Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1139790 | RHN44565.1 | 98.077 | 52 | 1 | 0 | 1 | 52 | 1 | 52 | 1.01e-27 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1139790 | A0A396H0C5 | 98.077 | 52 | 1 | 0 | 1 | 52 | 1 | 52 | 4.83e-28 | 103 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026280 | Msa1139790 | 0.809973 | 1.451858e-50 | -8.615850e-47 |
| Msa0792480 | Msa1139790 | 0.834861 | 2.345510e-56 | -8.615850e-47 |
| Msa0837930 | Msa1139790 | 0.813245 | 2.821763e-51 | -8.615850e-47 |
| Msa0425710 | Msa1139790 | 0.825464 | 4.620352e-54 | -8.615850e-47 |
| Msa1009970 | Msa1139790 | 0.820042 | 8.450681e-53 | -8.615850e-47 |
| Msa1009990 | Msa1139790 | 0.821039 | 4.990923e-53 | -8.615850e-47 |
| Msa1051490 | Msa1139790 | 0.814769 | 1.301345e-51 | -8.615850e-47 |
| Msa1097650 | Msa1139790 | 0.820728 | 5.885064e-53 | -8.615850e-47 |
| Msa1139790 | Msa1139800 | 0.844569 | 6.970010e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1139790 | MtrunA17_Chr7g0220791 | 98.077 | 52 | 1 | 0 | 1 | 52 | 1 | 52 | 9.31e-32 | 103 |
| Msa1139790 | MtrunA17_Chr7g0220801 | 98.077 | 52 | 1 | 0 | 1 | 52 | 1 | 52 | 9.31e-32 | 103 |
| Msa1139790 | MtrunA17_Chr7g0220831 | 98.077 | 52 | 1 | 0 | 1 | 52 | 1 | 52 | 1.38e-31 | 103 |
| Msa1139790 | MtrunA17_Chr4g0020171 | 98.077 | 52 | 1 | 0 | 1 | 52 | 1 | 52 | 1.38e-31 | 103 |
| Msa1139790 | MtrunA17_Chr8g0368651 | 76.923 | 52 | 11 | 1 | 1 | 52 | 1 | 51 | 6.26e-17 | 66.2 |
| Msa1139790 | MtrunA17_Chr4g0021531 | 75.000 | 36 | 9 | 0 | 17 | 52 | 19 | 54 | 3.56e-16 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 139 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATGTGGCTCTCCTATTT+TGG | 0.163850 | 7_4:-10485162 | Msa1139790:three_prime_UTR |
| GAAACACACTTGTTCCTTAT+TGG | 0.179268 | 7_4:-10485423 | Msa1139790:three_prime_UTR |
| TGATTATGTTTACTGTTATC+AGG | 0.213232 | 7_4:-10486130 | Msa1139790:three_prime_UTR |
| GAGAATTAGGTTTCGGAGAT+TGG | 0.217278 | 7_4:+10488861 | None:intergenic |
| AATCTCGTCGATTTGGTCTT+TGG | 0.226001 | 7_4:+10487126 | None:intergenic |
| AAGTCACATATGTCAGATTT+TGG | 0.231849 | 7_4:+10486587 | None:intergenic |
| GCATAGCTGAATCCATCTTC+TGG | 0.235555 | 7_4:+10486494 | None:intergenic |
| TTCTCTCCGTTTCTCTCTTT+CGG | 0.241883 | 7_4:-10488821 | Msa1139790:five_prime_UTR |
| CGATGGAAGAGAAGAGAATT+AGG | 0.250470 | 7_4:+10488848 | None:intergenic |
| CGATTTCTTCTCAATGAATC+AGG | 0.253525 | 7_4:+10488666 | None:intergenic |
| CGCGGAAGCTTCATCTTTCC+TGG | 0.256495 | 7_4:-10486899 | Msa1139790:three_prime_UTR |
| AAATTTCCTTTGGAGGTTAA+AGG | 0.271383 | 7_4:-10486338 | Msa1139790:three_prime_UTR |
| CTTGATATTGATTAAAGTTA+TGG | 0.275169 | 7_4:-10485893 | Msa1139790:intron |
| TTCGGAGATTGGAATTGATT+TGG | 0.276556 | 7_4:+10488872 | None:intergenic |
| GCTGTTCTTGACAGCTATTT+TGG | 0.280170 | 7_4:-10486836 | Msa1139790:three_prime_UTR |
| TTCTCTGACCCTGCTGGATT+AGG | 0.287048 | 7_4:-10487163 | Msa1139790:three_prime_UTR |
| TGACTCGCTTAAATTTATTC+AGG | 0.295150 | 7_4:+10486100 | None:intergenic |
| ATCACGTGGTTTGTGTTTCC+TGG | 0.304061 | 7_4:+10485315 | None:intergenic |
| TCTTAACATTGCTGTGAAAT+TGG | 0.304884 | 7_4:-10486933 | Msa1139790:three_prime_UTR |
| TCGGAGATTGGAATTGATTT+GGG | 0.315049 | 7_4:+10488873 | None:intergenic |
| AACACATTCCAAGCCAAAAT+AGG | 0.315725 | 7_4:+10485149 | None:intergenic |
| GGTTTGATGACTAAGAATTC+TGG | 0.333324 | 7_4:-10486626 | Msa1139790:three_prime_UTR |
| TTGATATTGATTAAAGTTAT+GGG | 0.342816 | 7_4:-10485892 | Msa1139790:intron |
| ATTTATTTAGAAATATAATA+AGG | 0.343345 | 7_4:+10486027 | None:intergenic |
| TGAGAACGAGGAGGAAGTTA+AGG | 0.347960 | 7_4:-10486189 | Msa1139790:three_prime_UTR |
| GAGGAGGGAGGACAAGAAAA+AGG | 0.353170 | 7_4:+10487335 | None:intergenic |
| TACCATTCCTATAGCCAATA+AGG | 0.354506 | 7_4:+10485409 | None:intergenic |
| ATGCTGATAAGTCACAAATT+TGG | 0.357352 | 7_4:-10486775 | Msa1139790:three_prime_UTR |
| ACTTGTTCCTTATTGGCTAT+AGG | 0.366195 | 7_4:-10485416 | Msa1139790:three_prime_UTR |
| AAAACTTGACAAATTTCCTT+TGG | 0.369192 | 7_4:-10486348 | Msa1139790:three_prime_UTR |
| GTTTCAGAATCTCGTCGATT+TGG | 0.375966 | 7_4:+10487119 | None:intergenic |
| CATAGCTGAATCCATCTTCT+GGG | 0.386679 | 7_4:+10486495 | None:intergenic |
| GAGAGGAGCTTCGTACAAAA+AGG | 0.388362 | 7_4:+10487629 | None:intergenic |
| ACTTCGAATTTGAACCTTGC+GGG | 0.390896 | 7_4:-10486568 | Msa1139790:three_prime_UTR |
| GTATTTGTTTAATATGTGTT+TGG | 0.392123 | 7_4:-10485109 | Msa1139790:three_prime_UTR |
| TCAAGGCCATAGACAGCTTC+CGG | 0.398954 | 7_4:+10486716 | None:intergenic |
