Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131390 | XP_003610294.1 | 95.695 | 302 | 13 | 0 | 1 | 302 | 1 | 302 | 0.0 | 602 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131390 | sp|Q9FDX1|SKIP1_ARATH | 56.291 | 302 | 127 | 3 | 3 | 302 | 2 | 300 | 4.33e-122 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131390 | G7JFK8 | 95.695 | 302 | 13 | 0 | 1 | 302 | 1 | 302 | 0.0 | 602 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0101810 | Msa1131390 | 0.821252 | 4.457914e-53 | -8.615850e-47 |
| Msa0719490 | Msa1131390 | 0.803084 | 4.126981e-49 | -8.615850e-47 |
| Msa0802470 | Msa1131390 | 0.827614 | 1.419200e-54 | -8.615850e-47 |
| Msa1105090 | Msa1131390 | 0.819542 | 1.099381e-52 | -8.615850e-47 |
| Msa1131390 | Msa1211630 | 0.801622 | 8.256240e-49 | -8.615850e-47 |
| Msa0548280 | Msa1131390 | 0.823370 | 1.436743e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131390 | MtrunA17_Chr4g0073771 | 95.695 | 302 | 13 | 0 | 1 | 302 | 1 | 302 | 0.0 | 602 |
| Msa1131390 | MtrunA17_Chr4g0073781 | 78.652 | 89 | 19 | 0 | 81 | 169 | 1 | 89 | 5.55e-43 | 143 |
| Msa1131390 | MtrunA17_Chr2g0285641 | 27.509 | 269 | 165 | 7 | 5 | 271 | 24 | 264 | 4.59e-21 | 91.7 |
| Msa1131390 | MtrunA17_Chr8g0382941 | 30.208 | 288 | 159 | 10 | 5 | 282 | 19 | 274 | 4.94e-21 | 91.3 |
| Msa1131390 | MtrunA17_Chr2g0285661 | 27.273 | 253 | 155 | 5 | 3 | 253 | 19 | 244 | 8.40e-20 | 88.2 |
| Msa1131390 | MtrunA17_Chr3g0119481 | 27.957 | 279 | 167 | 9 | 1 | 275 | 1 | 249 | 1.33e-18 | 83.6 |
| Msa1131390 | MtrunA17_Chr5g0426491 | 26.250 | 240 | 150 | 6 | 9 | 247 | 10 | 223 | 1.61e-18 | 84.3 |
| Msa1131390 | MtrunA17_Chr2g0285671 | 26.800 | 250 | 164 | 5 | 3 | 251 | 18 | 249 | 1.12e-17 | 82.0 |
| Msa1131390 | MtrunA17_Chr3g0116021 | 27.586 | 261 | 158 | 6 | 9 | 266 | 10 | 242 | 2.47e-17 | 80.9 |
| Msa1131390 | MtrunA17_Chr6g0455431 | 28.070 | 285 | 169 | 9 | 1 | 274 | 3 | 262 | 1.44e-16 | 80.1 |
| Msa1131390 | MtrunA17_Chr6g0455431 | 27.473 | 273 | 164 | 10 | 9 | 274 | 351 | 596 | 3.82e-16 | 78.6 |
| Msa1131390 | MtrunA17_Chr3g0110491 | 29.368 | 269 | 164 | 8 | 9 | 275 | 47 | 291 | 1.95e-16 | 78.6 |
| Msa1131390 | MtrunA17_Chr3g0119451 | 27.740 | 292 | 173 | 10 | 1 | 288 | 33 | 290 | 2.25e-16 | 78.2 |
| Msa1131390 | MtrunA17_Chr3g0111401 | 30.233 | 258 | 133 | 8 | 2 | 250 | 25 | 244 | 6.85e-15 | 73.2 |
| Msa1131390 | MtrunA17_Chr3g0119461 | 26.642 | 274 | 166 | 11 | 1 | 269 | 1 | 244 | 6.86e-14 | 70.1 |
| Msa1131390 | MtrunA17_Chr2g0286991 | 24.219 | 256 | 150 | 6 | 57 | 268 | 329 | 584 | 1.19e-13 | 71.2 |
| Msa1131390 | MtrunA17_Chr2g0286991 | 31.250 | 176 | 108 | 6 | 102 | 266 | 179 | 352 | 3.81e-12 | 66.6 |
| Msa1131390 | MtrunA17_Chr5g0410011 | 25.362 | 276 | 160 | 8 | 2 | 269 | 14 | 251 | 5.80e-13 | 67.8 |
| Msa1131390 | MtrunA17_Chr3g0110521 | 26.335 | 281 | 166 | 9 | 9 | 285 | 18 | 261 | 5.85e-13 | 67.8 |
| Msa1131390 | MtrunA17_Chr3g0137771 | 29.940 | 167 | 104 | 4 | 102 | 257 | 227 | 391 | 7.92e-13 | 68.9 |
| Msa1131390 | MtrunA17_Chr3g0125671 | 22.648 | 287 | 181 | 7 | 1 | 285 | 31 | 278 | 8.08e-13 | 68.2 |
| Msa1131390 | MtrunA17_Chr1g0149351 | 26.554 | 177 | 121 | 3 | 102 | 269 | 229 | 405 | 1.55e-12 | 67.8 |
| Msa1131390 | MtrunA17_Chr5g0448101 | 29.530 | 149 | 84 | 3 | 102 | 247 | 23 | 153 | 2.79e-12 | 64.3 |
| Msa1131390 | MtrunA17_Chr1g0159531 | 25.000 | 264 | 158 | 7 | 8 | 268 | 26 | 252 | 8.66e-12 | 65.1 |
| Msa1131390 | MtrunA17_Chr2g0285631 | 27.500 | 240 | 144 | 7 | 3 | 242 | 23 | 232 | 1.00e-11 | 63.9 |
| Msa1131390 | MtrunA17_Chr3g0112031 | 27.126 | 247 | 137 | 7 | 5 | 250 | 19 | 223 | 5.83e-11 | 61.6 |
| Msa1131390 | MtrunA17_Chr2g0285751 | 27.869 | 183 | 111 | 4 | 95 | 271 | 61 | 228 | 7.63e-11 | 61.6 |
| Msa1131390 | MtrunA17_Chr4g0004901 | 27.746 | 173 | 117 | 4 | 91 | 255 | 380 | 552 | 8.79e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131390 | AT5G57900.1 | 56.291 | 302 | 127 | 3 | 3 | 302 | 2 | 300 | 4.41e-123 | 354 |
| Msa1131390 | AT4G30640.1 | 52.482 | 282 | 133 | 1 | 8 | 289 | 19 | 299 | 3.02e-100 | 296 |
| Msa1131390 | AT4G05470.1 | 30.996 | 271 | 159 | 10 | 9 | 272 | 46 | 295 | 2.43e-21 | 92.4 |
| Msa1131390 | AT4G05460.1 | 30.116 | 259 | 135 | 8 | 1 | 251 | 11 | 231 | 1.75e-19 | 87.0 |
| Msa1131390 | AT4G05475.1 | 31.317 | 281 | 154 | 12 | 2 | 272 | 33 | 284 | 7.61e-19 | 85.5 |
| Msa1131390 | AT4G03630.1 | 30.303 | 198 | 118 | 5 | 77 | 272 | 24 | 203 | 4.43e-18 | 81.6 |
