 45.0% | |
| AGTGAGGAGAGTCAATCAGA+TGG | - | chr7_4:59799827-59799846 | Msa1167350:intron | 45.0% | |
| AGGAGAGTCAATCAGATGGA+AGG | - | chr7_4:59799831-59799850 | Msa1167350:intron | 45.0% | |
| GGTAGTCAAATCACTAGAGG+CGG | - | chr7_4:59799852-59799871 | Msa1167350:intron | 45.0% | |
| ! | CGATCCAACTCATTAGTCTC+TGG | + | chr7_4:59799915-59799934 | None:intergenic | 45.0% |
| TCCATTTAGCCAACCCCATT+TGG | - | chr7_4:59799973-59799992 | Msa1167350:intron | 45.0% | |
| !! | ACCAAATGGGGTTGGCTAAA+TGG | + | chr7_4:59799977-59799996 | None:intergenic | 45.0% |
| ATTTAGCCAACCCCATTTGG+TGG | - | chr7_4:59799976-59799995 | Msa1167350:intron | 45.0% | |
| TTTAGCCAACCCCATTTGGT+GGG | - | chr7_4:59799977-59799996 | Msa1167350:intron | 45.0% | |
| AAACCTTACCCCACCAAATG+GGG | + | chr7_4:59799989-59800008 | None:intergenic | 45.0% | |
| CAAACCTTACCCCACCAAAT+GGG | + | chr7_4:59799990-59800009 | None:intergenic | 45.0% | |
| TTGGACAGTAGCAGATGTAC+TGG | + | chr7_4:59800264-59800283 | None:intergenic | 45.0% | |
| TACAATTGTGGGTACCAGGA+AGG | + | chr7_4:59800341-59800360 | None:intergenic | 45.0% | |
| AATGTCAGTAGCAATGAGCG+AGG | + | chr7_4:59800562-59800581 | None:intergenic | 45.0% | |
| GCTTCTCGAAAATCCGTAAC+AGG | + | chr7_4:59800635-59800654 | None:intergenic | 45.0% | |
| GAGAATGTATGCAATCGAGG+TGG | - | chr7_4:59800674-59800693 | Msa1167350:intron | 45.0% | |
| TTGGAAGAAGTAGTAGGCGT+TGG | - | chr7_4:59800846-59800865 | Msa1167350:intron | 45.0% | |
| CATAGTTACGATTTCTCGGG+GGG | + | chr7_4:59800901-59800920 | None:intergenic | 45.0% | |
| CCCGAGAAATCGTAACTATG+AGG | - | chr7_4:59800901-59800920 | Msa1167350:intron | 45.0% | |
| AATCCCTTCTACCAGAACCA+CGG | + | chr7_4:59800943-59800962 | None:intergenic | 45.0% | |
| !! | TGGTTCTGGTAGAAGGGATT+TGG | - | chr7_4:59800943-59800962 | Msa1167350:CDS | 45.0% |
| AGAACAATGGAACAGGGAGA+AGG | - | chr7_4:59801114-59801133 | Msa1167350:CDS | 45.0% | |
| GAGAAGGAAGTTGGAGATTC+TGG | - | chr7_4:59801130-59801149 | Msa1167350:CDS | 45.0% | |
| !!! | CAGACTCGCTGCCATTTTTT+AGG | + | chr7_4:59801198-59801217 | None:intergenic | 45.0% |
| CTAAAAAATGGCAGCGAGTC+TGG | - | chr7_4:59801196-59801215 | Msa1167350:intron | 45.0% | |
| AGTTAACGGAAGAAGTGAGG+AGG | - | chr7_4:59801596-59801615 | Msa1167350:five_prime_UTR | 45.0% | |
| !!! | GATTTTTTTTTTTTTTTTTT+AGG | - | chr7_4:59799146-59799165 | Msa1167350:CDS | 5.0% |
| TGAGGAGGTTGAGGTTGTTG+AGG | + | chr7_4:59799008-59799027 | None:intergenic | 50.0% | |
| !! | GATTCAGGTTGAGGTGGTTG+AGG | + | chr7_4:59799026-59799045 | None:intergenic | 50.0% |
| !! | GGGTCAAGAGATTCAGGTTG+AGG | + | chr7_4:59799035-59799054 | None:intergenic | 50.0% |
| TGGAGCAAACTAGGCTTAGG+TGG | - | chr7_4:59799769-59799788 | Msa1167350:intron | 50.0% | |