| AAGAGAAGAGAATTAGGTTT+CGG | 0.404590 | 7_4:+10488854 | None:intergenic |
| TCGGCAAGCTTAAGAATTGC+AGG | 0.407592 | 7_4:+10486959 | None:intergenic |
| AAAATCTCAGGATGGTTTGC+GGG | 0.408047 | 7_4:+10487419 | None:intergenic |
| GCTTCACCGGAAGCTGTCTA+TGG | 0.409050 | 7_4:-10486722 | Msa1139790:three_prime_UTR |
| AAATCTCTGAACGAACTTGT+TGG | 0.417597 | 7_4:-10486437 | Msa1139790:three_prime_UTR |
| GGTCTACTCTGAAATGTTGC+TGG | 0.418240 | 7_4:-10486220 | Msa1139790:three_prime_UTR |
| CGTACCTTTGTTCGAAATGA+TGG | 0.419044 | 7_4:-10486257 | Msa1139790:three_prime_UTR |
| TTCTAATACGTCAATGCACT+TGG | 0.422787 | 7_4:-10485260 | Msa1139790:three_prime_UTR |
| AACCAGTCATGCACATTTCA+AGG | 0.440811 | 7_4:+10486699 | None:intergenic |
| TAAGGAACAAGTGTGTTTCC+TGG | 0.442570 | 7_4:+10485427 | None:intergenic |
| ACTTGACAAATTTCCTTTGG+AGG | 0.442578 | 7_4:-10486345 | Msa1139790:three_prime_UTR |
| TGACTAAGAATTCTGGAATC+AGG | 0.442912 | 7_4:-10486619 | Msa1139790:three_prime_UTR |
| TTCTGGGGTGACATGGATAG+TGG | 0.444514 | 7_4:+10486511 | None:intergenic |
| TACTCGATGAACGGAATTGA+AGG | 0.451132 | 7_4:-10486545 | Msa1139790:three_prime_UTR |
| TGAGGGAAGGATTGAGCTCC+AGG | 0.451159 | 7_4:+10486881 | None:intergenic |
| GATTATGTTTACTGTTATCA+GGG | 0.461194 | 7_4:-10486129 | Msa1139790:three_prime_UTR |
| GGCCTTGAAATGTGCATGAC+TGG | 0.467615 | 7_4:-10486701 | Msa1139790:three_prime_UTR |
| ATCCATGTCACCCCAGAAGA+TGG | 0.468783 | 7_4:-10486506 | Msa1139790:three_prime_UTR |
| AAGGAGATATAATACTACTT+TGG | 0.470394 | 7_4:-10486170 | Msa1139790:three_prime_UTR |
| TGTGAACTTGTGGCTAGAAA+TGG | 0.474140 | 7_4:-10485367 | Msa1139790:three_prime_UTR |
| ATACATACACGTATAGCTTC+AGG | 0.475006 | 7_4:+10485066 | None:intergenic |
| GTGAAGTGTGAATGAACTAA+TGG | 0.476790 | 7_4:-10487694 | Msa1139790:exon |
| TTCCTTATTGGCTATAGGAA+TGG | 0.478303 | 7_4:-10485411 | Msa1139790:three_prime_UTR |
| AAGACAGATGCATCTTCAGC+AGG | 0.478706 | 7_4:-10486647 | Msa1139790:three_prime_UTR |
| TTTGGTCTTTGGACAATGCT+CGG | 0.491233 | 7_4:+10487137 | None:intergenic |
| TCAACAATGGTGCATTCTGC+TGG | 0.497159 | 7_4:+10487097 | None:intergenic |
| GTTTGTGTTTCCTGGTCCTA+CGG | 0.497609 | 7_4:+10485323 | None:intergenic |
| AAGCAATTTCGTAGTCCCGC+AGG | 0.513037 | 7_4:+10486991 | None:intergenic |
| TACAGAAATGAAGGAAATTG+AGG | 0.513480 | 7_4:+10488797 | None:intergenic |
| GAAAGGATCAATGAAGTGCT+TGG | 0.514175 | 7_4:-10486302 | Msa1139790:three_prime_UTR |
| CTCTGAACGAACTTGTTGGA+AGG | 0.516546 | 7_4:-10486433 | Msa1139790:three_prime_UTR |
| GCTCGGAGGCCTAATCCAGC+AGG | 0.517190 | 7_4:+10487154 | None:intergenic |
| TCATGGTCATCTTGACTCAA+AGG | 0.518087 | 7_4:+10487254 | None:intergenic |
| CACAGCAATGTTAAGACCAT+CGG | 0.522381 | 7_4:+10486940 | None:intergenic |
| AAATGCACTTACAGAAATGA+AGG | 0.523434 | 7_4:+10488788 | None:intergenic |
| TACATACACGTATAGCTTCA+GGG | 0.526318 | 7_4:+10485067 | None:intergenic |
| AAGGATACAACTGTGGAGAA+AGG | 0.528377 | 7_4:-10486319 | Msa1139790:three_prime_UTR |
| GACTGGTTTAGATAAAGAAA+AGG | 0.528480 | 7_4:-10486684 | Msa1139790:three_prime_UTR |
| CATCACCCATCATGTAAGCT+TGG | 0.530202 | 7_4:+10486795 | None:intergenic |
| TTGTATCCTTTAACCTCCAA+AGG | 0.534196 | 7_4:+10486332 | None:intergenic |
| ATTCAATCATCAAACGATGA+TGG | 0.535335 | 7_4:-10485977 | Msa1139790:three_prime_UTR |
| GTCAAGAACAGCAACTTCCT+CGG | 0.536338 | 7_4:+10486847 | None:intergenic |
| ATCCATCTTCTGGGGTGACA+TGG | 0.537196 | 7_4:+10486504 | None:intergenic |
| TCTAATACGTCAATGCACTT+GGG | 0.541123 | 7_4:-10485259 | Msa1139790:three_prime_UTR |
| TCTGAACGAACTTGTTGGAA+GGG | 0.547830 | 7_4:-10486432 | Msa1139790:three_prime_UTR |
| TGCTAAGCTAGAAGCTTCAC+CGG | 0.548799 | 7_4:-10486735 | Msa1139790:three_prime_UTR |
| AACTTATCATCAAAACCTGC+GGG | 0.549743 | 7_4:-10487006 | Msa1139790:three_prime_UTR |
| CTATGCAAGCTTTGAAGCAG+TGG | 0.552481 | 7_4:-10486477 | Msa1139790:three_prime_UTR |
| AATCGAATCTCCGTAGGACC+AGG | 0.559132 | 7_4:-10485333 | Msa1139790:three_prime_UTR |
| ATTGAAGACGTTCGACCCAA+CGG | 0.561423 | 7_4:-10487597 | Msa1139790:CDS |
| TGATAGCATATCTAATCTAA+AGG | 0.565117 | 7_4:+10485291 | None:intergenic |
| AATGAAGTGCTTGGAGAAGA+CGG | 0.567752 | 7_4:-10486293 | Msa1139790:three_prime_UTR |
| TTGGTTAATCGAATCTCCGT+AGG | 0.569588 | 7_4:-10485339 | Msa1139790:three_prime_UTR |
| TGAAGCTTCTAGCTTAGCAC+TGG | 0.569748 | 7_4:+10486739 | None:intergenic |
| CCGTTCATCGAGTACCCGCA+AGG | 0.572227 | 7_4:+10486554 | None:intergenic |
| GTTGTTACGATGTGAGGAGA+TGG | 0.572880 | 7_4:+10488895 | None:intergenic |