| Msa1131390 | AT4G08980.5 | 29.365 | 252 | 145 | 8 | 1 | 247 | 1 | 224 | 1.06e-17 | 82.4 |
| Msa1131390 | AT4G08980.4 | 29.365 | 252 | 145 | 8 | 1 | 247 | 1 | 224 | 1.06e-17 | 82.4 |
| Msa1131390 | AT4G08980.1 | 29.365 | 252 | 145 | 8 | 1 | 247 | 1 | 224 | 1.06e-17 | 82.4 |
| Msa1131390 | AT4G08980.2 | 29.365 | 252 | 145 | 8 | 1 | 247 | 1 | 224 | 1.06e-17 | 82.4 |
| Msa1131390 | AT4G08980.3 | 29.365 | 252 | 145 | 8 | 1 | 247 | 1 | 224 | 1.06e-17 | 82.4 |
| Msa1131390 | AT4G05497.1 | 27.843 | 255 | 152 | 5 | 1 | 251 | 13 | 239 | 3.33e-17 | 79.7 |
| Msa1131390 | AT5G52480.1 | 33.143 | 175 | 98 | 4 | 79 | 252 | 16 | 172 | 2.37e-14 | 71.6 |
| Msa1131390 | AT4G15475.1 | 26.131 | 199 | 115 | 2 | 102 | 268 | 386 | 584 | 3.91e-14 | 73.2 |
| Msa1131390 | AT4G15475.1 | 26.066 | 211 | 141 | 6 | 68 | 265 | 298 | 506 | 7.22e-11 | 63.2 |
| Msa1131390 | AT5G25350.1 | 25.974 | 231 | 132 | 4 | 3 | 220 | 49 | 253 | 6.49e-14 | 72.4 |
| Msa1131390 | AT1G21410.2 | 24.476 | 286 | 177 | 7 | 1 | 285 | 20 | 267 | 9.90e-13 | 68.2 |
| Msa1131390 | AT1G21410.1 | 24.476 | 286 | 177 | 7 | 1 | 285 | 20 | 267 | 9.90e-13 | 68.2 |
| Msa1131390 | AT5G52480.2 | 32.143 | 168 | 91 | 5 | 106 | 272 | 6 | 151 | 6.03e-12 | 64.3 |
Find 89 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTGCATGTCCAAATTTA+AGG | 0.116830 | 7_3:+83950249 | Msa1131390:CDS |
| ATGTCCAATTCCCTTAAATT+TGG | 0.182958 | 7_3:-83950260 | None:intergenic |
| GACCTTGGAATGTAGAAATT+TGG | 0.195194 | 7_3:-83950653 | None:intergenic |
| GAACTAATTGGAATATTATT+AGG | 0.243633 | 7_3:-83950983 | None:intergenic |
| CTCGAGTTCTTGGATTTGTC+TGG | 0.258906 | 7_3:+83950557 | Msa1131390:CDS |
| ATTATTAGGTAAATCCATTA+TGG | 0.265641 | 7_3:-83950969 | None:intergenic |
| AGATCTTAATTGCATTTCTA+TGG | 0.275391 | 7_3:+83950824 | Msa1131390:three_prime_UTR |
| AACAATAGAAGGAACGAAAA+TGG | 0.291133 | 7_3:+83949063 | Msa1131390:exon |
| ATTGACAACACCTCAAGATT+TGG | 0.303401 | 7_3:-83950182 | None:intergenic |
| TCTCTTGAGAACTTTAAGTT+TGG | 0.313836 | 7_3:-83950339 | None:intergenic |
| ATGTCCAAATTTAAGGGAAT+TGG | 0.331112 | 7_3:+83950256 | Msa1131390:CDS |
| TCAAAGCAAAGAGAACTAAT+TGG | 0.333423 | 7_3:-83950995 | None:intergenic |
| CATTACTTCTTATATGTTCT+CGG | 0.338992 | 7_3:+83951024 | Msa1131390:three_prime_UTR |
| TTGGATAATCTTCTTATTAA+CGG | 0.347066 | 7_3:-83950752 | None:intergenic |
| AGCAGTGTCGAATACGAATC+TGG | 0.347731 | 7_3:-83949363 | None:intergenic |
| AATCAATTTGAGATTCGAAT+TGG | 0.372432 | 7_3:-83949297 | None:intergenic |
| GTGTCCTAACCTCGAGTTCT+TGG | 0.375787 | 7_3:+83950547 | Msa1131390:CDS |
| GTCTTTCAAATGTGACAAAC+TGG | 0.376236 | 7_3:-83950621 | None:intergenic |
| TATTGCATGTCCAAATTTAA+GGG | 0.384078 | 7_3:+83950250 | Msa1131390:CDS |
| CGATGCTTGTTTGCAAATCA+TGG | 0.402311 | 7_3:+83949179 | Msa1131390:CDS |
| AGGCCTCAATTCAATATGTC+AGG | 0.419961 | 7_3:+83950523 | Msa1131390:CDS |
| TGAAATAACTCATGAGTCAT+TGG | 0.425193 | 7_3:+83950295 | Msa1131390:CDS |
| TCGAGTGGTTTGTCGAAGTA+AGG | 0.429555 | 7_3:-83949253 | None:intergenic |
| GTCTAAATCCAAACAATAGA+AGG | 0.431782 | 7_3:+83949052 | Msa1131390:five_prime_UTR |
| TGGACTCACACTATTCATAT+TGG | 0.444780 | 7_3:-83950771 | None:intergenic |
| GAAATGCAATTAAGATCTGC+AGG | 0.445240 | 7_3:-83950819 | None:intergenic |
| AAGAGATGGTTCTTCCTTGA+AGG | 0.448029 | 7_3:-83949209 | None:intergenic |
| CTCTCGCTCTTGTTGCTCAA+AGG | 0.448311 | 7_3:+83949395 | Msa1131390:CDS |
| GAGGCCTTTCGCTGTAAACT+TGG | 0.453961 | 7_3:-83950507 | None:intergenic |
| TCATTGTCTCAAGTCCATAA+TGG | 0.454117 | 7_3:+83950955 | Msa1131390:three_prime_UTR |
| CTTCAAAGCTCAGTCGAGAT+AGG | 0.456485 | 7_3:-83949141 | None:intergenic |
| CATGAGTCATTGGTGCTGAT+TGG | 0.460875 | 7_3:+83950305 | Msa1131390:CDS |
| AGGAACAATCCCTACGTGTT+GGG | 0.461780 | 7_3:-83950387 | None:intergenic |
| ATCTAGAGTGCCTAGAGATT+AGG | 0.467827 | 7_3:+83950480 | Msa1131390:CDS |
| TGCTTCGTTCTATCGTTCAA+TGG | 0.473753 | 7_3:+83949323 | Msa1131390:CDS |
| TTCTCCAAGTTTACAGCGAA+AGG | 0.474871 | 7_3:+83950503 | Msa1131390:CDS |
| TCGAGTTCTTGGATTTGTCT+GGG | 0.474983 | 7_3:+83950558 | Msa1131390:CDS |
| AAATCCAAGAACTCGAGGTT+AGG | 0.476925 | 7_3:-83950551 | None:intergenic |
| ATCATGGTTCAACGCCTTCA+AGG | 0.493134 | 7_3:+83949195 | Msa1131390:CDS |
| GACTGAGCTTTGAAGATCAA+TGG | 0.501599 | 7_3:+83949149 | Msa1131390:CDS |
| AGCCAAATTTCTACATTCCA+AGG | 0.502665 | 7_3:+83950651 | Msa1131390:CDS |