| AGTCAAATCACTAGAGGCGG+AGG | - | chr7_4:59799855-59799874 | Msa1167350:intron | 50.0% | |
| ! | TTAGCCAACCCCATTTGGTG+GGG | - | chr7_4:59799978-59799997 | Msa1167350:intron | 50.0% |
| CCAAACCTTACCCCACCAAA+TGG | + | chr7_4:59799991-59800010 | None:intergenic | 50.0% | |
| ! | CCATTTGGTGGGGTAAGGTT+TGG | - | chr7_4:59799988-59800007 | Msa1167350:intron | 50.0% |
| ACCTTGTGCTCTGTCACACA+TGG | - | chr7_4:59800222-59800241 | Msa1167350:intron | 50.0% | |
| ACCATGTGTGACAGAGCACA+AGG | + | chr7_4:59800226-59800245 | None:intergenic | 50.0% | |
| !! | TATGAGGGGCGTTCGTATTC+TGG | - | chr7_4:59800917-59800936 | Msa1167350:intron | 50.0% |
| CTGGTAGAAGGGATTTGGAC+AGG | - | chr7_4:59800948-59800967 | Msa1167350:CDS | 50.0% | |
| AGGGATTTGGACAGGTCTCA+TGG | - | chr7_4:59800956-59800975 | Msa1167350:CDS | 50.0% | |
| ! | GCTTCTTGGCCTTCTACCAT+GGG | + | chr7_4:59800984-59801003 | None:intergenic | 50.0% |
| TTCCTCTATGCCGAGGACTA+CGG | + | chr7_4:59801006-59801025 | None:intergenic | 50.0% | |
| AAGGCGGAGTAGAAGTCCAA+TGG | - | chr7_4:59801024-59801043 | Msa1167350:intron | 50.0% | |
| AGGCGGAGTAGAAGTCCAAT+GGG | - | chr7_4:59801025-59801044 | Msa1167350:intron | 50.0% | |
| GAAGTCCAATGGGAAGAGAC+AGG | - | chr7_4:59801035-59801054 | Msa1167350:intron | 50.0% | |
| AGGAGTCCGAATCCTATCAG+AGG | - | chr7_4:59801055-59801074 | Msa1167350:intron | 50.0% | |
| TGGAACAGGGAGAAGGAAGT+TGG | - | chr7_4:59801121-59801140 | Msa1167350:CDS | 50.0% | |
| GAAGAGGCGGGCCTAAAAAA+TGG | - | chr7_4:59801184-59801203 | Msa1167350:intron | 50.0% | |
| GAAAGGGGTTCGTGAGAGAG+TGG | - | chr7_4:59798761-59798780 | Msa1167350:three_prime_UTR | 55.0% | |
| TGAGGTGGTTGAGGAGGTTG+AGG | + | chr7_4:59799017-59799036 | None:intergenic | 55.0% | |
| !! | TCAGGTTGAGGTGGTTGAGG+AGG | + | chr7_4:59799023-59799042 | None:intergenic | 55.0% |
| CTTACCCCACCAAATGGGGT+TGG | + | chr7_4:59799985-59800004 | None:intergenic | 55.0% | |
| ! | CAACCCCATTTGGTGGGGTA+AGG | - | chr7_4:59799983-59800002 | Msa1167350:intron | 55.0% |
| !! | AGGCGTTGGAATGACCGTAG+TGG | - | chr7_4:59800860-59800879 | Msa1167350:intron | 55.0% |
| ! | ACCGTAGTGGAAGCAGAAGC+CGG | - | chr7_4:59800873-59800892 | Msa1167350:intron | 55.0% |
| TCCGGCTTCTGCTTCCACTA+CGG | + | chr7_4:59800877-59800896 | None:intergenic | 55.0% | |
| TCGTATTCTGGCCGTGGTTC+TGG | - | chr7_4:59800929-59800948 | Msa1167350:intron | 55.0% | |
| !! | TGGCCGTGGTTCTGGTAGAA+GGG | - | chr7_4:59800937-59800956 | Msa1167350:CDS | 55.0% |
| CTCATGGCTCCCATGGTAGA+AGG | - | chr7_4:59800972-59800991 | Msa1167350:CDS | 55.0% | |
| ! | GGCTTCTTGGCCTTCTACCA+TGG | + | chr7_4:59800985-59801004 | None:intergenic | 55.0% |