| CGGTAGCCAAGCTTACATGA+TGG | 0.573036 | 7_4:-10486801 | Msa1139790:three_prime_UTR |
| CAACATTTCAGAGTAGACCT+TGG | 0.577948 | 7_4:+10486224 | None:intergenic |
| CATCATGTAAGCTTGGCTAC+CGG | 0.578005 | 7_4:+10486802 | None:intergenic |
| TGAGGACCGAAAGAGAGAAA+CGG | 0.578571 | 7_4:+10488815 | None:intergenic |
| TTGTTACGATGTGAGGAGAT+GGG | 0.580348 | 7_4:+10488896 | None:intergenic |
| GAAACGGAGAGAAAGAGCGA+TGG | 0.585934 | 7_4:+10488831 | None:intergenic |
| ATATTTCTCAAAGCAATACA+TGG | 0.587437 | 7_4:+10486001 | None:intergenic |
| GCATTGCACATTGATGCAAA+TGG | 0.589627 | 7_4:-10486374 | Msa1139790:three_prime_UTR |
| TTTGTAGAGAAAGGGAACAA+AGG | 0.590513 | 7_4:+10487295 | None:intergenic |
| GCAATTCTTAAGCTTGCCGA+TGG | 0.593187 | 7_4:-10486956 | Msa1139790:three_prime_UTR |
| GGTAGCCAAGCTTACATGAT+GGG | 0.595267 | 7_4:-10486800 | Msa1139790:three_prime_UTR |
| TTGGCTATAGGAATGGTATG+AGG | 0.600434 | 7_4:-10485404 | Msa1139790:three_prime_UTR |
| AGAAATCGAGAAGCATAGAT+CGG | 0.600822 | 7_4:-10488651 | Msa1139790:five_prime_UTR |
| TATGCAAGCTTTGAAGCAGT+GGG | 0.601223 | 7_4:-10486476 | Msa1139790:three_prime_UTR |
| ACCATGACAAACTCAGCTAT+CGG | 0.606560 | 7_4:-10487238 | Msa1139790:three_prime_UTR |
| ATTTGGGTTGTTACGATGTG+AGG | 0.608367 | 7_4:+10488889 | None:intergenic |
| AATGCAACAGAAAACTCAGC+TGG | 0.608895 | 7_4:+10486392 | None:intergenic |
| ATGATGGCTGCACATCTCCA+AGG | 0.613417 | 7_4:-10486241 | Msa1139790:three_prime_UTR |
| AATGAACTAATGGAGTCTAA+AGG | 0.613513 | 7_4:-10487684 | Msa1139790:exon |
| ACCGATAGCTGAGTTTGTCA+TGG | 0.615180 | 7_4:+10487237 | None:intergenic |
| CTAATACGTCAATGCACTTG+GGG | 0.617154 | 7_4:-10485258 | Msa1139790:three_prime_UTR |
| AAAGTTACGTTGTGAACTTG+TGG | 0.617428 | 7_4:-10485377 | Msa1139790:three_prime_UTR |
| TCCTCGGAAAAGCTTCGATG+AGG | 0.618294 | 7_4:+10486863 | None:intergenic |
| CCTCGGAAAAGCTTCGATGA+GGG | 0.624053 | 7_4:+10486864 | None:intergenic |
| GGAAAAGCTTCGATGAGGGA+AGG | 0.627007 | 7_4:+10486868 | None:intergenic |
| CCTTGCGGGTACTCGATGAA+CGG | 0.629304 | 7_4:-10486554 | Msa1139790:three_prime_UTR |
| AACATGCAAAGTACATTGCT+AGG | 0.631536 | 7_4:-10485207 | Msa1139790:three_prime_UTR |
| ATTAGATAGTGAGTCAACAA+TGG | 0.640442 | 7_4:+10487084 | None:intergenic |
| GAACTAATGGAGTCTAAAGG+TGG | 0.640546 | 7_4:-10487681 | Msa1139790:exon |
| GACTTCGAATTTGAACCTTG+CGG | 0.643472 | 7_4:-10486569 | Msa1139790:three_prime_UTR |
| CGGCAAGCTTAAGAATTGCA+GGG | 0.643796 | 7_4:+10486960 | None:intergenic |
| AAACTTATCATCAAAACCTG+CGG | 0.648431 | 7_4:-10487007 | Msa1139790:three_prime_UTR |
| CTGGAGTGAGGATGAGAACG+AGG | 0.648538 | 7_4:-10486201 | Msa1139790:three_prime_UTR |
| TCTGAAATGTTGCTGGAGTG+AGG | 0.649297 | 7_4:-10486213 | Msa1139790:three_prime_UTR |
| GCAGCCATCATTTCGAACAA+AGG | 0.652571 | 7_4:+10486253 | None:intergenic |
| CATCATTTCGAACAAAGGTA+CGG | 0.654774 | 7_4:+10486258 | None:intergenic |
| ATAGATGAATAAGCTTGACT+CGG | 0.663143 | 7_4:+10487036 | None:intergenic |
| GGTCTTTGGACAATGCTCGG+AGG | 0.663736 | 7_4:+10487140 | None:intergenic |
| CTCGGAGGCCTAATCCAGCA+GGG | 0.668437 | 7_4:+10487155 | None:intergenic |
| GACAGCATTGAGAACACATG+TGG | 0.669414 | 7_4:-10485176 | Msa1139790:three_prime_UTR |
| GAGGTTAAAGGATACAACTG+TGG | 0.681618 | 7_4:-10486326 | Msa1139790:three_prime_UTR |
| ATAGCTGAATCCATCTTCTG+GGG | 0.683255 | 7_4:+10486496 | None:intergenic |
| GAGTGAGGATGAGAACGAGG+AGG | 0.703166 | 7_4:-10486198 | Msa1139790:three_prime_UTR |
| GAAGACGTTCGACCCAACGG+TGG | 0.734466 | 7_4:-10487594 | Msa1139790:CDS |
| TCTAATCTAAAGGAATCACG+TGG | 0.749503 | 7_4:+10485301 | None:intergenic |
| TCTTCAATGATGTAACCGAG+AGG | 0.771142 | 7_4:+10487612 | None:intergenic |
| AAATTGGTGAGATACACTCG+CGG | 0.784620 | 7_4:-10486917 | Msa1139790:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATGTTAAAATTAATCAA+AGG | + | chr7_4:10486466-10486485 | None:intergenic | 10.0% |
| !! | TATAGTATATAGTATAAGAT+TGG | - | chr7_4:10486483-10486502 | Msa1139790:three_prime_UTR | 15.0% |
| !!! | TTGATATTGATTAAAGTTAT+GGG | - | chr7_4:10488083-10488102 | Msa1139790:intron | 15.0% |
| !! | CAATTGAGAAGAATAAATAA+AGG | + | chr7_4:10485218-10485237 | None:intergenic | 20.0% |
| !!! | CATGATTATTTTCCAATTTT+TGG | - | chr7_4:10485505-10485524 | Msa1139790:intron | 20.0% |
| !! | TTTCATAATCATCCAAAAAT+TGG | + | chr7_4:10485520-10485539 | None:intergenic | 20.0% |
| !! | AAAGGAATTGAAATTGAAAT+GGG | + | chr7_4:10486448-10486467 | None:intergenic | 20.0% |