| AGGGACTAGTAGAAAGAAGA+TGG | 0.507014 | 7_3:-83950799 | None:intergenic |
| CAAGCATTTAGATAATCATC+AGG | 0.513285 | 7_3:-83950407 | None:intergenic |
| CAATTTGAGATTCGAATTGG+AGG | 0.520908 | 7_3:-83949294 | None:intergenic |
| TTCTATTGTTTGGATTTAGA+CGG | 0.521634 | 7_3:-83949050 | None:intergenic |
| TAGATAGATTATCTATTACA+AGG | 0.526563 | 7_3:+83949018 | None:intergenic |
| CTAAATGCTTGTCCGCAAGA+TGG | 0.533896 | 7_3:+83950419 | Msa1131390:CDS |
| GTCTTTCACACTGAAAGGTA+TGG | 0.537103 | 7_3:+83950677 | Msa1131390:CDS |
| ACTTGGAGAACCTAATCTCT+AGG | 0.544545 | 7_3:-83950490 | None:intergenic |
| CAGGAACAATCCCTACGTGT+TGG | 0.549951 | 7_3:-83950388 | None:intergenic |
| TCAGTGTGAAAGACAGACCT+TGG | 0.551629 | 7_3:-83950668 | None:intergenic |
| GTCGAATACGAATCTGGGTG+AGG | 0.561288 | 7_3:-83949357 | None:intergenic |
| ACACTGAAAGGTATGGACAT+TGG | 0.568468 | 7_3:+83950684 | Msa1131390:CDS |
| AGAAGAAAGCGAAGCCGAGT+GGG | 0.572421 | 7_3:+83949087 | Msa1131390:CDS |
| TTGATCCATCCCAACACGTA+GGG | 0.572535 | 7_3:+83950378 | Msa1131390:CDS |
| GCAGTGTCGAATACGAATCT+GGG | 0.572832 | 7_3:-83949362 | None:intergenic |
| GGGACTAGTAGAAAGAAGAT+GGG | 0.574456 | 7_3:-83950798 | None:intergenic |
| ACAATCCCTACGTGTTGGGA+TGG | 0.580699 | 7_3:-83950383 | None:intergenic |
| CGGTCAGATTCTGAAAACAT+CGG | 0.583031 | 7_3:-83950732 | None:intergenic |
| TTGAATACAGAGTGAAGAGA+TGG | 0.583057 | 7_3:-83949223 | None:intergenic |
| GGTCTGTCTTTCACACTGAA+AGG | 0.584105 | 7_3:+83950672 | Msa1131390:CDS |
| TTTCAGATGTCCAAATCTTG+AGG | 0.585484 | 7_3:+83950172 | Msa1131390:intron |
| GGCCTCAATTCAATATGTCA+GGG | 0.586230 | 7_3:+83950524 | Msa1131390:CDS |
| AATTTGAGATTCGAATTGGA+GGG | 0.589623 | 7_3:-83949293 | None:intergenic |
| GTAGAAAGAAGATGGGGTGG+TGG | 0.591609 | 7_3:-83950791 | None:intergenic |
| AACCACTCGAATCACCTCGC+TGG | 0.593688 | 7_3:+83949266 | Msa1131390:CDS |
| AGATAGATTATCTATTACAA+GGG | 0.600107 | 7_3:+83949019 | None:intergenic |
| ACCCCTGACATATTGAATTG+AGG | 0.601708 | 7_3:-83950526 | None:intergenic |
| ATCTCTAGGCACTCTAGATG+AGG | 0.605463 | 7_3:-83950476 | None:intergenic |
| GCTTCAGAATCTCCATCTTG+CGG | 0.607040 | 7_3:-83950431 | None:intergenic |
| ACATATACATTACAGATACA+AGG | 0.610608 | 7_3:-83950924 | None:intergenic |
| TTGAACGATAGAACGAAGCA+TGG | 0.611436 | 7_3:-83949320 | None:intergenic |
| ATTGGAGACTATATGATGAG+AGG | 0.614259 | 7_3:+83950702 | Msa1131390:CDS |
| AAGAAGAAAGCGAAGCCGAG+TGG | 0.615547 | 7_3:+83949086 | Msa1131390:CDS |
| CACCAGCGAGGTGATTCGAG+TGG | 0.616799 | 7_3:-83949268 | None:intergenic |
| ACGAGTCAACTCGCCCCACT+CGG | 0.634897 | 7_3:-83949101 | None:intergenic |
| GAAGAAAGCGAAGCCGAGTG+GGG | 0.639602 | 7_3:+83949088 | Msa1131390:CDS |
| AGGCATAGAATTAGCAATAG+CGG | 0.644825 | 7_3:-83950456 | None:intergenic |
| CTAGTAGAAAGAAGATGGGG+TGG | 0.649361 | 7_3:-83950794 | None:intergenic |
| AAATGCAATTAAGATCTGCA+GGG | 0.661170 | 7_3:-83950818 | None:intergenic |
| GTCGAGATAGGATGTTGATG+AGG | 0.664413 | 7_3:-83949129 | None:intergenic |
| AGCTTTGAAGATCAATGGCG+CGG | 0.665061 | 7_3:+83949154 | Msa1131390:CDS |
| GCCTCAATTCAATATGTCAG+GGG | 0.671731 | 7_3:+83950525 | Msa1131390:CDS |
| CTTGATCCATCCCAACACGT+AGG | 0.680143 | 7_3:+83950377 | Msa1131390:CDS |
| GGACTAGTAGAAAGAAGATG+GGG | 0.702957 | 7_3:-83950797 | None:intergenic |
| AATTGGAGGGTCCACCAGCG+AGG | 0.715747 | 7_3:-83949280 | None:intergenic |
| TAGAATCATCAGTAACACGA+GGG | 0.724815 | 7_3:-83950214 | None:intergenic |
| ATAGAATCATCAGTAACACG+AGG | 0.726964 | 7_3:-83950215 | None:intergenic |
| CAGACAAATCCAAGAACTCG+AGG | 0.731192 | 7_3:-83950556 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTCTAAGTTGAAATT+TGG | - | chr7_3:83949434-83949453 | None:intergenic | 15.0% |
| !! | AATTTCAACTTAGAAATTAT+TGG | + | chr7_3:83949434-83949453 | Msa1131390:intron | 15.0% |
| !! | ATTTCAACTTAGAAATTATT+GGG | + | chr7_3:83949435-83949454 | Msa1131390:intron | 15.0% |
| !! | TTAATCTATAACCTTATATT+TGG | - | chr7_3:83949617-83949636 | None:intergenic | 15.0% |
| !!! | TTTTTTTGTTTGTTTTGAAT+CGG | + | chr7_3:83949677-83949696 | Msa1131390:intron | 15.0% |
| !!! | ATAATTTCTAAGTTGAAATT+TGG | - | chr7_3:83949434-83949453 | None:intergenic | 15.0% |
| !! | AATTTCAACTTAGAAATTAT+TGG | + | chr7_3:83949434-83949453 | Msa1131390:intron | 15.0% |
| !! | ATTTCAACTTAGAAATTATT+GGG | + | chr7_3:83949435-83949454 | Msa1131390:intron | 15.0% |