| GTAGTCCTCGGCATAGAGGA+AGG | - | chr7_4:59801005-59801024 | Msa1167350:intron | 55.0% | |
| GGACTCCTGTCTCTTCCCAT+TGG | + | chr7_4:59801043-59801062 | None:intergenic | 55.0% | |
| TACGATTTCTCGGGGGGCTC+CGG | + | chr7_4:59800895-59800914 | None:intergenic | 60.0% | |
| !! | CTGGCCGTGGTTCTGGTAGA+AGG | - | chr7_4:59800936-59800955 | Msa1167350:intron | 60.0% |
| GACAGGTCTCATGGCTCCCA+TGG | - | chr7_4:59800965-59800984 | Msa1167350:CDS | 60.0% | |
| GGCCAAGAAGCCGTAGTCCT+CGG | - | chr7_4:59800993-59801012 | Msa1167350:CDS | 60.0% | |
| TGCCGAGGACTACGGCTTCT+TGG | + | chr7_4:59800998-59801017 | None:intergenic | 60.0% | |
| AGCCGTAGTCCTCGGCATAG+AGG | - | chr7_4:59801001-59801020 | Msa1167350:intron | 60.0% | |
| GTCCTCGGCATAGAGGAAGG+CGG | - | chr7_4:59801008-59801027 | Msa1167350:intron | 60.0% | |
| CGGCTCCCTCTATTTCACCC+AGG | + | chr7_4:59801468-59801487 | None:intergenic | 60.0% | |
| GGGCGTTCGTATTCTGGCCG+TGG | - | chr7_4:59800923-59800942 | Msa1167350:intron | 65.0% | |
| CTCCGCCTTCCTCTATGCCG+AGG | + | chr7_4:59801013-59801032 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 59798714 | 59801653 | 59798714 | ID=Msa1167350;Name=Msa1167350 |
| chr7_4 | mRNA | 59798714 | 59801653 | 59798714 | ID=Msa1167350-mRNA-1;Parent=Msa1167350;Name=Msa1167350-mRNA-1;_AED=0.17;_eAED=0.17;_QI=87|1|1|1|1|1|5|419|327 |
| chr7_4 | exon | 59798714 | 59799541 | 59798714 | ID=Msa1167350-mRNA-1:exon:18626;Parent=Msa1167350-mRNA-1 |
| chr7_4 | exon | 59799635 | 59799761 | 59799635 | ID=Msa1167350-mRNA-1:exon:18625;Parent=Msa1167350-mRNA-1 |
| chr7_4 | exon | 59800937 | 59801018 | 59800937 | ID=Msa1167350-mRNA-1:exon:18624;Parent=Msa1167350-mRNA-1 |
| chr7_4 | exon | 59801113 | 59801199 | 59801113 | ID=Msa1167350-mRNA-1:exon:18623;Parent=Msa1167350-mRNA-1 |
| chr7_4 | exon | 59801288 | 59801653 | 59801288 | ID=Msa1167350-mRNA-1:exon:18622;Parent=Msa1167350-mRNA-1 |
| chr7_4 | five_prime_UTR | 59801567 | 59801653 | 59801567 | ID=Msa1167350-mRNA-1:five_prime_utr;Parent=Msa1167350-mRNA-1 |
| chr7_4 | CDS | 59801288 | 59801566 | 59801288 | ID=Msa1167350-mRNA-1:cds;Parent=Msa1167350-mRNA-1 |
| chr7_4 | CDS | 59801113 | 59801199 | 59801113 | ID=Msa1167350-mRNA-1:cds;Parent=Msa1167350-mRNA-1 |
| chr7_4 | CDS | 59800937 | 59801018 | 59800937 | ID=Msa1167350-mRNA-1:cds;Parent=Msa1167350-mRNA-1 |
| chr7_4 | CDS | 59799635 | 59799761 | 59799635 | ID=Msa1167350-mRNA-1:cds;Parent=Msa1167350-mRNA-1 |
| chr7_4 | CDS | 59799133 | 59799541 | 59799133 | ID=Msa1167350-mRNA-1:cds;Parent=Msa1167350-mRNA-1 |
| chr7_4 | three_prime_UTR | 59798714 | 59799132 | 59798714 | ID=Msa1167350-mRNA-1:three_prime_utr;Parent=Msa1167350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