| !! | ACTGCATAATAAAGAAAAAA+GGG | + | chr7_4:10486533-10486552 | None:intergenic | 20.0% |
| !!! | CTTGATATTGATTAAAGTTA+TGG | - | chr7_4:10488082-10488101 | Msa1139790:intron | 20.0% |
| !! | AATTATTCAGATTTATCAGA+TGG | - | chr7_4:10488127-10488146 | Msa1139790:intron | 20.0% |
| !!! | ATTTATTCACTTTTTCTATG+TGG | - | chr7_4:10488318-10488337 | Msa1139790:intron | 20.0% |
| !!! | ATTTATTCACTTTTTCTATG+TGG | - | chr7_4:10488318-10488337 | Msa1139790:intron | 20.0% |
| !! | GTATTTGTTTAATATGTGTT+TGG | - | chr7_4:10488866-10488885 | Msa1139790:five_prime_UTR | 20.0% |
| !!! | GTTTTGATTTTGTCTGATTT+AGG | - | chr7_4:10485273-10485292 | Msa1139790:three_prime_UTR | 25.0% |
| !! | ACTCACAGTTTTTAAACAAT+TGG | + | chr7_4:10485353-10485372 | None:intergenic | 25.0% |
| !!! | CTGTTTTAGGTTATTGTTTA+TGG | - | chr7_4:10485401-10485420 | Msa1139790:three_prime_UTR | 25.0% |
| !! | TAGGTTATTGTTTATGGTTT+TGG | - | chr7_4:10485407-10485426 | Msa1139790:three_prime_UTR | 25.0% |
| !! | AAAGCATTTGATGATTGAAA+CGG | - | chr7_4:10485636-10485655 | Msa1139790:intron | 25.0% |
| ! | CAGAAATCAACAATAAGAAA+AGG | + | chr7_4:10485741-10485760 | None:intergenic | 25.0% |
| !!! | CTTTTCTGTTTGTTTTCATT+TGG | - | chr7_4:10485852-10485871 | Msa1139790:intron | 25.0% |
| ! | ATTTACACTTTCAATTGCAA+TGG | - | chr7_4:10485887-10485906 | Msa1139790:intron | 25.0% |
| ! | TGTTCAAGATGTATTATTTC+AGG | - | chr7_4:10485939-10485958 | Msa1139790:three_prime_UTR | 25.0% |
| ! | TTCCAATTGTTATGTGAAAT+TGG | - | chr7_4:10486107-10486126 | Msa1139790:three_prime_UTR | 25.0% |
| ! | TACCAATTTCACATAACAAT+TGG | + | chr7_4:10486112-10486131 | None:intergenic | 25.0% |
| !! | TTATAACATTTTGTAATCCC+TGG | - | chr7_4:10486215-10486234 | Msa1139790:three_prime_UTR | 25.0% |
| ! | CAAAGGAATTGAAATTGAAA+TGG | + | chr7_4:10486449-10486468 | None:intergenic | 25.0% |
| !! | TAGTATAAGATTGGTTGATT+TGG | - | chr7_4:10486492-10486511 | Msa1139790:three_prime_UTR | 25.0% |
| ! | CACTGCATAATAAAGAAAAA+AGG | + | chr7_4:10486534-10486553 | None:intergenic | 25.0% |
| !!! | TTTTGTTGTTTGTAGAGAAA+GGG | + | chr7_4:10486691-10486710 | None:intergenic | 25.0% |
| !!! | TTTTTGTTGTTTGTAGAGAA+AGG | + | chr7_4:10486692-10486711 | None:intergenic | 25.0% |
| !!! | GAGATAACTTTTTTCGAAAA+CGG | - | chr7_4:10486785-10486804 | Msa1139790:three_prime_UTR | 25.0% |
| ! | AAAACTTGACAAATTTCCTT+TGG | - | chr7_4:10487627-10487646 | Msa1139790:CDS | 25.0% |
| ! | AAGGAGATATAATACTACTT+TGG | - | chr7_4:10487805-10487824 | Msa1139790:intron | 25.0% |
| ! | TGATTATGTTTACTGTTATC+AGG | - | chr7_4:10487845-10487864 | Msa1139790:intron | 25.0% |
| ! | GATTATGTTTACTGTTATCA+GGG | - | chr7_4:10487846-10487865 | Msa1139790:intron | 25.0% |
| ! | ATATTTCTCAAAGCAATACA+TGG | + | chr7_4:10487977-10487996 | None:intergenic | 25.0% |
| !!! | CTTTTATTTTTGCAACAATG+GGG | + | chr7_4:10488024-10488043 | None:intergenic | 25.0% |
| !!! | CCTTTTATTTTTGCAACAAT+GGG | + | chr7_4:10488025-10488044 | None:intergenic | 25.0% |
| !!! | TCCTTTTATTTTTGCAACAA+TGG | + | chr7_4:10488026-10488045 | None:intergenic | 25.0% |
| ! | TAAAGTTATTGCAATGTTGT+TGG | + | chr7_4:10488288-10488307 | None:intergenic | 25.0% |
| ! | TAAAGTTATTGCAATGTTGT+TGG | + | chr7_4:10488288-10488307 | None:intergenic | 25.0% |
| ! | TGATAGCATATCTAATCTAA+AGG | + | chr7_4:10488687-10488706 | None:intergenic | 25.0% |
| AAGAGAAGAGAATTAGGTTT+CGG | + | chr7_4:10485124-10485143 | None:intergenic | 30.0% | |
| TACAGAAATGAAGGAAATTG+AGG | + | chr7_4:10485181-10485200 | None:intergenic | 30.0% | |
| AAATGCACTTACAGAAATGA+AGG | + | chr7_4:10485190-10485209 | None:intergenic | 30.0% | |
| ATCAGACAAAATCAAAACAG+AGG | + | chr7_4:10485271-10485290 | None:intergenic | 30.0% | |
| !!! | TCATCTTTTTGTGCTGTTTT+AGG | - | chr7_4:10485388-10485407 | Msa1139790:three_prime_UTR | 30.0% |
| !!! | ATGTTTTGAAACGCATTTGA+TGG | - | chr7_4:10485579-10485598 | Msa1139790:intron | 30.0% |
| ! | TTGTTTTCATTTGGTTGCAT+AGG | - | chr7_4:10485861-10485880 | Msa1139790:intron | 30.0% |
| GTACGATCATTTACCAATAT+TGG | - | chr7_4:10485909-10485928 | Msa1139790:three_prime_UTR | 30.0% | |
| TGAACAACATACACCAATAT+TGG | + | chr7_4:10485925-10485944 | None:intergenic | 30.0% | |
| AACAATGCATGTGTCAATAT+TGG | + | chr7_4:10486145-10486164 | None:intergenic | 30.0% | |
| TTAGTCACAAAAATAGACCA+GGG | + | chr7_4:10486235-10486254 | None:intergenic | 30.0% | |
| AATGAACTAATGGAGTCTAA+AGG | - | chr7_4:10486291-10486310 | Msa1139790:three_prime_UTR | 30.0% | |
| !!! | AAACCATCCTGAGATTTTTT+GGG | - | chr7_4:10486561-10486580 | Msa1139790:three_prime_UTR | 30.0% |