| !! | TTAATCTATAACCTTATATT+TGG | - | chr7_3:83949617-83949636 | None:intergenic | 15.0% |
| !!! | TTTTTTTGTTTGTTTTGAAT+CGG | + | chr7_3:83949677-83949696 | Msa1131390:intron | 15.0% |
| !!! | TGTTTTGTTTTGTTTTGATT+TGG | + | chr7_3:83949534-83949553 | Msa1131390:intron | 20.0% |
| !! | TTTGAATGTATCCAAATATA+AGG | + | chr7_3:83949603-83949622 | Msa1131390:intron | 20.0% |
| !!! | TCAAGAGAAATTTTATGAAT+TGG | + | chr7_3:83950354-83950373 | Msa1131390:CDS | 20.0% |
| !! | TTGGATAATCTTCTTATTAA+CGG | - | chr7_3:83950755-83950774 | None:intergenic | 20.0% |
| !! | ATTATTAGGTAAATCCATTA+TGG | - | chr7_3:83950972-83950991 | None:intergenic | 20.0% |
| !! | GAACTAATTGGAATATTATT+AGG | - | chr7_3:83950986-83951005 | None:intergenic | 20.0% |
| !!! | AGAACTGTAAACAATTTTTA+TGG | - | chr7_3:83951060-83951079 | None:intergenic | 20.0% |
| !!! | TGTTTTGTTTTGTTTTGATT+TGG | + | chr7_3:83949534-83949553 | Msa1131390:intron | 20.0% |
| !! | TTTGAATGTATCCAAATATA+AGG | + | chr7_3:83949603-83949622 | Msa1131390:intron | 20.0% |
| !!! | TCAAGAGAAATTTTATGAAT+TGG | + | chr7_3:83950354-83950373 | Msa1131390:CDS | 20.0% |
| !! | TTGGATAATCTTCTTATTAA+CGG | - | chr7_3:83950755-83950774 | None:intergenic | 20.0% |
| !! | ATTATTAGGTAAATCCATTA+TGG | - | chr7_3:83950972-83950991 | None:intergenic | 20.0% |
| !! | GAACTAATTGGAATATTATT+AGG | - | chr7_3:83950986-83951005 | None:intergenic | 20.0% |
| !!! | AGAACTGTAAACAATTTTTA+TGG | - | chr7_3:83951060-83951079 | None:intergenic | 20.0% |
| ! | TTCTATTGTTTGGATTTAGA+CGG | - | chr7_3:83949053-83949072 | None:intergenic | 25.0% |
| !! | AATCAATTTGAGATTCGAAT+TGG | - | chr7_3:83949300-83949319 | None:intergenic | 25.0% |
| !! | ATAGATTTTCACTCTCAAAT+TGG | + | chr7_3:83949479-83949498 | Msa1131390:intron | 25.0% |
| !! | TAGATTTTCACTCTCAAATT+GGG | + | chr7_3:83949480-83949499 | Msa1131390:intron | 25.0% |
| ! | ACAGTTATAATGCTATGAAA+GGG | - | chr7_3:83949508-83949527 | None:intergenic | 25.0% |
| ! | TACAGTTATAATGCTATGAA+AGG | - | chr7_3:83949509-83949528 | None:intergenic | 25.0% |
| !!! | TTTGTTTTGTTTTGATTTGG+AGG | + | chr7_3:83949537-83949556 | Msa1131390:intron | 25.0% |
| !!! | AAAATTGAATCATTTTGAGG+TGG | + | chr7_3:83949564-83949583 | Msa1131390:intron | 25.0% |
| ! | TCTTTATGAATTGCGAATAT+AGG | + | chr7_3:83949748-83949767 | Msa1131390:intron | 25.0% |
| ! | CTTTATGAATTGCGAATATA+GGG | + | chr7_3:83949749-83949768 | Msa1131390:intron | 25.0% |
| !!! | GTTGCTTTTATAAGCTATAT+TGG | + | chr7_3:83949908-83949927 | Msa1131390:intron | 25.0% |
| !!! | TTGTTTTGTTTTTTCGGTTT+TGG | + | chr7_3:83950119-83950138 | Msa1131390:intron | 25.0% |
| !!! | TGTTTTGTTTTTTCGGTTTT+GGG | + | chr7_3:83950120-83950139 | Msa1131390:intron | 25.0% |
| ! | TATTGCATGTCCAAATTTAA+GGG | + | chr7_3:83950250-83950269 | Msa1131390:CDS | 25.0% |
| ! | AGATCTTAATTGCATTTCTA+TGG | + | chr7_3:83950824-83950843 | Msa1131390:three_prime_UTR | 25.0% |
| ! | ACATATACATTACAGATACA+AGG | - | chr7_3:83950927-83950946 | None:intergenic | 25.0% |
| ! | CATTACTTCTTATATGTTCT+CGG | + | chr7_3:83951024-83951043 | Msa1131390:three_prime_UTR | 25.0% |
| ! | TTCTATTGTTTGGATTTAGA+CGG | - | chr7_3:83949053-83949072 | None:intergenic | 25.0% |
| !! | AATCAATTTGAGATTCGAAT+TGG | - | chr7_3:83949300-83949319 | None:intergenic | 25.0% |
| !! | ATAGATTTTCACTCTCAAAT+TGG | + | chr7_3:83949479-83949498 | Msa1131390:intron | 25.0% |
| !! | TAGATTTTCACTCTCAAATT+GGG | + | chr7_3:83949480-83949499 | Msa1131390:intron | 25.0% |
| ! | ACAGTTATAATGCTATGAAA+GGG | - | chr7_3:83949508-83949527 | None:intergenic | 25.0% |
| ! | TACAGTTATAATGCTATGAA+AGG | - | chr7_3:83949509-83949528 | None:intergenic | 25.0% |
| !!! | TTTGTTTTGTTTTGATTTGG+AGG | + | chr7_3:83949537-83949556 | Msa1131390:intron | 25.0% |
| !!! | AAAATTGAATCATTTTGAGG+TGG | + | chr7_3:83949564-83949583 | Msa1131390:intron | 25.0% |
| ! | TCTTTATGAATTGCGAATAT+AGG | + | chr7_3:83949748-83949767 | Msa1131390:intron | 25.0% |
| ! | CTTTATGAATTGCGAATATA+GGG | + | chr7_3:83949749-83949768 | Msa1131390:intron | 25.0% |
| !!! | GTTGCTTTTATAAGCTATAT+TGG | + | chr7_3:83949908-83949927 | Msa1131390:intron | 25.0% |
| !!! | TTGTTTTGTTTTTTCGGTTT+TGG | + | chr7_3:83950119-83950138 | Msa1131390:intron | 25.0% |
| !!! | TGTTTTGTTTTTTCGGTTTT+GGG | + | chr7_3:83950120-83950139 | Msa1131390:intron | 25.0% |
| ! | TATTGCATGTCCAAATTTAA+GGG | + | chr7_3:83950250-83950269 | Msa1131390:CDS | 25.0% |
| ! | AGATCTTAATTGCATTTCTA+TGG | + | chr7_3:83950824-83950843 | Msa1131390:three_prime_UTR | 25.0% |
| ! | ACATATACATTACAGATACA+AGG | - | chr7_3:83950927-83950946 | None:intergenic | 25.0% |
| ! | CATTACTTCTTATATGTTCT+CGG | + | chr7_3:83951024-83951043 | Msa1131390:three_prime_UTR | 25.0% |
| GTCTAAATCCAAACAATAGA+AGG | + | chr7_3:83949052-83949071 | Msa1131390:five_prime_UTR | 30.0% | |
| ! | TTTTCGTTCCTTCTATTGTT+TGG | - | chr7_3:83949063-83949082 | None:intergenic | 30.0% |
| AACAATAGAAGGAACGAAAA+TGG | + | chr7_3:83949063-83949082 | Msa1131390:exon | 30.0% | |
| ! | AATTTGAGATTCGAATTGGA+GGG | - | chr7_3:83949296-83949315 | None:intergenic | 30.0% |
| ! | GGCAAAATTGAATCATTTTG+AGG | + | chr7_3:83949561-83949580 | Msa1131390:intron | 30.0% |
| TCAAATAAGCTAATCCAAAC+AGG | + | chr7_3:83950034-83950053 | Msa1131390:intron | 30.0% | |
| AATCCAAACAGGTATAATAC+TGG | + | chr7_3:83950045-83950064 | Msa1131390:intron | 30.0% | |
| !!! | GCTGCTTTGTTTTGTTTTTT+CGG | + | chr7_3:83950113-83950132 | Msa1131390:intron | 30.0% |
| CTATTGCATGTCCAAATTTA+AGG | + | chr7_3:83950249-83950268 | Msa1131390:CDS | 30.0% | |
| ATGTCCAAATTTAAGGGAAT+TGG | + | chr7_3:83950256-83950275 | Msa1131390:CDS | 30.0% | |
| ATGTCCAATTCCCTTAAATT+TGG | - | chr7_3:83950263-83950282 | None:intergenic | 30.0% | |
| TGAAATAACTCATGAGTCAT+TGG | + | chr7_3:83950295-83950314 | Msa1131390:CDS | 30.0% | |
| ! | TCTCTTGAGAACTTTAAGTT+TGG | - | chr7_3:83950342-83950361 | None:intergenic | 30.0% |
| CAAGCATTTAGATAATCATC+AGG | - | chr7_3:83950410-83950429 | None:intergenic | 30.0% | |
| AAATGCAATTAAGATCTGCA+GGG | - | chr7_3:83950821-83950840 | None:intergenic | 30.0% | |
| TCAAAGCAAAGAGAACTAAT+TGG | - | chr7_3:83950998-83951017 | None:intergenic | 30.0% | |
| GTCTAAATCCAAACAATAGA+AGG | + | chr7_3:83949052-83949071 | Msa1131390:five_prime_UTR | 30.0% | |
| ! | TTTTCGTTCCTTCTATTGTT+TGG | - | chr7_3:83949063-83949082 | None:intergenic | 30.0% |
| AACAATAGAAGGAACGAAAA+TGG | + | chr7_3:83949063-83949082 | Msa1131390:exon | 30.0% | |
| ! | AATTTGAGATTCGAATTGGA+GGG | - | chr7_3:83949296-83949315 | None:intergenic | 30.0% |
| ! | GGCAAAATTGAATCATTTTG+AGG | + | chr7_3:83949561-83949580 | Msa1131390:intron | 30.0% |
| TCAAATAAGCTAATCCAAAC+AGG | + | chr7_3:83950034-83950053 | Msa1131390:intron | 30.0% | |
| AATCCAAACAGGTATAATAC+TGG | + | chr7_3:83950045-83950064 | Msa1131390:intron | 30.0% | |
| !!! | GCTGCTTTGTTTTGTTTTTT+CGG | + | chr7_3:83950113-83950132 | Msa1131390:intron | 30.0% |
| CTATTGCATGTCCAAATTTA+AGG | + | chr7_3:83950249-83950268 | Msa1131390:CDS | 30.0% | |
| ATGTCCAAATTTAAGGGAAT+TGG | + | chr7_3:83950256-83950275 | Msa1131390:CDS | 30.0% | |
| ATGTCCAATTCCCTTAAATT+TGG | - | chr7_3:83950263-83950282 | None:intergenic | 30.0% | |
| TGAAATAACTCATGAGTCAT+TGG | + | chr7_3:83950295-83950314 | Msa1131390:CDS | 30.0% | |
| ! | TCTCTTGAGAACTTTAAGTT+TGG | - | chr7_3:83950342-83950361 | None:intergenic | 30.0% |
| CAAGCATTTAGATAATCATC+AGG | - | chr7_3:83950410-83950429 | None:intergenic | 30.0% | |
| AAATGCAATTAAGATCTGCA+GGG | - | chr7_3:83950821-83950840 | None:intergenic | 30.0% | |
| TCAAAGCAAAGAGAACTAAT+TGG | - | chr7_3:83950998-83951017 | None:intergenic | 30.0% | |
| TTGAATACAGAGTGAAGAGA+TGG | - | chr7_3:83949226-83949245 | None:intergenic | 35.0% | |
| ! | CAATTTGAGATTCGAATTGG+AGG | - | chr7_3:83949297-83949316 | None:intergenic | 35.0% |
| !!! | GTTTTGTTTTGATTTGGAGG+AGG | + | chr7_3:83949540-83949559 | Msa1131390:intron | 35.0% |
| !! | TAAGTTTTGTGAGACTGCTT+GGG | - | chr7_3:83949999-83950018 | None:intergenic | 35.0% |
| !! | ATAAGTTTTGTGAGACTGCT+TGG | - | chr7_3:83950000-83950019 | None:intergenic | 35.0% |
| GTTCCAGTATTATACCTGTT+TGG | - | chr7_3:83950051-83950070 | None:intergenic | 35.0% | |
| !!! | TTGTTTTTTCGGTTTTGGGT+TGG | + | chr7_3:83950124-83950143 | Msa1131390:intron | 35.0% |
| TTTCAGATGTCCAAATCTTG+AGG | + | chr7_3:83950172-83950191 | Msa1131390:intron | 35.0% | |
| ATTGACAACACCTCAAGATT+TGG | - | chr7_3:83950185-83950204 | None:intergenic | 35.0% | |
| TAGAATCATCAGTAACACGA+GGG | - | chr7_3:83950217-83950236 | None:intergenic | 35.0% | |
| ATAGAATCATCAGTAACACG+AGG | - | chr7_3:83950218-83950237 | None:intergenic | 35.0% | |
| AGGCATAGAATTAGCAATAG+CGG | - | chr7_3:83950459-83950478 | None:intergenic | 35.0% | |
| GTCTTTCAAATGTGACAAAC+TGG | - | chr7_3:83950624-83950643 | None:intergenic | 35.0% | |