| !!! | TGGGTTCTGATTTAGTTTTT+AGG | - | chr7_4:10486580-10486599 | Msa1139790:three_prime_UTR | 30.0% |
| ATTAGATAGTGAGTCAACAA+TGG | + | chr7_4:10486894-10486913 | None:intergenic | 30.0% | |
| ATAGATGAATAAGCTTGACT+CGG | + | chr7_4:10486942-10486961 | None:intergenic | 30.0% | |
| AAACTTATCATCAAAACCTG+CGG | - | chr7_4:10486968-10486987 | Msa1139790:three_prime_UTR | 30.0% | |
| TCTTAACATTGCTGTGAAAT+TGG | - | chr7_4:10487042-10487061 | Msa1139790:three_prime_UTR | 30.0% | |
| ATGCTGATAAGTCACAAATT+TGG | - | chr7_4:10487200-10487219 | Msa1139790:three_prime_UTR | 30.0% | |
| !! | GACTGGTTTAGATAAAGAAA+AGG | - | chr7_4:10487291-10487310 | Msa1139790:three_prime_UTR | 30.0% |
| ! | AAGTCACATATGTCAGATTT+TGG | + | chr7_4:10487391-10487410 | None:intergenic | 30.0% |
| ! | AAATTTCCTTTGGAGGTTAA+AGG | - | chr7_4:10487637-10487656 | Msa1139790:CDS | 30.0% |
| TGACTCGCTTAAATTTATTC+AGG | + | chr7_4:10487878-10487897 | None:intergenic | 30.0% | |
| ATTCAATCATCAAACGATGA+TGG | - | chr7_4:10487998-10488017 | Msa1139790:intron | 30.0% | |
| CCCATTGTTGCAAAAATAAA+AGG | - | chr7_4:10488022-10488041 | Msa1139790:intron | 30.0% | |
| !!! | ATTTTTTCTCCGCTCTTATT+GGG | + | chr7_4:10488187-10488206 | None:intergenic | 30.0% |
| !!! | AATTTTTTCTCCGCTCTTAT+TGG | + | chr7_4:10488188-10488207 | None:intergenic | 30.0% |
| TGTGATGTGCCTAAAATAAT+AGG | - | chr7_4:10488342-10488361 | Msa1139790:intron | 30.0% | |
| TGCCTAAAATAATAGGTATG+TGG | - | chr7_4:10488349-10488368 | Msa1139790:intron | 30.0% | |
| ! | TGCCACATACCTATTATTTT+AGG | + | chr7_4:10488354-10488373 | None:intergenic | 30.0% |
| TGTGATGTGCCTAAAATAAT+AGG | - | chr7_4:10488342-10488361 | Msa1139790:intron | 30.0% | |
| TGCCTAAAATAATAGGTATG+TGG | - | chr7_4:10488349-10488368 | Msa1139790:intron | 30.0% | |
| ! | AGCCACATACCTATTATTTT+AGG | + | chr7_4:10488466-10488485 | None:intergenic | 30.0% |
| AATAATAGGTATGTGGCTAT+AGG | - | chr7_4:10488468-10488487 | Msa1139790:intron | 30.0% | |
| ! | TATGTGTTTGGATCAGTTTT+TGG | - | chr7_4:10488878-10488897 | Msa1139790:five_prime_UTR | 30.0% |
| ! | TCGGAGATTGGAATTGATTT+GGG | + | chr7_4:10485105-10485124 | None:intergenic | 35.0% |
| TTCGGAGATTGGAATTGATT+TGG | + | chr7_4:10485106-10485125 | None:intergenic | 35.0% | |
| CGATTTCTTCTCAATGAATC+AGG | + | chr7_4:10485312-10485331 | None:intergenic | 35.0% | |
| ! | AGAAATCGAGAAGCATAGAT+CGG | - | chr7_4:10485324-10485343 | Msa1139790:three_prime_UTR | 35.0% |
| ! | TTTGATGATTGAAACGGATC+TGG | - | chr7_4:10485642-10485661 | Msa1139790:intron | 35.0% |
| ! | TTGATGATTGAAACGGATCT+GGG | - | chr7_4:10485643-10485662 | Msa1139790:intron | 35.0% |
| TTACAGATACCACACAGATT+TGG | - | chr7_4:10485789-10485808 | Msa1139790:intron | 35.0% | |
| GTTAGTCACAAAAATAGACC+AGG | + | chr7_4:10486236-10486255 | None:intergenic | 35.0% | |
| GTGAAGTGTGAATGAACTAA+TGG | - | chr7_4:10486281-10486300 | Msa1139790:three_prime_UTR | 35.0% | |
| AAAAATCTCAGGATGGTTTG+CGG | + | chr7_4:10486560-10486579 | None:intergenic | 35.0% | |
| !!! | CAAACCATCCTGAGATTTTT+TGG | - | chr7_4:10486560-10486579 | Msa1139790:three_prime_UTR | 35.0% |
| ATCAGAACCCAAAAAATCTC+AGG | + | chr7_4:10486571-10486590 | None:intergenic | 35.0% | |
| GAAGAAAAAAGCAAAGAGGA+GGG | + | chr7_4:10486658-10486677 | None:intergenic | 35.0% | |
| TGAAGAAAAAAGCAAAGAGG+AGG | + | chr7_4:10486659-10486678 | None:intergenic | 35.0% | |
| GGTTGAAGAAAAAAGCAAAG+AGG | + | chr7_4:10486662-10486681 | None:intergenic | 35.0% | |
| TTTGTAGAGAAAGGGAACAA+AGG | + | chr7_4:10486683-10486702 | None:intergenic | 35.0% | |
| !!! | GTTTTGAAGGCTATGAAAAG+AGG | - | chr7_4:10486759-10486778 | Msa1139790:three_prime_UTR | 35.0% |
| AACTTATCATCAAAACCTGC+GGG | - | chr7_4:10486969-10486988 | Msa1139790:three_prime_UTR | 35.0% | |
| ! | GGTTTGATGACTAAGAATTC+TGG | - | chr7_4:10487349-10487368 | Msa1139790:three_prime_UTR | 35.0% |
| !! | TGACTAAGAATTCTGGAATC+AGG | - | chr7_4:10487356-10487375 | Msa1139790:three_prime_UTR | 35.0% |
| ! | CACATATGTCAGATTTTGGA+AGG | + | chr7_4:10487387-10487406 | None:intergenic | 35.0% |
| AAATCTCTGAACGAACTTGT+TGG | - | chr7_4:10487538-10487557 | Msa1139790:intron | 35.0% | |
| ACTTGACAAATTTCCTTTGG+AGG | - | chr7_4:10487630-10487649 | Msa1139790:CDS | 35.0% | |
| TTGTATCCTTTAACCTCCAA+AGG | + | chr7_4:10487646-10487665 | None:intergenic | 35.0% | |
| CATCATTTCGAACAAAGGTA+CGG | + | chr7_4:10487720-10487739 | None:intergenic | 35.0% | |
| !!! | TTTTTTCTCCGCTCTTATTG+GGG | + | chr7_4:10488186-10488205 | None:intergenic | 35.0% |