| AGCCAAATTTCTACATTCCA+AGG | + | chr7_3:83950651-83950670 | Msa1131390:CDS | 35.0% | |
| GACCTTGGAATGTAGAAATT+TGG | - | chr7_3:83950656-83950675 | None:intergenic | 35.0% | |
| ATTGGAGACTATATGATGAG+AGG | + | chr7_3:83950702-83950721 | Msa1131390:CDS | 35.0% | |
| TGGACTCACACTATTCATAT+TGG | - | chr7_3:83950774-83950793 | None:intergenic | 35.0% | |
| GAAATGCAATTAAGATCTGC+AGG | - | chr7_3:83950822-83950841 | None:intergenic | 35.0% | |
| TCATTGTCTCAAGTCCATAA+TGG | + | chr7_3:83950955-83950974 | Msa1131390:three_prime_UTR | 35.0% | |
| TTGAATACAGAGTGAAGAGA+TGG | - | chr7_3:83949226-83949245 | None:intergenic | 35.0% | |
| ! | CAATTTGAGATTCGAATTGG+AGG | - | chr7_3:83949297-83949316 | None:intergenic | 35.0% |
| !!! | GTTTTGTTTTGATTTGGAGG+AGG | + | chr7_3:83949540-83949559 | Msa1131390:intron | 35.0% |
| !! | TAAGTTTTGTGAGACTGCTT+GGG | - | chr7_3:83949999-83950018 | None:intergenic | 35.0% |
| !! | ATAAGTTTTGTGAGACTGCT+TGG | - | chr7_3:83950000-83950019 | None:intergenic | 35.0% |
| GTTCCAGTATTATACCTGTT+TGG | - | chr7_3:83950051-83950070 | None:intergenic | 35.0% | |
| !!! | TTGTTTTTTCGGTTTTGGGT+TGG | + | chr7_3:83950124-83950143 | Msa1131390:intron | 35.0% |
| TTTCAGATGTCCAAATCTTG+AGG | + | chr7_3:83950172-83950191 | Msa1131390:intron | 35.0% | |
| ATTGACAACACCTCAAGATT+TGG | - | chr7_3:83950185-83950204 | None:intergenic | 35.0% | |
| TAGAATCATCAGTAACACGA+GGG | - | chr7_3:83950217-83950236 | None:intergenic | 35.0% | |
| ATAGAATCATCAGTAACACG+AGG | - | chr7_3:83950218-83950237 | None:intergenic | 35.0% | |
| AGGCATAGAATTAGCAATAG+CGG | - | chr7_3:83950459-83950478 | None:intergenic | 35.0% | |
| GTCTTTCAAATGTGACAAAC+TGG | - | chr7_3:83950624-83950643 | None:intergenic | 35.0% | |
| AGCCAAATTTCTACATTCCA+AGG | + | chr7_3:83950651-83950670 | Msa1131390:CDS | 35.0% | |
| GACCTTGGAATGTAGAAATT+TGG | - | chr7_3:83950656-83950675 | None:intergenic | 35.0% | |
| ATTGGAGACTATATGATGAG+AGG | + | chr7_3:83950702-83950721 | Msa1131390:CDS | 35.0% | |
| TGGACTCACACTATTCATAT+TGG | - | chr7_3:83950774-83950793 | None:intergenic | 35.0% | |
| GAAATGCAATTAAGATCTGC+AGG | - | chr7_3:83950822-83950841 | None:intergenic | 35.0% | |
| TCATTGTCTCAAGTCCATAA+TGG | + | chr7_3:83950955-83950974 | Msa1131390:three_prime_UTR | 35.0% | |
| !! | GACTGAGCTTTGAAGATCAA+TGG | + | chr7_3:83949149-83949168 | Msa1131390:CDS | 40.0% |
| CGATGCTTGTTTGCAAATCA+TGG | + | chr7_3:83949179-83949198 | Msa1131390:CDS | 40.0% | |
| AAGAGATGGTTCTTCCTTGA+AGG | - | chr7_3:83949212-83949231 | None:intergenic | 40.0% | |
| TTGAACGATAGAACGAAGCA+TGG | - | chr7_3:83949323-83949342 | None:intergenic | 40.0% | |
| TGCTTCGTTCTATCGTTCAA+TGG | + | chr7_3:83949323-83949342 | Msa1131390:CDS | 40.0% | |
| GCTTATTTGAGCTTAGCTAC+TGG | - | chr7_3:83950024-83950043 | None:intergenic | 40.0% | |
| ! | ATCTAGAGTGCCTAGAGATT+AGG | + | chr7_3:83950480-83950499 | Msa1131390:CDS | 40.0% |
| ACTTGGAGAACCTAATCTCT+AGG | - | chr7_3:83950493-83950512 | None:intergenic | 40.0% | |
| TTCTCCAAGTTTACAGCGAA+AGG | + | chr7_3:83950503-83950522 | Msa1131390:CDS | 40.0% | |
| AGGCCTCAATTCAATATGTC+AGG | + | chr7_3:83950523-83950542 | Msa1131390:CDS | 40.0% | |
| GGCCTCAATTCAATATGTCA+GGG | + | chr7_3:83950524-83950543 | Msa1131390:CDS | 40.0% | |
| GCCTCAATTCAATATGTCAG+GGG | + | chr7_3:83950525-83950544 | Msa1131390:CDS | 40.0% | |
| ACCCCTGACATATTGAATTG+AGG | - | chr7_3:83950529-83950548 | None:intergenic | 40.0% | |
| AAATCCAAGAACTCGAGGTT+AGG | - | chr7_3:83950554-83950573 | None:intergenic | 40.0% | |
| TCGAGTTCTTGGATTTGTCT+GGG | + | chr7_3:83950558-83950577 | Msa1131390:CDS | 40.0% | |
| GTCTTTCACACTGAAAGGTA+TGG | + | chr7_3:83950677-83950696 | Msa1131390:CDS | 40.0% | |
| ! | ACACTGAAAGGTATGGACAT+TGG | + | chr7_3:83950684-83950703 | Msa1131390:CDS | 40.0% |
| ! | CGGTCAGATTCTGAAAACAT+CGG | - | chr7_3:83950735-83950754 | None:intergenic | 40.0% |
| ! | GGACTAGTAGAAAGAAGATG+GGG | - | chr7_3:83950800-83950819 | None:intergenic | 40.0% |
| ! | GGGACTAGTAGAAAGAAGAT+GGG | - | chr7_3:83950801-83950820 | None:intergenic | 40.0% |
| ! | AGGGACTAGTAGAAAGAAGA+TGG | - | chr7_3:83950802-83950821 | None:intergenic | 40.0% |
| !! | GACTGAGCTTTGAAGATCAA+TGG | + | chr7_3:83949149-83949168 | Msa1131390:CDS | 40.0% |
| CGATGCTTGTTTGCAAATCA+TGG | + | chr7_3:83949179-83949198 | Msa1131390:CDS | 40.0% | |
| AAGAGATGGTTCTTCCTTGA+AGG | - | chr7_3:83949212-83949231 | None:intergenic | 40.0% | |