| ACTTGTGGCTAGAAATGAAA+TGG | - | chr7_4:10488499-10488518 | Msa1139790:intron | 35.0% | |
| GAAACACACTTGTTCCTTAT+TGG | - | chr7_4:10488552-10488571 | Msa1139790:intron | 35.0% | |
| ! | ACTTGTTCCTTATTGGCTAT+AGG | - | chr7_4:10488559-10488578 | Msa1139790:intron | 35.0% |
| ! | TTCCTTATTGGCTATAGGAA+TGG | - | chr7_4:10488564-10488583 | Msa1139790:intron | 35.0% |
| TACCATTCCTATAGCCAATA+AGG | + | chr7_4:10488569-10488588 | None:intergenic | 35.0% | |
| AAAGTTACGTTGTGAACTTG+TGG | - | chr7_4:10488598-10488617 | Msa1139790:intron | 35.0% | |
| TCTAATCTAAAGGAATCACG+TGG | + | chr7_4:10488677-10488696 | None:intergenic | 35.0% | |
| TTCTAATACGTCAATGCACT+TGG | - | chr7_4:10488715-10488734 | Msa1139790:intron | 35.0% | |
| TCTAATACGTCAATGCACTT+GGG | - | chr7_4:10488716-10488735 | Msa1139790:intron | 35.0% | |
| AACATGCAAAGTACATTGCT+AGG | - | chr7_4:10488768-10488787 | Msa1139790:intron | 35.0% | |
| AACACATTCCAAGCCAAAAT+AGG | + | chr7_4:10488829-10488848 | None:intergenic | 35.0% | |
| TTGTTACGATGTGAGGAGAT+GGG | + | chr7_4:10485082-10485101 | None:intergenic | 40.0% | |
| !! | ATTTGGGTTGTTACGATGTG+AGG | + | chr7_4:10485089-10485108 | None:intergenic | 40.0% |
| GAGAATTAGGTTTCGGAGAT+TGG | + | chr7_4:10485117-10485136 | None:intergenic | 40.0% | |
| CGATGGAAGAGAAGAGAATT+AGG | + | chr7_4:10485130-10485149 | None:intergenic | 40.0% | |
| TTCTCTCCGTTTCTCTCTTT+CGG | - | chr7_4:10485154-10485173 | Msa1139790:three_prime_UTR | 40.0% | |
| GAACTAATGGAGTCTAAAGG+TGG | - | chr7_4:10486294-10486313 | Msa1139790:three_prime_UTR | 40.0% | |
| ! | TTTTTGTACGAAGCTCCTCT+CGG | - | chr7_4:10486348-10486367 | Msa1139790:three_prime_UTR | 40.0% |
| TCTTCAATGATGTAACCGAG+AGG | + | chr7_4:10486366-10486385 | None:intergenic | 40.0% | |
| ! | AATTTTTCTACGCCACCGTT+GGG | + | chr7_4:10486396-10486415 | None:intergenic | 40.0% |
| ! | AAAATCTCAGGATGGTTTGC+GGG | + | chr7_4:10486559-10486578 | None:intergenic | 40.0% |
| GAACCCAAAAAATCTCAGGA+TGG | + | chr7_4:10486567-10486586 | None:intergenic | 40.0% | |
| TCATGGTCATCTTGACTCAA+AGG | + | chr7_4:10486724-10486743 | None:intergenic | 40.0% | |
| ACCATGACAAACTCAGCTAT+CGG | - | chr7_4:10486737-10486756 | Msa1139790:three_prime_UTR | 40.0% | |
| !!! | AACTCAGCTATCGGTTTTGA+AGG | - | chr7_4:10486746-10486765 | Msa1139790:three_prime_UTR | 40.0% |
| ! | TTTGGTCTTTGGACAATGCT+CGG | + | chr7_4:10486841-10486860 | None:intergenic | 40.0% |
| !! | AATCTCGTCGATTTGGTCTT+TGG | + | chr7_4:10486852-10486871 | None:intergenic | 40.0% |
| ! | GTTTCAGAATCTCGTCGATT+TGG | + | chr7_4:10486859-10486878 | None:intergenic | 40.0% |
| CACAGCAATGTTAAGACCAT+CGG | + | chr7_4:10487038-10487057 | None:intergenic | 40.0% | |
| AAATTGGTGAGATACACTCG+CGG | - | chr7_4:10487058-10487077 | Msa1139790:three_prime_UTR | 40.0% | |
| ! | GCTGTTCTTGACAGCTATTT+TGG | - | chr7_4:10487139-10487158 | Msa1139790:three_prime_UTR | 40.0% |
| !!! | TGACAGCTATTTTGGCAAAC+TGG | - | chr7_4:10487147-10487166 | Msa1139790:three_prime_UTR | 40.0% |
| !!! | GACAGCTATTTTGGCAAACT+GGG | - | chr7_4:10487148-10487167 | Msa1139790:three_prime_UTR | 40.0% |
| !!! | TATTTTGGCAAACTGGGTTC+CGG | - | chr7_4:10487154-10487173 | Msa1139790:three_prime_UTR | 40.0% |
| AACCAGTCATGCACATTTCA+AGG | + | chr7_4:10487279-10487298 | None:intergenic | 40.0% | |
| GACTTCGAATTTGAACCTTG+CGG | - | chr7_4:10487406-10487425 | Msa1139790:exon | 40.0% | |
| ACTTCGAATTTGAACCTTGC+GGG | - | chr7_4:10487407-10487426 | Msa1139790:exon | 40.0% | |
| TACTCGATGAACGGAATTGA+AGG | - | chr7_4:10487430-10487449 | Msa1139790:intron | 40.0% | |
| ATAGCTGAATCCATCTTCTG+GGG | + | chr7_4:10487482-10487501 | None:intergenic | 40.0% | |
| CATAGCTGAATCCATCTTCT+GGG | + | chr7_4:10487483-10487502 | None:intergenic | 40.0% | |
| !! | TATGCAAGCTTTGAAGCAGT+GGG | - | chr7_4:10487499-10487518 | Msa1139790:intron | 40.0% |
| !! | TCTGAACGAACTTGTTGGAA+GGG | - | chr7_4:10487543-10487562 | Msa1139790:intron | 40.0% |
| AATGCAACAGAAAACTCAGC+TGG | + | chr7_4:10487586-10487605 | None:intergenic | 40.0% | |
| GCATTGCACATTGATGCAAA+TGG | - | chr7_4:10487601-10487620 | Msa1139790:CDS | 40.0% | |
| GAGGTTAAAGGATACAACTG+TGG | - | chr7_4:10487649-10487668 | Msa1139790:CDS | 40.0% | |
| AAGGATACAACTGTGGAGAA+AGG | - | chr7_4:10487656-10487675 | Msa1139790:CDS | 40.0% | |
| ! | GAAAGGATCAATGAAGTGCT+TGG | - | chr7_4:10487673-10487692 | Msa1139790:CDS | 40.0% |
| ! | AATGAAGTGCTTGGAGAAGA+CGG | - | chr7_4:10487682-10487701 | Msa1139790:exon | 40.0% |
| CGTACCTTTGTTCGAAATGA+TGG | - | chr7_4:10487718-10487737 | Msa1139790:intron | 40.0% | |
| CAACATTTCAGAGTAGACCT+TGG | + | chr7_4:10487754-10487773 | None:intergenic | 40.0% | |
| ! | GATTTGTTCCCCAATAAGAG+CGG | - | chr7_4:10488175-10488194 | Msa1139790:intron | 40.0% |
| AGCTTTACATGCATCGTATG+TGG | - | chr7_4:10488237-10488256 | Msa1139790:intron | 40.0% | |
| CTATAGGAGTTGTGAACTTG+TGG | - | chr7_4:10488484-10488503 | Msa1139790:intron | 40.0% | |
| GGCTAGAAATGAAATGGTGT+TGG | - | chr7_4:10488505-10488524 | Msa1139790:intron | 40.0% | |
| TTGGTTAATCGAATCTCCGT+AGG | - | chr7_4:10488524-10488543 | Msa1139790:intron | 40.0% | |
| TAAGGAACAAGTGTGTTTCC+TGG | + | chr7_4:10488551-10488570 | None:intergenic | 40.0% | |
| TTGGCTATAGGAATGGTATG+AGG | - | chr7_4:10488571-10488590 | Msa1139790:intron | 40.0% | |
| TGTGAACTTGTGGCTAGAAA+TGG | - | chr7_4:10488494-10488513 | Msa1139790:intron | 40.0% | |
| !!! | GTGGCTAGAAATGGTTTTGT+TGG | - | chr7_4:10488617-10488636 | Msa1139790:intron | 40.0% |
| TTGGTTAATCGAATCTCCGT+AGG | - | chr7_4:10488524-10488543 | Msa1139790:intron | 40.0% | |
| CTAATACGTCAATGCACTTG+GGG | - | chr7_4:10488717-10488736 | Msa1139790:intron | 40.0% | |
| GTTGTTACGATGTGAGGAGA+TGG | + | chr7_4:10485083-10485102 | None:intergenic | 45.0% | |
| TGAGGACCGAAAGAGAGAAA+CGG | + | chr7_4:10485163-10485182 | None:intergenic | 45.0% | |
| GCTATGCAACCAAATCTGTG+TGG | + | chr7_4:10485801-10485820 | None:intergenic | 45.0% | |
| AGGAGCTTCGTACAAAAAGG+AGG | + | chr7_4:10486346-10486365 | None:intergenic | 45.0% | |
| GAGAGGAGCTTCGTACAAAA+AGG | + | chr7_4:10486349-10486368 | None:intergenic | 45.0% | |
| ATTGAAGACGTTCGACCCAA+CGG | - | chr7_4:10486378-10486397 | Msa1139790:three_prime_UTR | 45.0% | |
| ! | GAATTTTTCTACGCCACCGT+TGG | + | chr7_4:10486397-10486416 | None:intergenic | 45.0% |
| AGGACAAGAAAAAGGAGAGG+AGG | + | chr7_4:10486635-10486654 | None:intergenic | 45.0% | |
| GAAAAAAGCAAAGAGGAGGG+AGG | + | chr7_4:10486655-10486674 | None:intergenic | 45.0% | |
| ACCGATAGCTGAGTTTGTCA+TGG | + | chr7_4:10486741-10486760 | None:intergenic | 45.0% | |
| TCAACAATGGTGCATTCTGC+TGG | + | chr7_4:10486881-10486900 | None:intergenic | 45.0% | |
| CGGCAAGCTTAAGAATTGCA+GGG | + | chr7_4:10487018-10487037 | None:intergenic | 45.0% | |
| TCGGCAAGCTTAAGAATTGC+AGG | + | chr7_4:10487019-10487038 | None:intergenic | 45.0% | |
| GCAATTCTTAAGCTTGCCGA+TGG | - | chr7_4:10487019-10487038 | Msa1139790:three_prime_UTR | 45.0% | |
| GTCAAGAACAGCAACTTCCT+CGG | + | chr7_4:10487131-10487150 | None:intergenic | 45.0% | |
| CATCATGTAAGCTTGGCTAC+CGG | + | chr7_4:10487176-10487195 | None:intergenic | 45.0% | |
| GGTAGCCAAGCTTACATGAT+GGG | - | chr7_4:10487175-10487194 | Msa1139790:three_prime_UTR | 45.0% | |
| CATCACCCATCATGTAAGCT+TGG | + | chr7_4:10487183-10487202 | None:intergenic | 45.0% | |
| !! | TGAAGCTTCTAGCTTAGCAC+TGG | + | chr7_4:10487239-10487258 | None:intergenic | 45.0% |
| TGCTAAGCTAGAAGCTTCAC+CGG | - | chr7_4:10487240-10487259 | Msa1139790:three_prime_UTR | 45.0% | |
| AAGACAGATGCATCTTCAGC+AGG | - | chr7_4:10487328-10487347 | Msa1139790:three_prime_UTR | 45.0% | |
| GCATAGCTGAATCCATCTTC+TGG | + | chr7_4:10487484-10487503 | None:intergenic | 45.0% | |
| !! | CTATGCAAGCTTTGAAGCAG+TGG | - | chr7_4:10487498-10487517 | Msa1139790:intron | 45.0% |
| !! | CTCTGAACGAACTTGTTGGA+AGG | - | chr7_4:10487542-10487561 | Msa1139790:intron | 45.0% |
| GCAGCCATCATTTCGAACAA+AGG | + | chr7_4:10487725-10487744 | None:intergenic | 45.0% | |
| !! | GGTCTACTCTGAAATGTTGC+TGG | - | chr7_4:10487755-10487774 | Msa1139790:intron | 45.0% |
| ! | TCTGAAATGTTGCTGGAGTG+AGG | - | chr7_4:10487762-10487781 | Msa1139790:intron | 45.0% |
| TGAGAACGAGGAGGAAGTTA+AGG | - | chr7_4:10487786-10487805 | Msa1139790:intron | 45.0% | |
| AAGTGTGTTTCCTGGTCCTA+CGG | + | chr7_4:10488543-10488562 | None:intergenic | 45.0% | |
| GTTTGTGTTTCCTGGTCCTA+CGG | + | chr7_4:10488655-10488674 | None:intergenic | 45.0% | |
| ! | ATCACGTGGTTTGTGTTTCC+TGG | + | chr7_4:10488663-10488682 | None:intergenic | 45.0% |
| ! | GACAGCATTGAGAACACATG+TGG | - | chr7_4:10488799-10488818 | Msa1139790:intron | 45.0% |
| ! | CACATGTGGCTCTCCTATTT+TGG | - | chr7_4:10488813-10488832 | Msa1139790:five_prime_UTR | 45.0% |
| !! | AAAAATAAAAATAAAAAACT+AGG | + | chr7_4:10486044-10486063 | None:intergenic | 5.0% |
| !! | ATTTATTTAGAAATATAATA+AGG | + | chr7_4:10487951-10487970 | None:intergenic | 5.0% |
| GAAACGGAGAGAAAGAGCGA+TGG | + | chr7_4:10485147-10485166 | None:intergenic | 50.0% | |
| GGGAGGACAAGAAAAAGGAG+AGG | + | chr7_4:10486638-10486657 | None:intergenic | 50.0% | |