| TTGAACGATAGAACGAAGCA+TGG | - | chr7_3:83949323-83949342 | None:intergenic | 40.0% | |
| TGCTTCGTTCTATCGTTCAA+TGG | + | chr7_3:83949323-83949342 | Msa1131390:CDS | 40.0% | |
| GCTTATTTGAGCTTAGCTAC+TGG | - | chr7_3:83950024-83950043 | None:intergenic | 40.0% | |
| ! | ATCTAGAGTGCCTAGAGATT+AGG | + | chr7_3:83950480-83950499 | Msa1131390:CDS | 40.0% |
| ACTTGGAGAACCTAATCTCT+AGG | - | chr7_3:83950493-83950512 | None:intergenic | 40.0% | |
| TTCTCCAAGTTTACAGCGAA+AGG | + | chr7_3:83950503-83950522 | Msa1131390:CDS | 40.0% | |
| AGGCCTCAATTCAATATGTC+AGG | + | chr7_3:83950523-83950542 | Msa1131390:CDS | 40.0% | |
| GGCCTCAATTCAATATGTCA+GGG | + | chr7_3:83950524-83950543 | Msa1131390:CDS | 40.0% | |
| GCCTCAATTCAATATGTCAG+GGG | + | chr7_3:83950525-83950544 | Msa1131390:CDS | 40.0% | |
| ACCCCTGACATATTGAATTG+AGG | - | chr7_3:83950529-83950548 | None:intergenic | 40.0% | |
| AAATCCAAGAACTCGAGGTT+AGG | - | chr7_3:83950554-83950573 | None:intergenic | 40.0% | |
| TCGAGTTCTTGGATTTGTCT+GGG | + | chr7_3:83950558-83950577 | Msa1131390:CDS | 40.0% | |
| GTCTTTCACACTGAAAGGTA+TGG | + | chr7_3:83950677-83950696 | Msa1131390:CDS | 40.0% | |
| ! | ACACTGAAAGGTATGGACAT+TGG | + | chr7_3:83950684-83950703 | Msa1131390:CDS | 40.0% |
| ! | CGGTCAGATTCTGAAAACAT+CGG | - | chr7_3:83950735-83950754 | None:intergenic | 40.0% |
| ! | GGACTAGTAGAAAGAAGATG+GGG | - | chr7_3:83950800-83950819 | None:intergenic | 40.0% |
| ! | GGGACTAGTAGAAAGAAGAT+GGG | - | chr7_3:83950801-83950820 | None:intergenic | 40.0% |
| ! | AGGGACTAGTAGAAAGAAGA+TGG | - | chr7_3:83950802-83950821 | None:intergenic | 40.0% |
| GTCGAGATAGGATGTTGATG+AGG | - | chr7_3:83949132-83949151 | None:intergenic | 45.0% | |
| CTTCAAAGCTCAGTCGAGAT+AGG | - | chr7_3:83949144-83949163 | None:intergenic | 45.0% | |
| !! | AGCTTTGAAGATCAATGGCG+CGG | + | chr7_3:83949154-83949173 | Msa1131390:CDS | 45.0% |
| ATCATGGTTCAACGCCTTCA+AGG | + | chr7_3:83949195-83949214 | Msa1131390:CDS | 45.0% | |
| ! | TCGAGTGGTTTGTCGAAGTA+AGG | - | chr7_3:83949256-83949275 | None:intergenic | 45.0% |
| ! | GCAGTGTCGAATACGAATCT+GGG | - | chr7_3:83949365-83949384 | None:intergenic | 45.0% |
| ! | AGCAGTGTCGAATACGAATC+TGG | - | chr7_3:83949366-83949385 | None:intergenic | 45.0% |
| !! | CATGAGTCATTGGTGCTGAT+TGG | + | chr7_3:83950305-83950324 | Msa1131390:CDS | 45.0% |
| TTGATCCATCCCAACACGTA+GGG | + | chr7_3:83950378-83950397 | Msa1131390:CDS | 45.0% | |
| AGGAACAATCCCTACGTGTT+GGG | - | chr7_3:83950390-83950409 | None:intergenic | 45.0% | |
| CTAAATGCTTGTCCGCAAGA+TGG | + | chr7_3:83950419-83950438 | Msa1131390:CDS | 45.0% | |
| GCTTCAGAATCTCCATCTTG+CGG | - | chr7_3:83950434-83950453 | None:intergenic | 45.0% | |
| ATCTCTAGGCACTCTAGATG+AGG | - | chr7_3:83950479-83950498 | None:intergenic | 45.0% | |
| CAGACAAATCCAAGAACTCG+AGG | - | chr7_3:83950559-83950578 | None:intergenic | 45.0% | |
| CTCGAGTTCTTGGATTTGTC+TGG | + | chr7_3:83950557-83950576 | Msa1131390:CDS | 45.0% | |
| TCAGTGTGAAAGACAGACCT+TGG | - | chr7_3:83950671-83950690 | None:intergenic | 45.0% | |
| GGTCTGTCTTTCACACTGAA+AGG | + | chr7_3:83950672-83950691 | Msa1131390:CDS | 45.0% | |
| CTAGTAGAAAGAAGATGGGG+TGG | - | chr7_3:83950797-83950816 | None:intergenic | 45.0% | |
| GTCGAGATAGGATGTTGATG+AGG | - | chr7_3:83949132-83949151 | None:intergenic | 45.0% | |
| CTTCAAAGCTCAGTCGAGAT+AGG | - | chr7_3:83949144-83949163 | None:intergenic | 45.0% | |
| !! | AGCTTTGAAGATCAATGGCG+CGG | + | chr7_3:83949154-83949173 | Msa1131390:CDS | 45.0% |
| ATCATGGTTCAACGCCTTCA+AGG | + | chr7_3:83949195-83949214 | Msa1131390:CDS | 45.0% | |
| ! | TCGAGTGGTTTGTCGAAGTA+AGG | - | chr7_3:83949256-83949275 | None:intergenic | 45.0% |
| ! | GCAGTGTCGAATACGAATCT+GGG | - | chr7_3:83949365-83949384 | None:intergenic | 45.0% |
| ! | AGCAGTGTCGAATACGAATC+TGG | - | chr7_3:83949366-83949385 | None:intergenic | 45.0% |
| !! | CATGAGTCATTGGTGCTGAT+TGG | + | chr7_3:83950305-83950324 | Msa1131390:CDS | 45.0% |
| TTGATCCATCCCAACACGTA+GGG | + | chr7_3:83950378-83950397 | Msa1131390:CDS | 45.0% | |
| AGGAACAATCCCTACGTGTT+GGG | - | chr7_3:83950390-83950409 | None:intergenic | 45.0% | |
| CTAAATGCTTGTCCGCAAGA+TGG | + | chr7_3:83950419-83950438 | Msa1131390:CDS | 45.0% | |
| GCTTCAGAATCTCCATCTTG+CGG | - | chr7_3:83950434-83950453 | None:intergenic | 45.0% | |
| ATCTCTAGGCACTCTAGATG+AGG | - | chr7_3:83950479-83950498 | None:intergenic | 45.0% | |
| CAGACAAATCCAAGAACTCG+AGG | - | chr7_3:83950559-83950578 | None:intergenic | 45.0% | |
| CTCGAGTTCTTGGATTTGTC+TGG | + | chr7_3:83950557-83950576 | Msa1131390:CDS | 45.0% | |
| TCAGTGTGAAAGACAGACCT+TGG | - | chr7_3:83950671-83950690 | None:intergenic | 45.0% | |
| GGTCTGTCTTTCACACTGAA+AGG | + | chr7_3:83950672-83950691 | Msa1131390:CDS | 45.0% | |
| CTAGTAGAAAGAAGATGGGG+TGG | - | chr7_3:83950797-83950816 | None:intergenic | 45.0% | |
| AAGAAGAAAGCGAAGCCGAG+TGG | + | chr7_3:83949086-83949105 | Msa1131390:CDS | 50.0% | |
| AGAAGAAAGCGAAGCCGAGT+GGG | + | chr7_3:83949087-83949106 | Msa1131390:CDS | 50.0% | |
| GTCGAATACGAATCTGGGTG+AGG | - | chr7_3:83949360-83949379 | None:intergenic | 50.0% | |
| CTCTCGCTCTTGTTGCTCAA+AGG | + | chr7_3:83949395-83949414 | Msa1131390:CDS | 50.0% | |
| GAGACTGCTTGGGAGAACTT+AGG | - | chr7_3:83949989-83950008 | None:intergenic | 50.0% | |
| CTTGATCCATCCCAACACGT+AGG | + | chr7_3:83950377-83950396 | Msa1131390:CDS | 50.0% | |
| ACAATCCCTACGTGTTGGGA+TGG | - | chr7_3:83950386-83950405 | None:intergenic | 50.0% | |
| CAGGAACAATCCCTACGTGT+TGG | - | chr7_3:83950391-83950410 | None:intergenic | 50.0% | |
| GAGGCCTTTCGCTGTAAACT+TGG | - | chr7_3:83950510-83950529 | None:intergenic | 50.0% | |
| GTGTCCTAACCTCGAGTTCT+TGG | + | chr7_3:83950547-83950566 | Msa1131390:CDS | 50.0% | |
| GTAGAAAGAAGATGGGGTGG+TGG | - | chr7_3:83950794-83950813 | None:intergenic | 50.0% | |
| AAGAAGAAAGCGAAGCCGAG+TGG | + | chr7_3:83949086-83949105 | Msa1131390:CDS | 50.0% | |
| AGAAGAAAGCGAAGCCGAGT+GGG | + | chr7_3:83949087-83949106 | Msa1131390:CDS | 50.0% | |
| GTCGAATACGAATCTGGGTG+AGG | - | chr7_3:83949360-83949379 | None:intergenic | 50.0% | |
| CTCTCGCTCTTGTTGCTCAA+AGG | + | chr7_3:83949395-83949414 | Msa1131390:CDS | 50.0% | |
| GAGACTGCTTGGGAGAACTT+AGG | - | chr7_3:83949989-83950008 | None:intergenic | 50.0% | |
| CTTGATCCATCCCAACACGT+AGG | + | chr7_3:83950377-83950396 | Msa1131390:CDS | 50.0% | |
| ACAATCCCTACGTGTTGGGA+TGG | - | chr7_3:83950386-83950405 | None:intergenic | 50.0% | |
| CAGGAACAATCCCTACGTGT+TGG | - | chr7_3:83950391-83950410 | None:intergenic | 50.0% | |
| GAGGCCTTTCGCTGTAAACT+TGG | - | chr7_3:83950510-83950529 | None:intergenic | 50.0% | |
| GTGTCCTAACCTCGAGTTCT+TGG | + | chr7_3:83950547-83950566 | Msa1131390:CDS | 50.0% | |
| GTAGAAAGAAGATGGGGTGG+TGG | - | chr7_3:83950794-83950813 | None:intergenic | 50.0% | |
| GAAGAAAGCGAAGCCGAGTG+GGG | + | chr7_3:83949088-83949107 | Msa1131390:CDS | 55.0% | |
| AACCACTCGAATCACCTCGC+TGG | + | chr7_3:83949266-83949285 | Msa1131390:CDS | 55.0% | |
| GAAGAAAGCGAAGCCGAGTG+GGG | + | chr7_3:83949088-83949107 | Msa1131390:CDS | 55.0% | |
| AACCACTCGAATCACCTCGC+TGG | + | chr7_3:83949266-83949285 | Msa1131390:CDS | 55.0% | |
| ACGAGTCAACTCGCCCCACT+CGG | - | chr7_3:83949104-83949123 | None:intergenic | 60.0% | |
| CACCAGCGAGGTGATTCGAG+TGG | - | chr7_3:83949271-83949290 | None:intergenic | 60.0% | |
| CACTCGAATCACCTCGCTGG+TGG | + | chr7_3:83949269-83949288 | Msa1131390:CDS | 60.0% | |
| AATTGGAGGGTCCACCAGCG+AGG | - | chr7_3:83949283-83949302 | None:intergenic | 60.0% | |
| ACGAGTCAACTCGCCCCACT+CGG | - | chr7_3:83949104-83949123 | None:intergenic | 60.0% | |
| CACCAGCGAGGTGATTCGAG+TGG | - | chr7_3:83949271-83949290 | None:intergenic | 60.0% | |
| CACTCGAATCACCTCGCTGG+TGG | + | chr7_3:83949269-83949288 | Msa1131390:CDS | 60.0% | |
| AATTGGAGGGTCCACCAGCG+AGG | - | chr7_3:83949283-83949302 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 83949032 | 83951117 | 83949032 | ID=Msa1131390;Name=Msa1131390 |
| chr7_3 | mRNA | 83949032 | 83951117 | 83949032 | ID=Msa1131390-mRNA-1;Parent=Msa1131390;Name=Msa1131390-mRNA-1;_AED=0.00;_eAED=0.00;_QI=50|1|1|1|1|1|2|366|302 |
| chr7_3 | exon | 83949032 | 83949416 | 83949032 | ID=Msa1131390-mRNA-1:exon:24891;Parent=Msa1131390-mRNA-1 |
| chr7_3 | exon | 83950178 | 83951117 | 83950178 | ID=Msa1131390-mRNA-1:exon:24892;Parent=Msa1131390-mRNA-1 |
| chr7_3 | five_prime_UTR | 83949032 | 83949081 | 83949032 | ID=Msa1131390-mRNA-1:five_prime_utr;Parent=Msa1131390-mRNA-1 |
| chr7_3 | CDS | 83949082 | 83949416 | 83949082 | ID=Msa1131390-mRNA-1:cds;Parent=Msa1131390-mRNA-1 |
| chr7_3 | CDS | 83950178 | 83950751 | 83950178 | ID=Msa1131390-mRNA-1:cds;Parent=Msa1131390-mRNA-1 |
| chr7_3 | three_prime_UTR | 83950752 | 83951117 | 83950752 | ID=Msa1131390-mRNA-1:three_prime_utr;Parent=Msa1131390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