| GAGGAGGGAGGACAAGAAAA+AGG | + | chr7_4:10486643-10486662 | None:intergenic | 50.0% | |
| TTCTCTGACCCTGCTGGATT+AGG | - | chr7_4:10486812-10486831 | Msa1139790:three_prime_UTR | 50.0% | |
| AAGCAATTTCGTAGTCCCGC+AGG | + | chr7_4:10486987-10487006 | None:intergenic | 50.0% | |
| GGAAAAGCTTCGATGAGGGA+AGG | + | chr7_4:10487110-10487129 | None:intergenic | 50.0% | |
| CCTCGGAAAAGCTTCGATGA+GGG | + | chr7_4:10487114-10487133 | None:intergenic | 50.0% | |
| TCCTCGGAAAAGCTTCGATG+AGG | + | chr7_4:10487115-10487134 | None:intergenic | 50.0% | |
| CGGTAGCCAAGCTTACATGA+TGG | - | chr7_4:10487174-10487193 | Msa1139790:three_prime_UTR | 50.0% | |
| TCAAGGCCATAGACAGCTTC+CGG | + | chr7_4:10487262-10487281 | None:intergenic | 50.0% | |
| GGCCTTGAAATGTGCATGAC+TGG | - | chr7_4:10487274-10487293 | Msa1139790:three_prime_UTR | 50.0% | |
| !! | TTCTGGGGTGACATGGATAG+TGG | + | chr7_4:10487467-10487486 | None:intergenic | 50.0% |
| ATCCATGTCACCCCAGAAGA+TGG | - | chr7_4:10487469-10487488 | Msa1139790:intron | 50.0% | |
| !! | ATCCATCTTCTGGGGTGACA+TGG | + | chr7_4:10487474-10487493 | None:intergenic | 50.0% |
| ATGATGGCTGCACATCTCCA+AGG | - | chr7_4:10487734-10487753 | Msa1139790:intron | 50.0% | |
| AATCGAATCTCCGTAGGACC+AGG | - | chr7_4:10488530-10488549 | Msa1139790:intron | 50.0% | |
| AATCGAATCTCCGTAGGACC+AGG | - | chr7_4:10488530-10488549 | Msa1139790:intron | 50.0% | |
| !! | ATGCACTTGGGGCATTTTCG+TGG | - | chr7_4:10488728-10488747 | Msa1139790:intron | 50.0% |
| !!! | GTGGCTCTCCTATTTTGGCT+TGG | - | chr7_4:10488818-10488837 | Msa1139790:five_prime_UTR | 50.0% |
| ! | GGTGTTTTCTCTGACCCTGC+TGG | - | chr7_4:10486806-10486825 | Msa1139790:three_prime_UTR | 55.0% |
| GGTCTTTGGACAATGCTCGG+AGG | + | chr7_4:10486838-10486857 | None:intergenic | 55.0% | |
| CGCGGAAGCTTCATCTTTCC+TGG | - | chr7_4:10487076-10487095 | Msa1139790:three_prime_UTR | 55.0% | |
| TGAGGGAAGGATTGAGCTCC+AGG | + | chr7_4:10487097-10487116 | None:intergenic | 55.0% | |
| ! | CCCTCATCGAAGCTTTTCCG+AGG | - | chr7_4:10487111-10487130 | Msa1139790:three_prime_UTR | 55.0% |
| GCTTCACCGGAAGCTGTCTA+TGG | - | chr7_4:10487253-10487272 | Msa1139790:three_prime_UTR | 55.0% | |
| CCTTGCGGGTACTCGATGAA+CGG | - | chr7_4:10487421-10487440 | Msa1139790:exon | 55.0% | |
| CTGGAGTGAGGATGAGAACG+AGG | - | chr7_4:10487774-10487793 | Msa1139790:intron | 55.0% | |
| GAGTGAGGATGAGAACGAGG+AGG | - | chr7_4:10487777-10487796 | Msa1139790:intron | 55.0% | |
| GAAGACGTTCGACCCAACGG+TGG | - | chr7_4:10486381-10486400 | Msa1139790:three_prime_UTR | 60.0% | |
| CTCGGAGGCCTAATCCAGCA+GGG | + | chr7_4:10486823-10486842 | None:intergenic | 60.0% | |
| CCGTTCATCGAGTACCCGCA+AGG | + | chr7_4:10487424-10487443 | None:intergenic | 60.0% | |
| GCTCGGAGGCCTAATCCAGC+AGG | + | chr7_4:10486824-10486843 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 10485073 | 10488924 | 10485073 | ID=Msa1139790;Name=Msa1139790 |
| chr7_4 | mRNA | 10485073 | 10488924 | 10485073 | ID=Msa1139790-mRNA-1;Parent=Msa1139790;Name=Msa1139790-mRNA-1;_AED=0.00;_eAED=0.00;_QI=215|1|1|1|0.25|0|5|1910|52 |
| chr7_4 | exon | 10485073 | 10485451 | 10485073 | ID=Msa1139790-mRNA-1:exon:2563;Parent=Msa1139790-mRNA-1 |
| chr7_4 | exon | 10485894 | 10487445 | 10485894 | ID=Msa1139790-mRNA-1:exon:2562;Parent=Msa1139790-mRNA-1 |
| chr7_4 | exon | 10487560 | 10487715 | 10487560 | ID=Msa1139790-mRNA-1:exon:2561;Parent=Msa1139790-mRNA-1 |
| chr7_4 | exon | 10488631 | 10488702 | 10488631 | ID=Msa1139790-mRNA-1:exon:2560;Parent=Msa1139790-mRNA-1 |
| chr7_4 | exon | 10488800 | 10488924 | 10488800 | ID=Msa1139790-mRNA-1:exon:2559;Parent=Msa1139790-mRNA-1 |
| chr7_4 | five_prime_UTR | 10488800 | 10488924 | 10488800 | ID=Msa1139790-mRNA-1:five_prime_utr;Parent=Msa1139790-mRNA-1 |
| chr7_4 | five_prime_UTR | 10488631 | 10488702 | 10488631 | ID=Msa1139790-mRNA-1:five_prime_utr;Parent=Msa1139790-mRNA-1 |
| chr7_4 | five_prime_UTR | 10487698 | 10487715 | 10487698 | ID=Msa1139790-mRNA-1:five_prime_utr;Parent=Msa1139790-mRNA-1 |
| chr7_4 | CDS | 10487560 | 10487697 | 10487560 | ID=Msa1139790-mRNA-1:cds;Parent=Msa1139790-mRNA-1 |
| chr7_4 | CDS | 10487425 | 10487445 | 10487425 | ID=Msa1139790-mRNA-1:cds;Parent=Msa1139790-mRNA-1 |
| chr7_4 | three_prime_UTR | 10485894 | 10487424 | 10485894 | ID=Msa1139790-mRNA-1:three_prime_utr;Parent=Msa1139790-mRNA-1 |
| chr7_4 | three_prime_UTR | 10485073 | 10485451 | 10485073 | ID=Msa1139790-mRNA-1:three_prime_utr;Parent=Msa1139790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
